View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6193_low_23 (Length: 203)

Name: NF6193_low_23
Description: NF6193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6193_low_23
NF6193_low_23
[»] chr6 (8 HSPs)
chr6 (11-192)||(23998182-23998363)
chr6 (11-192)||(16380539-16380720)
chr6 (11-192)||(16648135-16648316)
chr6 (11-191)||(1646980-1647160)
chr6 (11-182)||(14130413-14130584)
chr6 (11-192)||(16099943-16100130)
chr6 (11-103)||(23025912-23026004)
chr6 (22-166)||(14643664-14643805)
[»] scaffold0225 (1 HSPs)
scaffold0225 (11-192)||(25495-25676)
[»] scaffold0162 (2 HSPs)
scaffold0162 (11-192)||(15009-15190)
scaffold0162 (11-192)||(11198-11379)
[»] chr8 (11 HSPs)
chr8 (11-192)||(16875559-16875740)
chr8 (11-192)||(21848801-21848982)
chr8 (11-192)||(20650819-20651000)
chr8 (11-192)||(23155506-23155685)
chr8 (11-192)||(22436439-22436620)
chr8 (24-192)||(23902300-23902468)
chr8 (11-179)||(21195004-21195171)
chr8 (11-117)||(16414302-16414408)
chr8 (32-192)||(19869829-19869989)
chr8 (67-192)||(23887164-23887289)
chr8 (54-142)||(24631173-24631261)
[»] chr7 (10 HSPs)
chr7 (11-192)||(7825959-7826140)
chr7 (11-192)||(27105804-27105985)
chr7 (11-192)||(27172340-27172521)
chr7 (11-182)||(17925719-17925890)
chr7 (11-192)||(4441987-4442168)
chr7 (11-164)||(13378972-13379123)
chr7 (11-192)||(13458094-13458275)
chr7 (28-164)||(15716950-15717086)
chr7 (59-182)||(17143354-17143477)
chr7 (13-192)||(39178-39357)
[»] chr5 (7 HSPs)
chr5 (11-192)||(23507668-23507849)
chr5 (11-192)||(24583194-24583375)
chr5 (11-192)||(21935391-21935572)
chr5 (33-180)||(20250509-20250656)
chr5 (107-192)||(37541680-37541765)
chr5 (108-192)||(21409136-21409220)
chr5 (109-141)||(21337595-21337627)
[»] chr4 (4 HSPs)
chr4 (11-192)||(15291179-15291360)
chr4 (37-173)||(12340912-12341048)
chr4 (107-192)||(15323287-15323372)
chr4 (67-192)||(18547696-18547821)
[»] chr3 (9 HSPs)
chr3 (11-192)||(8272659-8272840)
chr3 (11-192)||(30139505-30139686)
chr3 (11-192)||(30149056-30149237)
chr3 (11-192)||(13965612-13965793)
chr3 (11-192)||(15611802-15611983)
chr3 (11-192)||(6151113-6151294)
chr3 (11-192)||(15948730-15948911)
chr3 (11-192)||(25768017-25768198)
chr3 (107-192)||(11889636-11889721)
[»] chr1 (8 HSPs)
chr1 (11-192)||(20829485-20829666)
chr1 (11-192)||(20927139-20927320)
chr1 (11-182)||(20527148-20527319)
chr1 (11-192)||(41215949-41216130)
chr1 (19-125)||(22133857-22133963)
chr1 (37-162)||(21200998-21201123)
chr1 (11-80)||(35930918-35930987)
chr1 (107-192)||(37679165-37679250)
[»] scaffold0076 (1 HSPs)
scaffold0076 (11-192)||(42359-42540)
[»] chr2 (9 HSPs)
chr2 (11-192)||(24829749-24829930)
chr2 (6-192)||(22279806-22279992)
chr2 (11-182)||(25130320-25130491)
chr2 (11-182)||(24568229-24568400)
chr2 (11-192)||(22760130-22760311)
chr2 (45-166)||(10037927-10038048)
chr2 (45-166)||(10098312-10098433)
chr2 (107-192)||(30010841-30010926)
chr2 (107-192)||(30209574-30209659)
[»] scaffold0302 (2 HSPs)
scaffold0302 (11-192)||(7254-7435)
scaffold0302 (11-192)||(312-493)
[»] scaffold0124 (1 HSPs)
scaffold0124 (11-192)||(5830-6013)
[»] scaffold0266 (1 HSPs)
scaffold0266 (11-192)||(7885-8066)
[»] scaffold0022 (1 HSPs)
scaffold0022 (11-192)||(8850-9031)
[»] scaffold0170 (1 HSPs)
scaffold0170 (11-192)||(34186-34367)
[»] scaffold0077 (1 HSPs)
scaffold0077 (11-192)||(26290-26471)
[»] scaffold0692 (1 HSPs)
scaffold0692 (11-192)||(1908-2089)
[»] scaffold0218 (2 HSPs)
scaffold0218 (11-192)||(1976-2157)
scaffold0218 (15-191)||(26429-26605)
[»] scaffold0120 (1 HSPs)
scaffold0120 (11-192)||(24277-24458)
[»] scaffold0610 (1 HSPs)
scaffold0610 (11-182)||(6953-7124)
[»] scaffold0369 (1 HSPs)
scaffold0369 (11-149)||(6888-7026)
[»] scaffold1488 (1 HSPs)
scaffold1488 (11-192)||(827-1008)
[»] scaffold0008 (2 HSPs)
scaffold0008 (11-192)||(132513-132694)
scaffold0008 (11-122)||(25938-26049)
[»] scaffold0561 (1 HSPs)
scaffold0561 (11-192)||(7029-7210)
[»] scaffold0467 (1 HSPs)
scaffold0467 (11-192)||(1645-1826)
[»] scaffold0876 (1 HSPs)
scaffold0876 (11-192)||(970-1151)
[»] scaffold0387 (1 HSPs)
scaffold0387 (11-192)||(16159-16340)
[»] scaffold0021 (3 HSPs)
scaffold0021 (11-192)||(21871-22052)
scaffold0021 (11-192)||(31447-31628)
scaffold0021 (69-192)||(7315-7438)
[»] scaffold0092 (1 HSPs)
scaffold0092 (22-192)||(208-378)
[»] scaffold0462 (1 HSPs)
scaffold0462 (11-115)||(2117-2221)
[»] scaffold0719 (1 HSPs)
scaffold0719 (33-95)||(4785-4847)
[»] scaffold0635 (1 HSPs)
scaffold0635 (45-166)||(9022-9143)
[»] scaffold0465 (1 HSPs)
scaffold0465 (11-69)||(13649-13707)
[»] scaffold0058 (2 HSPs)
scaffold0058 (23-86)||(76630-76693)
scaffold0058 (76-192)||(27337-27453)
[»] scaffold0026 (1 HSPs)
scaffold0026 (107-165)||(50938-50996)
[»] scaffold0647 (1 HSPs)
scaffold0647 (107-192)||(3000-3085)
[»] scaffold0309 (1 HSPs)
scaffold0309 (107-192)||(11894-11979)
[»] scaffold0083 (1 HSPs)
scaffold0083 (67-192)||(9114-9239)
[»] scaffold0270 (2 HSPs)
scaffold0270 (109-141)||(6023-6055)
scaffold0270 (109-141)||(13153-13185)


