View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6193_low_23 (Length: 203)
Name: NF6193_low_23
Description: NF6193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6193_low_23 |
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| [»] scaffold0225 (1 HSPs) |
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| [»] scaffold0162 (2 HSPs) |
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| [»] scaffold0076 (1 HSPs) |
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| [»] scaffold0302 (2 HSPs) |
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| [»] scaffold0124 (1 HSPs) |
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| [»] scaffold0266 (1 HSPs) |
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| [»] scaffold0022 (1 HSPs) |
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| [»] scaffold0170 (1 HSPs) |
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| [»] scaffold0077 (1 HSPs) |
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| [»] scaffold0692 (1 HSPs) |
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| [»] scaffold0218 (2 HSPs) |
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| [»] scaffold0120 (1 HSPs) |
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| [»] scaffold0610 (1 HSPs) |
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| [»] scaffold0369 (1 HSPs) |
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| [»] scaffold1488 (1 HSPs) |
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| [»] scaffold0008 (2 HSPs) |
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| [»] scaffold0561 (1 HSPs) |
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| [»] scaffold0467 (1 HSPs) |
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| [»] scaffold0876 (1 HSPs) |
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| [»] scaffold0387 (1 HSPs) |
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| [»] scaffold0021 (3 HSPs) |
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| [»] scaffold0092 (1 HSPs) |
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| [»] scaffold0462 (1 HSPs) |
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| [»] scaffold0719 (1 HSPs) |
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| [»] scaffold0635 (1 HSPs) |
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| [»] scaffold0465 (1 HSPs) |
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| [»] scaffold0058 (2 HSPs) |
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| [»] scaffold0026 (1 HSPs) |
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| [»] scaffold0647 (1 HSPs) |
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| [»] scaffold0309 (1 HSPs) |
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| [»] scaffold0083 (1 HSPs) |
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| [»] scaffold0270 (2 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 158; Significance: 3e-84; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 23998363 - 23998182
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
23998363 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
23998264 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
23998263 |
tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
23998182 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 16380539 - 16380720
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
16380539 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
16380638 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
16380639 |
tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
16380720 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 16648135 - 16648316
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
16648135 |
atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
16648234 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
16648235 |
tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
16648316 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 11 - 191
Target Start/End: Original strand, 1646980 - 1647160
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
1646980 |
atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
1647079 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatga |
191 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||||||||||| |||||||| |||||||| ||||||||||| ||||| |
|
|
| T |
1647080 |
tgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatga |
1647160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 14130584 - 14130413
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||| |||||||| ||| || |
|
|
| T |
14130584 |
atcatcagattagagtgaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggatactatgagtattatgtgatgtcatttggattatccaa |
14130485 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgtt |
182 |
Q |
| |
|
|| || ||||||||| |||||||| ||||||| || ||||||||| ||| |||| |||||||| |||||||| |
|
|
| T |
14130484 |
tgtgctaggtgtcttcatggaatatatgaatagaacatttcatccttatttggaccgttttgtggtggtgtt |
14130413 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 16100130 - 16099943
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||| ||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||| ||||||||||||| ||||| |
|
|
| T |
16100130 |
atcatcagattatagtgaaggcggaagatatatccaaaacatcgttacgaacgaggtatggacactatgagtattatgtaatgccatttggagtgtctaa |
16100031 |
T |
 |
| Q |
111 |
tgcgccaggtgtct------ttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|| ||||||||||| ||||||| || ||||||| |||||||||||| ||| |||| |||||||| |||||||| || |||||| |
|
|
| T |
16100030 |
tgtgccaggtgtctttatctttatggagtatatgaatagaatatttcatccatatttggaccgttttgtggtggtgtttatagatgat |
16099943 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 23025912 - 23026004
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggag |
103 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23025912 |
atcatcagattagagtgaaggcggaagatatatccaaaactacgtctcgaacgaggtatggacactatgagtattctgtgatgccatttggag |
23026004 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 14643664 - 14643805
Alignment:
| Q |
22 |
agagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtg |
121 |
Q |
| |
|
||||| ||| |||| ||||| ||||| ||||| |||||||| || |||||||||| || |||||||||||||||||||| | || |||||| |||| |
|
|
| T |
14643664 |
agagtgaagacggaggatatttccaagactgcattccgaactagatatggacact--ga-tattctgtgatgccatttggtgttactgatgcgcatggtg |
14643760 |
T |
 |
| Q |
122 |
tctttatggaatacatgaataaaatatttcatccctatctggatc |
166 |
Q |
| |
|
|||| |||||||| ||||||| ||| || ||||| ||| |||||| |
|
|
| T |
14643761 |
tcttcatggaatatatgaatagaatcttccatccttatttggatc |
14643805 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0225 (Bit Score: 154; Significance: 7e-82; HSPs: 1)
Name: scaffold0225
Description:
Target: scaffold0225; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 25676 - 25495
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
25676 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
25577 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
25576 |
tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
25495 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0162 (Bit Score: 154; Significance: 7e-82; HSPs: 2)
Name: scaffold0162
