View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6199_low_13 (Length: 299)
Name: NF6199_low_13
Description: NF6199
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6199_low_13 |
 |  |
|
| [»] scaffold0372 (1 HSPs) |
 |  |  |
|
| [»] scaffold0250 (1 HSPs) |
 |  |  |
|
| [»] scaffold1458 (1 HSPs) |
 |  |  |
|
| [»] scaffold0194 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr3 (Bit Score: 170; Significance: 3e-91; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 38 - 283
Target Start/End: Original strand, 28204741 - 28204990
Alignment:
| Q |
38 |
ttaagggatcaaagttgcaactttgtaaaagttagaaggctaaaactgctattaagcctgatttatacttcatnnnnnnnnnnnnngttgt----tggtt |
133 |
Q |
| |
|
||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |
|
|
| T |
28204741 |
ttaagagatcaaagttacaactttgtaaaagttagaaggctaaaactgctattaaacctgatttatacttcataaaaagaaaaaaagttgtcgcgtggtt |
28204840 |
T |
 |
| Q |
134 |
tgatgatgcaaaaatttatgtttttgtacggtaccttgctacatgcgttatctagtcccgtattcaatttctaaatcaaacagggtataaaaaatttgtt |
233 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
28204841 |
tgatgatgcaaaaatttatgtttttgtacggtaccttgctacatgtgttatctagtcccgtattcaatttctaaatcaaatatggtataaaaaatttgtt |
28204940 |
T |
 |
| Q |
234 |
cagtcttaccatatgtttgacaaactccatttttagtatattgtgttttt |
283 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28204941 |
cagtcttaccatatgtttgacaaactccatttttagtatattgtgttttt |
28204990 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 49787293 - 49787249
Alignment:
| Q |
52 |
ttgcaactttgtaaaagttagaaggctaaaactgctattaagcct |
96 |
Q |
| |
|
||||||||||| |||||||||| |||||||| ||||||||||||| |
|
|
| T |
49787293 |
ttgcaactttggaaaagttagagggctaaaattgctattaagcct |
49787249 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 20432248 - 20432189
Alignment:
| Q |
37 |
cttaagggatcaaagttgcaactttgtaaaagttagaaggctaaaactgctattaagcct |
96 |
Q |
| |
|
|||| |||| |||||| ||||||| ||||||||||| ||| |||||||||||||||||| |
|
|
| T |
20432248 |
cttaggggaccaaagtcgcaacttcgtaaaagttagggggcaaaaactgctattaagcct |
20432189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 1814828 - 1814866
Alignment:
| Q |
56 |
aactttgtaaaagttagaaggctaaaactgctattaagc |
94 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
1814828 |
aactttggaaaagttaggaggctaaaactgctattaagc |
1814866 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 33329669 - 33329611
Alignment:
| Q |
37 |
cttaagggatcaaagttgcaactttgtaaaagttagaaggctaaaactgctattaagcc |
95 |
Q |
| |
|
|||| ||| ||||| | ||||||| |||||||||||| ||| ||||||||||||||||| |
|
|
| T |
33329669 |
cttagggggtcaaaatcgcaacttcgtaaaagttagagggcgaaaactgctattaagcc |
33329611 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 37; Significance: 0.000000000007; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 26311439 - 26311395
Alignment:
| Q |
52 |
ttgcaactttgtaaaagttagaaggctaaaactgctattaagcct |
96 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
26311439 |
ttgcaactttgtaaaagttaggaggctaaaactgttattaagcct |
26311395 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 30349430 - 30349348
Alignment:
| Q |
14 |
aggggcggttttgtagnnnnnnncttaagggatcaaagttgcaactttgtaaaagttagaaggctaaaactgctattaagcct |
96 |
Q |
| |
|
|||||||||||||||| |||| ||| ||||| | ||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
30349430 |
aggggcggttttgtagtttttttcttaggggctcaaaatcgcaactttgggaaagttagagggctaaaactgctattaagcct |
30349348 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 17248688 - 17248636
Alignment:
| Q |
43 |
ggatcaaagttgcaactttgtaaaagttagaaggctaaaactgctattaagcc |
95 |
Q |
| |
|
|||||||| | |||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
17248688 |
ggatcaaaatcgcaactttaaaaaagttaggaggctaaaactgctattaagcc |
17248636 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 2853682 - 2853736
Alignment:
| Q |
47 |
caaagttgcaactttgtaaaagttagaaggctaaaactgctattaagcctgattt |
101 |
Q |
| |
|
|||| ||||||||||| |||||||| ||| ||||||||||||||||||| |||| |
|
|
| T |
2853682 |
caaaattgcaactttgagaaagttaggaggttaaaactgctattaagcctaattt |
2853736 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 20474960 - 20475014
Alignment:
| Q |
37 |
cttaagggatcaaagttgcaactttgtaaaagttagaaggctaaaactgctatta |
91 |
Q |
| |
|
|||||||||||||| | ||||||||| ||||||||| |||||||| |||||||| |
|
|
| T |
20474960 |
cttaagggatcaaaatcgcaactttgaaaaagttagggggctaaaattgctatta |
