View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6197_high_24 (Length: 286)
Name: NF6197_high_24
Description: NF6197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6197_high_24 |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 12 - 271
Target Start/End: Original strand, 25241248 - 25241508
Alignment:
| Q |
12 |
atgaatggacagtgttaattggtattaagcagcttgatcataatgttatcgagtttggttatgttattatcttgttgttgttgaagagacaagtcaatat |
111 |
Q |
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| T |
25241248 |
atgaatggacagtgttaattggtattaagcagcttgatcataatgttatcgagtttggttatgttattatcttcttgttgttgaagagacaagtcaatat |
25241347 |
T |
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| Q |
112 |
gattgattatttcttaactgagatggttcatgcttattttct-nnnnnnnnntctgatattctaacaagtattcagtatttgaagatcaatgaaatgcat |
210 |
Q |
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| T |
25241348 |
gattgattatttcttaactgagatggttcatgcttattttctataaaaaaaaactgatattctaacaagtattcagtatttgaagatcaatgaaatgcat |
25241447 |
T |
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| Q |
211 |
tgatttttctttgtaaataaaaacaaaatacattaaccattcagattgacatcagaaggga |
271 |
Q |
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| T |
25241448 |
tgatttttctttgtaaataaaaacaaaatacattaaccattcacattgacatcaaaaggga |
25241508 |
T |
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