Description:
Target: scaffold0162; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 15190 - 15009
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
15190 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
15091 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
15090 |
tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
15009 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0162; HSP #2
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 11198 - 11379
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
11198 |
atcatcagattagagtgaaggcggaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctttgatgccatttggagtgtctaa |
11297 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
11298 |
tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
11379 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 154; Significance: 7e-82; HSPs: 11)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 16875559 - 16875740
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
16875559 |
atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
16875658 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
16875659 |
tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
16875740 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 21848801 - 21848982
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
21848801 |
atcatcagattagagtaaaggcgaaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
21848900 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
21848901 |
tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
21848982 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 20650819 - 20651000
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
20650819 |
atcatcaaattagagtaaaggcagaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
20650918 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||||||||||||||| || || || ||||||| ||||||| |||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
20650919 |
tgcgccaggtgtcttcatagagtatatgaatagaatattttatccttatctggaccgttttgtagtggtgttcatagatgat |
20651000 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 23155506 - 23155685
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| | || |
|
|
| T |
23155506 |
atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagcacccaa |
23155603 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||||| ||||||||| |||||||| ||||||| |||||||||||| ||| |||| |||||||| |||||||| ||||||||| |
|
|
| T |
23155604 |
tgcgctaggtgtcttcatggaatatatgaatagaatatttcatccttatttggaccgttttgtggtggtgtttattgatgat |
23155685 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 22436620 - 22436439
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||| |||||||| || |||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||| || |
|
|
| T |
22436620 |
atcatcatattagagtgaaagcggaagatatatccaaaaccgcgttccgaacaaggtatggacagtatgagtattctgtgatgccatttggagtatccaa |
22436521 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| |||||||||||| |||||||| |||||||| |||||||| || |||||| |
|
|
| T |
22436520 |
tgcgccaggtgtcttaatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgat |
22436439 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 24 - 192
Target Start/End: Complemental strand, 23902468 - 23902300
Alignment:
| Q |
24 |
agtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtc |
123 |
Q |
| |
|
|||||||| |||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||| ||||| | ||||||| |
|
|
| T |
23902468 |
agtaaaggtggaagatatatccaaaaccgcgttccaaacgaggcatggacactatgagtattctgtgatgccatttggagtatccaatgcactaggtgtc |
23902369 |
T |
 |
| Q |
124 |
tttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|| |||||||| ||||||| |||||||||||| | |||||| |||||| | || ||||| || |||||| |
|
|
| T |
23902368 |
ttcatggaatatatgaatagaatatttcatccttttctggaccgttttatggtagtgtttatcgatgat |
23902300 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 11 - 179
Target Start/End: Original strand, 21195004 - 21195171
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||| | |||||| ||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||| |||||||| |||||||| || ||| |
|
|
| T |
21195004 |
atcatcataatagagtgaaggcggaagatatatccaaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgcaatttggagtatataa |
21195103 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggt |
179 |
Q |
| |
|
|| ||||||| ||| |||||||| ||||||| |||||||||||| |||||||| |||||||| ||||| |
|
|
| T |
21195104 |
tgtgccaggt-acttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggt |
21195171 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 16414408 - 16414302
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||| | ||||| ||||| ||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||| ||| || |
|
|
| T |
16414408 |
atcatcatactagaggaaaggtagaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctgtgatgccatttggaatatccaa |
16414309 |
T |
 |
| Q |
111 |
tgcgcca |
117 |
Q |
| |
|
||||||| |
|
|
| T |
16414308 |
tgcgcca |
16414302 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 192
Target Start/End: Complemental strand, 19869989 - 19869829
Alignment:
| Q |
32 |
cggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatgga |
131 |
Q |
| |
|
||||||||||||| || ||||| ||| |||| | ||||| || ||||||||||| |||||||| ||||||| || || |||||||| || |||||||| |
|
|
| T |
19869989 |
cggaagatatatcgaagactgccttcagaacccgttatggtcattatgagtattcagtgatgccttttggagtgtccaacgcgccaggagtgtttatgga |
19869890 |
T |
 |
| Q |
132 |
atacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|| ||||| | ||| || ||||| ||| | |||| || ||||| || |||||||||||| |
|
|
| T |
19869889 |
gtatatgaacagaattttccatccgtatttagatcagttcgttgtagtattcattgatgat |
19869829 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 192
Target Start/End: Complemental strand, 23887289 - 23887164
Alignment:
| Q |
67 |
tatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatc |
166 |
Q |
| |
|
|||||||| || |||||||| |||||||| || || | |||||||||||| ||| |||||||| ||||||||| | || |||||| | ||| | |||| |
|
|
| T |
23887289 |
tatggacattacgagtattcagtgatgcctttcggtgttactaatgcgccagatgtgtttatggagtacatgaatcatatttttcatgcttatttagatc |
23887190 |
T |
 |
| Q |
167 |
gttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
| || || || |||||||| |||||| |
|
|
| T |
23887189 |
gcttcgtggttgtgttcatcgatgat |
23887164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 142
Target Start/End: Original strand, 24631173 - 24631261
Alignment:
| Q |
54 |
gttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaatacatgaata |
142 |
Q |
| |
|
|||| |||| |||||| | ||||||||||||||||| ||| ||||||| | |||||| || ||| | ||||||||||||||||||| |
|
|
| T |
24631173 |
gttctgaactaggtatagtcactatgagtattctgtaatgtcatttggtgtgactaatgtgctaggattatttatggaatacatgaata |
24631261 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 154; Significance: 7e-82; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 7826140 - 7825959
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
7826140 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
7826041 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
7826040 |
tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
7825959 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 27105804 - 27105985
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