20475014 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 35250177 - 35250118
Alignment:
| Q |
37 |
cttaagggatcaaagttgcaactttgtaaaagttagaaggctaaaactgctattaagcct |
96 |
Q |
| |
|
||||||||| |||| | ||||||||| |||||||||| |||||||||| ||||||||||| |
|
|
| T |
35250177 |
cttaagggaccaaaatcgcaactttggaaaagttagagggctaaaactactattaagcct |
35250118 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 17876226 - 17876174
Alignment:
| Q |
42 |
gggatcaaagttgcaactttgtaaaagttagaaggctaaaactgctattaagc |
94 |
Q |
| |
|
||||||||| | ||||||||| ||||||||||| ||||||| ||||||||||| |
|
|
| T |
17876226 |
gggatcaaaatcgcaactttggaaaagttagaaagctaaaattgctattaagc |
17876174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 41243687 - 41243643
Alignment:
| Q |
52 |
ttgcaactttgtaaaagttagaaggctaaaactgctattaagcct |
96 |
Q |
| |
|
||||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
41243687 |
ttgcaactttggaaaagttagggggctaaaactgctattaagcct |
41243643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 17931999 - 17932041
Alignment:
| Q |
54 |
gcaactttgtaaaagttagaaggctaaaactgctattaagcct |
96 |
Q |
| |
|
||||||||| |||||| || ||||||||||||||||||||||| |
|
|
| T |
17931999 |
gcaactttggaaaagtgaggaggctaaaactgctattaagcct |
17932041 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 27545385 - 27545343
Alignment:
| Q |
54 |
gcaactttgtaaaagttagaaggctaaaactgctattaagcct |
96 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
27545385 |
gcaactttggaaaagttagacggctaaaactgctattaagcct |
27545343 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 92
Target Start/End: Original strand, 41487482 - 41487520
Alignment:
| Q |
54 |
gcaactttgtaaaagttagaaggctaaaactgctattaa |
92 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||||| |
|
|
| T |
41487482 |
gcaactttggaaaagttagagggctaaaactgctattaa |
41487520 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 45177259 - 45177201
Alignment:
| Q |
37 |
cttaagggatcaaagttgcaactttgtaaaagttagaaggctaaaactgctattaagcc |
95 |
Q |
| |
|
|||| ||||||||| | ||||||||| |||||||| |||||||| ||||||||||||| |
|
|
| T |
45177259 |
cttaggggatcaaaatcgcaactttgagaaagttaggaggctaaatctgctattaagcc |
45177201 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 27904756 - 27904798
Alignment:
| Q |
54 |
gcaactttgtaaaagttagaaggctaaaactgctattaagcct |
96 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
27904756 |
gcaactttgaaaaagttagagggctaaaactgctattaagcct |
27904798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 40132945 - 40132904
Alignment:
| Q |
54 |
gcaactttgtaaaagttagaaggctaaaactgctattaagcc |
95 |
Q |
| |
|
||||||||| |||||||||| | ||||||||||||||||||| |
|
|
| T |
40132945 |
gcaactttgaaaaagttagaggactaaaactgctattaagcc |
40132904 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 34; Significance: 0.0000000004; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 20112422 - 20112463
Alignment:
| Q |
54 |
gcaactttgtaaaagttagaaggctaaaactgctattaagcc |
95 |
Q |
| |
|
||||||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
20112422 |
gcaactttggaaaagttagaaggctaaaactgttattaagcc |
20112463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 8070676 - 8070630
Alignment:
| Q |
47 |
caaagttgcaactttgtaaaagttagaaggctaaaactgctattaag |
93 |
Q |
| |
|
|||||||||||||||| ||||||||| || |||||||||||||||| |
|
|
| T |
8070676 |
caaagttgcaactttggaaaagttagggggttaaaactgctattaag |
8070630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 21451500 - 21451458
Alignment:
| Q |
54 |
gcaactttgtaaaagttagaaggctaaaactgctattaagcct |
96 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
21451500 |
gcaactttgagaaagttaggaggctaaaactgctattaagcct |
21451458 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 2653994 - 2653953
Alignment:
| Q |
54 |
gcaactttgtaaaagttagaaggctaaaactgctattaagcc |
95 |
Q |
| |
|
||||||| ||||||||||| |||| ||||||||||||||||| |
|
|
| T |
2653994 |
gcaacttcgtaaaagttaggaggcaaaaactgctattaagcc |
2653953 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 21957740 - 21957780
Alignment:
| Q |
54 |
gcaactttgtaaaagttagaaggctaaaactgctattaagc |
94 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
21957740 |
gcaactttggaaaagttagggggctaaaactgctattaagc |
21957780 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 19399431 - 19399491
Alignment:
| Q |
37 |
cttaagggatcaaagttgcaactttgtaaaagttagaaggctaaaactgctattaagcctg |