Alignment Details
Target: chr6 (Bit Score: 158; Significance: 3e-84; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 23998363 - 23998182
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
23998363 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 23998264  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
23998263 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 23998182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 16380539 - 16380720
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
16380539 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16380638  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
16380639 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 16380720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 16648135 - 16648316
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
16648135 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16648234  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
16648235 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 16648316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 11 - 191
Target Start/End: Original strand, 1646980 - 1647160
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
1646980 atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 1647079  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatga 191  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||    
1647080 tgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatga 1647160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 14130584 - 14130413
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||| ||||||||  ||| ||    
14130584 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggatactatgagtattatgtgatgtcatttggattatccaa 14130485  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgtt 182  Q
    || || ||||||||| |||||||| ||||||| || ||||||||| ||| |||| |||||||| ||||||||    
14130484 tgtgctaggtgtcttcatggaatatatgaatagaacatttcatccttatttggaccgttttgtggtggtgtt 14130413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 16100130 - 16099943
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||| ||| |||||||||||||||||||||||  |||| |||||||||||||||||||||||||||| ||| |||||||||||||  |||||    
16100130 atcatcagattatagtgaaggcggaagatatatccaaaacatcgttacgaacgaggtatggacactatgagtattatgtaatgccatttggagtgtctaa 16100031  T
111 tgcgccaggtgtct------ttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    || |||||||||||      ||||||| || ||||||| |||||||||||| ||| |||| |||||||| |||||||| || ||||||    
16100030 tgtgccaggtgtctttatctttatggagtatatgaatagaatatttcatccatatttggaccgttttgtggtggtgtttatagatgat 16099943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 23025912 - 23026004
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggag 103  Q
    |||||||||||||||| |||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||    
23025912 atcatcagattagagtgaaggcggaagatatatccaaaactacgtctcgaacgaggtatggacactatgagtattctgtgatgccatttggag 23026004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 14643664 - 14643805
Alignment:
22 agagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtg 121  Q
    ||||| ||| |||| ||||| ||||| ||||| |||||||| || ||||||||||  || |||||||||||||||||||| |   || ||||||  ||||    
14643664 agagtgaagacggaggatatttccaagactgcattccgaactagatatggacact--ga-tattctgtgatgccatttggtgttactgatgcgcatggtg 14643760  T
122 tctttatggaatacatgaataaaatatttcatccctatctggatc 166  Q
    |||| |||||||| ||||||| ||| || ||||| ||| ||||||    
14643761 tcttcatggaatatatgaatagaatcttccatccttatttggatc 14643805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 154; Significance: 7e-82; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 25676 - 25495
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
25676 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 25577  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
25576 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 25495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 154; Significance: 7e-82; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 15190 - 15009
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
15190 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15091  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
15090 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 15009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 11198 - 11379
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||| |||||||||||||||  |||||    
11198 atcatcagattagagtgaaggcggaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctttgatgccatttggagtgtctaa 11297  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
11298 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 11379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 154; Significance: 7e-82; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 16875559 - 16875740
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
16875559 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16875658  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
16875659 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 16875740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 21848801 - 21848982
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
21848801 atcatcagattagagtaaaggcgaaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 21848900  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
21848901 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 21848982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 20650819 - 20651000
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
20650819 atcatcaaattagagtaaaggcagaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20650918  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||||||||||||||| || || || ||||||| ||||||| |||| |||||||| |||||||| ||||||||||| ||||||    
20650919 tgcgccaggtgtcttcatagagtatatgaatagaatattttatccttatctggaccgttttgtagtggtgttcatagatgat 20651000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 23155506 - 23155685
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||| | ||    
23155506 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagcacccaa 23155603  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||||| ||||||||| |||||||| ||||||| |||||||||||| ||| |||| |||||||| |||||||| |||||||||    
23155604 tgcgctaggtgtcttcatggaatatatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttattgatgat 23155685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 22436620 - 22436439
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||| |||||||| || |||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||| ||    
22436620 atcatcatattagagtgaaagcggaagatatatccaaaaccgcgttccgaacaaggtatggacagtatgagtattctgtgatgccatttggagtatccaa 22436521  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||||||||||||||| |||||||| ||||||| |||||||||||| |||||||| |||||||| |||||||| || ||||||    
22436520 tgcgccaggtgtcttaatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgat 22436439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 24 - 192
Target Start/End: Complemental strand, 23902468 - 23902300
Alignment:
24 agtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtc 123  Q
    |||||||| |||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||| ||||| | |||||||    
23902468 agtaaaggtggaagatatatccaaaaccgcgttccaaacgaggcatggacactatgagtattctgtgatgccatttggagtatccaatgcactaggtgtc 23902369  T
124 tttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    || |||||||| ||||||| |||||||||||| | |||||| |||||| | || ||||| || ||||||    
23902368 ttcatggaatatatgaatagaatatttcatccttttctggaccgttttatggtagtgtttatcgatgat 23902300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 11 - 179
Target Start/End: Original strand, 21195004 - 21195171
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||| | |||||| ||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||| |||||||| |||||||| || |||    
21195004 atcatcataatagagtgaaggcggaagatatatccaaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgcaatttggagtatataa 21195103  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggt 179  Q
    || |||||||  ||| |||||||| ||||||| |||||||||||| |||||||| |||||||| |||||    
21195104 tgtgccaggt-acttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggt 21195171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 16414408 - 16414302
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||| | ||||| |||||  ||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||  ||| ||    
16414408 atcatcatactagaggaaaggtagaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctgtgatgccatttggaatatccaa 16414309  T