27105804 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
27105903 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
27105904 |
tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
27105985 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 27172521 - 27172340
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
27172521 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
27172422 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
27172421 |
tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
27172340 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 17925890 - 17925719
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||| || |
|
|
| T |
17925890 |
atcatcagattagagtgaagacggaagatatatccaaaaccgcgtttcgaatgaggtatggacactatgagtattctgtgatgccatttggagtatccaa |
17925791 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgtt |
182 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| |||||||||||| | ||| || |||||||| |||||||| |
|
|
| T |
17925790 |
tgcgccaggtgtcttcatggaatatatgaatagaatatttcatccttttctagaccgttttgtggtggtgtt |
17925719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 4442168 - 4441987
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||| |||||||||||||||||||| |||| ||| || |
|
|
| T |
4442168 |
atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccggtcgaggtatgaacactaagagtattctgtgatgccattcggagtatccaa |
4442069 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| |||||| ||||| | |||||| |||||||| |||||||| || |||||| |
|
|
| T |
4442068 |
tgcgccaggtgtcttcatggaatatatgaatataatattccatccttttctggaccgttttgtggtggtgtttatagatgat |
4441987 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 164
Target Start/End: Complemental strand, 13379123 - 13378972
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| || |
|
|
| T |
13379123 |
atcatcagatcagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagtatccaa |
13379026 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctgga |
164 |
Q |
| |
|
||||||||||||||| ||| |||| ||||||| |||||||||||| |||||||| |
|
|
| T |
13379025 |
tgcgccaggtgtcttcatgaaatatatgaatagaatatttcatccttatctgga |
13378972 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 13458275 - 13458094
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||| |||||||||| |||||| ||||||||||| |||| | ||||||||| |||||||||||||||||||||| ||||||| ||||||||| ||| || |
|
|
| T |
13458275 |
atcattagattagagtgaaggcgaaagatatatccgaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgtcatttggagtatccaa |
13458176 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| || ||| ||||| | || |||||||||||| |||||||| || |||||| |
|
|
| T |
13458175 |
tgcgccaggtgtcttcatggaatatatgaatagaacattccatccttttcaggatcgttttgtggtggtgtttatcgatgat |
13458094 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 28 - 164
Target Start/End: Original strand, 15716950 - 15717086
Alignment:
| Q |
28 |
aaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtcttta |
127 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| || ||||| |||||||| |||||||| ||||||||||| | |||||| ||| ||||||| | |
|
|
| T |
15716950 |
aaggcggaggatatatccaaaactgcgttccgaactagatatggtcactatgaatattctgtaatgccatttggtctaactaatgtgcctagtgtcttca |
15717049 |
T |
 |
| Q |
128 |
tggaatacatgaataaaatatttcatccctatctgga |
164 |
Q |
| |
|
||||||| ||||||| |||||| ||||| | |||||| |
|
|
| T |
15717050 |
tggaatatatgaatagaatattccatccttttctgga |
15717086 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 182
Target Start/End: Original strand, 17143354 - 17143477
Alignment:
| Q |
59 |
gaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatcccta |
158 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||| ||||||| | ||||| |||| |||||||| |||||||| ||||||| ||| || ||||| || |
|
|
| T |
17143354 |
gaacgaggtatggacactatgaatattctgcgatgtcatttggtgtgactaatacgcccggtgtcttcatggaatatatgaatagaatcttccatcctta |
17143453 |
T |
 |
| Q |
159 |
tctggatcgttttgttgtggtgtt |
182 |
Q |
| |
|
| |||||| ||||| |||||||| |
|
|
| T |
17143454 |
tttggatcagtttgtggtggtgtt |
17143477 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 39178 - 39357
Alignment:
| Q |
13 |
catcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatg |
112 |
Q |
| |
|
|||||||| |||| ||| |||||||||||| || ||||| ||| |||| | ||||| || ||||||||||| |||||||| ||||||| || || | |
|
|
| T |
39178 |
catcagatacgagtgaagtcggaagatatattgaagactgccttcagaacccgttatggtcattatgagtattcggtgatgccttttggagtgtccaacg |
39277 |
T |
 |
| Q |
113 |
cgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||||||| || |||||||| || ||||| | ||| || ||||| ||| | |||| || ||||| || |||||||||||| |
|
|
| T |
39278 |
cgccaggagtttttatggagtatatgaacagaattttccatccatatttagatcagttcgttgtagtattcattgatgat |
39357 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 154; Significance: 7e-82; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 23507849 - 23507668
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
23507849 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
23507750 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
23507749 |
tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
23507668 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 24583375 - 24583194
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
24583375 |
atcatcagattagagtaaaggcaaaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
24583276 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
24583275 |
tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
24583194 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 21935391 - 21935572
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
21935391 |
atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
21935490 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
21935491 |
tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
21935572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 33 - 180
Target Start/End: Original strand, 20250509 - 20250656
Alignment:
| Q |
33 |
ggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaa |
132 |
Q |
| |
|
||||||||| || || |||||||| ||||| ||||||||||| |||||||||| | | ||||||||||| | | |||| | | ||||| |||||||||| |
|
|
| T |
20250509 |
ggaagatatttctaagactgcgtttcgaacaaggtatggacattatgagtattttattatgccatttggtgtaactaacgtgtcaggtaactttatggaa |
20250608 |
T |
 |
| Q |
133 |
tacatgaataaaatatttcatccctatctggatcgttttgttgtggtg |
180 |
Q |
| |
|
|| ||||||| || || ||||| ||| |||||| ||||| |||||| |
|
|
| T |
20250609 |
tatatgaataggattttccatccttatttggatcaatttgtggtggtg |
20250656 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 37541680 - 37541765
Alignment:
| Q |
107 |
ctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||| ||| || ||| ||| ||||||| ||||||||||| || ||||||||| |
|
|
| T |
37541680 |
ctaatgcgcctggtgtttttatggaatacatgaatcgaattttccatgcctttctggataagtttgttgtggtatttattgatgat |
37541765 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 21409220 - 21409136
Alignment:
| Q |
108 |
taatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||||| || ||||||||||| |||||| || |||||| | ||||| |||||||||||||| ||||| || |||||| |
|
|
| T |
21409220 |
taatgcgccaggagtatttatggaatatatgaattgtatttttcatacttatctagatcgttttgttgttgtgtttatagatgat |
21409136 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 141
