View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6199_low_19 (Length: 255)

Name: NF6199_low_19
Description: NF6199
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6199_low_19
NF6199_low_19
[»] chr3 (68 HSPs)
chr3 (17-144)||(2215044-2215171)
chr3 (17-144)||(18351334-18351461)
chr3 (17-137)||(27978895-27979015)
chr3 (17-144)||(14425934-14426061)
chr3 (17-144)||(2256730-2256855)
chr3 (17-144)||(18041208-18041334)
chr3 (17-144)||(43468197-43468323)
chr3 (16-136)||(18949567-18949685)
chr3 (17-135)||(5144391-5144509)
chr3 (17-144)||(17935378-17935504)
chr3 (21-144)||(18900462-18900583)
chr3 (17-144)||(27338986-27339111)
chr3 (17-136)||(30062755-30062872)
chr3 (17-144)||(51922187-51922313)
chr3 (17-133)||(6563917-6564032)
chr3 (17-133)||(6577586-6577701)
chr3 (17-133)||(29730540-29730655)
chr3 (17-144)||(4435731-4435856)
chr3 (17-144)||(8204155-8204281)
chr3 (17-144)||(13507367-13507492)
chr3 (21-144)||(15697035-15697157)
chr3 (17-144)||(17360380-17360506)
chr3 (17-144)||(17365022-17365148)
chr3 (17-144)||(39707149-39707275)
chr3 (17-144)||(50826661-50826786)
chr3 (17-144)||(50849067-50849192)
chr3 (17-122)||(22952021-22952125)
chr3 (17-122)||(22965995-22966099)
chr3 (17-144)||(3711899-3712025)
chr3 (21-144)||(15711325-15711447)
chr3 (17-144)||(17630411-17630537)
chr3 (17-144)||(41016697-41016823)
chr3 (17-133)||(6293642-6293757)
chr3 (17-121)||(13847794-13847898)
chr3 (17-101)||(25264944-25265028)
chr3 (17-101)||(25274438-25274522)
chr3 (17-144)||(4456522-4456647)
chr3 (17-144)||(8196344-8196470)
chr3 (21-144)||(15694722-15694844)
chr3 (17-144)||(27550771-27550897)
chr3 (17-136)||(27957299-27957417)
chr3 (17-135)||(10713553-10713670)
chr3 (17-101)||(10720827-10720911)
chr3 (17-144)||(8153255-8153381)
chr3 (29-144)||(11918336-11918452)
chr3 (29-144)||(11932906-11933022)
chr3 (17-101)||(15675197-15675281)
chr3 (29-137)||(7096606-7096715)
chr3 (29-137)||(17616612-17616721)
chr3 (69-137)||(7063800-7063868)
chr3 (17-101)||(15683739-15683823)
chr3 (29-144)||(31278781-31278897)
chr3 (29-144)||(13275003-13275120)
chr3 (29-133)||(24216123-24216227)
chr3 (29-136)||(12468968-12469077)
chr3 (29-144)||(16290995-16291111)
chr3 (29-135)||(17562826-17562934)
chr3 (17-103)||(13555541-13555627)
chr3 (21-134)||(21185545-21185657)
chr3 (29-135)||(1480191-1480299)
chr3 (29-135)||(4503494-4503602)
chr3 (68-144)||(16814560-16814635)
chr3 (17-57)||(18882055-18882095)
chr3 (77-136)||(30102225-30102286)
chr3 (69-133)||(1004289-1004352)
chr3 (59-121)||(9567441-9567503)
chr3 (86-144)||(18890344-18890400)
chr3 (29-100)||(27880524-27880596)
[»] chr7 (46 HSPs)
chr7 (17-144)||(16545562-16545689)
chr7 (17-144)||(16619973-16620100)
chr7 (17-144)||(10449442-10449569)
chr7 (17-143)||(17211397-17211523)
chr7 (17-144)||(4661811-4661936)
chr7 (17-135)||(29082088-29082206)
chr7 (17-135)||(29096847-29096965)
chr7 (17-133)||(5199106-5199221)
chr7 (17-133)||(19384037-19384152)
chr7 (17-133)||(5208223-5208338)
chr7 (17-133)||(16889677-16889792)
chr7 (17-133)||(27965884-27965999)
chr7 (17-133)||(27975337-27975452)
chr7 (17-144)||(13832861-13832986)
chr7 (17-144)||(13840891-13841016)
chr7 (17-144)||(16909761-16909887)
chr7 (17-144)||(18302988-18303114)
chr7 (17-133)||(17514275-17514390)
chr7 (17-133)||(17538824-17538939)
chr7 (17-144)||(4940219-4940344)
chr7 (17-136)||(17739308-17739426)
chr7 (17-136)||(1886859-1886977)
chr7 (17-136)||(1900960-1901078)
chr7 (17-101)||(15185691-15185775)
chr7 (17-101)||(15200311-15200395)
chr7 (17-136)||(24186054-24186172)
chr7 (29-144)||(40680071-40680187)
chr7 (29-144)||(16227860-16227977)
chr7 (29-144)||(16244738-16244855)
chr7 (140-244)||(1956945-1957049)
chr7 (17-103)||(13492004-13492090)
chr7 (29-135)||(29023532-29023640)
chr7 (17-133)||(44075141-44075256)
chr7 (140-206)||(4945726-4945792)
chr7 (29-136)||(27435365-27435474)
chr7 (29-136)||(27444395-27444504)
chr7 (71-135)||(29031970-29032035)
chr7 (29-135)||(16120633-16120741)
chr7 (29-135)||(16147373-16147481)
chr7 (17-93)||(43139053-43139129)
chr7 (17-81)||(13478191-13478255)
chr7 (202-244)||(4949090-4949132)
chr7 (29-133)||(558393-558497)
chr7 (29-133)||(568303-568407)
chr7 (29-133)||(2549066-2549170)
chr7 (29-133)||(2562952-2563056)
[»] chr4 (30 HSPs)
chr4 (17-144)||(55584284-55584411)
chr4 (17-137)||(18010198-18010318)
chr4 (17-144)||(27341639-27341764)
chr4 (17-144)||(26034088-26034214)
chr4 (17-144)||(26210507-26210632)
chr4 (17-144)||(26219267-26219392)
chr4 (18-144)||(25652574-25652700)
chr4 (17-144)||(52297841-52297967)
chr4 (17-144)||(773301-773426)
chr4 (17-144)||(8092863-8092988)
chr4 (17-144)||(8101668-8101793)
chr4 (17-136)||(12425343-12425460)
chr4 (17-144)||(1875471-1875597)
chr4 (17-144)||(1889586-1889712)
chr4 (17-144)||(4522341-4522466)
chr4 (17-144)||(12998683-12998808)
chr4 (17-144)||(20865786-20865911)
chr4 (17-144)||(10640498-10640623)
chr4 (17-144)||(21530232-21530359)
chr4 (17-100)||(4747528-4747611)
chr4 (29-144)||(21398958-21399074)
chr4 (29-137)||(14718635-14718744)
chr4 (29-137)||(14736920-14737029)
chr4 (29-144)||(25247293-25247410)
chr4 (29-144)||(34842807-34842924)
chr4 (29-135)||(19645001-19645109)
chr4 (29-135)||(19759944-19760052)
chr4 (29-135)||(19774700-19774808)
chr4 (29-135)||(10786777-10786885)
chr4 (29-135)||(21811004-21811112)
[»] scaffold0031 (1 HSPs)
scaffold0031 (18-144)||(421-547)
[»] scaffold0043 (1 HSPs)
scaffold0043 (17-144)||(63337-63464)
[»] scaffold0015 (3 HSPs)
scaffold0015 (17-144)||(194867-194994)
scaffold0015 (17-136)||(188686-188804)
scaffold0015 (17-133)||(159220-159335)
[»] chr8 (38 HSPs)
chr8 (17-144)||(22103551-22103678)
chr8 (17-144)||(36252420-36252548)
chr8 (17-135)||(25719176-25719294)
chr8 (17-144)||(17529183-17529308)
chr8 (17-144)||(26871339-26871464)
chr8 (17-144)||(36248860-36248985)
chr8 (17-136)||(4837489-4837606)
chr8 (17-144)||(15832063-15832188)
chr8 (21-133)||(36576674-36576785)
chr8 (17-136)||(4842934-4843051)
chr8 (17-144)||(16760951-16761077)
chr8 (17-144)||(16775388-16775514)
chr8 (17-144)||(17662395-17662520)
chr8 (17-144)||(17681524-17681649)
chr8 (17-135)||(25796693-25796809)
chr8 (17-144)||(4583717-4583843)
chr8 (17-144)||(30939639-30939765)
chr8 (17-144)||(39836137-39836263)
chr8 (17-144)||(39844179-39844305)
chr8 (17-137)||(25584978-25585096)
chr8 (17-144)||(17975790-17975915)
chr8 (17-135)||(23922979-23923096)
chr8 (59-144)||(19850930-19851015)
chr8 (59-144)||(19856966-19857051)
chr8 (17-121)||(1388219-1388323)
chr8 (29-144)||(23092857-23092973)
chr8 (29-137)||(31207635-31207744)
chr8 (29-144)||(14204646-14204762)
chr8 (29-144)||(14219287-14219403)
chr8 (17-121)||(26912652-26912755)
chr8 (29-144)||(6582813-6582930)
chr8 (29-144)||(22418262-22418379)
chr8 (69-144)||(17129429-17129505)
chr8 (17-103)||(14335866-14335952)
chr8 (17-103)||(23600983-23601069)
chr8 (29-136)||(22366864-22366973)
chr8 (29-135)||(16190528-16190636)
chr8 (29-135)||(31000744-31000852)
[»] chr5 (53 HSPs)
chr5 (17-144)||(43596633-43596760)
chr5 (17-144)||(43629427-43629554)
chr5 (17-144)||(23348669-23348795)
chr5 (140-244)||(20379647-20379751)
chr5 (17-136)||(1726746-1726863)
chr5 (17-135)||(41093677-41093795)
chr5 (17-136)||(19225986-19226103)
chr5 (17-101)||(11802474-11802558)
chr5 (17-101)||(11812550-11812634)
chr5 (17-135)||(26078484-26078603)
chr5 (17-135)||(26088463-26088582)
chr5 (17-144)||(28845299-28845425)
chr5 (17-144)||(28853909-28854035)
chr5 (17-101)||(12170256-12170340)
chr5 (17-101)||(12179685-12179769)
chr5 (17-105)||(21931551-21931639)
chr5 (19-144)||(31412966-31413090)
chr5 (17-133)||(20377870-20377985)
chr5 (17-133)||(20386659-20386774)
chr5 (29-144)||(21858689-21858805)
chr5 (17-100)||(3476892-3476975)
chr5 (17-100)||(3491662-3491745)
chr5 (17-135)||(31423882-31423998)
chr5 (29-144)||(21850775-21850891)
chr5 (29-144)||(21856936-21857052)
chr5 (140-244)||(21865269-21865373)
chr5 (29-144)||(23039198-23039314)
chr5 (17-133)||(33843956-33844071)
chr5 (17-101)||(36458770-36458854)
chr5 (17-144)||(24955421-24955546)
chr5 (17-144)||(24963881-24964006)
chr5 (29-143)||(31548183-31548298)
chr5 (17-103)||(29190269-29190355)
chr5 (17-98)||(20396394-20396475)
chr5 (29-137)||(26177180-26177289)
chr5 (17-133)||(33835257-33835372)
chr5 (29-144)||(23984844-23984961)
chr5 (69-144)||(17642568-17642643)
chr5 (17-103)||(345003-345089)
chr5 (29-100)||(27220280-27220352)
chr5 (29-100)||(27223287-27223359)
chr5 (29-100)||(27232758-27232830)
chr5 (17-103)||(359642-359728)
chr5 (29-135)||(27064181-27064289)
chr5 (29-135)||(21986305-21986413)
chr5 (29-135)||(21994953-21995061)
chr5 (29-135)||(23637439-23637547)
chr5 (29-135)||(23827885-23827993)
chr5 (29-135)||(23835343-23835451)
chr5 (71-135)||(23762462-23762527)
chr5 (17-79)||(27586827-27586889)
chr5 (203-244)||(20666637-20666678)
chr5 (47-98)||(20370721-20370772)
[»] chr2 (60 HSPs)
chr2 (17-144)||(28481349-28481476)
chr2 (17-144)||(35304704-35304831)
chr2 (17-135)||(21151447-21151565)
chr2 (21-144)||(26896659-26896782)
chr2 (17-144)||(25495955-25496080)
chr2 (17-144)||(6856084-6856210)
chr2 (17-144)||(15600737-15600864)
chr2 (17-144)||(15943115-15943241)
chr2 (17-144)||(15951625-15951751)
chr2 (17-144)||(35040060-35040185)
chr2 (17-144)||(42247602-42247728)
chr2 (17-143)||(30524645-30524769)
chr2 (17-131)||(33306682-33306796)
chr2 (17-144)||(24286981-24287107)
chr2 (17-144)||(24293549-24293675)
chr2 (157-244)||(30690744-30690831)
chr2 (17-110)||(34068798-34068891)
chr2 (17-136)||(20364656-20364773)
chr2 (17-144)||(34527973-34528099)
chr2 (17-144)||(34541947-34542073)
chr2 (17-144)||(35139978-35140104)
chr2 (17-144)||(35148319-35148445)
chr2 (17-144)||(41232442-41232568)
chr2 (17-144)||(42564503-42564629)
chr2 (17-144)||(42573127-42573253)
chr2 (17-121)||(21111387-21111491)
chr2 (140-244)||(21114403-21114507)
chr2 (17-121)||(44375182-44375285)
chr2 (17-121)||(44390763-44390866)
chr2 (17-144)||(17685062-17685188)
chr2 (17-100)||(30683231-30683314)
chr2 (17-126)||(2653054-2653162)
chr2 (17-126)||(3755012-3755120)
chr2 (17-126)||(3765063-3765171)
chr2 (17-136)||(26717627-26717745)
chr2 (17-136)||(26731760-26731878)
chr2 (17-101)||(29855389-29855473)
chr2 (17-144)||(20920839-20920965)
chr2 (29-144)||(16274777-16274893)
chr2 (25-133)||(34437105-34437212)
chr2 (29-135)||(42245561-42245668)
chr2 (29-137)||(31354851-31354960)
chr2 (29-144)||(10681463-10681579)
chr2 (29-144)||(16283953-16284069)
chr2 (69-143)||(11622221-11622295)
chr2 (17-103)||(21320743-21320829)
chr2 (29-133)||(42386134-42386238)
chr2 (29-133)||(42401018-42401122)
chr2 (17-103)||(14630453-14630539)
chr2 (17-103)||(19655687-19655773)
chr2 (29-144)||(22187337-22187454)
chr2 (29-144)||(21850261-21850378)
chr2 (29-144)||(21858696-21858813)
chr2 (29-135)||(34685711-34685819)
chr2 (29-135)||(34708133-34708241)
chr2 (17-80)||(38154126-38154189)
chr2 (17-56)||(39842135-39842174)
chr2 (29-136)||(27681062-27681172)
chr2 (17-57)||(25493307-25493347)
chr2 (30-79)||(17881341-17881390)
[»] scaffold0278 (1 HSPs)
scaffold0278 (20-144)||(10531-10655)
[»] scaffold0222 (1 HSPs)
scaffold0222 (17-144)||(9926-10053)
[»] scaffold0044 (2 HSPs)
scaffold0044 (17-144)||(80465-80592)
scaffold0044 (17-137)||(64063-64183)
[»] scaffold0023 (3 HSPs)
scaffold0023 (17-136)||(136445-136564)
scaffold0023 (17-136)||(145407-145526)
scaffold0023 (140-244)||(143648-143752)
[»] chr6 (53 HSPs)
chr6 (17-144)||(16302894-16303021)
chr6 (17-136)||(18205065-18205184)
chr6 (17-136)||(18220064-18220183)
chr6 (17-144)||(21708494-21708621)
chr6 (17-144)||(24920584-24920711)
chr6 (17-144)||(24485370-24485498)
chr6 (17-144)||(15389342-15389468)
chr6 (17-144)||(23927698-23927824)
chr6 (17-144)||(5996767-5996892)
chr6 (17-144)||(19826508-19826633)
chr6 (17-144)||(30823108-30823233)
chr6 (17-121)||(13827925-13828028)
chr6 (17-133)||(27047176-27047291)
chr6 (17-133)||(27057420-27057535)
chr6 (17-135)||(27960391-27960511)
chr6 (20-144)||(33300232-33300355)
chr6 (17-144)||(16589125-16589250)
chr6 (17-144)||(16606130-16606255)
chr6 (21-144)||(25993692-25993813)
chr6 (17-100)||(30995454-30995537)
chr6 (143-244)||(28305978-28306079)
chr6 (144-244)||(28271009-28271109)
chr6 (144-244)||(28349759-28349859)
chr6 (17-144)||(13492141-13492267)
chr6 (17-136)||(14475705-14475823)
chr6 (17-144)||(16635523-16635648)
chr6 (17-144)||(16645480-16645605)
chr6 (21-144)||(25552525-25552646)
chr6 (17-144)||(25713860-25713985)
chr6 (17-144)||(35090265-35090391)
chr6 (17-135)||(20530626-20530742)
chr6 (17-137)||(12451445-12451564)
chr6 (17-101)||(18112079-18112163)
chr6 (17-101)||(18126624-18126708)
chr6 (17-144)||(27537523-27537649)
chr6 (17-144)||(27551732-27551858)
chr6 (17-135)||(5487050-5487166)
chr6 (69-144)||(25654093-25654168)
chr6 (17-101)||(28266666-28266750)
chr6 (17-101)||(28345415-28345499)
chr6 (17-101)||(28304380-28304464)
chr6 (17-103)||(28267720-28267806)
chr6 (17-103)||(28346469-28346555)
chr6 (17-103)||(11063825-11063911)
chr6 (29-135)||(21358553-21358661)
chr6 (29-135)||(23962535-23962643)
chr6 (29-135)||(23982645-23982753)
chr6 (17-84)||(8719781-8719848)
chr6 (17-78)||(25693129-25693190)
chr6 (17-78)||(25699770-25699831)
chr6 (17-66)||(5008128-5008177)
chr6 (29-105)||(16097691-16097768)
chr6 (86-144)||(13827868-13827925)
[»] chr1 (35 HSPs)
chr1 (17-144)||(52101292-52101419)
chr1 (17-144)||(13452183-13452310)
chr1 (17-144)||(20502265-20502392)
chr1 (17-144)||(28459929-28460056)
chr1 (17-144)||(22479780-22479906)
chr1 (17-144)||(23952270-23952395)
chr1 (17-144)||(28991233-28991358)
chr1 (17-136)||(43456204-43456322)
chr1 (17-133)||(38123553-38123668)
chr1 (17-144)||(2385321-2385447)
chr1 (17-144)||(3431528-3431653)
chr1 (17-144)||(32135236-32135361)
chr1 (17-144)||(13803982-13804108)
chr1 (17-144)||(21497008-21497134)
chr1 (17-143)||(32608743-32608867)
chr1 (21-136)||(23355541-23355655)
chr1 (17-144)||(31541310-31541436)
chr1 (17-144)||(31549879-31550005)
chr1 (17-136)||(41744629-41744746)
chr1 (17-144)||(13477190-13477315)
chr1 (17-121)||(35097505-35097609)
chr1 (17-100)||(21244998-21245081)
chr1 (21-144)||(51055243-51055365)
chr1 (29-137)||(12464183-12464292)
chr1 (29-135)||(16135277-16135384)
chr1 (29-144)||(22472705-22472822)
chr1 (29-133)||(31553519-31553623)
chr1 (29-133)||(31562653-31562757)
chr1 (71-143)||(3350707-3350779)
chr1 (21-144)||(8240994-8241116)
chr1 (17-84)||(13461138-13461205)
chr1 (21-143)||(21055031-21055152)
chr1 (17-83)||(46776928-46776994)
chr1 (29-144)||(34336750-34336868)
chr1 (17-57)||(25337131-25337171)
[»] scaffold0091 (1 HSPs)
scaffold0091 (32-144)||(19916-20028)
[»] scaffold0451 (1 HSPs)
scaffold0451 (17-144)||(4645-4772)
[»] scaffold0001 (1 HSPs)
scaffold0001 (17-144)||(46576-46703)
[»] scaffold0357 (1 HSPs)
scaffold0357 (17-144)||(4377-4503)
[»] scaffold0429 (1 HSPs)
scaffold0429 (17-143)||(14983-15109)
[»] scaffold0431 (1 HSPs)
scaffold0431 (17-136)||(4515-4632)
[»] scaffold0155 (1 HSPs)
scaffold0155 (17-137)||(21578-21697)
[»] scaffold0002 (1 HSPs)
scaffold0002 (17-137)||(109511-109629)
[»] scaffold1804 (1 HSPs)
scaffold1804 (17-144)||(106-231)
[»] scaffold0056 (1 HSPs)
scaffold0056 (17-136)||(30044-30161)
[»] scaffold0192 (1 HSPs)
scaffold0192 (17-133)||(22057-22172)
[»] scaffold1199 (1 HSPs)
scaffold1199 (17-100)||(2336-2419)
[»] scaffold0144 (1 HSPs)
scaffold0144 (17-144)||(67-192)
[»] scaffold0257 (1 HSPs)
scaffold0257 (17-144)||(10291-10418)
[»] scaffold0156 (1 HSPs)
scaffold0156 (17-121)||(29696-29799)
[»] scaffold0605 (2 HSPs)
scaffold0605 (139-244)||(6088-6193)
scaffold0605 (29-110)||(7875-7957)
[»] scaffold0047 (1 HSPs)
scaffold0047 (29-143)||(83538-83653)
[»] scaffold0273 (1 HSPs)
scaffold0273 (29-135)||(22847-22954)
[»] scaffold0007 (1 HSPs)
scaffold0007 (17-103)||(63303-63389)
[»] scaffold0077 (2 HSPs)
scaffold0077 (70-144)||(32548-32622)
scaffold0077 (17-63)||(29899-29945)
[»] scaffold0455 (1 HSPs)
scaffold0455 (29-137)||(3709-3819)
[»] scaffold1481 (1 HSPs)
scaffold1481 (29-144)||(1606-1722)
[»] scaffold0389 (1 HSPs)
scaffold0389 (17-63)||(9796-9842)
[»] scaffold0233 (1 HSPs)
scaffold0233 (17-73)||(15501-15557)
[»] scaffold2020 (1 HSPs)
scaffold2020 (17-79)||(709-771)
[»] scaffold0009 (2 HSPs)
scaffold0009 (17-79)||(164724-164786)
scaffold0009 (27-79)||(149519-149571)
[»] scaffold0019 (1 HSPs)
scaffold0019 (17-54)||(172567-172604)
[»] scaffold0392 (1 HSPs)
scaffold0392 (17-50)||(16522-16555)


Alignment Details
Target: chr3 (Bit Score: 120; Significance: 2e-61; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 2215044 - 2215171
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2215044 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcatttgcttactt 2215143  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||||| ||||||    
T  2215144 gaaaaattattacctaaaaatctaagtg 2215171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 18351461 - 18351334
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18351461 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtatcccataggaacctcttacctagattatcttgtgctaaattcatttgcttactt 18351362  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||||| ||||||    
T  18351361 gaaaaattattacctaaaaatctaagtg 18351334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 27979015 - 27978895
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  27979015 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcatttgattactt 27978916  T
Q  117 gaaaaattattacctaaaaat 137  Q
    |||||||||||||||||||||    
T  27978915 gaaaaattattacctaaaaat 27978895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 14426061 - 14425934
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||    
T  14426061 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacatagattatcttgtgctagattcatttgcttactt 14425962  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||||| ||||||    
T  14425961 gaaaaattattacctaaaaatctaagtg 14425934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 2256855 - 2256730
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  2256855 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattctgtaggaacctcttacctaaattatcttgtgctaaattc-attgcttattt 2256757  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  2256756 g-aaaattattacctaaaaatctaagtg 2256730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 18041334 - 18041208
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| | ||||||| ||    
T  18041334 ttggttacacgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttaactaaattatcttgtgctaaattgatttgcttattt 18041235  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | || |||||||||||||||| ||||||    
T  18041234 g-aatattattacctaaaaatctaagtg 18041208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 43468197 - 43468323
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||| | ||||||| ||    
T  43468197 ttggttacgcgaagggaatgtgctagcaccctaagcgtctatggtattccatatgaacctcttacctaaattatcttgtgttaaattgatttgcttattt 43468296  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  43468297 g-aaaattattacctaaaaatctaagtg 43468323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 18949567 - 18949685
Alignment:
Q  16 attggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttact 115  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||||||| |||||||| |    
T  18949567 attggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccataggaacctcttacctaatctatcttgtgctaaattc-attgcttatt 18949665  T
Q  116 tgaaaaattattacctaaaaa 136  Q
    || ||||||||||||||||||    
T  18949666 tg-aaaattattacctaaaaa 18949685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 5144391 - 5144509
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   ||||||| ||    