97 |
Q |
| |
|
||||||||| |||| | |||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
19399431 |
cttaagggaccaaaatcacaactttgaaaaagttagggggctaaaactgctattaagcctg |
19399491 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 6592782 - 6592723
Alignment:
| Q |
37 |
cttaagggatcaaagttgcaactttgtaaaagttagaaggctaaaactgctattaagcct |
96 |
Q |
| |
|
|||| ||| ||||| | ||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
6592782 |
cttagggggtcaaaatcgcaactttggaaaagttagggggctaaaactgctattaagcct |
6592723 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 34679138 - 34679096
Alignment:
| Q |
54 |
gcaactttgtaaaagttagaaggctaaaactgctattaagcct |
96 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
34679138 |
gcaactttggaaaagttagggggctaaaactgctattaagcct |
34679096 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 4576583 - 4576546
Alignment:
| Q |
55 |
caactttgtaaaagttagaaggctaaaactgctattaa |
92 |
Q |
| |
|
|||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
4576583 |
caactttgaaaaagttaggaggctaaaactgctattaa |
4576546 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 8553803 - 8553843
Alignment:
| Q |
46 |
tcaaagttgcaactttgtaaaagttagaaggctaaaactgc |
86 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||| |||| |
|
|
| T |
8553803 |
tcaaaattgcaactttgaaaaagttagaaggctaaacctgc |
8553843 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 32; Significance: 0.000000007; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 17760947 - 17761006
Alignment:
| Q |
37 |
cttaagggatcaaagttgcaactttgtaaaagttagaaggctaaaactgctattaagcct |
96 |
Q |
| |
|
|||| ||||||||| ||||||||| |||||||||| || | |||||||||||||||||| |
|
|
| T |
17760947 |
cttaggggatcaaaattgcaacttcgtaaaagttaagagacgaaaactgctattaagcct |
17761006 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 3377542 - 3377500
Alignment:
| Q |
54 |
gcaactttgtaaaagttagaaggctaaaactgctattaagcct |
96 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
3377542 |
gcaactttggaaaagttagggggctaaaactgctattaagcct |
3377500 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 8009989 - 8010030
Alignment:
| Q |
55 |
caactttgtaaaagttagaaggctaaaactgctattaagcct |
96 |
Q |
| |
|
|||||| ||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
8009989 |
caacttcgtaaaagttaggaggctaaaactactattaagcct |
8010030 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 14978838 - 14978797
Alignment:
| Q |
54 |
gcaactttgtaaaagttagaaggctaaaactgctattaagcc |
95 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
14978838 |
gcaactttggaaaagttagggggctaaaactgctattaagcc |
14978797 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0372 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0372
Description:
Target: scaffold0372; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 165 - 123
Alignment:
| Q |
54 |
gcaactttgtaaaagttagaaggctaaaactgctattaagcct |
96 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
165 |
gcaactttgagaaagttaggaggctaaaactgctattaagcct |
123 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0250 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0250
Description:
Target: scaffold0250; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 3611 - 3573
Alignment:
| Q |
56 |
aactttgtaaaagttagaaggctaaaactgctattaagc |
94 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
3611 |
aactttgtgaaagttagaaggcgaaaactgctattaagc |
3573 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1458 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1458
Description:
Target: scaffold1458; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 1511 - 1470
Alignment:
| Q |
55 |
caactttgtaaaagttagaaggctaaaactgctattaagcct |
96 |
Q |
| |
|
||||||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
1511 |
caactttgtgaaagttagggggctaaaactgctattaagcct |
1470 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0194 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0194
Description:
Target: scaffold0194; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 25168 - 25209
Alignment:
| Q |
55 |
caactttgtaaaagttagaaggctaaaactgctattaagcct |
96 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| |||| |
|
|
| T |
25168 |
caactttagaaaagttagaaggctaaaactgctattatgcct |
25209 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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