Target Start/End: Original strand, 21337595 - 21337627
Alignment:
| Q |
109 |
aatgcgccaggtgtctttatggaatacatgaat |
141 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |
|
|
| T |
21337595 |
aatgcgccaggtgtgtttatggaatacatgaat |
21337627 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 154; Significance: 7e-82; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 15291179 - 15291360
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
15291179 |
atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
15291278 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||| ||||||||||| |||||| |
|
|
| T |
15291279 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccttatctggaccattttgtggtggtgttcatagatgat |
15291360 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 37 - 173
Target Start/End: Original strand, 12340912 - 12341048
Alignment:
| Q |
37 |
gatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaataca |
136 |
Q |
| |
|
|||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| | |
|
|
| T |
12340912 |
gatatatccaaaaccgcgttccgaacagggaatggacactatgagtattctgtgatgccatttggagtgactaatgcgccaggtgtcttcatggaatata |
12341011 |
T |
 |
| Q |
137 |
tgaataaaatatttcatccctatctggatcgttttgt |
173 |
Q |
| |
|
|||||| ||||| ||||| | |||||| ||||||| |
|
|
| T |
12341012 |
tgaataggatattccatccttttctggactgttttgt |
12341048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 15323372 - 15323287
Alignment:
| Q |
107 |
ctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||| ||| || ||| | ||||||||| ||||| || ||||| ||||||||| |
|
|
| T |
15323372 |
ctaatgcgcctggtgtgtttatggaatacatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatgat |
15323287 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 18547696 - 18547821
Alignment:
| Q |
67 |
tatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatc |
166 |
Q |
| |
|
||||| || ||||||||||| |||| ||| || ||| ||||| |||||||| || |||||||| || ||||| | ||| || ||||| ||| | |||| |
|
|
| T |
18547696 |
tatggtcattatgagtattcggtgaagcctttcggaatgtctaacgcgccaggagtgtttatggagtatatgaacagaatcttccatccgtatttagatc |
18547795 |
T |
 |
| Q |
167 |
gttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||||||||||| |||||||||||| |
|
|
| T |
18547796 |
agtttgttgtggtattcattgatgat |
18547821 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 154; Significance: 7e-82; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 8272659 - 8272840
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
8272659 |
atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
8272758 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
8272759 |
tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
8272840 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 30139686 - 30139505
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
30139686 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
30139587 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
30139586 |
tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
30139505 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 30149237 - 30149056
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
30149237 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
30149138 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
30149137 |
tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
30149056 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 13965612 - 13965793
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |
|
|
| T |
13965612 |
atcatcagattagagtaaaggcggtagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa |
13965711 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
13965712 |
tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
13965793 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 15611983 - 15611802
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
15611983 |
atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
15611884 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||| |||||||||||||||||||| ||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
15611883 |
tgcaccaggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
15611802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 6151113 - 6151294
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
6151113 |
atcatcagattagagtgaaggcagaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa |
6151212 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||||||||||| ||||| || |||||||| |||||||| || |||||| |
|
|
| T |
6151213 |
tgcgccaggtgtctttatggagtatatgaataaaatatttcatccttatctagaccgttttgtggtggtgtttatagatgat |
6151294 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 15948730 - 15948911
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| || |
|
|
| T |
15948730 |
atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattccgtgatgccatttggagtatccaa |
15948829 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||||||||||| ||| |||| || ||||| ||||| ||||| |||||| |
|
|
| T |
15948830 |
tgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatttggaccgatttgtggtggttttcatagatgat |
15948911 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 25768198 - 25768017
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||| || || || |||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
25768198 |
atcatcagattagagtgaaagcagatgatatatccaaaaccgcgttccaaacaaggtatggacactatgagtattctgtgatgccattcggagtatctaa |
25768099 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
| ||||||||||||| |||||||| ||||||| |||||||||||| |||||||| |||||||| |||||||| || |||||| |
|
|
| T |
25768098 |
ttcgccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgat |
25768017 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 11889636 - 11889721
Alignment:
| Q |
107 |
ctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||| || |||||| | ||| | ||||| || || || ||||||||||||||| |
|
|
| T |
11889636 |
ctaatgcgccaggtgtgttcatggaatacatgaatcgtatttttcatgcgtatttagatcgcttcgtggttgtgttcattgatgat |
11889721 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 154; Significance: 7e-82; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 20829485 - 20829666
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
20829485 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
20829584 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
20829585 |
tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
20829666 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 20927320 - 20927139
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
20927320 |
atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
20927221 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||| ||||||||||| |||||| |
|
|
| T |
20927220 |
tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacagttttgtggtggtgttcatagatgat |
20927139 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 20527319 - 20527148
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||| ||||||||| ||||| ||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
20527319 |
atcatctgattagagtgaaggcagaagataaatccaaaaccgcattccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
20527220 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgtt |
182 |
Q |
| |
|
||| |||||||||||||| ||||||||||||| |||||||||||| |||||||| |||||||| |||||||| |