111 tgcgcca 117  Q
    |||||||    
16414308 tgcgcca 16414302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 192
Target Start/End: Complemental strand, 19869989 - 19869829
Alignment:
32 cggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatgga 131  Q
    ||||||||||||| || ||||| ||| ||||  | ||||| || ||||||||||| |||||||| |||||||  || || |||||||| || ||||||||    
19869989 cggaagatatatcgaagactgccttcagaacccgttatggtcattatgagtattcagtgatgccttttggagtgtccaacgcgccaggagtgtttatgga 19869890  T
132 atacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
     || ||||| | ||| || ||||| ||| | ||||  || ||||| || ||||||||||||    
19869889 gtatatgaacagaattttccatccgtatttagatcagttcgttgtagtattcattgatgat 19869829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 23887289 - 23887164
Alignment:
67 tatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatc 166  Q
    |||||||| || |||||||| |||||||| || || |   |||||||||||| ||| |||||||| ||||||||| | || |||||| | ||| | ||||    
23887289 tatggacattacgagtattcagtgatgcctttcggtgttactaatgcgccagatgtgtttatggagtacatgaatcatatttttcatgcttatttagatc 23887190  T
167 gttttgttgtggtgttcattgatgat 192  Q
    | || || || |||||||| ||||||    
23887189 gcttcgtggttgtgttcatcgatgat 23887164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 142
Target Start/End: Original strand, 24631173 - 24631261
Alignment:
54 gttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaatacatgaata 142  Q
    |||| |||| |||||| | ||||||||||||||||| ||| ||||||| |   |||||| || |||  | |||||||||||||||||||    
24631173 gttctgaactaggtatagtcactatgagtattctgtaatgtcatttggtgtgactaatgtgctaggattatttatggaatacatgaata 24631261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 154; Significance: 7e-82; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 7826140 - 7825959
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
7826140 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 7826041  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
7826040 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 7825959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 27105804 - 27105985
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
27105804 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 27105903  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
27105904 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 27105985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 27172521 - 27172340
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
27172521 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 27172422  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
27172421 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 27172340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 17925890 - 17925719
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||| ||| ||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||| ||    
17925890 atcatcagattagagtgaagacggaagatatatccaaaaccgcgtttcgaatgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 17925791  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgtt 182  Q
    ||||||||||||||| |||||||| ||||||| |||||||||||| | ||| || |||||||| ||||||||    
17925790 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatccttttctagaccgttttgtggtggtgtt 17925719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 4442168 - 4441987
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||| |||||| |||||||||||||||||||| |||| ||| ||    
4442168 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccggtcgaggtatgaacactaagagtattctgtgatgccattcggagtatccaa 4442069  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||||||||||||||| |||||||| ||||||| |||||| ||||| | |||||| |||||||| |||||||| || ||||||    
4442068 tgcgccaggtgtcttcatggaatatatgaatataatattccatccttttctggaccgttttgtggtggtgtttatagatgat 4441987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 164
Target Start/End: Complemental strand, 13379123 - 13378972
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||| ||| ||    
13379123 atcatcagatcagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagtatccaa 13379026  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctgga 164  Q
    ||||||||||||||| ||| |||| ||||||| |||||||||||| ||||||||    
13379025 tgcgccaggtgtcttcatgaaatatatgaatagaatatttcatccttatctgga 13378972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 13458275 - 13458094
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||| |||||||||| |||||| ||||||||||| |||| | ||||||||| |||||||||||||||||||||| ||||||| ||||||||| ||| ||    
13458275 atcattagattagagtgaaggcgaaagatatatccgaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgtcatttggagtatccaa 13458176  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||||||||||||||| |||||||| ||||||| || ||| ||||| | || |||||||||||| |||||||| || ||||||    
13458175 tgcgccaggtgtcttcatggaatatatgaatagaacattccatccttttcaggatcgttttgtggtggtgtttatcgatgat 13458094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 28 - 164
Target Start/End: Original strand, 15716950 - 15717086
Alignment:
28 aaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtcttta 127  Q
    |||||||| |||||||||||||||||||||||||| || ||||| |||||||| |||||||| |||||||||||   | |||||| |||  ||||||| |    
15716950 aaggcggaggatatatccaaaactgcgttccgaactagatatggtcactatgaatattctgtaatgccatttggtctaactaatgtgcctagtgtcttca 15717049  T
128 tggaatacatgaataaaatatttcatccctatctgga 164  Q
    ||||||| ||||||| |||||| ||||| | ||||||    
15717050 tggaatatatgaatagaatattccatccttttctgga 15717086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 182
Target Start/End: Original strand, 17143354 - 17143477
Alignment:
59 gaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatcccta 158  Q
    |||||||||||||||||||||| ||||||| |||| ||||||| |   ||||| |||| |||||||| |||||||| ||||||| ||| || ||||| ||    
17143354 gaacgaggtatggacactatgaatattctgcgatgtcatttggtgtgactaatacgcccggtgtcttcatggaatatatgaatagaatcttccatcctta 17143453  T
159 tctggatcgttttgttgtggtgtt 182  Q
    | ||||||  ||||| ||||||||    
17143454 tttggatcagtttgtggtggtgtt 17143477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 39178 - 39357
Alignment:
13 catcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatg 112  Q
    ||||||||  |||| ||| ||||||||||||  || ||||| ||| ||||  | ||||| || ||||||||||| |||||||| |||||||  || || |    
39178 catcagatacgagtgaagtcggaagatatattgaagactgccttcagaacccgttatggtcattatgagtattcggtgatgccttttggagtgtccaacg 39277  T
113 cgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||||||| || |||||||| || ||||| | ||| || ||||| ||| | ||||  || ||||| || ||||||||||||    
39278 cgccaggagtttttatggagtatatgaacagaattttccatccatatttagatcagttcgttgtagtattcattgatgat 39357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 154; Significance: 7e-82; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 23507849 - 23507668
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
23507849 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 23507750  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
23507749 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 23507668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 24583375 - 24583194
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
24583375 atcatcagattagagtaaaggcaaaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24583276  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
24583275 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 24583194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 21935391 - 21935572
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
21935391 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 21935490  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
21935491 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 21935572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 33 - 180
Target Start/End: Original strand, 20250509 - 20250656
Alignment:
33 ggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaa 132  Q
    ||||||||| || || |||||||| ||||| ||||||||||| |||||||||| | | ||||||||||| | | |||| | | |||||  ||||||||||    
20250509 ggaagatatttctaagactgcgtttcgaacaaggtatggacattatgagtattttattatgccatttggtgtaactaacgtgtcaggtaactttatggaa 20250608  T
133 tacatgaataaaatatttcatccctatctggatcgttttgttgtggtg 180  Q
    || |||||||  || || ||||| ||| ||||||  ||||| ||||||    
20250609 tatatgaataggattttccatccttatttggatcaatttgtggtggtg 20250656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 37541680 - 37541765
Alignment:
107 ctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||| ||||| ||||||||||||||||||  ||| || ||| ||| |||||||   ||||||||||| || |||||||||    