T  5144391 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaactt-tgttgcttattt 5144489  T
Q  117 g-aaaaattattacctaaaa 135  Q
    | ||||||||||||||||||    
T  5144490 gaaaaaattattacctaaaa 5144509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 17935504 - 17935378
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||  ||||||||||||||||| | ||||||| ||    
T  17935504 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtactccgtaggaacctcttacctaatttatcttgtgctaaattgatttgcttattt 17935405  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  17935404 g-aaaattattacctaaaaatctaagtg 17935378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 18900462 - 18900583
Alignment:
Q  21 ttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaa 120  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||| ||    
T  18900462 ttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaaattatcttgtgctaaattc-attgcttatttg-aa 18900559  T
Q  121 aattattacctaaaaatttaagtg 144  Q
    ||||||||||||||| | ||||||    
T  18900560 aattattacctaaaagtctaagtg 18900583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 27338986 - 27339111
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  27338986 ttggttacgcgaagggaaggtgctagcaccctatgcgtctacggtattccgtaggaacctcttacctaaattatcttgtgctaaattc-attgcttattt 27339084  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||| | ||||||    
T  27339085 g-aaaattattacctaaaagtctaagtg 27339111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 30062755 - 30062872
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||||||||||||| |||||||| ||    
T  30062755 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattc-attgcttattt 30062853  T
Q  117 gaaaaattattacctaaaaa 136  Q
    | ||||||||||||||||||    
T  30062854 g-aaaattattacctaaaaa 30062872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 51922187 - 51922313
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||| | ||| ||| ||    
T  51922187 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaagaacctcttacctagattatcttgtgctaaattgatttgtttattt 51922286  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||| | ||||||    
T  51922287 g-aaaattattacctaaaagtctaagtg 51922313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 6564032 - 6563917
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  | | ||| ||| ||    
T  6564032 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaagct-acttgtttattt 6563934  T
Q  117 gaaaaattattacctaa 133  Q
    ||||||||||| |||||    
T  6563933 gaaaaattattgcctaa 6563917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 6577701 - 6577586
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  | | ||| ||| ||    
T  6577701 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaagct-acttgtttattt 6577603  T
Q  117 gaaaaattattacctaa 133  Q
    ||||||||||| |||||    
T  6577602 gaaaaattattgcctaa 6577586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 29730540 - 29730655
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | | ||| ||| ||    
T  29730540 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacctagattattttgtgctaaact-acttgtttattt 29730638  T
Q  117 gaaaaattattacctaa 133  Q
    ||||||||||| |||||    
T  29730639 gaaaaattattgcctaa 29730655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 4435856 - 4435731
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  ||||||||||||| |||| |||||||| ||    
T  4435856 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctacattc-attgcttattt 4435758  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||| | ||||||    
T  4435757 g-aaaattattacctaaaagtctaagtg 4435731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 8204155 - 8204281
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| |||||||||||||||||| | ||||||| ||    
T  8204155 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaaattatcttgtgctaaattgatttgcttattt 8204254  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||| | ||||||    
T  8204255 g-aaaattattacctaaaagtctaagtg 8204281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 13507367 - 13507492
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||  |||||||||||||||||| |||||||| ||    
T  13507367 ttggttacgcgaagggaaggtgctagcatcctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattc-attgcttattt 13507465  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||| | ||||||    
T  13507466 g-aaaattattacctaaaagtctaagtg 13507492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 15697157 - 15697035
Alignment:
Q  21 ttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaa 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||| ||||||    
T  15697157 ttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttgcctaatttatcttgtgctaaattc-attgcttatttgaaa 15697059  T
Q  121 aattattacctaaaaatttaagtg 144  Q
      |  |||||||||||| ||||||    
T  15697058 gttatttacctaaaaatctaagtg 15697035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 17360506 - 17360380
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| ||| |||||||||||||||||  ||||||||||||||||| | ||||||| ||    
T  17360506 ttggttacgcgaagggaaggtgttagcaccctaagcgtctacggtactccgtaggaacctcttacctaatttatcttgtgctaaattgatttgcttattt 17360407  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  17360406 g-aaaattattacctaaaaatctaagtg 17360380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 17365148 - 17365022
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| ||| |||||||||||||||||  ||||||||||||||||| | ||||||| ||    
T  17365148 ttggttacgcgaagggaaggtgttagcaccctaagcgtctacggtactccgtaggaacctcttacctaatttatcttgtgctaaattgatttgcttattt 17365049  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  17365048 g-aaaattattacctaaaaatctaagtg 17365022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 39707275 - 39707149
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| |||||||||||||||||| | ||||||| ||    
T  39707275 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaaattatcttgtgctaaattgatttgcttattt 39707176  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||| ||||||||||| ||||||    
T  39707175 g-aaaattaatacctaaaaatctaagtg 39707149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 50826786 - 50826661
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  ||||||||||||||||||  ||||||| ||    
T  50826786 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattc-gttgcttattt 50826688  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||| | ||||||    
T  50826687 g-aaaattattacctaaaagtctaagtg 50826661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 50849067 - 50849192
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||  ||||||||||||||||||  ||||||| ||    
T  50849067 ttggttacgcgaagggaaggtgctagcaccctaagcgtctttggtattccgtaggaacctcttacctaatttatcttgtgctaaattc-gttgcttattt 50849165  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||| | ||||||    
T  50849166 g-aaaattattacctaaaagtctaagtg 50849192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 22952125 - 22952021
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| || | ||| ||||||    
T  22952125 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacttagattatcttgtgctaagtt-acttgtttactt 22952027  T
Q  117 gaaaaa 122  Q
    ||||||    
T  22952026 gaaaaa 22952021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 22966099 - 22965995
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| || | ||| ||||||    
T  22966099 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacttagattatcttgtgctaagtt-acttgtttactt 22966001  T
Q  117 gaaaaa 122  Q
    ||||||    
T  22966000 gaaaaa 22965995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 3712025 - 3711899
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||| || | ||||||||||||  ||||||||||||||||||| ||||||| ||    
T  3712025 ttggttacgcgaagggaaggtgctagcaccctaagcatctacggtattccgtatggacctcttacctaatttatcttgtgctaaattcatttgcttattt 3711926  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||| | ||||||    
T  3711925 g-aaaattattacctaaaagtctaagtg 3711899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 15711447 - 15711325
Alignment:
Q  21 ttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaa 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||  |||||||||||||||||| |||||||| ||||||    
T  15711447 ttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccattggaacctcttgcctaatttatcttgtgctaaattc-attgcttatttgaaa 15711349  T
Q  121 aattattacctaaaaatttaagtg 144  Q
      |  |||||||||||| ||||||    
T  15711348 gttatttacctaaaaatctaagtg 15711325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 17630537 - 17630411
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  ||||||||||||||||| | ||||||| ||    
T  17630537 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattgatttgcttattt 17630438  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | |||||||||| |||||||| ||||||    
T  17630437 g-aaaattattatctaaaaatctaagtg 17630411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 41016823 - 41016697
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  ||||||||||||||||| | ||||||| ||    
T  41016823 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattgatttgcttattt 41016724  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | |||||||||| |||||||| ||||||    
T  41016723 g-aaaattattatctaaaaatctaagtg 41016697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 6293642 - 6293757
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||| || | | | ||| ||    
T  6293642 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacttagattattttgtgctaagtt-actcgtttattt 6293740  T
Q  117 gaaaaattattacctaa 133  Q
    ||||||||||| |||||    
T  6293741 gaaaaattattgcctaa 6293757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 13847794 - 13847898
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| || |||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| | ||||||| ||    
T  13847794 ttggttatgcaaaggaaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctagattatcttgtgctaaattgatttgcttattt 13847893  T
Q  117 gaaaa 121  Q
    |||||    
T  13847894 gaaaa 13847898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 25265028 - 25264944
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||    
T  25265028 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttatctagattatcttgtgctaaa 25264944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 25274522 - 25274438
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||    
T  25274522 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttatctagattatcttgtgctaaa 25274438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 4456647 - 4456522
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||| | |||||||||||||||||  ||||||||||||| |||| |||||||| ||    
T  4456647 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacgctatttcgtaggaacctcttacctaatttatcttgtgctacattc-attgcttattt 4456549  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||| | ||||||    
T  4456548 g-aaaattattacctaaaagtctaagtg 4456522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 8196344 - 8196470
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| ||||||| |||||||||||||||||||| |||| |||||||| ||||||||||||||||| |||||||||||||||||| | || |||| ||    
T  8196344 ttggttatgcgaaggtaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaaattatcttgtgctaaattgattttcttattt 8196443  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||| | ||||||    
T  8196444 g-aaaattattacctaaaagtctaagtg 8196470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 15694844 - 15694722
Alignment:
Q  21 ttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaa 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||  |||||||||||||||||| |||||||| ||||||    
T  15694844 ttacgcgaagggaaggtgctagcaccctaagcgtctatggtattatataggaacctcttgcctaatttatcttgtgctaaattc-attgcttatttgaaa 15694746  T
Q  121 aattattacctaaaaatttaagtg 144  Q
      |  |||||||||||| ||||||    
T  15694745 gttatttacctaaaaatctaagtg 15694722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 27550771 - 27550897
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  ||||||||||||||||| | ||||||| ||    
T  27550771 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattgatttgcttattt 27550870  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||| || |||||||| ||||||    
T  27550871 g-aaaattaatatctaaaaatctaagtg 27550897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 27957299 - 27957417
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||| ||||||||||||  ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||| | ||||||| ||    
T  27957299 ttggttacgcgaaggaaaggtgctagcattctaagcgtctacggtattccgtaggaacctcttacctaaattatcttgtgctaaattgatttgcttattt 27957398  T
Q  117 gaaaaattattacctaaaaa 136  Q
    | ||||||||| ||||||||    
T  27957399 g-aaaattattgcctaaaaa 27957417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 10713553 - 10713670
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||| | | ||| | | ||    
T  10713553 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctagattatcttgtgctaaaat-acttgttcattt 10713651  T
Q  117 gaaaaattattacctaaaa 135  Q
    ||||||||||| |||||||    
T  10713652 gaaaaattattgcctaaaa 10713670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 10720827 - 10720911
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaa 101  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  10720827 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctagattatcttgtgctaaa 10720911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 8153255 - 8153381
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| || ||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  ||| ||||||||||||| | ||||||| ||    
T  8153255 ttggttatgcaaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaatttaccttgtgctaaattgatttgcttattt 8153354  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||| | ||||||    
T  8153355 g-aaaattattacctaaaagtctaagtg 8153381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 144
Target Start/End: Original strand, 11918336 - 11918452
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  11918336 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattatt 11918435  T
Q  128 acctaaaaatttaagtg 144  Q
    |||||||||| ||||||    
T  11918436 acctaaaaatctaagtg 11918452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 144
Target Start/End: Original strand, 11932906 - 11933022
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  11932906 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattatt 11933005  T
Q  128 acctaaaaatttaagtg 144  Q
    |||||||||| ||||||    
T  11933006 acctaaaaatctaagtg 11933022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 15675197 - 15675281
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaa 101  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| ||||||||||||||||    
T  15675197 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaaattatcttgtgctaaa 15675281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 29 - 137
Target Start/End: Original strand, 7096606 - 7096715
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7096606 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattatt 7096705  T
Q  128 acctaaaaat 137  Q
    ||||||||||    
T  7096706 acctaaaaat 7096715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 29 - 137
Target Start/End: Original strand, 17616612 - 17616721
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17616612 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattatt 17616711  T
Q  128 acctaaaaat 137  Q
    ||||||||||    
T  17616712 acctaaaaat 17616721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 7063800 - 7063868
Alignment:
Q  69 aggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattattacctaaaaat 137  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7063800 aggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattattacctaaaaat 7063868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 15683739 - 15683823
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaa 101  Q
    ||||||| |||||||||||||||||||||||||||| |||| | |||||| ||||||||||||||||| ||||||||||||||||    
T  15683739 ttggttatgcgaagggaaggtgctagcaccctaagcatctacgatattccgtaggaacctcttacctaaattatcttgtgctaaa 15683823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 31278897 - 31278781
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31278897 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattatt 31278798  T
Q  128 acctaaaaatttaagtg 144  Q
     ||||||||| ||||||    
T  31278797 tcctaaaaatctaagtg 31278781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 13275120 - 13275003
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  13275120 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttggcttacttgaaaaattat 13275021  T
Q  127 tacctaaaaatttaagtg 144  Q
    ||||||||||| ||||||    
T  13275020 tacctaaaaatctaagtg 13275003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 24216123 - 24216227
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| | | ||| ||| |||||||||||||    
T  24216123 agggaaggtgttaagcaccctaaacgactatggtattccataggaacctcttacctagattatcttgtgctaaact-acttgtttatttgaaaaattatt 24216221  T
Q  128 acctaa 133  Q
     |||||    
T  24216222 gcctaa 24216227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 12469077 - 12468968
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  12469077 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttggcttacttgaaaaattat 12468978  T
Q  127 tacctaaaaa 136  Q
    ||||||||||    
T  12468977 tacctaaaaa 12468968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 16291111 - 16290995
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||  ||||||||||||||||||||||||||||| ||| ||||||||||||||||     
T  16291111 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaactgcttacctagattatcttgtgctaaattcatttgtttacttgaaaaattata 16291012  T
Q  128 acctaaaaatttaagtg 144  Q
    |||||||||| ||||||    
T  16291011 acctaaaaatctaagtg 16290995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 17562826 - 17562934
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  ||||||||  ||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  17562826 agggaaggtgttaagcaccctaaacgacttcggtattccgaaggaaccgcttacctaaattatcttgtgctaaattcatttggcttacttgaaaaattat 17562925  T
Q  127 tacctaaaa 135  Q
    |||||||||    
T  17562926 tacctaaaa 17562934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 13555627 - 13555541
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaatt 103  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| |||  |||||||| |||| ||  |||||||||||||||||    
T  13555627 ttggttacgcgaagggaaggtgttagcaccctaagcgtctacggtactccgcaggaaccttttacttaatttatcttgtgctaaatt 13555541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 134
Target Start/End: Original strand, 21185545 - 21185657
Alignment:
Q  21 ttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaa 120  Q
    |||||||||||||||||||| ||| |||||||||||| |||| | | |||||||||||| ||||  |||||||||| |||||| | ||||||| ||| ||    
T  21185545 ttacgcgaagggaaggtgctggcatcctaagcgtctacggtacttcgtaggaacctcttgcctaatttatcttgtgttaaattaatttgcttatttg-aa 21185643  T
Q  121 aattattacctaaa 134  Q
    ||||||| ||||||    
T  21185644 aattattgcctaaa 21185657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 1480299 - 1480191
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  1480299 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctaaattatcttgtgctaaattcatttggcttacttgaaaaattat 1480200  T
Q  127 tacctaaaa 135  Q
    |||||||||    