|
|
| T |
20527219 |
tgcaccaggtgtctttatagaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtt |
20527148 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 41215949 - 41216130
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||| |||| | |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| || |
|
|
| T |
41215949 |
atcatcagattagagtgaaggtgtaagatatatccaaaaccgcgttccgaacgaggtatggaaactatgagtattctgtgatgccatttggagtatccaa |
41216048 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||||| || ||| |||| ||||||| |||||||||||| | |||||| |||||| | |||||||| ||||||||| |
|
|
| T |
41216049 |
tgcgccaggtgttttcatgcaatatatgaatagaatatttcatccttttctggaccgttttatggtggtgtttattgatgat |
41216130 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 22133857 - 22133963
Alignment:
| Q |
19 |
attagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccag |
118 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
22133857 |
attagagtaaaggcggaagatatatccaagaccgcgttatgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcgccag |
22133956 |
T |
 |
| Q |
119 |
gtgtctt |
125 |
Q |
| |
|
||||||| |
|
|
| T |
22133957 |
gtgtctt |
22133963 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 37 - 162
Target Start/End: Original strand, 21200998 - 21201123
Alignment:
| Q |
37 |
gatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaataca |
136 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| | | ||||| |||| ||||||| |||||||| | |
|
|
| T |
21200998 |
gatatatccaaaactgcgttccgaacgagatatggtcactatgaatattctgtgatgccatttagtgtgactaatacgccgagtgtcttcatggaatata |
21201097 |
T |
 |
| Q |
137 |
tgaataaaatatttcatccctatctg |
162 |
Q |
| |
|
|||||| |||||||||||| |||||| |
|
|
| T |
21201098 |
tgaatagaatatttcatccttatctg |
21201123 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 35930918 - 35930987
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatga |
80 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
35930918 |
atcatcagattagagtgaaggcggaagatatatccaaaaccacgttccgaacgaggtatggacactatga |
35930987 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 37679250 - 37679165
Alignment:
| Q |
107 |
ctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||||||| ||| || ||| | | ||||||| |||||||||||||| ||||||||| |
|
|
| T |
37679250 |
ctaatgcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctggataagtttgttgtggtgtttattgatgat |
37679165 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0076 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0076
Description:
Target: scaffold0076; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 42540 - 42359
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
42540 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa |
42441 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
42440 |
tgcgctaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
42359 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 150; Significance: 2e-79; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 24829749 - 24829930
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
24829749 |
atcatcagattagagtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
24829848 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
24829849 |
tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
24829930 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 6 - 192
Target Start/End: Complemental strand, 22279992 - 22279806
Alignment:
| Q |
6 |
tggacatcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagca |
105 |
Q |
| |
|
|||| |||||||||| ||||||||| | ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
22279992 |
tggatatcatcagatcagagtaaagactgaatatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagta |
22279893 |
T |
 |
| Q |
106 |
tctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| ||||||| |||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
22279892 |
tctaatgcgccatgtgtctttatggaatacatgaatagaatattttatccttatctggaccgttttgtggtggtgttcatagatgat |
22279806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 25130491 - 25130320
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| || |
|
|
| T |
25130491 |
atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgccatttggagtatccaa |
25130392 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgtt |
182 |
Q |
| |
|
||||||||||||||| ||||||| ||||||| |||||||||||| | ||||| || ||||| |||||||| |
|
|
| T |
25130391 |
tgcgccaggtgtcttcctggaatatatgaatagaatatttcatcctttcctggaccgctttgtggtggtgtt |
25130320 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 182
Target Start/End: Original strand, 24568229 - 24568400
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
24568229 |
atcatcatattagagtgaaggcggaagatatatccaaaaccacgttccaaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
24568328 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgtt |
182 |
Q |
| |
|
||| |||||||||| ||||| || ||||||| |||||||||||| |||||||| |||||||| ||| |||| |
|
|
| T |
24568329 |
tgcatcaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtgttgtt |
24568400 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 22760130 - 22760311
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||| | |||| ||| |||||||||||||||||||||||||||||||||||||||| ||| | |
|
|
| T |
22760130 |
atcatcatattagagtgaaggcggaagatatatccaaaaccgtgttcaaaacaaggtatggacactatgagtattctgtgatgccatttggagtatccga |
22760229 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||||| ||||||||| ||||| || ||||||| |||||||||||| || ||||| |||||||| |||||||| || |||||| |
|
|
| T |
22760230 |
tgcgctaggtgtcttcatggagtatatgaatagaatatttcatccttacctggaccgttttgtggtggtgtttatagatgat |
22760311 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 166
Target Start/End: Original strand, 10037927 - 10038048
Alignment:
| Q |
45 |
caaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaatacatgaataaa |
144 |
Q |
| |
|
||||||||| || |||||||||||||| |||||||| || | ||||||| ||||||| | ||||||||| |||||||| |||||||||||||||| | |
|
|
| T |
10037927 |
caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga |
10038026 |
T |
 |
| Q |
145 |
atatttcatccctatctggatc |
166 |
Q |
| |
|
|| || ||||| ||| |||||| |
|
|
| T |
10038027 |
atcttccatccttatttggatc |
10038048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 166
Target Start/End: Original strand, 10098312 - 10098433
Alignment:
| Q |
45 |
caaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaatacatgaataaa |
144 |
Q |
| |
|
||||||||| || |||||||||||||| |||||||| || | ||||||| ||||||| | ||||||||| |||||||| |||||||||||||||| | |
|
|
| T |
10098312 |
caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga |
10098411 |
T |
 |
| Q |
145 |
atatttcatccctatctggatc |
166 |
Q |
| |
|
|| || ||||| ||| |||||| |
|
|
| T |
10098412 |
atcttccatccttatttggatc |
10098433 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 30010841 - 30010926
Alignment:
| Q |
107 |
ctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||||||||||||| || |||||| |||| |||||| || |||||| | |||||||||||||||||||| ||||| || |||||| |
|
|
| T |
30010841 |
ctaatgcgccaggagtgtttatgaaatatatgaatcgtatttttcatacttatctggatcgttttgttgtcgtgtttatagatgat |
30010926 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 30209574 - 30209659
Alignment:
| Q |
107 |
ctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||||||||| || || ||||||||||| |||||| | || |||||| | |||||||||||||||||||| ||||| || |||||| |
|
|
| T |
30209574 |
ctaatgcgctgggagtgtttatggaatatatgaatcatatttttcatacttatctggatcgttttgttgttgtgtttatagatgat |
30209659 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0302 (Bit Score: 142; Significance: 1e-74; HSPs: 2)
Name: scaffold0302
Description:
Target: scaffold0302; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 7435 - 7254
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
7435 |
atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaa |
7336 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| |||||||||||| |||||||| |||||||| |||||||| || |||||| |
|
|
| T |
7335 |
tgcgccaggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgat |
7254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0302; HSP #2
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 493 - 312
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
493 |
atcaccagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaa |
394 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| |||||||||||| |||||||| |||||||| |||||||| || |||||| |
|
|
| T |
393 |
tgcgccaggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgat |
312 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0124 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0124
Description:
Target: scaffold0124; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 5830 - 6013
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
5830 |
atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
5929 |
T |
 |
| Q |
111 |
tgcgccaggtgtcttta-tggaatacatgaataa-aatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||||||||||||||||| || ||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
5930 |
tgcgccaggtgtctttattgaaatacatgaataagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
6013 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0266 (Bit Score: 138; Significance: 2e-72; HSPs: 1)
Name: scaffold0266
Description:
Target: scaffold0266; HSP #1
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 7885 - 8066
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
7885 |
atcatcagattagagtaaaggcgaaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
7984 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||| | |||||||| || |||||| |
|
|
| T |
7985 |
tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttttggtggtgtttatagatgat |
8066 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 134; Significance: 6e-70; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 8850 - 9031
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||| || |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
8850 |
atcatcagataagggtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
8949 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||| |||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||| |||||||||| |||||| |
|
|
| T |
8950 |
tgcaccaggtgtctttatgggatacatgaatagaatatttcatccttatctggatcgttttgtgatggtgttcatagatgat |
9031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0170 (Bit Score: 130; Significance: 1e-67; HSPs: 1)
Name: scaffold0170
Description:
Target: scaffold0170; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 34367 - 34186
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| || |
|
|
| T |
34367 |
atcatcagattagagtaaaggcggaagatatacccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa |
34268 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||||||||||||||| ||||| || ||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
34267 |
tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
34186 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0077 (Bit Score: 130; Significance: 1e-67; HSPs: 1)
Name: scaffold0077
Description:
Target: scaffold0077; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 26290 - 26471
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
26290 |
atcatcagattagagtgaaggcggaagagatatccaaaaccgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa |
26389 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||||||||| |||||| |||||||| | |||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
26390 |
tgcgccaggtgtctttctggaatgcatgaatagagtatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
26471 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0692 (Bit Score: 122; Significance: 9e-63; HSPs: 1)
Name: scaffold0692
Description:
Target: scaffold0692; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 1908 - 2089
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
1908 |
atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttctgatcgaggtatggacactatgagtattcggtgatgccatttggagtatctaa |
2007 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||| ||||||||||| ||||| || ||||||| |||||||||||| |||||||| ||||||| ||||||||||| |||||| |
|
|
| T |
2008 |
tgcaccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggactgttttgtggtggtgttcatagatgat |
2089 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0218 (Bit Score: 122; Significance: 9e-63; HSPs: 2)
Name: scaffold0218
Description:
Target: scaffold0218; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 1976 - 2157
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
1976 |
atcatcaaattagagtgaaggcggaagatatatccaaaaccgcattccgaacgaggtatagacactatgagtattctgtgatgccatttggagtatctaa |
2075 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||| |||||||||||||||||||| ||||||| |||||||||||| |||||||| | |||||| |||||||| || |||||| |
|
|
| T |
2076 |
tgcaccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccattttgtggtggtgttaatagatgat |
2157 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0218; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 15 - 191
Target Start/End: Complemental strand, 26605 - 26429
Alignment:
| Q |
15 |
tcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcg |
114 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||| || || |||||||| |||||||||||||||||||||||||||||| ||||| ||| |||||||||| |
|
|
| T |
26605 |
tcagatgagagtgaaggcggaagatatatccaataccgctttccgaacaaggtatggacactatgagtattctgtgatgtcatttagagtatctaatgcg |
26506 |
T |
 |
| Q |
115 |
ccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatga |
191 |
Q |
| |
|
||||||||||| |||||||| ||||||| |||||||||||| | |||||| |||||||| ||| |||| ||| |||| |
|
|
| T |
26505 |
ccaggtgtcttcatggaatatatgaatagaatatttcatccttttctggaccgttttgtggtgatgtttatttatga |
26429 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0120 (Bit Score: 122; Significance: 9e-63; HSPs: 1)
Name: scaffold0120
Description:
Target: scaffold0120; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 24458 - 24277
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||| || |
|
|
| T |
24458 |
atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacaaggtatggacactatgagtatgctgtgatgccatttggagtatcgaa |
24359 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||||| |||||||||| |||| || ||||||| |||||||||||| |||||||| |||||||| ||||||||||| |||||| |
|
|
| T |
24358 |
tgcgctaggtgtctttgtggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgat |
24277 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0610 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: scaffold0610