37541680 ctaatgcgcctggtgtttttatggaatacatgaatcgaattttccatgcctttctggataagtttgttgtggtatttattgatgat 37541765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 21409220 - 21409136
Alignment:
108 taatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||||| || ||||||||||| ||||||   || |||||| | ||||| |||||||||||||| ||||| || ||||||    
21409220 taatgcgccaggagtatttatggaatatatgaattgtatttttcatacttatctagatcgttttgttgttgtgtttatagatgat 21409136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 141
Target Start/End: Original strand, 21337595 - 21337627
Alignment:
109 aatgcgccaggtgtctttatggaatacatgaat 141  Q
    |||||||||||||| ||||||||||||||||||    
21337595 aatgcgccaggtgtgtttatggaatacatgaat 21337627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 154; Significance: 7e-82; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 15291179 - 15291360
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
15291179 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15291278  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||| ||||||||||| ||||||    
15291279 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccttatctggaccattttgtggtggtgttcatagatgat 15291360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 37 - 173
Target Start/End: Original strand, 12340912 - 12341048
Alignment:
37 gatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaataca 136  Q
    |||||||||||||| |||||||||||  || ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| |||||||| |    
12340912 gatatatccaaaaccgcgttccgaacagggaatggacactatgagtattctgtgatgccatttggagtgactaatgcgccaggtgtcttcatggaatata 12341011  T
137 tgaataaaatatttcatccctatctggatcgttttgt 173  Q
    ||||||  ||||| ||||| | ||||||  |||||||    
12341012 tgaataggatattccatccttttctggactgttttgt 12341048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 15323372 - 15323287
Alignment:
107 ctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||| ||||| ||||||||||||||||||| ||| || ||| | |||||||||   ||||| || ||||| |||||||||    
15323372 ctaatgcgcctggtgtgtttatggaatacatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatgat 15323287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 18547696 - 18547821
Alignment:
67 tatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatc 166  Q
    ||||| || ||||||||||| |||| ||| || |||   ||||| |||||||| || |||||||| || ||||| | ||| || ||||| ||| | ||||    
18547696 tatggtcattatgagtattcggtgaagcctttcggaatgtctaacgcgccaggagtgtttatggagtatatgaacagaatcttccatccgtatttagatc 18547795  T
167 gttttgttgtggtgttcattgatgat 192  Q
      ||||||||||| ||||||||||||    
18547796 agtttgttgtggtattcattgatgat 18547821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 154; Significance: 7e-82; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 8272659 - 8272840
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
8272659 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 8272758  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
8272759 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 8272840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 30139686 - 30139505
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
30139686 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 30139587  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
30139586 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 30139505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 30149237 - 30149056
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
30149237 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 30149138  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
30149137 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 30149056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 13965612 - 13965793
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
13965612 atcatcagattagagtaaaggcggtagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 13965711  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
13965712 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 13965793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 15611983 - 15611802
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
15611983 atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15611884  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||| |||||||||||||||||||| ||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
15611883 tgcaccaggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 15611802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 6151113 - 6151294
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
6151113 atcatcagattagagtgaaggcagaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 6151212  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||||||||||||||||||||| || |||||||||||||||||||| ||||| || |||||||| |||||||| || ||||||    
6151213 tgcgccaggtgtctttatggagtatatgaataaaatatttcatccttatctagaccgttttgtggtggtgtttatagatgat 6151294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 15948730 - 15948911
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||    
15948730 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattccgtgatgccatttggagtatccaa 15948829  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| ||| |||| || ||||| ||||| ||||| ||||||    
15948830 tgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatttggaccgatttgtggtggttttcatagatgat 15948911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 25768198 - 25768017
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||| || || || |||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||| |||| ||||||    
25768198 atcatcagattagagtgaaagcagatgatatatccaaaaccgcgttccaaacaaggtatggacactatgagtattctgtgatgccattcggagtatctaa 25768099  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    | ||||||||||||| |||||||| ||||||| |||||||||||| |||||||| |||||||| |||||||| || ||||||    
25768098 ttcgccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgat 25768017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 11889636 - 11889721
Alignment:
107 ctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||||||||| || |||||||||||||||   || |||||| | ||| | ||||| || || || |||||||||||||||    
11889636 ctaatgcgccaggtgtgttcatggaatacatgaatcgtatttttcatgcgtatttagatcgcttcgtggttgtgttcattgatgat 11889721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 154; Significance: 7e-82; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 20829485 - 20829666
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
20829485 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20829584  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
20829585 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 20829666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 20927320 - 20927139
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
20927320 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20927221  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||  ||||||| ||||||||||| ||||||    
20927220 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacagttttgtggtggtgttcatagatgat 20927139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 20527319 - 20527148
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||| ||||||||| ||||| ||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
20527319 atcatctgattagagtgaaggcagaagataaatccaaaaccgcattccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20527220  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgtt 182  Q
    ||| |||||||||||||| ||||||||||||| |||||||||||| |||||||| |||||||| ||||||||    
20527219 tgcaccaggtgtctttatagaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtt 20527148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 41215949 - 41216130
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||| |||| | |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||    
41215949 atcatcagattagagtgaaggtgtaagatatatccaaaaccgcgttccgaacgaggtatggaaactatgagtattctgtgatgccatttggagtatccaa 41216048  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||||| || ||| |||| ||||||| |||||||||||| | |||||| |||||| | |||||||| |||||||||    
41216049 tgcgccaggtgttttcatgcaatatatgaatagaatatttcatccttttctggaccgttttatggtggtgtttattgatgat 41216130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 22133857 - 22133963
Alignment:
19 attagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccag 118  Q
    ||||||||||||||||||||||||||||| || |||||  ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
22133857 attagagtaaaggcggaagatatatccaagaccgcgttatgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcgccag 22133956  T
119 gtgtctt 125  Q
    |||||||    
22133957 gtgtctt 22133963  T