T  1480199 tacctaaaa 1480191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 4503494 - 4503602
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  4503494 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttggcttacttgaaaaattat 4503593  T
Q  127 tacctaaaa 135  Q
    || ||||||    
T  4503594 tatctaaaa 4503602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 16814560 - 16814635
Alignment:
Q  68 taggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattattacctaaaaatttaagtg 144  Q
    |||||||||||||||||  ||||||||||||||||| | ||||||| ||| ||||||||||||||||||| ||||||    
T  16814560 taggaacctcttacctaatttatcttgtgctaaattgatttgcttatttg-aaaattattacctaaaaatctaagtg 16814635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 18882055 - 18882095
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtcta 57  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18882055 ttggttacgcgaagggaaggtgctagcaccctaagcgtcta 18882095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 136
Target Start/End: Complemental strand, 30102286 - 30102225
Alignment:
Q  77 cttacctagattatcttgtgctaaattcaatt-gcttacttg-aaaaattattacctaaaaa 136  Q
    ||||||||||||||||||||||||||||  || ||||||||| |||||||||||||||||||    
T  30102286 cttacctagattatcttgtgctaaattcgtttggcttacttgaaaaaattattacctaaaaa 30102225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 1004289 - 1004352
Alignment:
Q  69 aggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattattacctaa 133  Q
    ||||||| ||||||||||||||||||||||||| | | ||| ||| ||||||||||||| |||||    
T  1004289 aggaaccgcttacctagattatcttgtgctaaact-acttgtttatttgaaaaattattgcctaa 1004352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 9567441 - 9567503
Alignment:
Q  59 ggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaa 121  Q
    ||||| ||||||||||||||| ||||  |||||||||| |||||| | ||||||| |||||||    
T  9567441 ggtatcccataggaacctcttgcctactttatcttgtgttaaattaatttgcttatttgaaaa 9567503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 18890344 - 18890400
Alignment:
Q  86 attatcttgtgctaaattcaattgcttacttgaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||||||| | ||||||    
T  18890344 attatcttgtgctaaattc-attgcttatttg-aaaattattacctaaaagtctaagtg 18890400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 27880596 - 27880524
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaa 100  Q
    |||||||||| || |||||| || || ||| |||||||| |||||||||||| ||||  ||||||||||||||    
T  27880596 agggaaggtgttaagcacccgaatcgactacggtattccgtaggaacctcttgcctactttatcttgtgctaa 27880524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 4e-59; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 16545689 - 16545562
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  16545689 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctatattatcttgtgctaaattcatttgcttactt 16545590  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||||| ||||||    
T  16545589 gaaaaattattacctaaaaatctaagtg 16545562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 16619973 - 16620100
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  16619973 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctatattatcttgtgctaaattcatttgcttactt 16620072  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||||| ||||||    
T  16620073 gaaaaattattacctaaaaatctaagtg 16620100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 10449569 - 10449442
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||| ||||||    
T  10449569 ttggttacgcgaagggaagatgctagcaccctaagcgtctatggtatcccataggaatctcttacctagattatcttgtgctaaattcatttgattactt 10449470  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||||| ||||||    
T  10449469 gaaaaattattacctaaaaatctaagtg 10449442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 17211523 - 17211397
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||  | |||||||||||||||||| ||||||||||||| ||||||||||    
T  17211523 ttggttacgcgaagggaatgtgctagcaccctaagcgtctatggtattccataaaaccctcttacctagattatcctgtgctaaattcatttgcttactt 17211424  T
Q  117 gaaaaattattacctaaaaatttaagt 143  Q
    ||||||||||||||||||||| |||||    
T  17211423 gaaaaattattacctaaaaatctaagt 17211397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 4661811 - 4661936
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  4661811 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaaattatcttgtgctaaattc-attgcttattt 4661909  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||| | ||||||    
T  4661910 g-aaaattattacctaaaagtctaagtg 4661936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 29082206 - 29082088
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   ||||||| ||    
T  29082206 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaactt-tgttgcttattt 29082108  T
Q  117 g-aaaaattattacctaaaa 135  Q
    | ||||||||||||||||||    
T  29082107 gaaaaaattattacctaaaa 29082088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 29096965 - 29096847
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   ||||||| ||    
T  29096965 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaactt-tgttgcttattt 29096867  T
Q  117 g-aaaaattattacctaaaa 135  Q
    | ||||||||||||||||||    
T  29096866 gaaaaaattattacctaaaa 29096847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 5199106 - 5199221
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||| ||| ||    
T  5199106 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaact-acttgtttattt 5199204  T
Q  117 gaaaaattattacctaa 133  Q
    ||||||||||| |||||    
T  5199205 gaaaaattattgcctaa 5199221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 19384037 - 19384152
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||| ||| ||    
T  19384037 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaact-acttgtttattt 19384135  T
Q  117 gaaaaattattacctaa 133  Q
    ||||||||||| |||||    
T  19384136 gaaaaattattgcctaa 19384152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 5208223 - 5208338
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||| ||| ||    
T  5208223 ttggttacgcgaagagaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaact-acttgtttattt 5208321  T
Q  117 gaaaaattattacctaa 133  Q
    ||||||||||| |||||    
T  5208322 gaaaaattattgcctaa 5208338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 16889677 - 16889792
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||  | | ||| ||||||    
T  16889677 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacctagattattttgtgctaagct-acttgtttactt 16889775  T
Q  117 gaaaaattattacctaa 133  Q
    ||||||||||| |||||    
T  16889776 gaaaaattattgcctaa 16889792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 27965884 - 27965999
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | | ||| ||| ||    
T  27965884 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacctagattattttgtgctaaact-acttgtttattt 27965982  T
Q  117 gaaaaattattacctaa 133  Q
    ||||||||||| |||||    
T  27965983 gaaaaattattgcctaa 27965999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 27975337 - 27975452
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | | ||| ||| ||    
T  27975337 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacctagattattttgtgctaaact-acttgtttattt 27975435  T
Q  117 gaaaaattattacctaa 133  Q
    ||||||||||| |||||    
T  27975436 gaaaaattattgcctaa 27975452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 13832986 - 13832861
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| || ||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  13832986 ttggttatgcaaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaaattatcttgtgctaaattc-attgcttattt 13832888  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  13832887 g-aaaattattacctaaaaatctaagtg 13832861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 13841016 - 13840891
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| || ||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  13841016 ttggttatgcaaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaaattatcttgtgctaaattc-attgcttattt 13840918  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  13840917 g-aaaattattacctaaaaatctaagtg 13840891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 16909761 - 16909887
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||  ||||||||||||||| ||| ||||||||||    
T  16909761 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtatcccgtaggaacctcttacctaacttatcttgtgctaaaatcatttgcttactt 16909860  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | |||||| ||| |||||||| ||||||    
T  16909861 g-aaaattgttagctaaaaatctaagtg 16909887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 18302988 - 18303114
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||  ||||||||||||||||| | ||||||| ||    
T  18302988 ttggttacgtgaagggaaggtgctagcaccctaagcgtctacggtattcagtaggaacctcttacctaatttatcttgtgctaaattgatttgcttattt 18303087  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  18303088 g-aaaattattacctaaaaatctaagtg 18303114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 17514275 - 17514390
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| | | ||| ||| ||    
T  17514275 ttggttacgcgaagggaaggtgctagcatcctaaacgtctatggtattccataggaacctcttacctagattattttgtgctaaact-acttgtttattt 17514373  T
Q  117 gaaaaattattacctaa 133  Q
    ||||||||||| |||||    
T  17514374 gaaaaattattgcctaa 17514390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 17538939 - 17538824
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| | | ||| ||| ||    
T  17538939 ttggttacgcgaagggaaggtgctagcatcctaaacgtctatggtattccataggaacctcttacctagattattttgtgctaaact-acttgtttattt 17538841  T
Q  117 gaaaaattattacctaa 133  Q
    ||||||||||| |||||    
T  17538840 gaaaaattattgcctaa 17538824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 4940219 - 4940344
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  |||||||||||||| ||| |||||||| ||    
T  4940219 ttggttacgcgaagggaaggtgctagcaccctaagcttctacggtattccgtaggaacctcttacctaatttatcttgtgctaagttc-attgcttattt 4940317  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||| | ||||||    
T  4940318 g-aaaattattacctaaaagtctaagtg 4940344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 17739308 - 17739426
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| ||||  ||||||||||||||||||| ||||||| ||    
T  17739308 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtactccgtaggaacctcttgcctaatttatcttgtgctaaattcatttgcttattt 17739407  T
Q  117 gaaaaattattacctaaaaa 136  Q
    | ||||||||| ||||||||    
T  17739408 g-aaaattattgcctaaaaa 17739426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 1886859 - 1886977
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatc-ttgtgctaaattcaattgcttact 115  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||  ||||| ||||||||||||| |||||||| |    
T  1886859 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtatcccgtaggaacctcttacctaatttatctttgtgctaaattc-attgcttatt 1886957  T
Q  116 tgaaaaattattacctaaaaa 136  Q
    || ||| ||||||||||||||    
T  1886958 tg-aaatttattacctaaaaa 1886977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 1900960 - 1901078
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatc-ttgtgctaaattcaattgcttact 115  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||  ||||| ||||||||||||| |||||||| |    
T  1900960 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtatcccgtaggaacctcttacctaatttatctttgtgctaaattc-attgcttatt 1901058  T
Q  116 tgaaaaattattacctaaaaa 136  Q
    || ||| ||||||||||||||    
T  1901059 tg-aaatttattacctaaaaa 1901078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 15185775 - 15185691
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaa 101  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||    
T  15185775 ttggttacgcgaagggaaggtgctagcatcctaagcgtccatggtattccataggaacctcttacctaaattattttgtgctaaa 15185691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 15200395 - 15200311
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaa 101  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||    
T  15200395 ttggttacgcgaagggaaggtgctagcatcctaagcgtccatggtattccataggaacctcttacctaaattattttgtgctaaa 15200311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 24186054 - 24186172
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatc-ttgtgctaaattcaattgcttact 115  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||  ||||| ||||||||||||| |||||||| |    
T  24186054 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtatcccgtaggaacctcttacctaatttatctttgtgctaaattc-attgcttatt 24186152  T
Q  116 tgaaaaattattacctaaaaa 136  Q
    || ||| ||||||||||||||    
T  24186153 tg-aaatttattacctaaaaa 24186172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 40680187 - 40680071
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40680187 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattatt 40680088  T
Q  128 acctaaaaatttaagtg 144  Q
    |||||||||| ||||||    
T  40680087 acctaaaaatctaagtg 40680071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 16227977 - 16227860
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  16227977 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttggcttacttgaaaaattat 16227878  T
Q  127 tacctaaaaatttaagtg 144  Q
    ||||||||||| ||||||    
T  16227877 tacctaaaaatctaagtg 16227860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 16244855 - 16244738
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  16244855 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttggcttacttgaaaaattat 16244756  T
Q  127 tacctaaaaatttaagtg 144  Q
    ||||||||||| ||||||    
T  16244755 tacctaaaaatctaagtg 16244738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 140 - 244
Target Start/End: Complemental strand, 1957049 - 1956945
Alignment:
Q  140 aagtgtttcctttgaacttctcaaaattagggactttgaacttgcgtggtatcacgacgttgggaaccaagcaaagatcataagcatttttcccaaacag 239  Q
    ||||||| |||||| | |||||||||| |||||||||||| ||| |||||||||| || |||| ||||||||||||||| ||||||||| | ||||||||    
T  1957049 aagtgttccctttgtatttctcaaaatcagggactttgaatttgggtggtatcacaacattggaaaccaagcaaagatcgtaagcatttattccaaacag 1956950  T
Q  240 ttctt 244  Q
    |||||    
T  1956949 ttctt 1956945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 13492004 - 13492090
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaatt 103  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||||| |||||||  | |||||||||||||||    
T  13492004 ttggttacgcgaagggaaggtgttagcaccctaagcgtctacggtactccgtaggaaccttttacctaattcatcttgtgctaaatt 13492090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 29023640 - 29023532
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  29023640 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttggcttacttgaaaaattat 29023541  T
Q  127 tacctaaaa 135  Q
    |||||||||    
T  29023540 tacctaaaa 29023532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 44075141 - 44075256
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||| ||| ||||||||| ||||||| |||| |||||| | |||||||||||||||||||||||||||||||||  | | ||| ||| ||    
T  44075141 ttggttatgcgaagtgaaagtgctagcatcctaagcatctacggtatttcgtaggaacctcttacctagattatcttgtgctaagct-acttgtttattt 44075239  T
Q  117 gaaaaattattacctaa 133  Q
    ||||||||||| |||||    
T  44075240 gaaaaattattgcctaa 44075256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 206
Target Start/End: Original strand, 4945726 - 4945792
Alignment:
Q  140 aagtgtttcctttgaacttctcaaaattagggactttgaacttgcgtggtatcacgacgttgggaac 206  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||| ||||||||    
T  4945726 aagtgtttcctttgtacttctcaaaattagggactttgaacttgggtggcatcacgacattgggaac 4945792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 27435474 - 27435365
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattca-attgcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| |||||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  27435474 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcattttgcttactcgaaaaattat 27435375  T
Q  127 tacctaaaaa 136  Q
    ||||||||||    
T  27435374 tacctaaaaa 27435365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 27444504 - 27444395
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattca-attgcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| |||||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  27444504 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcattttgcttactcgaaaaattat 27444405  T
Q  127 tacctaaaaa 136  Q
    ||||||||||    
T  27444404 tacctaaaaa 27444395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 29032035 - 29031970
Alignment:
Q  71 gaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattattacctaaaa 135  Q
    ||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  29032035 gaaccgcttacctagattatcttgtgctaaattcatttggcttacttgaaaaattattacctaaaa 29031970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 16120633 - 16120741
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  16120633 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctaaattatcttgtgctaaattcatttggcttacttgaaaaattat 16120732  T
Q  127 tacctaaaa 135  Q
    |||||||||    
T  16120733 tacctaaaa 16120741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 16147373 - 16147481
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  16147373 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctaaattatcttgtgctaaattcatttggcttacttgaaaaattat 16147472  T
Q  127 tacctaaaa 135  Q
    |||||||||    
T  16147473 tacctaaaa 16147481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 43139129 - 43139053
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatctt 93  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||| | |||||||||||| ||||  |||||||    
T  43139129 ttggttacgcgaagggaaggtgctagcatcctaagcgtctacggtatttcgtaggaacctcttgcctaatttatctt 43139053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 13478191 - 13478255
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttac 81  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||||| ||||    
T  13478191 ttggttacgcgaagggaaggtgttagcaccctaagcgtctacggtactccgtaggaaccttttac 13478255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 4949090 - 4949132
Alignment:
Q  202 ggaaccaagcaaagatcataagcatttttcccaaacagttctt 244  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4949090 ggaaccaagcaaagatcataagcatttttcccaaacagttctt 4949132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 558393 - 558497
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||| | | ||| ||| |||||||||||||    
T  558393 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaact-acttgtttatttgaaaaattatt 558491  T
Q  128 acctaa 133  Q
     |||||    
T  558492 gcctaa 558497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 568303 - 568407
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||| | | ||| ||| |||||||||||||    
T  568303 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaact-acttgtttatttgaaaaattatt 568401  T
Q  128 acctaa 133  Q
     |||||    
T  568402 gcctaa 568407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 2549170 - 2549066
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||| | | ||| ||| |||||||||||||    
T  2549170 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaact-acttgtttatttgaaaaattatt 2549072  T
Q  128 acctaa 133  Q
     |||||    
T  2549071 gcctaa 2549066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 2563056 - 2562952
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||| | | ||| ||| |||||||||||||    
T  2563056 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaact-acttgtttatttgaaaaattatt 2562958  T
Q  128 acctaa 133  Q
     |||||    