Description:
Target: scaffold0610; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 11 - 182
Target Start/End: Original strand, 6953 - 7124
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |
|
|
| T |
6953 |
atcatcagattagagtgaaggcggaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa |
7052 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgtt |
182 |
Q |
| |
|
||| ||||||||||| || || || |||||||||||||||||||| |||||||| |||||| | |||||||| |
|
|
| T |
7053 |
tgcaccaggtgtcttcattgagtatatgaataaaatatttcatccttatctggaccgttttatggtggtgtt |
7124 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0369 (Bit Score: 119; Significance: 5e-61; HSPs: 1)
Name: scaffold0369
Description:
Target: scaffold0369; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 11 - 149
Target Start/End: Complemental strand, 7026 - 6888
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
7026 |
atcatcagattagagtaaaggcggaagatatattcaaaacttcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa |
6927 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatt |
149 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |||||| |
|
|
| T |
6926 |
tgcaccaggtgtctttatggaatacatgaatagaatatt |
6888 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1488 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold1488
Description:
Target: scaffold1488; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 827 - 1008
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||| || |
|
|
| T |
827 |
atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatgaacactatgagtattctgtgatgccatttggagtatccaa |
926 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||| |||||| |||||||| ||||||| |||||||||||| ||| |||| | |||||| |||||||| || |||||| |
|
|
| T |
927 |
tgcgccagttgtcttcatggaatatatgaatagaatatttcatccttatttggaccattttgtggtggtgtttatagatgat |
1008 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008 (Bit Score: 118; Significance: 2e-60; HSPs: 2)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 132513 - 132694
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| |||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||| |
|
|
| T |
132513 |
atcatcagattagagtaaaggctgaagatatatcccaaaccgcgttccgaacgagatatggacactatgagtactctgtgatgccatttggagtatctaa |
132612 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| ||||||| |||| |||||||| ||||||| ||||| || || |||||| |
|
|
| T |
132613 |
tgcgcccggtgtctttatggaatacatgaatagaatattttatccttatctggactgttttgtggtggtctttatagatgat |
132694 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 26049 - 25938
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||| ||| ||||||| ||||| |||||||||||||||||||||||||||||||||| ||| || || |
|
|
| T |
26049 |
atcatccgattagagtgaaggcggaagatatatccataaccgcgttccaaacgaagtatggacactatgagtattctgtgatgccatttagagtatgcaa |
25950 |
T |
 |
| Q |
111 |
tgcgccaggtgt |
122 |
Q |
| |
|
|||||||||||| |
|
|
| T |
25949 |
tgcgccaggtgt |
25938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0561 (Bit Score: 114; Significance: 5e-58; HSPs: 1)
Name: scaffold0561
Description:
Target: scaffold0561; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 7029 - 7210
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||| || |
|
|
| T |
7029 |
atcatcatattagagtgaaggcggaagatatatccaaaacagcgttccaaacgaggtatggacactatgggtattctgtgatgccatttggagtatccaa |
7128 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||| |||| |||||||| ||||||| |||||||||||| ||| |||| |||||||| |||||||| || |||||| |
|
|
| T |
7129 |
tgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatatggaccgttttgtggtggtgtttatagatgat |
7210 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0467 (Bit Score: 114; Significance: 5e-58; HSPs: 1)
Name: scaffold0467
Description:
Target: scaffold0467; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 1645 - 1826
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||| ||||| |||||| |||||||||| ||||||||||| ||||||||| ||||||||||||| || ||||||||||||| || || |
|
|
| T |
1645 |
atcatcagattagagtgaaggcagaagatgtatccaaaaccgcgttccgaacaaggtatggaaactatgagtattccgtaatgccatttggagtttccaa |
1744 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| |||||||| || |||||| |
|
|
| T |
1745 |
tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgat |
1826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0876 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0876
Description:
Target: scaffold0876; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 970 - 1151
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||| || |
|
|
| T |
970 |
atcatcagattagagtgaaggcggaagatatacctaaaaccatgttccgaacgaggtatggacactatgagtattctgtgatgccatttgcagtatccaa |
1069 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||| |||| |||||||| ||||||| |||||||||||| |||||||| |||||| | |||||||| || |||||| |
|
|
| T |
1070 |
tgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatctggaccgttttatggtggtgtttatagatgat |
1151 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0387 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0387
Description:
Target: scaffold0387; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 16340 - 16159
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||| |||||| | || |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| || |
|
|
| T |
16340 |
atcatcaaattagaatgaatgcggaagatatatctaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccattttgagtatccaa |
16241 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||| |||||||||| |||||||||||||||| ||||||||| || |||||||| |||||||| ||| |||| || |||||| |
|
|
| T |
16240 |
tgcgtcaggtgtcttcatggaatacatgaatagaatatttcaaccttatctggaccgttttgtggtgatgtttatagatgat |
16159 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021 (Bit Score: 102; Significance: 7e-51; HSPs: 3)
Name: scaffold0021
Description:
Target: scaffold0021; HSP #1
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 21871 - 22052
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||| |||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||| || ||| || |
|
|
| T |
21871 |
atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaa |
21970 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||| ||||||||||| |||||||| ||||||| |||||||||||| |||||||| ||||||| ||||| || || |||||| |
|
|
| T |
21971 |
tgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtggtggtttttatagatgat |
22052 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021; HSP #2
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 11 - 192
Target Start/End: Original strand, 31447 - 31628
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
||||||| |||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||| || ||| || |
|
|
| T |
31447 |
atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaa |
31546 |
T |
 |
| Q |
111 |
tgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||| ||||||||||| |||||||| ||||||| |||||||||||| |||||||| ||||||| ||||| || || |||||| |
|
|
| T |
31547 |
tgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtggtggtttttatagatgat |
31628 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 7438 - 7315
Alignment:
| Q |
69 |
tggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgt |
168 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||| || ||||||| |||||||||||| |||||| | ||| |