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Target: chr1; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 37 - 162
Target Start/End: Original strand, 21200998 - 21201123
Alignment:
37 gatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaataca 136  Q
    ||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| | |   ||||| ||||  ||||||| |||||||| |    
21200998 gatatatccaaaactgcgttccgaacgagatatggtcactatgaatattctgtgatgccatttagtgtgactaatacgccgagtgtcttcatggaatata 21201097  T
137 tgaataaaatatttcatccctatctg 162  Q
    |||||| |||||||||||| ||||||    
21201098 tgaatagaatatttcatccttatctg 21201123  T

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Target: chr1; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 35930918 - 35930987
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatga 80  Q
    |||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||    
35930918 atcatcagattagagtgaaggcggaagatatatccaaaaccacgttccgaacgaggtatggacactatga 35930987  T

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Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 37679250 - 37679165
Alignment:
107 ctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||| ||||| |||||||| |||||||||  ||| || ||| | | |||||||   |||||||||||||| |||||||||    
37679250 ctaatgcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctggataagtttgttgtggtgtttattgatgat 37679165  T

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Target: scaffold0076 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 42540 - 42359
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
42540 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 42441  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
42440 tgcgctaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 42359  T

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Target: chr2 (Bit Score: 150; Significance: 2e-79; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 24829749 - 24829930
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
24829749 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24829848  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
24829849 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 24829930  T

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Target: chr2; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 6 - 192
Target Start/End: Complemental strand, 22279992 - 22279806
Alignment:
6 tggacatcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagca 105  Q
    |||| |||||||||| ||||||||| | ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
22279992 tggatatcatcagatcagagtaaagactgaatatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagta 22279893  T
106 tctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||||| |||||||||||||||||||||||| ||||||| |||| |||||||| |||||||| ||||||||||| ||||||    
22279892 tctaatgcgccatgtgtctttatggaatacatgaatagaatattttatccttatctggaccgttttgtggtggtgttcatagatgat 22279806  T