T  2562957 gcctaa 2562952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 4e-59; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 55584284 - 55584411
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  55584284 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcatttgcttactt 55584383  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  55584384 ggaaaattattacctaaaaatctaagtg 55584411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 18010318 - 18010198
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  18010318 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcatttgattactt 18010219  T
Q  117 gaaaaattattacctaaaaat 137  Q
    |||||||||||||||||||||    
T  18010218 gaaaaattattacctaaaaat 18010198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 27341639 - 27341764
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  27341639 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcatttgcttact- 27341737  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
      ||||||||||||||||| | ||||||    
T  27341738 -gaaaattattacctaaaagtctaagtg 27341764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 26034088 - 26034214
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||    
T  26034088 ttggttacgcgaagggaaggtgttagcaccctaagcgtctatggtattccataggaacctcttacctaaattatcttgtgctaaattgatttgcttactt 26034187  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  26034188 g-aaaattattacctaaaaatctaagtg 26034214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 26210507 - 26210632
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||| ||    
T  26210507 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtatcccataggaacctcttacctagattatcttgtgctaaattc-attgtttattt 26210605  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  26210606 g-aaaattattacctaaaaatctaagtg 26210632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 26219267 - 26219392
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||| ||    
T  26219267 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtatcccataggaacctcttacctagattatcttgtgctaaattc-attgtttattt 26219365  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  26219366 g-aaaattattacctaaaaatctaagtg 26219392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 144
Target Start/End: Original strand, 25652574 - 25652700
Alignment:
Q  18 tggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttg 117  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||| |||  ||||||    
T  25652574 tggttacgcgaagggaaagtgctagcaccctaagcgtctacggtattccgtagaaacctcttacctagattatcttgtgctaaattcatttgggtacttg 25652673  T
Q  118 aaaaattattacctaaaaatttaagtg 144  Q
    |||||||||||||||||||| ||||||    
T  25652674 aaaaattattacctaaaaatctaagtg 25652700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 52297967 - 52297841
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||| | ||||||| ||    
T  52297967 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctaatttatcttgtgctgaattgatttgcttattt 52297868  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  52297867 g-aaaattattacctaaaaatctaagtg 52297841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 773426 - 773301
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  773426 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccataggaacctcttacctaaattatcttgtgctaaattc-attgcttattt 773328  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  773327 g-aaaattattacctaaaaatctaagtg 773301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 8092863 - 8092988
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||||||||||||| |||||||| ||    
T  8092863 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattc-attgcttattt 8092961  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  8092962 g-aaaattattacctaaaaatctaagtg 8092988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 8101668 - 8101793
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||||||||||||| |||||||| ||    
T  8101668 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattc-attgcttattt 8101766  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  8101767 g-aaaattattacctaaaaatctaagtg 8101793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 12425343 - 12425460
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  12425343 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaaattatcttgtgctaaattc-attgcttattt 12425441  T
Q  117 gaaaaattattacctaaaaa 136  Q
    | ||||||||||||||||||    
T  12425442 g-aaaattattacctaaaaa 12425460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 1875471 - 1875597
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  1875471 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaaattatcttgtgctaaattc-attgcttattt 1875569  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||| | | ||||||||||| ||||||    
T  1875570 gaaaattaactacctaaaaatctaagtg 1875597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 1889586 - 1889712
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  1889586 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaaattatcttgtgctaaattc-attgcttattt 1889684  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||| | | ||||||||||| ||||||    
T  1889685 gaaaattaactacctaaaaatctaagtg 1889712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 4522341 - 4522466
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  ||||||||||||| |||| |||| ||| ||    
T  4522341 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctacattc-attggttattt 4522439  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  4522440 g-aaaattattacctaaaaatctaagtg 4522466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 12998808 - 12998683
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||  |||||||||||||||||| |||||||| ||    
T  12998808 ttggttacgcgaagggaaggtgctagcaccctaagcgtctactgtattccgtaggaacctcttacctaatttatcttgtgctaaattc-attgctta-tt 12998711  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
     |||||||||||||||||| | ||||||    
T  12998710 taaaaattattacctaaaagtctaagtg 12998683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 20865786 - 20865911
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| || ||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  20865786 ttggttatgcaaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaaattatcttgtgctaaattc-attgcttattt 20865884  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  20865885 g-aaaattattacctaaaaatctaagtg 20865911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 10640623 - 10640498
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  ||||||||||||| |||| |||||||| ||    
T  10640623 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctacattc-attgcttattt 10640525  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||| ||||| | ||||||    
T  10640524 g-aaaattattacttaaaagtctaagtg 10640498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 21530232 - 21530359
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctctta-cctagattatcttgtgctaaattcaattgcttact 115  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||| |||| ||||||||||||||||||| |||||||| |    
T  21530232 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttaccctaaattatcttgtgctaaattc-attgcttatt 21530330  T
Q  116 tgaaaaattattacctaaaaatttaagtg 144  Q
    |||||| | | ||||||||||| ||||||    
T  21530331 tgaaaattaactacctaaaaatctaagtg 21530359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 4747528 - 4747611
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaa 100  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  4747528 ttggttacgcgaagggaaggtactagcatcctaagcgtctatggtattccataggaacctcttgcctaaattatcttgtgctaa 4747611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 144
Target Start/End: Original strand, 21398958 - 21399074
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || || ||||| |||  ||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  21398958 agggaaggtgttaagcaccctaaacgactttggtactccgaaggaaccgcttacctagattatcttgtgctagattcatttgcttacttgaaaaattatt 21399057  T
Q  128 acctaaaaatttaagtg 144  Q
    |||||||||| ||||||    
T  21399058 acctaaaaatctaagtg 21399074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 29 - 137
Target Start/End: Original strand, 14718635 - 14718744
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14718635 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattatt 14718734  T
Q  128 acctaaaaat 137  Q
    ||||||||||    
T  14718735 acctaaaaat 14718744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 29 - 137
Target Start/End: Original strand, 14736920 - 14737029
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14736920 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattatt 14737019  T
Q  128 acctaaaaat 137  Q
    ||||||||||    
T  14737020 acctaaaaat 14737029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 144
Target Start/End: Original strand, 25247293 - 25247410
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  25247293 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttggcttacttgaaaaattat 25247392  T
Q  127 tacctaaaaatttaagtg 144  Q
    ||||||||||| ||||||    
T  25247393 tacctaaaaatctaagtg 25247410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 34842924 - 34842807
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattg-cttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||| ||||||||||||||||||||||| ||| |||||||||||||||||    
T  34842924 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacatagattatcttgtgctaaattcatttggcttacttgaaaaattat 34842825  T
Q  127 tacctaaaaatttaagtg 144  Q
    ||||||||||| ||||||    
T  34842824 tacctaaaaatctaagtg 34842807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 19645001 - 19645109
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  19645001 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttggcttacttgaaaaattat 19645100  T
Q  127 tacctaaaa 135  Q
    |||||||||    
T  19645101 tacctaaaa 19645109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 19760052 - 19759944
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  19760052 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctaaattatcttgtgctaaattcaattggcttacttgaaaaattat 19759953  T
Q  127 tacctaaaa 135  Q
    |||||||||    
T  19759952 tacctaaaa 19759944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 19774808 - 19774700
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  19774808 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctaaattatcttgtgctaaattcaattggcttacttgaaaaattat 19774709  T
Q  127 tacctaaaa 135  Q
    |||||||||    
T  19774708 tacctaaaa 19774700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 10786885 - 10786777
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  10786885 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctaaattatcttgtgctaaattcatttggcttacttgaaaaattat 10786786  T
Q  127 tacctaaaa 135  Q
    |||||||||    
T  10786785 tacctaaaa 10786777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 21811004 - 21811112
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  21811004 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctaaattatcttgtgctaaattcatttggcttacttgaaaaattat 21811103  T
Q  127 tacctaaaa 135  Q
    |||||||||    
T  21811104 tacctaaaa 21811112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 144
Target Start/End: Original strand, 421 - 547
Alignment:
Q  18 tggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttg 117  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  421 tggttacccgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcatttgcttacttg 520  T
Q  118 aaaaattattacctaaaaatttaagtg 144  Q
    |||||||||||||||||||| ||||||    
T  521 aaaaattattacctaaaaatctaagtg 547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 63464 - 63337
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  63464 ttggttatgcgaagggaaggtgctagcaccctaagcgtctatggtatcccataggaacctcttacctagattatcttgtgctaaattcatttgcttactt 63365  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||||| ||||||    
T  63364 gaaaaattattacctaaaaatctaagtg 63337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 112; Significance: 1e-56; HSPs: 3)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 194994 - 194867
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  194994 ttggttacgcgaagagaaggtgctagcaccctaagcatctatggtattccataggaacctcttacctagattatcttgtgctaaattcatttgcttactt 194895  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||||| ||||||    
T  194894 gaaaaattattacctaaaaatctaagtg 194867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 188804 - 188686
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||||| ||||    
T  188804 ttggttacgcaaagggaaggtgctagcaccctaagcgtctatggtattccatatgatcctcttacctaaattatcttgtgctaaattcatttgctaactt 188705  T
Q  117 gaaaaattattacctaaaaa 136  Q
    | ||||||||||||||||||    
T  188704 g-aaaattattacctaaaaa 188686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 159335 - 159220
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||| ||| ||    
T  159335 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaact-acttgtttattt 159237  T
Q  117 gaaaaattattacctaa 133  Q
    ||||||||||| |||||    
T  159236 gaaaaattattgcctaa 159220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 1e-56; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 22103551 - 22103678
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||    
T  22103551 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacatagattatcttgtgctagattcatttgcttactt 22103650  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||||| ||||||    
T  22103651 gaaaaattattacctaaaaatctaagtg 22103678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 36252420 - 36252548
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36252420 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtatcccgtaggaacctcttacctagattatcttgtgctaaattcatttgcttactt 36252519  T
Q  117 g-aaaaattattacctaaaaatttaagtg 144  Q
    | |||||||||||||||||||| ||||||    
T  36252520 gaaaaaattattacctaaaaatctaagtg 36252548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 25719294 - 25719176
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||     
T  25719294 ttggttacgcgaagggaaggtgctagcaccttaagcgtctacggtattccgtaggaacctcttacctagattatcttgtgctaaattcatttgcttactc 25719195  T
Q  117 gaaaaattattacctaaaa 135  Q
    |||||||||||||||||||    
T  25719194 gaaaaattattacctaaaa 25719176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 17529308 - 17529183
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||||||||||||| |||||||| ||    
T  17529308 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattc-attgcttattt 17529210  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  17529209 g-aaaattattacctaaaaatctaagtg 17529183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 26871339 - 26871464
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||||||||||||| |||||||| ||    
T  26871339 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattc-attgcttattt 26871437  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  26871438 g-aaaattattacctaaaaatctaagtg 26871464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 36248985 - 36248860
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||||||||||||| |||||||| ||    
T  36248985 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattc-attgcttattt 36248887  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  36248886 g-aaaattattacctaaaaatctaagtg 36248860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 4837489 - 4837606
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||| |||||||| ||    
T  4837489 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctaatttatcttgtgctaatttc-attgcttattt 4837587  T
Q  117 gaaaaattattacctaaaaa 136  Q
    | |||||||| |||||||||    
T  4837588 g-aaaattatcacctaaaaa 4837606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 15832188 - 15832063
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  15832188 ttggttacgcaaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaaattatcttgtgctaaattc-attgcttattt 15832090  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||| | ||||||    
T  15832089 g-aaaattattacctaaaagtctaagtg 15832063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 21 - 133
Target Start/End: Original strand, 36576674 - 36576785
Alignment:
Q  21 ttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaa 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||| ||||||    
T  36576674 ttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttgcctaatttatcttgtgctaaattc-attgcttatttgaaa 36576772  T
Q  121 aattattacctaa 133  Q
     |||||| |||||    
T  36576773 gattattgcctaa 36576785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 4842934 - 4843051
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||| |||||||| ||    
T  4842934 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccttaggaacctcttacctaatttatcttgtgctaatttc-attgcttattt 4843032  T
Q  117 gaaaaattattacctaaaaa 136  Q
    | |||||||| |||||||||    
T  4843033 g-aaaattatcacctaaaaa 4843051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 16761077 - 16760951
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  16761077 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaaattatcttgtgctaaattc-attgcttattt 16760979  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||| | | ||||||||||| ||||||    
T  16760978 gaaaattaactacctaaaaatctaagtg 16760951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 16775514 - 16775388
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  16775514 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaaattatcttgtgctaaattc-attgcttattt 16775416  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||| | | ||||||||||| ||||||    
T  16775415 gaaaattaactacctaaaaatctaagtg 16775388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 17662395 - 17662520
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||  |||||||||||||||||| |||| ||| ||    
T  17662395 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtactccgtaggaacctcttacctaatttatcttgtgctaaattc-attggttattt 17662493  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  17662494 g-aaaattattacctaaaaatctaagtg 17662520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 17681524 - 17681649
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||  |||||||||||||||||| |||| ||| ||    
T  17681524 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtactccgtaggaacctcttacctaatttatcttgtgctaaattc-attggttattt 17681622  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  17681623 g-aaaattattacctaaaaatctaagtg 17681649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 25796809 - 25796693
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||  |||||||||||||||||| |||||||| ||    
T  25796809 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtaatccgtaggaacctcttacctaatttatcttgtgctaaattc-attgcttattt 25796711  T
Q  117 gaaaaattattacctaaaa 135  Q
    | |||||||||||||||||    
T  25796710 g-aaaattattacctaaaa 25796693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 4583843 - 4583717
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||| ||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||||| |||||| ||||||||||| | |||||||| |    
T  4583843 ttggttacacgaagagaaggtgctagcaccctaagtgtctacggtattccgtaggaacctcttacctaaattatcctgtgctaaattgatttgcttacat 4583744  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  4583743 g-aaaattattacctaaaaatctaagtg 4583717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 30939765 - 30939639
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  ||||||||||||||||| | ||||||| ||    
