View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6197_high_36 (Length: 237)
Name: NF6197_high_36
Description: NF6197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6197_high_36 |
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Alignment Details
Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 12322842 - 12322622
Alignment:
| Q |
1 |
aatgaatccattaataattccattcgtccgtgacacacacaaaataaaaacacccatcccgtgaaatattctcatcaacacgtgtctcttcatctcctct |
100 |
Q |
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| T |
12322842 |
aatgaatccattaataattccattcgtccgtgacacacacaaaataaaaacacc-atcccgtgaaatattctcatcaacacgtgtctcttcatctcctct |
12322744 |
T |
|
| Q |
101 |
catgaaaaataaagtaatgtgaccacaaactgaaaatgaagactttctttcttagttcttgaaatttctgcagaatcttcttatagctgcatgtgaaaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12322743 |
catgaaaaataaagtaatgtgaccacaaactgaaaatgaagactttctttcttagttcttgaaatttctgcagaatcttcttatagctgcatgtgaaaat |
12322644 |
T |
|
| Q |
201 |
attgcctaagaattgaaactat |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
12322643 |
attgcctaagaattgaaactat |
12322622 |
T |
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