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Target: chr2; HSP #3
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 25130491 - 25130320
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||    
25130491 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgccatttggagtatccaa 25130392  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgtt 182  Q
    |||||||||||||||  ||||||| ||||||| |||||||||||| |  ||||| || ||||| ||||||||    
25130391 tgcgccaggtgtcttcctggaatatatgaatagaatatttcatcctttcctggaccgctttgtggtggtgtt 25130320  T

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Target: chr2; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 182
Target Start/End: Original strand, 24568229 - 24568400
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||| |||||||| |||||||||||||||||||||||  |||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||    
24568229 atcatcatattagagtgaaggcggaagatatatccaaaaccacgttccaaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24568328  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgtt 182  Q
    |||  |||||||||| ||||| || ||||||| |||||||||||| |||||||| |||||||| ||| ||||    
24568329 tgcatcaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtgttgtt 24568400  T

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Target: chr2; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 22760130 - 22760311
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||| |||||||| ||||||||||||||||||||||| | ||||  ||| |||||||||||||||||||||||||||||||||||||||| |||  |    
22760130 atcatcatattagagtgaaggcggaagatatatccaaaaccgtgttcaaaacaaggtatggacactatgagtattctgtgatgccatttggagtatccga 22760229  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||||| ||||||||| ||||| || ||||||| |||||||||||| || ||||| |||||||| |||||||| || ||||||    
22760230 tgcgctaggtgtcttcatggagtatatgaatagaatatttcatccttacctggaccgttttgtggtggtgtttatagatgat 22760311  T

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Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 166
Target Start/End: Original strand, 10037927 - 10038048
Alignment:
45 caaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaatacatgaataaa 144  Q
    ||||||||| || |||||||||||||| |||||||| || | ||||||| ||||||| |   |||||||||  |||||||| |||||||||||||||| |    
10037927 caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga 10038026  T
145 atatttcatccctatctggatc 166  Q
    || || ||||| ||| ||||||    
10038027 atcttccatccttatttggatc 10038048  T

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Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 166
Target Start/End: Original strand, 10098312 - 10098433
Alignment:
45 caaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaatacatgaataaa 144  Q
    ||||||||| || |||||||||||||| |||||||| || | ||||||| ||||||| |   |||||||||  |||||||| |||||||||||||||| |    
10098312 caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga 10098411  T
145 atatttcatccctatctggatc 166  Q
    || || ||||| ||| ||||||    
10098412 atcttccatccttatttggatc 10098433  T

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Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 30010841 - 30010926
Alignment:
107 ctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||||||||||||| || |||||| |||| ||||||   || |||||| | |||||||||||||||||||| ||||| || ||||||    
30010841 ctaatgcgccaggagtgtttatgaaatatatgaatcgtatttttcatacttatctggatcgttttgttgtcgtgtttatagatgat 30010926  T

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Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 30209574 - 30209659
Alignment:
107 ctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||  || || ||||||||||| |||||| | || |||||| | |||||||||||||||||||| ||||| || ||||||    
30209574 ctaatgcgctgggagtgtttatggaatatatgaatcatatttttcatacttatctggatcgttttgttgttgtgtttatagatgat 30209659  T

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Target: scaffold0302 (Bit Score: 142; Significance: 1e-74; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 7435 - 7254
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
7435 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaa 7336  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||||| ||||||||||||||||||| |||||||||||| |||||||| |||||||| |||||||| || ||||||    
7335 tgcgccaggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgat 7254  T

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Target: scaffold0302; HSP #2
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 493 - 312
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
493 atcaccagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaa 394  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||||| ||||||||||||||||||| |||||||||||| |||||||| |||||||| |||||||| || ||||||    
393 tgcgccaggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgat 312  T

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Target: scaffold0124 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 5830 - 6013
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
5830 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 5929  T
111 tgcgccaggtgtcttta-tggaatacatgaataa-aatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||||||||||||||||| || ||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
5930 tgcgccaggtgtctttattgaaatacatgaataagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 6013  T

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Target: scaffold0266 (Bit Score: 138; Significance: 2e-72; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 7885 - 8066
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
7885 atcatcagattagagtaaaggcgaaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 7984  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||| | |||||||| || ||||||    
7985 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttttggtggtgtttatagatgat 8066  T

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Target: scaffold0022 (Bit Score: 134; Significance: 6e-70; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 8850 - 9031
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||| || |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
8850 atcatcagataagggtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 8949  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||| |||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||  |||||||||| ||||||    
8950 tgcaccaggtgtctttatgggatacatgaatagaatatttcatccttatctggatcgttttgtgatggtgttcatagatgat 9031  T

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Target: scaffold0170 (Bit Score: 130; Significance: 1e-67; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 34367 - 34186
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
34367 atcatcagattagagtaaaggcggaagatatacccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 34268  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||||||||||||||| ||||| || ||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
34267 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 34186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 130; Significance: 1e-67; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 26290 - 26471
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
26290 atcatcagattagagtgaaggcggaagagatatccaaaaccgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 26389  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||||||||| |||||| |||||||| | |||||||||| |||||||| |||||||| ||||||||||| ||||||    
26390 tgcgccaggtgtctttctggaatgcatgaatagagtatttcatccttatctggaccgttttgtggtggtgttcatagatgat 26471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 122; Significance: 9e-63; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 1908 - 2089
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||||||||| ||||||    
1908 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttctgatcgaggtatggacactatgagtattcggtgatgccatttggagtatctaa 2007  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||| ||||||||||| ||||| || ||||||| |||||||||||| ||||||||  ||||||| ||||||||||| ||||||    
2008 tgcaccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggactgttttgtggtggtgttcatagatgat 2089  T