T  30939765 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattgatttgcttattt 30939666  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | |||||||||| |||||||| ||||||    
T  30939665 g-aaaattattatctaaaaatctaagtg 30939639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 39836137 - 39836263
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| || ||||||||||||||||||||||| | |||| |||||||| |||||||||||||||||  ||| ||||||||||||| | ||||||||||    
T  39836137 ttggttatgcaaagggaaggtgctagcaccctaaacatctacggtattccgtaggaacctcttacctaatttaccttgtgctaaattgatttgcttactt 39836236  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  39836237 g-aaaattattacctaaaaatctaagtg 39836263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 39844179 - 39844305
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| || ||||||||||||||||||||||||| |||| |||||||  |||||||||||||||||  ||| ||||||||||||| | ||||||||||    
T  39844179 ttggttatgcaaagggaaggtgctagcaccctaagcatctacggtattctgtaggaacctcttacctaatttaccttgtgctaaattgatttgcttactt 39844278  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  39844279 g-aaaattattacctaaaaatctaagtg 39844305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 25584978 - 25585096
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| || ||||||||||||||||||| ||||| |||| |||||||| ||||||||||||||||| |||| |||||||||||||| |||||||| ||    
T  25584978 ttggttatgcaaagggaaggtgctagcaccataagcatctacggtattccgtaggaacctcttacctaaattaccttgtgctaaattc-attgcttattt 25585076  T
Q  117 gaaaaattattacctaaaaat 137  Q
    | |||||||||||||||||||    
T  25585077 g-aaaattattacctaaaaat 25585096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 17975915 - 17975790
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||| |||||||||||| |||| ||| |||||||||||||||||  |||||||||||||||||| ||||||||  |    
T  17975915 ttggttacgcgaagggaaggtgctagcatcctaagcgtctacggtactccgtaggaacctcttacctaatttatcttgtgctaaattc-attgcttatct 17975817  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||| ||||||||||||| | ||||||    
T  17975816 g-aaagttattacctaaaagtctaagtg 17975790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 23922979 - 23923096
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||| |||||| |||||||||||| |||||||| |||||||||||| ||||  ||||||||||||||||| | ||||||| ||    
T  23922979 ttggttacgcgaagggaaggtactagcatcctaagcgtctacggtattccgtaggaacctcttgcctaatttatcttgtgctaaattaatttgcttattt 23923078  T
Q  117 gaaaaattattacctaaaa 135  Q
    | ||||||||| |||||||    
T  23923079 g-aaaattattgcctaaaa 23923096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 19851015 - 19850930
Alignment:
Q  59 ggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattattacctaaaaatttaagtg 144  Q
    |||| |||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  19851015 ggtactccaaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattattacctaaaaatctaagtg 19850930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 19857051 - 19856966
Alignment:
Q  59 ggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattattacctaaaaatttaagtg 144  Q
    |||| |||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  19857051 ggtactccaaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattattacctaaaaatctaagtg 19856966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 1388219 - 1388323
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| || ||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  ||| ||||||||||||| | ||||||||||    
T  1388219 ttggttatgcaaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaatttaccttgtgctaaattgatttgcttactt 1388318  T
Q  117 gaaaa 121  Q
    |||||    
T  1388319 gaaaa 1388323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 23092973 - 23092857
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23092973 agggaaggtgttaagcaccctaaacgacttaggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattatt 23092874  T
Q  128 acctaaaaatttaagtg 144  Q
    |||||||||| ||||||    
T  23092873 acctaaaaatctaagtg 23092857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 29 - 137
Target Start/End: Original strand, 31207635 - 31207744
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31207635 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattatt 31207734  T
Q  128 acctaaaaat 137  Q
    ||||||||||    
T  31207735 acctaaaaat 31207744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 14204762 - 14204646
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  14204762 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattattttgtgctaaattcatttgcttacttgaaaaattatt 14204663  T
Q  128 acctaaaaatttaagtg 144  Q
    |||||||||| ||||||    
T  14204662 acctaaaaatctaagtg 14204646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 14219403 - 14219287
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  14219403 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattattttgtgctaaattcatttgcttacttgaaaaattatt 14219304  T
Q  128 acctaaaaatttaagtg 144  Q
    |||||||||| ||||||    
T  14219303 acctaaaaatctaagtg 14219287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 26912652 - 26912755
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||| ||| |||||||||||| |||| ||||||||||||||||||   ||||||| ||    
T  26912652 ttggttacgcgaagggaaggtgctatcaccctaagcgtctacggtactccgtaggaacctcttgccta-attatcttgtgctaaattattttgcttattt 26912750  T
Q  117 gaaaa 121  Q
    |||||    
T  26912751 gaaaa 26912755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 144
Target Start/End: Original strand, 6582813 - 6582930
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttg-aaaaattat 126  Q
    |||||||||| || ||||||||| || || ||||| |||  | ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  6582813 agggaaggtgttaagcaccctaaacgactttggtactccgaatgaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaaattat 6582912  T
Q  127 tacctaaaaatttaagtg 144  Q
    ||||||||||| ||||||    
T  6582913 tacctaaaaatctaagtg 6582930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 22418379 - 22418262
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  22418379 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttggcttacttgaaaaattat 22418280  T
Q  127 tacctaaaaatttaagtg 144  Q
    ||||||||||| ||||||    
T  22418279 tacctaaaaatctaagtg 22418262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 17129505 - 17129429
Alignment:
Q  69 aggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattattacctaaaaatttaagtg 144  Q
    ||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||    
T  17129505 aggaaccgcttacctagattatcttgtgctaaattcatttggcttacttgaaaaattattacctaaaaatctaagtg 17129429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 14335866 - 14335952
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaatt 103  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||||| |||| ||  |||||||||||||||||    
T  14335866 ttggttacgcgaagggaaggtgttagcaccctaagcgtctacggtactccgtaggaaccttttacttaacttatcttgtgctaaatt 14335952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 23600983 - 23601069
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaatt 103  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||||| |||| ||  |||||||||||||||||    
T  23600983 ttggttacgcgaagggaaggtgttagcaccctaagcgtctacggtactccgtaggaaccttttacttaatttatcttgtgctaaatt 23601069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 22366864 - 22366973
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattca-attgcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| |||||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  22366864 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcattttgcttactcgaaaaattat 22366963  T
Q  127 tacctaaaaa 136  Q
    ||||||||||    
T  22366964 tacctaaaaa 22366973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 16190528 - 16190636
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  16190528 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctaaattatcttgtgctaaattcatttggcttacttgaaaaattat 16190627  T
Q  127 tacctaaaa 135  Q
    |||||||||    
T  16190628 tacctaaaa 16190636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 31000744 - 31000852
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  31000744 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctaaattatcttgtgctaaattcatttggcttacttgaaaaattat 31000843  T
Q  127 tacctaaaa 135  Q
    |||||||||    
T  31000844 tacctaaaa 31000852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 1e-56; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 43596633 - 43596760
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  43596633 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctaaattatcttgtgctaaattcatttgcttactt 43596732  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||| | ||||||    
T  43596733 gaaaaattattacctaaaagtctaagtg 43596760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 43629427 - 43629554
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  43629427 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctaaattatcttgtgctaaattcatttgcttactt 43629526  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||| | ||||||    
T  43629527 gaaaaattattacctaaaagtctaagtg 43629554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 23348669 - 23348795
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||| | ||||||| ||    
T  23348669 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaaattatcttgtgctaaattgatttgcttattt 23348768  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||| ||||||||||| ||||||    
T  23348769 g-aaaattactacctaaaaatctaagtg 23348795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 140 - 244
Target Start/End: Complemental strand, 20379751 - 20379647
Alignment:
Q  140 aagtgtttcctttgaacttctcaaaattagggactttgaacttgcgtggtatcacgacgttgggaaccaagcaaagatcataagcatttttcccaaacag 239  Q
    |||||||||||| | | ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20379751 aagtgtttccttggtatttctcaaaattagggactttgaacttgggtggtatcacgacattgggaaccaagcaaagatcataagcatttttcccaaacag 20379652  T
Q  240 ttctt 244  Q
    |||||    
T  20379651 ttctt 20379647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 1726746 - 1726863
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||||||||||||| |||||||| ||    
T  1726746 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattc-attgcttattt 1726844  T
Q  117 gaaaaattattacctaaaaa 136  Q
    | ||||||||||||||||||    
T  1726845 g-aaaattattacctaaaaa 1726863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 41093677 - 41093795
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||| ||||||||||||||||||| |||| |||||||| |||||||||||||||||  ||||||||||||||||| | ||||||| ||    
T  41093677 ttggttacgcgaaggggaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattgatttgcttattt 41093776  T
Q  117 gaaaaattattacctaaaa 135  Q
    |||||||||||||||||||    
T  41093777 gaaaaattattacctaaaa 41093795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 19226103 - 19225986
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||||||||||||| |||||||| ||    
T  19226103 ttggttacgcgaaggggaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattc-attgcttattt 19226005  T
Q  117 gaaaaattattacctaaaaa 136  Q
    | ||||||||||||||||||    
T  19226004 g-aaaattattacctaaaaa 19225986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 11802474 - 11802558
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaa 101  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11802474 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacctagattattttgtgctaaa 11802558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 11812550 - 11812634
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaa 101  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11812550 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacctagattattttgtgctaaa 11812634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 26078484 - 26078603
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttac-t 115  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |   | |||||| |    
T  26078484 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacctaaattattttgtgctaaactacttggcttactt 26078583  T
Q  116 tgaaaaattattacctaaaa 135  Q
    ||||| ||||||||||||||    
T  26078584 tgaaagattattacctaaaa 26078603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 26088463 - 26088582
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttac-t 115  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |   | |||||| |    
T  26088463 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacctaaattattttgtgctaaactacttggcttactt 26088562  T
Q  116 tgaaaaattattacctaaaa 135  Q
    ||||| ||||||||||||||    
T  26088563 tgaaagattattacctaaaa 26088582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 28845425 - 28845299
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| || ||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  ||| ||||||||||||| | ||||||||||    
T  28845425 ttggttatgcaaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaatttaccttgtgctaaattgatttgcttactt 28845326  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  28845325 g-aaaattattacctaaaaatctaagtg 28845299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 28854035 - 28853909
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| || ||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  ||| ||||||||||||| | ||||||||||    
T  28854035 ttggttatgcaaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaatttaccttgtgctaaattgatttgcttactt 28853936  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  28853935 g-aaaattattacctaaaaatctaagtg 28853909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 12170256 - 12170340
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaa 101  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  12170256 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtatttcataggaacctcttacctagattattttgtgctaaa 12170340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 12179685 - 12179769
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaa 101  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  12179685 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtatttcataggaacctcttacctagattattttgtgctaaa 12179769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 21931639 - 21931551
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattca 105  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||||||||||||||    
T  21931639 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattca 21931551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 144
Target Start/End: Complemental strand, 31413090 - 31412966
Alignment:
Q  19 ggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttga 118  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  |||||||||||||| ||| |||||||| |||     
T  31413090 ggttacgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaacttatcttgtgctaagttc-attgcttatttg- 31412993  T
Q  119 aaaattattaccta-aaaatttaagtg 144  Q
    |||||||||||||| ||||| ||||||    
T  31412992 aaaattattacctagaaaatctaagtg 31412966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 20377985 - 20377870
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||  | | ||| ||| ||    
T  20377985 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctagattatcttgtgctaagct-acttgtttattt 20377887  T
Q  117 gaaaaattattacctaa 133  Q
    ||||||||||| |||||    
T  20377886 gaaaaattattgcctaa 20377870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 20386774 - 20386659
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||  | | ||| ||| ||    
T  20386774 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctagattatcttgtgctaagct-acttgtttattt 20386676  T
Q  117 gaaaaattattacctaa 133  Q
    ||||||||||| |||||    
T  20386675 gaaaaattattgcctaa 20386659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 29 - 144
Target Start/End: Original strand, 21858689 - 21858805
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21858689 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattatt 21858788  T
Q  128 acctaaaaatttaagtg 144  Q
    |||||||||||||||||    
T  21858789 acctaaaaatttaagtg 21858805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 3476892 - 3476975
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaa 100  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||    
T  3476892 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctagattatcttgtgctaa 3476975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 3491662 - 3491745
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaa 100  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||    
T  3491662 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctagattatcttgtgctaa 3491745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 31423998 - 31423882
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||| |||  |||||||||| | ||||| |||||||| ||    
T  31423998 ttggttacgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttatctaatttatcttgtgtttaattc-attgcttattt 31423900  T
Q  117 gaaaaattattacctaaaa 135  Q
    | |||||||||||||||||    
T  31423899 g-aaaattattacctaaaa 31423882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 144
Target Start/End: Original strand, 21850775 - 21850891
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21850775 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattatt 21850874  T
Q  128 acctaaaaatttaagtg 144  Q
    |||||||||| ||||||    
T  21850875 acctaaaaatctaagtg 21850891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 144
Target Start/End: Original strand, 21856936 - 21857052
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21856936 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattatt 21857035  T
Q  128 acctaaaaatttaagtg 144  Q
    |||||||||| ||||||    
T  21857036 acctaaaaatctaagtg 21857052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 140 - 244
Target Start/End: Original strand, 21865269 - 21865373
Alignment:
Q  140 aagtgtttcctttgaacttctcaaaattagggactttgaacttgcgtggtatcacgacgttgggaaccaagcaaagatcataagcatttttcccaaacag 239  Q
    ||||||| |||||| | |||||||||| ||||||||| || ||| ||||||| ||| | |||||||||||||||||||||||||||||||||||||||||    
T  21865269 aagtgttccctttgtatttctcaaaatcagggactttaaatttgggtggtattacggcattgggaaccaagcaaagatcataagcatttttcccaaacag 21865368  T
Q  240 ttctt 244  Q
    |||||    
T  21865369 ttctt 21865373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 23039314 - 23039198
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23039314 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattatt 23039215  T
Q  128 acctaaaaatttaagtg 144  Q
    |||||||||| ||||||    
T  23039214 acctaaaaatctaagtg 23039198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 33843956 - 33844071
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||| ||||||| |||| |||||||| |||||||||||||||||||||||||||||||||  | | ||| ||| ||    
T  33843956 ttggttatgcgaagggaaggtgctagcatcctaagcatctacggtattccgtaggaacctcttacctagattatcttgtgctaagct-acttgtttattt 33844054  T
Q  117 gaaaaattattacctaa 133  Q
    ||||||||||| |||||    
T  33844055 gaaaaattattgcctaa 33844071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 36458854 - 36458770
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaa 101  Q
    ||||||| |||||||||||||||||||| ||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  36458854 ttggttatgcgaagggaaggtgctagcatcctaagcatctacggtattccgtaggaacctcttacctagattatcttgtgctaaa 36458770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 24955421 - 24955546
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| |||  ||||||||||| | | ||||||| ||    