|
|
| T |
7438 |
tggacactatgagtattatgtgatgccatttggagtatctaatgcgccaggtgtcttcatggagtatatgaatataatatttcatccttatctgaaccgt |
7339 |
T |
 |
| Q |
169 |
tttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||||| |||| |||||| |||||| |
|
|
| T |
7338 |
tttgtggtggagttcatagatgat |
7315 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0092 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0092
Description:
Target: scaffold0092; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 378 - 208
Alignment:
| Q |
22 |
agagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtg |
121 |
Q |
| |
|
||||| ||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
378 |
agagtgaaggcggaatatatatccaaaatcgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtg |
279 |
T |
 |
| Q |
122 |
tctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||| || || || ||||||| |||||||||||| |||||| | ||||||| |||||||| || |||||| |
|
|
| T |
278 |
tcttcatagagtatatgaatagaatatttcatccttatctgtactgttttgtggtggtgtttatagatgat |
208 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0462 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold0462
Description:
Target: scaffold0462; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 2221 - 2117
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaa |
110 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
2221 |
atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattatgtgatgccatttggagtatctaa |
2122 |
T |
 |
| Q |
111 |
tgcgc |
115 |
Q |
| |
|
||||| |
|
|
| T |
2121 |
tgcgc |
2117 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0719 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0719
Description:
Target: scaffold0719; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 4847 - 4785
Alignment:
| Q |
33 |
ggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgcc |
95 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4847 |
ggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgcc |
4785 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0635 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0635
Description:
Target: scaffold0635; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 166
Target Start/End: Complemental strand, 9143 - 9022
Alignment:
| Q |
45 |
caaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaatacatgaataaa |
144 |
Q |
| |
|
||||||||| || |||||||||||||| |||||||| || | ||||||| ||||||| | ||||||||| |||||||| |||||||||||||||| | |
|
|
| T |
9143 |
caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga |
9044 |
T |
 |
| Q |
145 |
atatttcatccctatctggatc |
166 |
Q |
| |
|
|| || ||||| ||| |||||| |
|
|
| T |
9043 |
atcttccatccttatttggatc |
9022 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0465 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0465
Description:
Target: scaffold0465; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 13649 - 13707
Alignment:
| Q |
11 |
atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtat |
69 |
Q |
| |
|
|||||||||||| ||| ||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
13649 |
atcatcagattacagtgaaggcaaaagatatatccaaaaccgcgttccgaacgaggtat |
13707 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0058 (Bit Score: 32; Significance: 0.000000004; HSPs: 2)
Name: scaffold0058
Description:
Target: scaffold0058; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 76693 - 76630
Alignment:
| Q |
23 |
gagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattc |
86 |
Q |
| |
|
||||||||||||| |||||||||||||||| ||||| || || |||||||||| ||| ||||| |
|
|
| T |
76693 |
gagtaaaggcggagtatatatccaaaactgcattccggactagatatggacactttgaatattc |
76630 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0058; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 192
Target Start/End: Original strand, 27337 - 27453
Alignment:
| Q |
76 |
tatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttg |
175 |
Q |
| |
|
||||| |||||||||||||| || || | |||||||||| || || ||| ||||||| |||||| || |||||| | ||||| ||||||||||||| |
|
|
| T |
27337 |
tatgaatattctgtgatgcctttcggtgttactaatgcgccgggagtatttgtggaatatatgaatcgtatttttcatacttatctagatcgttttgttg |
27436 |
T |
 |
| Q |
176 |
tggtgttcattgatgat |
192 |
Q |
| |
|
| ||||| || |||||| |
|
|
| T |
27437 |
ttgtgtttatagatgat |
27453 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 165
Target Start/End: Complemental strand, 50996 - 50938
Alignment:
| Q |
107 |
ctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggat |
165 |
Q |
| |
|
|||||||||| ||||| |||||||| || ||||||| ||| |||||| ||||||||||| |
|
|
| T |
50996 |
ctaatgcgcctggtgtgtttatggagtatatgaatagaatttttcatgcctatctggat |
50938 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0647 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0647
Description:
Target: scaffold0647; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 3085 - 3000
Alignment:
| Q |
107 |
ctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
||||||| || ||||| |||||||||||||||||| || |||||| | ||| |||||||||| || || |||||||| |||||| |
|
|
| T |
3085 |
ctaatgcaccgggtgtatttatggaatacatgaatcgtatttttcatgcttatttggatcgtttcgtggttgtgttcatcgatgat |
3000 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0309 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0309
Description:
Target: scaffold0309; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 11979 - 11894
Alignment:
| Q |
107 |
ctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatcgttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||||||||| ||||| |||||||| || ||||| | ||| |||||| ||||||||||| ||||| || ||||| ||||||||| |
|
|
| T |
11979 |
ctaatgcgcctggtgtgtttatggagtatatgaacagaatttttcatgcctatctggataaatttgtggttgtgtttattgatgat |
11894 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 192
Target Start/End: Original strand, 9114 - 9239
Alignment:
| Q |
67 |
tatggacactatgagtattctgtgatgccatttggagcatctaatgcgccaggtgtctttatggaatacatgaataaaatatttcatccctatctggatc |
166 |
Q |
| |
|
|||||||| ||||| ||||| |||||||| || || | | |||||||||||||| |||||||| ||||||||| || |||||| | ||| | |||| |
|
|
| T |
9114 |
tatggacattatgaatattcagtgatgcctttcggtgttacaaatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttagatc |
9213 |
T |
 |
| Q |
167 |
gttttgttgtggtgttcattgatgat |
192 |
Q |
| |
|
|||| || || |||||||| |||||| |
|
|
| T |
9214 |
gtttcgtggttgtgttcatggatgat |
9239 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0270 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0270
Description:
Target: scaffold0270; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 141
Target Start/End: Complemental strand, 6055 - 6023
Alignment:
| Q |
109 |
aatgcgccaggtgtctttatggaatacatgaat |
141 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |
|
|
| T |
6055 |
aatgcgccaggtgtgtttatggaatacatgaat |
6023 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0270; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 141
Target Start/End: Complemental strand, 13185 - 13153
Alignment:
| Q |
109 |
aatgcgccaggtgtctttatggaatacatgaat |
141 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |
|
|
| T |
13185 |
aatgcgccaggtgtgtttatggaatacatgaat |
13153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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