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Target: scaffold0218 (Bit Score: 122; Significance: 9e-63; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 1976 - 2157
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||| |||||||| ||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
1976 atcatcaaattagagtgaaggcggaagatatatccaaaaccgcattccgaacgaggtatagacactatgagtattctgtgatgccatttggagtatctaa 2075  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||| |||||||||||||||||||| ||||||| |||||||||||| |||||||| | |||||| |||||||| || ||||||    
2076 tgcaccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccattttgtggtggtgttaatagatgat 2157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 15 - 191
Target Start/End: Complemental strand, 26605 - 26429
Alignment:
15 tcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcg 114  Q
    |||||| ||||| |||||||||||||||||||| || || |||||||| |||||||||||||||||||||||||||||| ||||| ||| ||||||||||    
26605 tcagatgagagtgaaggcggaagatatatccaataccgctttccgaacaaggtatggacactatgagtattctgtgatgtcatttagagtatctaatgcg 26506  T
115 ccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatga 191  Q
    ||||||||||| |||||||| ||||||| |||||||||||| | |||||| |||||||| ||| |||| ||| ||||    
26505 ccaggtgtcttcatggaatatatgaatagaatatttcatccttttctggaccgttttgtggtgatgtttatttatga 26429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 122; Significance: 9e-63; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 24458 - 24277
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||| ||    
24458 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacaaggtatggacactatgagtatgctgtgatgccatttggagtatcgaa 24359  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||||| |||||||||| |||| || ||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||||    
24358 tgcgctaggtgtctttgtggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat 24277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 11 - 182
Target Start/End: Original strand, 6953 - 7124
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
6953 atcatcagattagagtgaaggcggaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 7052  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgtt 182  Q
    ||| ||||||||||| || || || |||||||||||||||||||| |||||||| |||||| | ||||||||    
7053 tgcaccaggtgtcttcattgagtatatgaataaaatatttcatccttatctggaccgttttatggtggtgtt 7124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 119; Significance: 5e-61; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 11 - 149
Target Start/End: Complemental strand, 7026 - 6888
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
7026 atcatcagattagagtaaaggcggaagatatattcaaaacttcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 6927  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatt 149  Q
    ||| |||||||||||||||||||||||||||| ||||||    
6926 tgcaccaggtgtctttatggaatacatgaatagaatatt 6888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1488 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 827 - 1008
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||    
827 atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatgaacactatgagtattctgtgatgccatttggagtatccaa 926  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||| |||||| |||||||| ||||||| |||||||||||| ||| |||| | |||||| |||||||| || ||||||    
927 tgcgccagttgtcttcatggaatatatgaatagaatatttcatccttatttggaccattttgtggtggtgtttatagatgat 1008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 118; Significance: 2e-60; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 132513 - 132694
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||||||||| |||||||||||| |||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||    
132513 atcatcagattagagtaaaggctgaagatatatcccaaaccgcgttccgaacgagatatggacactatgagtactctgtgatgccatttggagtatctaa 132612  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||| ||||||||||||||||||||||||| ||||||| |||| ||||||||  ||||||| ||||| || || ||||||    
132613 tgcgcccggtgtctttatggaatacatgaatagaatattttatccttatctggactgttttgtggtggtctttatagatgat 132694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 26049 - 25938
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||| ||||||||| ||||||||||||||||||| ||| ||||||| ||||| |||||||||||||||||||||||||||||||||| ||| ||  ||    
26049 atcatccgattagagtgaaggcggaagatatatccataaccgcgttccaaacgaagtatggacactatgagtattctgtgatgccatttagagtatgcaa 25950  T
111 tgcgccaggtgt 122  Q
    ||||||||||||    
25949 tgcgccaggtgt 25938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 114; Significance: 5e-58; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 7029 - 7210
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||| |||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||| ||    
7029 atcatcatattagagtgaaggcggaagatatatccaaaacagcgttccaaacgaggtatggacactatgggtattctgtgatgccatttggagtatccaa 7128  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||| |||| |||||||| ||||||| |||||||||||| ||| |||| |||||||| |||||||| || ||||||    
7129 tgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatatggaccgttttgtggtggtgtttatagatgat 7210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 114; Significance: 5e-58; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 1645 - 1826
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||| ||||| |||||| |||||||||| ||||||||||| ||||||||| ||||||||||||| || |||||||||||||  || ||    
1645 atcatcagattagagtgaaggcagaagatgtatccaaaaccgcgttccgaacaaggtatggaaactatgagtattccgtaatgccatttggagtttccaa 1744  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| |||||||| || ||||||    
1745 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgat 1826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 970 - 1151
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||| ||||||||||||||| | |||||   ||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||    
970 atcatcagattagagtgaaggcggaagatatacctaaaaccatgttccgaacgaggtatggacactatgagtattctgtgatgccatttgcagtatccaa 1069  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||| |||| |||||||| ||||||| |||||||||||| |||||||| |||||| | |||||||| || ||||||    
1070 tgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatctggaccgttttatggtggtgtttatagatgat 1151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 16340 - 16159
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||| |||||| | || |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||    
16340 atcatcaaattagaatgaatgcggaagatatatctaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccattttgagtatccaa 16241  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||| |||||||||| |||||||||||||||| ||||||||| || |||||||| |||||||| ||| |||| || ||||||    
16240 tgcgtcaggtgtcttcatggaatacatgaatagaatatttcaaccttatctggaccgttttgtggtgatgtttatagatgat 16159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 102; Significance: 7e-51; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 21871 - 22052
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||| |||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||  || ||| ||    
21871 atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaa 21970  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||| ||||||||||| |||||||| ||||||| |||||||||||| ||||||||  ||||||| ||||| || || ||||||    
21971 tgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtggtggtttttatagatgat 22052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 31447 - 31628
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    ||||||| |||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||  || ||| ||    
31447 atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaa 31546  T
111 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||| ||||||||||| |||||||| ||||||| |||||||||||| ||||||||  ||||||| ||||| || || ||||||    
31547 tgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtggtggtttttatagatgat 31628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 7438 - 7315
Alignment:
69 tggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgt 168  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||| || ||||||| |||||||||||| |||||| | |||    
7438 tggacactatgagtattatgtgatgccatttggagtatctaatgcgccaggtgtcttcatggagtatatgaatataatatttcatccttatctgaaccgt 7339  T
169 tttgttgtggtgttcattgatgat 192  Q
    ||||| |||| |||||| ||||||    
7338 tttgtggtggagttcatagatgat 7315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 378 - 208
Alignment:
22 agagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtg 121  Q
    ||||| ||||||||| ||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
378 agagtgaaggcggaatatatatccaaaatcgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtg 279  T
122 tctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||| || || || ||||||| |||||||||||| |||||| |  ||||||| |||||||| || ||||||    
278 tcttcatagagtatatgaatagaatatttcatccttatctgtactgttttgtggtggtgtttatagatgat 208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 2221 - 2117
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa 110  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
2221 atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattatgtgatgccatttggagtatctaa 2122  T
111 tgcgc 115  Q
    |||||    
2121 tgcgc 2117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0719 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0719
Description:

Target: scaffold0719; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 4847 - 4785
Alignment:
33 ggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgcc 95  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
4847 ggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgcc 4785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 166
Target Start/End: Complemental strand, 9143 - 9022
Alignment:
45 caaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaatacatgaataaa 144  Q
    ||||||||| || |||||||||||||| |||||||| || | ||||||| ||||||| |   |||||||||  |||||||| |||||||||||||||| |    
9143 caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga 9044  T
145 atatttcatccctatctggatc 166  Q
    || || ||||| ||| ||||||    
9043 atcttccatccttatttggatc 9022  T

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Target: scaffold0465 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 13649 - 13707
Alignment:
11 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtat 69  Q
    |||||||||||| ||| |||||  |||||||||||||||| ||||||||||||||||||    
13649 atcatcagattacagtgaaggcaaaagatatatccaaaaccgcgttccgaacgaggtat 13707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 32; Significance: 0.000000004; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 76693 - 76630
Alignment:
23 gagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattc 86  Q
    |||||||||||||  |||||||||||||||| ||||| || || |||||||||| ||| |||||    
76693 gagtaaaggcggagtatatatccaaaactgcattccggactagatatggacactttgaatattc 76630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 192
Target Start/End: Original strand, 27337 - 27453
Alignment:
76 tatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttg 175  Q
    ||||| |||||||||||||| || || |   |||||||||| || || ||| ||||||| ||||||   || |||||| | ||||| |||||||||||||    
27337 tatgaatattctgtgatgcctttcggtgttactaatgcgccgggagtatttgtggaatatatgaatcgtatttttcatacttatctagatcgttttgttg 27436  T
176 tggtgttcattgatgat 192  Q
    | ||||| || ||||||    
27437 ttgtgtttatagatgat 27453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 165
Target Start/End: Complemental strand, 50996 - 50938
Alignment:
107 ctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggat 165  Q
    |||||||||| ||||| |||||||| || ||||||| ||| |||||| |||||||||||    
50996 ctaatgcgcctggtgtgtttatggagtatatgaatagaatttttcatgcctatctggat 50938  T

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Target: scaffold0647 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 3085 - 3000
Alignment:
107 ctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    ||||||| || ||||| ||||||||||||||||||   || |||||| | ||| |||||||||| || || |||||||| ||||||    
3085 ctaatgcaccgggtgtatttatggaatacatgaatcgtatttttcatgcttatttggatcgtttcgtggttgtgttcatcgatgat 3000  T

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Target: scaffold0309 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 11979 - 11894
Alignment:
107 ctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat 192  Q
    |||||||||| ||||| |||||||| || ||||| | ||| |||||| |||||||||||   ||||| || ||||| |||||||||    
11979 ctaatgcgcctggtgtgtttatggagtatatgaacagaatttttcatgcctatctggataaatttgtggttgtgtttattgatgat 11894  T

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Target: scaffold0083 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 9114 - 9239
Alignment:
67 tatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatc 166  Q
    |||||||| ||||| ||||| |||||||| || || |   | |||||||||||||| |||||||| |||||||||   || |||||| | ||| | ||||    
9114 tatggacattatgaatattcagtgatgcctttcggtgttacaaatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttagatc 9213  T
167 gttttgttgtggtgttcattgatgat 192  Q
    |||| || || |||||||| ||||||    
9214 gtttcgtggttgtgttcatggatgat 9239  T

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Target: scaffold0270 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 141
Target Start/End: Complemental strand, 6055 - 6023
Alignment:
109 aatgcgccaggtgtctttatggaatacatgaat 141  Q
    |||||||||||||| ||||||||||||||||||    
6055 aatgcgccaggtgtgtttatggaatacatgaat 6023  T

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Target: scaffold0270; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 141
Target Start/End: Complemental strand, 13185 - 13153
Alignment:
109 aatgcgccaggtgtctttatggaatacatgaat 141  Q
    |||||||||||||| ||||||||||||||||||    
13185 aatgcgccaggtgtgtttatggaatacatgaat 13153  T

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