T  24955421 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttaccta-atttacttgtgctaaactgatttgcttattt 24955519  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | |||||||||| |||||||| ||||||    
T  24955520 g-aaaattattatctaaaaatctaagtg 24955546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 24963881 - 24964006
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| |||  ||||||||||| | | ||||||| ||    
T  24963881 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttaccta-atttacttgtgctaaactgatttgcttattt 24963979  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | |||||||||| |||||||| ||||||    
T  24963980 g-aaaattattatctaaaaatctaagtg 24964006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 29 - 143
Target Start/End: Original strand, 31548183 - 31548298
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31548183 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattatt 31548282  T
Q  128 acctaaaaatttaagt 143  Q
    |||||||||| |||||    
T  31548283 acctaaaaatctaagt 31548298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 29190355 - 29190269
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaatt 103  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| ||| |||||||||||||||||  |||||||||||||||||    
T  29190355 ttggttacgcgaagggaaggtgttagcaccctaagcgtctacggtactccgtaggaacctcttacctaatttatcttgtgctaaatt 29190269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 20396394 - 20396475
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgct 98  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||  ||||||||||||    
T  20396394 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttgcctaatttatcttgtgct 20396475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 29 - 137
Target Start/End: Complemental strand, 26177289 - 26177180
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26177289 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattatt 26177190  T
Q  128 acctaaaaat 137  Q
    ||||||||||    
T  26177189 acctaaaaat 26177180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 33835257 - 33835372
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| ||||| |||||||||||||| ||||||| |||| |||||||| |||||||||||||||||||||||||||||||||  | | ||| ||| ||    
T  33835257 ttggttatgcgaaaggaaggtgctagcatcctaagcatctacggtattccgtaggaacctcttacctagattatcttgtgctaagct-acttgtttattt 33835355  T
Q  117 gaaaaattattacctaa 133  Q
    ||||||||||| |||||    
T  33835356 gaaaaattattgcctaa 33835372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 23984961 - 23984844
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  23984961 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttggcttacttgaaaaattat 23984862  T
Q  127 tacctaaaaatttaagtg 144  Q
    ||||||||||| ||||||    
T  23984861 tacctaaaaatctaagtg 23984844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 17642643 - 17642568
Alignment:
Q  69 aggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattattacctaaaaatttaagtg 144  Q
    |||||||  |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||    
T  17642643 aggaaccgtttacctagattatcttgtgctaaattcattcgcttacttgaaaaattattacctaaaaatctaagtg 17642568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 345003 - 345089
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaatt 103  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||||| |||| ||  |||||||||||||||||    
T  345003 ttggttacgcgaagggaaggtgttagcaccctaagcgtctacggtactccgtaggaaccttttacttaatttatcttgtgctaaatt 345089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 27220280 - 27220352
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaa 100  Q
    |||||||||| || ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  27220280 agggaaggtgttaagcaccctaaacgactatggtattccataggaacctcttacctagattatcttgtgctaa 27220352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 27223287 - 27223359
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaa 100  Q
    |||||||||| || ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  27223287 agggaaggtgttaagcaccctaaacgactatggtattccataggaacctcttacctagattatcttgtgctaa 27223359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 27232758 - 27232830
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaa 100  Q
    |||||||||| || ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  27232758 agggaaggtgttaagcaccctaaacgactatggtattccataggaacctcttacctagattatcttgtgctaa 27232830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 359642 - 359728
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaatt 103  Q
    ||||||||||||||||||| || |||||||||||||||||| |||| ||| ||||||||| |||| ||  |||||||||||||||||    
T  359642 ttggttacgcgaagggaagatgttagcaccctaagcgtctacggtactccgtaggaaccttttacttaatttatcttgtgctaaatt 359728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 27064289 - 27064181
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  27064289 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctaaattatcttgtgctaaattcatttggcttacttgaaaaattat 27064190  T
Q  127 tacctaaaa 135  Q
    |||||||||    
T  27064189 tacctaaaa 27064181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 21986305 - 21986413
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  21986305 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctaaattatcttgtgctaaattcacttggcttacttgaaaaattat 21986404  T
Q  127 tacctaaaa 135  Q
    ||| |||||    
T  21986405 tacttaaaa 21986413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 21994953 - 21995061
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  21994953 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctaaattatcttgtgctaaattcacttggcttacttgaaaaattat 21995052  T
Q  127 tacctaaaa 135  Q
    ||| |||||    
T  21995053 tacttaaaa 21995061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 23637547 - 23637439
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| |||||||| |||||||||||||||||||| || |||||||| |||||||||    
T  23637547 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctaaattatcttgtgctaaattcatttggcttacttaaaaaattat 23637448  T
Q  127 tacctaaaa 135  Q
    |||||||||    
T  23637447 tacctaaaa 23637439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 23827885 - 23827993
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| |||||||| |||||||||||||||||||| || |||||||| |||||||||    
T  23827885 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctaaattatcttgtgctaaattcatttggcttacttaaaaaattat 23827984  T
Q  127 tacctaaaa 135  Q
    |||||||||    
T  23827985 tacctaaaa 23827993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 23835343 - 23835451
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| |||||||| |||||||||||||||||||| || |||||||| |||||||||    
T  23835343 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctaaattatcttgtgctaaattcatttggcttacttaaaaaattat 23835442  T
Q  127 tacctaaaa 135  Q
    |||||||||    
T  23835443 tacctaaaa 23835451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 23762462 - 23762527
Alignment:
Q  71 gaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattattacctaaaa 135  Q
    ||||| |||| ||| |||||||||||||||||||| || |||||||| ||||||||||||||||||    
T  23762462 gaaccgcttatctaaattatcttgtgctaaattcatttggcttacttaaaaaattattacctaaaa 23762527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 27586889 - 27586827
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctctt 79  Q
    |||||||||| ||||||||||| |||||||||||  |||||| ||| || |||||||||||||    
T  27586889 ttggttacgcaaagggaaggtgttagcaccctaaatgtctatagtactctataggaacctctt 27586827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 244
Target Start/End: Original strand, 20666637 - 20666678
Alignment:
Q  203 gaaccaagcaaagatcataagcatttttcccaaacagttctt 244  Q
    ||||||| ||||||||||||||||||||||| ||||||||||    
T  20666637 gaaccaaacaaagatcataagcatttttcccgaacagttctt 20666678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 98
Target Start/End: Original strand, 20370721 - 20370772
Alignment:
Q  47 ctaagcgtctatggtattccataggaacctcttacctagattatcttgtgct 98  Q
    ||||||||||| |||||||| |||||||||||||||||  ||||||| ||||    
T  20370721 ctaagcgtctacggtattccgtaggaacctcttacctaatttatcttttgct 20370772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 1e-56; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 28481476 - 28481349
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28481476 ttggttacgcgaagggaaggtgttagcaccctaagcgtctatggtatcccataggaacctcttacctagattatcttgtgctaaattcatttgcttactt 28481377  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||||| ||||||    
T  28481376 gaaaaattattacctaaaaatctaagtg 28481349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 35304831 - 35304704
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35304831 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctagattatcttgtgctaaattcatttgcttactt 35304732  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||| ||||||||||||||||||||||    
T  35304731 gaaaatttattacctaaaaatttaagtg 35304704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 21151565 - 21151447
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  21151565 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatattgtgctaaattcatttgcttactt 21151466  T
Q  117 gaaaaattattacctaaaa 135  Q
    |||||||||||||||||||    
T  21151465 gaaaaattattacctaaaa 21151447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 26896659 - 26896782
Alignment:
Q  21 ttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaa 120  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26896659 ttacgcgaagggaaggtgctagcaccctaagcatctatggtatcccataggaacctcttacctagattatcttgtgctaaattcatttgcttacttgaaa 26896758  T
Q  121 aattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||| ||||||    
T  26896759 atttattacctaaaaatctaagtg 26896782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 25496080 - 25495955
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||     
T  25496080 ttggttacgcaaagggaaggtgctagcaccctaagcgtctatggtattacataggaacctcttacctagattatcttgtgctaaattcatttgcttact- 25495982  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
      ||||||||||||||||||| ||||||    
T  25495981 -gaaaattattacctaaaaatctaagtg 25495955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 6856084 - 6856210
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||| ||    
T  6856084 ttggttacgcgaagggaaggtgttagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctgaattgatttgcttattt 6856183  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||| | ||||||    
T  6856184 g-aaaattattacctaaaagtctaagtg 6856210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 15600864 - 15600737
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||| ||||||| |||| |||||||| |||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  15600864 ttggttatgcgaagggaaggtgctagcatcctaagcatctacggtattccgtaggaaccgcttacctagattatcttgtgctaaatttatttgcttactt 15600765  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||||| ||||||    
T  15600764 gaaaaattattacctaaaaatctaagtg 15600737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 15943115 - 15943241
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  ||||||||||||||||| | ||||||||||    
T  15943115 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattgatttgcttactt 15943214  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  15943215 g-aaaattattacctaaaaatctaagtg 15943241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 15951625 - 15951751
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  ||||||||||||||||| | ||||||||||    
T  15951625 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattgatttgcttactt 15951724  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  15951725 g-aaaattattacctaaaaatctaagtg 15951751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 35040185 - 35040060
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||  |||||||||||||||||| |||||||| ||    
T  35040185 ttggttacgcgaagggaaggtgttagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattc-attgcttattt 35040087  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  35040086 g-aaaattattacctaaaaatctaagtg 35040060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 42247602 - 42247728
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||| | ||||||| ||    
T  42247602 ttggttatgcgaagggaaggtgctagcaccctaagcgtctacggtattccataggaacctcttacctaatttatcttgtgctaaattgatttgcttattt 42247701  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||| | ||||||    
T  42247702 g-aaaattattacctaaaagtctaagtg 42247728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 30524645 - 30524769
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  ||||||||||||| |||| |||||||| ||    
T  30524645 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctacattc-attgcttattt 30524743  T
Q  117 gaaaaattattacctaaaaatttaagt 143  Q
    | ||||||||||||||||||| |||||    
T  30524744 g-aaaattattacctaaaaatctaagt 30524769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 33306682 - 33306796
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||   ||||||||| ||    
T  33306682 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctagattatcttgtgctaaaaaaaattgcttattt 33306781  T
Q  117 gaaaaattattacct 131  Q
    |||||||||||||||    
T  33306782 gaaaaattattacct 33306796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 24287107 - 24286981
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||||||||||||| | ||||||| ||    
T  24287107 ttggttacgcgcagggaaggtgctagcaccctaagcgtctacggtattccgtaagaacctcttacctaaattatcttgtgctaaattgatttgcttattt 24287008  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||| | ||||||    
T  24287007 g-aaaattattacctaaaagtctaagtg 24286981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 24293675 - 24293549
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||| || |||||||||||||| |||||||||||||||||| | ||||||| ||    
T  24293675 ttggttacgcgcagggaaggtgctagcaccctaagcgtctacggtattccgtaagaacctcttacctaaattatcttgtgctaaattgatttgcttattt 24293576  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||| | ||||||    
T  24293575 g-aaaattattacctaaaagtctaagtg 24293549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 30690744 - 30690831
Alignment:
Q  157 ttctcaaaattagggactttgaacttgcgtggtatcacgacgttgggaaccaagcaaagatcataagcatttttcccaaacagttctt 244  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  30690744 ttctcaaaattagggactttgaacttgggtggtatcacgacattgggaaccaagcaaagatcataagcatttttcccaaacagttctt 30690831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 34068798 - 34068891
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgc 110  Q
    ||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34068798 ttggttacgcgaagggaaggtactagcgtcctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcatttgc 34068891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 20364656 - 20364773
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||| |||| ||| ||    
T  20364656 ttggttacgcgaaggaaatgtgctagcaccctaagcgtctacggtattccataggaacctcttacctaatttatcttgtgctaaattc-attggttattt 20364754  T
Q  117 gaaaaattattacctaaaaa 136  Q
    | ||||||||||||||||||    
T  20364755 g-aaaattattacctaaaaa 20364773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 34527973 - 34528099
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  ||||||||||||||||| | ||||||| ||    
T  34527973 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattgatttgcttattt 34528072  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||| ||||||||||| ||||||    
T  34528073 g-aaaattaatacctaaaaatctaagtg 34528099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 34541947 - 34542073
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  ||||||||||||||||| | ||||||| ||    
T  34541947 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattgatttgcttattt 34542046  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||| ||||||||||| ||||||    
T  34542047 g-aaaattaatacctaaaaatctaagtg 34542073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 35140104 - 35139978
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  ||||||||||||||||| | ||||||| ||    
T  35140104 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattgatttgcttattt 35140005  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | |||||||||| |||||||| ||||||    
T  35140004 g-aaaattattatctaaaaatctaagtg 35139978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 35148445 - 35148319
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  ||||||||||||||||| | ||||||| ||    
T  35148445 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattgatttgcttattt 35148346  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | |||||||||| |||||||| ||||||    
T  35148345 g-aaaattattatctaaaaatctaagtg 35148319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 41232442 - 41232568
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  ||||||||||||||||| | ||||||| ||    
T  41232442 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattgatttgcttattt 41232541  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | |||||||||| |||||||| ||||||    
T  41232542 g-aaaattattatctaaaaatctaagtg 41232568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 42564503 - 42564629
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| || ||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  ||| ||||||||||||| | ||||||||||    
T  42564503 ttggttatgcaaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaatttaccttgtgctaaattgatttgcttactt 42564602  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  42564603 g-aaaattattacctaaaaatctaagtg 42564629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 42573127 - 42573253
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| || ||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  ||| ||||||||||||| | ||||||||||    
T  42573127 ttggttatgcaaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaatttaccttgtgctaaattgatttgcttactt 42573226  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  42573227 g-aaaattattacctaaaaatctaagtg 42573253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 21111491 - 21111387
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||   ||||||| ||    
T  21111491 ttggttacgcgaagggaaggtgctagaaccctaagcgtctatggtattccgtaggaacctcttgcctaaattatcttgtgctaaattattttgcttattt 21111392  T
Q  117 gaaaa 121  Q
    |||||    
T  21111391 gaaaa 21111387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 140 - 244
Target Start/End: Complemental strand, 21114507 - 21114403
Alignment:
Q  140 aagtgtttcctttgaacttctcaaaattagggactttgaacttgcgtggtatcacgacgttgggaaccaagcaaagatcataagcatttttcccaaacag 239  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| | |||||||| || ||||||||||||||||||||||||| | |||||||||||||    
T  21114507 aagtgttccctttgtacttctcaaaattagggactttgaacttgggcggtatcacaacattgggaaccaagcaaagatcataagaacttttcccaaacag 21114408  T
Q  240 ttctt 244  Q
    |||||    
T  21114407 ttctt 21114403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 44375285 - 44375182
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  44375285 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaaattatcttgtgctaaattc-attgcttattt 44375187  T
Q  117 gaaaa 121  Q
    |||||    
T  44375186 gaaaa 44375182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 44390866 - 44390763
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  44390866 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaaattatcttgtgctaaattc-attgcttattt 44390768  T
Q  117 gaaaa 121  Q
    |||||    
T  44390767 gaaaa 44390763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 17685062 - 17685188
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||  ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  ||| ||||||||||||| | ||||||| ||    
T  17685062 ttggttacatgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttaccttgtgctaaattgatttgcttattt 17685161  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||| | ||||||    
T  17685162 g-aaaattattacctaaaagtctaagtg 17685188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 30683231 - 30683314
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaa 100  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30683231 ttggttacgcgaagggaaggtgttagcatcctaagcgtctatggtattccataggaacctcttacttagattatcttgtgctaa 30683314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 2653162 - 2653054
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||| || | ||| ||| ||    
T  2653162 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctagattatcttgtgctaagtt-acttgtttattt 2653064  T
Q  117 gaaaaattat 126  Q
    ||||||||||    
T  2653063 gaaaaattat 2653054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 3755012 - 3755120
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||| || | ||| ||| ||    
T  3755012 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctagattatcttgtgctaagtt-acttgtttattt 3755110  T
Q  117 gaaaaattat 126  Q
    ||||||||||    
T  3755111 gaaaaattat 3755120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 3765063 - 3765171
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||| || | ||| ||| ||    
T  3765063 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctagattatcttgtgctaagtt-acttgtttattt 3765161  T
Q  117 gaaaaattat 126  Q
    ||||||||||    
T  3765162 gaaaaattat 3765171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 26717627 - 26717745
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatc-ttgtgctaaattcaattgcttact 115  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||  ||||| ||||||||||||| |||||||| |    
T  26717627 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtatcccgtaggaacctcttacctaatttatctttgtgctaaattc-attgcttatt 26717725  T
Q  116 tgaaaaattattacctaaaaa 136  Q
    || ||| ||||||||||||||    
T  26717726 tg-aaatttattacctaaaaa 26717745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 26731760 - 26731878
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatc-ttgtgctaaattcaattgcttact 115  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||  ||||| ||||||||||||| |||||||| |    
T  26731760 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtatcccgtaggaacctcttacctaatttatctttgtgctaaattc-attgcttatt 26731858  T
Q  116 tgaaaaattattacctaaaaa 136  Q
    || ||| ||||||||||||||    
T  26731859 tg-aaatttattacctaaaaa 26731878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 29855473 - 29855389
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaa 101  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||    
T  29855473 ttggttacgcgaagggaaggtgctagcatcctaagcgtccatggtattccataggaacctcttacctaaattattttgtgctaaa 29855389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 20920965 - 20920839
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| ||||  ||||||||||||||||  | ||||||| ||    
T  20920965 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtactccgtaggaacctcttgcctaatttatcttgtgctaaatcaatttgcttattt 20920866  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||| |||||| || ||||||    
T  20920865 g-aaaattattgcctaaacatctaagtg 20920839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 16274893 - 16274777
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16274893 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattatt 16274794  T
Q  128 acctaaaaatttaagtg 144  Q
    |||||||||| ||||||    
T  16274793 acctaaaaatctaagtg 16274777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 133
Target Start/End: Complemental strand, 34437212 - 34437105
Alignment:
Q  25 gcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaatt 124  Q
    |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||  | | ||| ||| ||||||||||    
T  34437212 gcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctagattatcttgtgctaagct-acttgtttatttgaaaaatt 34437114  T
Q  125 attacctaa 133  Q
    ||| |||||    
T  34437113 attgcctaa 34437105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 42245668 - 42245561
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  ||||||||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  42245668 agggaaggtgttaagcaccctaaacgacttcggtattccgaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattatt 42245569  T
Q  128 acctaaaa 135  Q
    ||||||||    
T  42245568 acctaaaa 42245561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 29 - 137
Target Start/End: Original strand, 31354851 - 31354960
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31354851 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattatt 31354950  T
Q  128 acctaaaaat 137  Q
    ||||||||||    
T  31354951 acctaaaaat 31354960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 144
Target Start/End: Original strand, 10681463 - 10681579
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  10681463 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattatc 10681562  T
Q  128 acctaaaaatttaagtg 144  Q
    |||||||||| ||||||    
T  10681563 acctaaaaatctaagtg 10681579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 16284069 - 16283953
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  16284069 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgcaaaattcatttgcttacttgaaaaattatt 16283970  T
Q  128 acctaaaaatttaagtg 144  Q
    |||||||||| ||||||    
T  16283969 acctaaaaatctaagtg 16283953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 11622221 - 11622295
Alignment:
Q  69 aggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattattacctaaaaatttaagt 143  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  11622221 aggaaccgcttacttagattatcttgtgctaaattcatttgcttacttgaaaaattattacctaaaaatctaagt 11622295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 21320743 - 21320829
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaatt 103  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||||| |||||||  |||||||||||||||||    
T  21320743 ttggttacgcgaagggaaggtgttagcaccctaagcgtctacggtactccgtaggaaccttttacctaatttatcttgtgctaaatt 21320829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 42386238 - 42386134
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| | | ||| ||| |||||||||||||    
T  42386238 agggaaggtgttaagcaccctaaacgactatggtattccataggaacctcttacctagattatcttgtgctaaact-acttgtttatttgaaaaattatt 42386140  T
Q  128 acctaa 133  Q
     |||||    
T  42386139 gcctaa 42386134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 42401122 - 42401018
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| | | ||| ||| |||||||||||||    
T  42401122 agggaaggtgttaagcaccctaaacgactatggtattccataggaacctcttacctagattatcttgtgctaaact-acttgtttatttgaaaaattatt 42401024  T
Q  128 acctaa 133  Q
     |||||    
T  42401023 gcctaa 42401018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 14630539 - 14630453
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaatt 103  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||||| |||| ||  |||||||||||||||||    
T  14630539 ttggttacgcgaagggaaggtgttagcaccctaagcgtctacggtactccgtaggaaccttttacttaatttatcttgtgctaaatt 14630453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 19655687 - 19655773
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaatt 103  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||||| |||| ||  |||||||||||||||||    
T  19655687 ttggttacgcgaagggaaggtgttagcaccctaagcgtctacggtactccgtaggaaccttttacataatttatcttgtgctaaatt 19655773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 22187454 - 22187337
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattg-cttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| |||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  22187454 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctaaattatcttgtgctaaattcatttggcttacttgaaaaattat 22187355  T
Q  127 tacctaaaaatttaagtg 144  Q
    ||||||||||| ||||||    
T  22187354 tacctaaaaatctaagtg 22187337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 144
Target Start/End: Original strand, 21850261 - 21850378
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattg-cttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||| || |||||||||||||||||||| ||| |||||||||||||||||    
T  21850261 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacttaaattatcttgtgctaaattcatttggcttacttgaaaaattat 21850360  T
Q  127 tacctaaaaatttaagtg 144  Q
    ||||||||||| ||||||    
T  21850361 tacctaaaaatctaagtg 21850378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 144
Target Start/End: Original strand, 21858696 - 21858813
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattg-cttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||| || |||||||||||||||||||| ||| |||||||||||||||||    
T  21858696 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacttaaattatcttgtgctaaattcatttggcttacttgaaaaattat 21858795  T
Q  127 tacctaaaaatttaagtg 144  Q
    ||||||||||| ||||||    
T  21858796 tacctaaaaatctaagtg 21858813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 34685819 - 34685711
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  34685819 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctaaattatcttgtgctaaattcatttggcttacttgaaaaattat 34685720  T
Q  127 tacctaaaa 135  Q
    |||||||||    
T  34685719 tacctaaaa 34685711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 34708241 - 34708133
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  34708241 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctaaattatcttgtgctaaattcacttggcttacttgaaaaattat 34708142  T
Q  127 tacctaaaa 135  Q
    |||||||||    
T  34708141 tacctaaaa 34708133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 38154126 - 38154189
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctctta 80  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||    
T  38154126 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctctta 38154189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 39842135 - 39842174
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtct 56  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  39842135 ttggttacgcgaagggaaggtgctagcaccctaagcgtct 39842174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 27681062 - 27681172
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttg-aaaaatta 125  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||  || ||||||||| ||||||||    
T  27681062 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcgtttggcttacttgaaaaaatta 27681161  T
Q  126 ttacctaaaaa 136  Q
    ||||| |||||    
T  27681162 ttaccaaaaaa 27681172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 25493347 - 25493307
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtcta 57  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  25493347 ttggttacgcaaagggaaggtgctagcaccctaagcgtcta 25493307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 17881390 - 17881341
Alignment:
Q  30 gggaaggtgctagcaccctaagcgtctatggtattccataggaacctctt 79  Q
    ||||||||  ||||||||||| ||||||| |||||| |||||||||||||    
T  17881390 gggaaggtattagcaccctaaacgtctatagtattctataggaacctctt 17881341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 10655 - 10531
Alignment:
Q  20 gttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaa 119  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  10655 gttacgcgaagggaaggtgctagcaccttaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcatttgcatacttgaa 10556  T
Q  120 aaattattacctaaaaatttaagtg 144  Q
    |||||||||||||||||| ||||||    
T  10555 aaattattacctaaaaatctaagtg 10531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 9926 - 10053
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  9926 ttggttacgcgaagggaatgtgttagcaccctaagcgtctatggtattccatagaaacctcttacctagattatcttgtgctaaattcatttgcttactt 10025  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||||| ||||||    
T  10026 gaaaaattattacctaaaaatctaagtg 10053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 80465 - 80592
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  80465 ttggttacgcgaagggaacgtgctagcaccctaagcgtctatggtatcccataggaacctcttacctagattatcttgttctaaattcatttgcttactt 80564  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||||| ||||||    
T  80565 gaaaaattattacctaaaaatctaagtg 80592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 64063 - 64183
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  64063 ttggttacgcgaaaggaaggtgctagcaccctaagcgtctatggtatcccataggaacctcttacctagattatcttgtgctaaattcctttgcttactt 64162  T
Q  117 gaaaaattattacctaaaaat 137  Q
    |||||||||||||||||||||    
T  64163 gaaaaattattacctaaaaat 64183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 108; Significance: 2e-54; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 136445 - 136564
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  136445 ttggttacgcgaagggaaggtgctagcacgctaagtgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcatttgcttactt 136544  T
Q  117 gaaaaattattacctaaaaa 136  Q
    ||||||||||||||||||||    
T  136545 gaaaaattattacctaaaaa 136564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 145407 - 145526
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |    
T  145407 ttggttacgcggagggaaggtgctagcaccctaagcgtctatggtattccaaaggaacctcttacctagattatcttgtgctaaattcatttgcttacat 145506  T
Q  117 gaaaaattattacctaaaaa 136  Q
    ||||||||||||||||||||    
T  145507 gaaaaattattacctaaaaa 145526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 140 - 244
Target Start/End: Original strand, 143648 - 143752
Alignment:
Q  140 aagtgtttcctttgaacttctcaaaattagggactttgaacttgcgtggtatcacgacgttgggaaccaagcaaagatcataagcatttttcccaaacag 239  Q
    ||||||| |||||| |||||||||||| |||||| ||||| ||| |||||||||| || ||||||||||||||||||||||||| |||||||| ||||||    
T  143648 aagtgttccctttgtacttctcaaaatcagggaccttgaatttgggtggtatcacaacattgggaaccaagcaaagatcataagtatttttcctaaacag 143747  T
Q  240 ttctt 244  Q
    |||||    
T  143748 ttctt 143752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 2e-54; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 16302894 - 16303021
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  16302894 ttggttacgcgaagggaaggtgctagcaccttaagcgtctttggtattccataggaacctcttatctagattatcttgtgctaaattcatttgcttactt 16302993  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||||| ||||||    
T  16302994 gaaaaattattacctaaaaatctaagtg 16303021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 18205065 - 18205184
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  18205065 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacctagattattttgtgctaaattcatttgcttactt 18205164  T
Q  117 gaaaaattattacctaaaaa 136  Q
    ||||||||||||||||||||    
T  18205165 gaaaaattattacctaaaaa 18205184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 18220064 - 18220183
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  18220064 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacctagattattttgtgctaaattcatttgcttactt 18220163  T
Q  117 gaaaaattattacctaaaaa 136  Q
    ||||||||||||||||||||    
T  18220164 gaaaaattattacctaaaaa 18220183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 21708494 - 21708621
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  21708494 ttggttacgcgcagggaaggtgctagaaccctaagcgtctatggtattccatagaaacctcttacctagattatcttgtgctaaattcatttgcttactt 21708593  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||||| ||||||    
T  21708594 gaaaaattattacctaaaaatctaagtg 21708621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 24920711 - 24920584
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  24920711 ttggttacgcgaagggaaggtgttagcaccctaagcgtctatggtatcccataggaacctcttacctagattatcttgtgttaaatttatttgcttactt 24920612  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||| ||||||| ||||||    
T  24920611 gaaaaattattacttaaaaatctaagtg 24920584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 24485370 - 24485498
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattca-attgcttact 115  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||| |||  |||||||||    
T  24485370 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctagattatcttgtgctaaaatcattttgcttact 24485469  T
Q  116 tgaaaaattattacctaaaaatttaagtg 144  Q
    |||||||||||||||||||||| ||||||    
T  24485470 tgaaaaattattacctaaaaatctaagtg 24485498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 15389342 - 15389468
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  ||||||||||||||||||| ||||||| ||    
T  15389342 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattcatttgcttattt 15389441  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  15389442 g-aaaattattacctaaaaatctaagtg 15389468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 23927824 - 23927698
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||| ||    
T  23927824 ttggttacgcgaagagaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctaatttatcttgtgctaaattc-attgcttattt 23927726  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||| | ||||||||||||| ||||||    
T  23927725 gaaaattaattacctaaaaatctaagtg 23927698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 5996892 - 5996767
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||||||||||||| |||||||| ||    
T  5996892 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattc-attgcttattt 5996794  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    |||||||| |||||||||||| ||||||    
T  5996793 gaaaaatt-ttacctaaaaatctaagtg 5996767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 19826508 - 19826633
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  ||||||||||||| |||| |||||||||||    
T  19826508 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaacttatcttgtgctacattc-attgcttactt 19826606  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  19826607 g-aaaattattacctaaaaatctaagtg 19826633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 30823108 - 30823233
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||||||||||||| |||||||| ||    
T  30823108 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattc-attgcttattt 30823206  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  30823207 g-aaaattattacctaaaaatctaagtg 30823233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 13828028 - 13827925
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||| ||    
T  13828028 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctaatttatcttgtgctaaattc-attgcttattt 13827930  T
Q  117 gaaaa 121  Q
    |||||    
T  13827929 gaaaa 13827925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 27047176 - 27047291
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| || | ||| ||||||    
T  27047176 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacttagattatcttgtgctaagtt-acttgtttactt 27047274  T
Q  117 gaaaaattattacctaa 133  Q
    ||||||||||| |||||    
T  27047275 gaaaaattattgcctaa 27047291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 27057420 - 27057535
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| || | ||| ||||||    
T  27057420 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacttagattatcttgtgctaagtt-acttgtttactt 27057518  T
Q  117 gaaaaattattacctaa 133  Q
    ||||||||||| |||||    
T  27057519 gaaaaattattgcctaa 27057535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 27960511 - 27960391
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttac- 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || ||||||     
T  27960511 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacctaaattatcttatgctaaattcacttggcttact 27960412  T
Q  115 ttgaaaaattattacctaaaa 135  Q
    ||||||||||||| |||||||    
T  27960411 ttgaaaaattatttcctaaaa 27960391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 33300355 - 33300232
Alignment:
Q  20 gttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaa 119  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| | ||||||| ||| |    
T  33300355 gttacgcgaagggaaggtactagcaccctaagcgtctatggtattccatatgaacctcttacctaatttatcttgtgctaaattgatttgcttatttg-a 33300257  T
Q  120 aaattattacctaaaaatttaagtg 144  Q
    |||||||||||||||||| ||||||    
T  33300256 aaattattacctaaaaatctaagtg 33300232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 16589250 - 16589125
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| ||||| || ||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  16589250 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtatcccgtaggaacctcttacctagattatcttgtgctaaattc-attgcttattt 16589152  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  16589151 g-aaaattattacctaaaaatctaagtg 16589125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 16606130 - 16606255
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| ||||| || ||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  16606130 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtatcccgtaggaacctcttacctagattatcttgtgctaaattc-attgcttattt 16606228  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  16606229 g-aaaattattacctaaaaatctaagtg 16606255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 25993813 - 25993692
Alignment:
Q  21 ttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaa 120  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||||||||||||| |||||||| ||| ||    
T  25993813 ttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattc-attgcttatttg-aa 25993716  T
Q  121 aattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||| ||||||    
T  25993715 aattattacctaaaaatctaagtg 25993692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 30995454 - 30995537
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30995454 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaa 30995537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 143 - 244
Target Start/End: Complemental strand, 28306079 - 28305978
Alignment:
Q  143 tgtttcctttgaacttctcaaaattagggactttgaacttgcgtggtatcacgacgttgggaaccaagcaaagatcataagcatttttcccaaacagttc 242  Q
    ||||||||| | | ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28306079 tgtttccttggtatttctcaaaattagggactttgaacttgggtggtatcacgacattgggaaccaagcaaagatcataagcatttttcccaaacagttc 28305980  T
Q  243 tt 244  Q
    ||    
T  28305979 tt 28305978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 144 - 244
Target Start/End: Complemental strand, 28271109 - 28271009
Alignment:
Q  144 gtttcctttgaacttctcaaaattagggactttgaacttgcgtggtatcacgacgttgggaaccaagcaaagatcataagcatttttcccaaacagttct 243  Q
    |||||||| | | ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28271109 gtttccttggtatttctcaaaattagggactttgaacttgggtggtatcacgacattgggaaccaagcaaagatcataagcatttttcccaaacagttct 28271010  T
Q  244 t 244  Q
    |    
T  28271009 t 28271009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 144 - 244
Target Start/End: Complemental strand, 28349859 - 28349759
Alignment:
Q  144 gtttcctttgaacttctcaaaattagggactttgaacttgcgtggtatcacgacgttgggaaccaagcaaagatcataagcatttttcccaaacagttct 243  Q
    |||||||| | | ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28349859 gtttccttggtatttctcaaaattagggactttgaacttgggtggtatcacgacattgggaaccaagcaaagatcataagcatttttcccaaacagttct 28349760  T
Q  244 t 244  Q
    |    
T  28349759 t 28349759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 13492267 - 13492141
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| | ||||||| ||    
T  13492267 ttggttacgggaagggaatgtgctagcaccctaagcgtctatggtattccataggaacctcttgcctaatttatcttgtgctaaattgatttgcttattt 13492168  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | |||||||||| |||||||| ||||||    
T  13492167 g-aaaattattatctaaaaatctaagtg 13492141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 14475823 - 14475705
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  14475823 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaaattatcttgtgctaaattc-attgcttattt 14475725  T
Q  117 gaaaaattattacctaaaaa 136  Q
    ||||| | ||||||||||||    
T  14475724 gaaaattaattacctaaaaa 14475705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 16635648 - 16635523
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||||||||||||| |||| ||| ||    
T  16635648 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctagattattttgtgctaaattc-attgtttattt 16635550  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  16635549 g-aaaattattacctaaaaatctaagtg 16635523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 16645605 - 16645480
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||||||||||||| |||| ||| ||    
T  16645605 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctagattattttgtgctaaattc-attgtttattt 16645507  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  16645506 g-aaaattattacctaaaaatctaagtg 16645480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 25552646 - 25552525
Alignment:
Q  21 ttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaa 120  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||| |||| ||| ||| ||    
T  25552646 ttacgtgaagggaaggtgctagcaccctaagcgtctatggtattccttaggaacctcttacctaatttatcttgtgctaaattc-attgtttatttg-aa 25552549  T
Q  121 aattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||| ||||||    
T  25552548 aattattacctaaaaatctaagtg 25552525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 25713985 - 25713860
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||  |||||||||||||||||| ||||||||  |    
T  25713985 ttggttacgcgaagggaaggtgctagcaccctaagcgtctttggtattccgtaggaacctcttacctaatttatcttgtgctaaattc-attgcttatct 25713887  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||| ||||||||||||||| ||||||    
T  25713886 g-aaagttattacctaaaaatctaagtg 25713860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 35090265 - 35090391
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  ||||||||||||||||| | ||||||| ||    
T  35090265 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattgatttgcttattt 35090364  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  35090365 g-aaaattattacctaaaaatctaagtg 35090391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 20530626 - 20530742
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||||||||||||| |||||||| ||    
T  20530626 ttggtcacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattc-attgcttattt 20530724  T
Q  117 gaaaaattattacctaaaa 135  Q
    | |||||||||||||||||    
T  20530725 g-aaaattattacctaaaa 20530742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 12451445 - 12451564
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||| |||||||||||  | ||||||| ||    
T  12451445 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaaattattttgtgctaaatcaatttgcttattt 12451544  T
Q  117 gaaaaattattacctaaaaat 137  Q
    | |||||||||||||| ||||    
T  12451545 g-aaaattattacctagaaat 12451564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 18112163 - 18112079
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaa 101  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18112163 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacctagattattttgtgctaaa 18112079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 18126708 - 18126624
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaa 101  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18126708 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacctagattattttgtgctaaa 18126624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 27537649 - 27537523
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  ||||||||||||||||| | ||||||| ||    
T  27537649 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattgatttgcttattt 27537550  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | |||||||||| |||||||| ||||||    
T  27537549 g-aaaattattatctaaaaatctaagtg 27537523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 27551858 - 27551732
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  ||||||||||||||||| | ||||||| ||    
T  27551858 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattgatttgcttattt 27551759  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | |||||||||| |||||||| ||||||    
T  27551758 g-aaaattattatctaaaaatctaagtg 27551732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 5487050 - 5487166
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||  ||||||||||||||| || |||||||| ||    
T  5487050 ttggttacgcgaagggaaggtgctagcaccctaaacgtctacggtattccgtaggaacctcttacctaatttatcttgtgctaaaatc-attgcttattt 5487148  T
Q  117 gaaaaattattacctaaaa 135  Q
    | |||||||||||||||||    
T  5487149 g-aaaattattacctaaaa 5487166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 25654168 - 25654093
Alignment:
Q  69 aggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25654168 aggaacctcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattattacctaaaaatttaagtg 25654093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 28266750 - 28266666
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaa 101  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  28266750 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctagattatcttgtgctaaa 28266666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 28345499 - 28345415
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaa 101  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  28345499 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctagattatcttgtgctaaa 28345415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 28304464 - 28304380
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaa 101  Q
    ||||||| |||||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||||||||||||||||    
T  28304464 ttggttatgcgaagggaaggtgctagcaccctaagaatctacggtattccgtaggaacctcttacctagattatcttgtgctaaa 28304380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 28267720 - 28267806
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaatt 103  Q
    |||||||||| |||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||  |||||||||||||||||    
T  28267720 ttggttacgcaaagggaaggtgctagcaccctaagcgtctacggtactccgtaggaacctcttacctaatttatcttgtgctaaatt 28267806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 28346469 - 28346555
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaatt 103  Q
    |||||||||| |||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||  |||||||||||||||||    
T  28346469 ttggttacgcaaagggaaggtgctagcaccctaagcgtctacggtactccgtaggaacctcttacctaatttatcttgtgctaaatt 28346555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 11063911 - 11063825
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaatt 103  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||||| |||| ||  |||||||||||||||||    
T  11063911 ttggttacgcgaagggaaggtgttagcaccctaagcgtctacggtactccgtaggaaccttttacttaatttatcttgtgctaaatt 11063825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 21358553 - 21358661
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  21358553 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttggcttacttgaaaaattat 21358652  T
Q  127 tacctaaaa 135  Q
    |||||||||    
T  21358653 tacctaaaa 21358661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 23962535 - 23962643
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  23962535 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttggcttacttgaaaaattat 23962634  T
Q  127 tacctaaaa 135  Q
    |||||||||    
T  23962635 tacctaaaa 23962643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 23982645 - 23982753
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  23982645 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttggcttacttgaaaaattat 23982744  T
Q  127 tacctaaaa 135  Q
    |||||||||    
T  23982745 tacctaaaa 23982753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 8719781 - 8719848
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttaccta 84  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||| ||||    
T  8719781 ttggttacgcgaagggaaggtgttagcaccctaagcgtctatgttatcccataggaacctctttccta 8719848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 25693190 - 25693129
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctct 78  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||    
T  25693190 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaaactct 25693129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 25699831 - 25699770
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctct 78  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||    
T  25699831 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaaactct 25699770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 5008177 - 5008128
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattcc 66  Q
    ||||||| |||||||||||||||||||||||||||| |||| ||||||||    
T  5008177 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattcc 5008128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 16097768 - 16097691
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattca 105  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| |||||||||||||||||||||||||||||    
T  16097768 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattca 16097691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 13827925 - 13827868
Alignment:
Q  86 attatcttgtgctaaattcaattgcttacttgaaaaattattacctaaaaatttaagtg 144  Q
    |||| ||||||||||||||| ||||||| ||||| | ||||||||||||||| ||||||    
T  13827925 attancttgtgctaaattca-ttgcttatttgaacatttattacctaaaaatctaagtg 13827868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 2e-54; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 52101419 - 52101292
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  52101419 ttggttacgcaaagggaaggtgctagcaccctaagcgtctatgatattccataggaacctcttacctagattatcttgtgctaaattcatttgcttattt 52101320  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||||| ||||||    
T  52101319 gaaaaattattacctaaaaatctaagtg 52101292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 13452310 - 13452183
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  13452310 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattcatttgcttactt 13452211  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||||| ||||||    
T  13452210 gaaaaattattacctaaaaatctaagtg 13452183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 20502392 - 20502265
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  20502392 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtatcccgtaggaacctcttacctagattgtcttgtgctaaattcatttgcttactt 20502293  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||||| ||||||    
T  20502292 gaaaaattattacctaaaaatctaagtg 20502265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 28460056 - 28459929
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||  |||||||||||||||| |||||||||||||||||||| ||||||||||    
T  28460056 ttggttacgcgaagggaaggtgctagcaccctaaacgtctacggtattccgcaggaacctcttacctaaattatcttgtgctaaattcatttgcttactt 28459957  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    |||||||| |||||||||||| ||||||    
T  28459956 gaaaaattgttacctaaaaatctaagtg 28459929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 22479906 - 22479780
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||| || ||||||||||||||||| |||||||||||||||| | | ||||||||||    
T  22479906 ttggttacgcgaagggaaggtactagcaccctaagcgtctacggtatcccgtaggaacctcttaccta-attatcttgtgctaaaattatttgcttactt 22479808  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||||| ||||||    
T  22479807 gaaaaattattacctaaaaatctaagtg 22479780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 23952395 - 23952270
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||||||||||||| |||||||| ||    
T  23952395 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattc-attgcttattt 23952297  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  23952296 g-aaaattattacctaaaaatctaagtg 23952270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 28991233 - 28991358
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||||||||||||| |||||||| ||    
T  28991233 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattc-attgcttattt 28991331  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  28991332 g-aaaattattacctaaaaatctaagtg 28991358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 43456322 - 43456204
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||| | ||||||| ||    
T  43456322 ttggttacgcgaagggaaggtgctagcaccctaggcgtctatggtatttcataggaacctcttacctaaattatcttgtgctaaattgatttgcttattt 43456223  T
Q  117 gaaaaattattacctaaaaa 136  Q
    | ||||||||||||||||||    
T  43456222 g-aaaattattacctaaaaa 43456204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 38123553 - 38123668
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||| ||| ||    
T  38123553 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaact-acttgtttattt 38123651  T
Q  117 gaaaaattattacctaa 133  Q
    ||||||||||| |||||    
T  38123652 gaaaaattattgcctaa 38123668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 2385447 - 2385321
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||| |||||||||||||||||| | ||||||| ||    
T  2385447 ttggttacacgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttatctaaattatcttgtgctaaattgatttgcttattt 2385348  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  2385347 g-aaaattattacctaaaaatctaagtg 2385321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 3431528 - 3431653
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||||||||||||| |||| ||| ||    
T  3431528 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattc-attggttattt 3431626  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  3431627 g-aaaattattacctaaaaatctaagtg 3431653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 32135236 - 32135361
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||  |||||||||||||||||| |||||||| ||    
T  32135236 ttggttacgcgaagggaaggtgttagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattc-attgcttattt 32135334  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  32135335 g-aaaattattacctaaaaatctaagtg 32135361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 13803982 - 13804108
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| |||||||||||||||||| | ||||||| ||    
T  13803982 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaaattatcttgtgctaaattgatttgcttattt 13804081  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||| ||||||||||| ||||||    
T  13804082 g-aaaattactacctaaaaatctaagtg 13804108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 21497008 - 21497134
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||  ||||||||||||||||| | ||||||| ||    
T  21497008 ttggttacgcgaagggaaggtgctagcaccctaatcgtctacggtattccgtaggaacctcttacctaacttatcttgtgctaaattgatttgcttattt 21497107  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||| | ||||||    
T  21497108 g-aaaattattacctaaaagtctaagtg 21497134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 32608867 - 32608743
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||  ||||||||||||| |||| |||||||| ||    
T  32608867 ttggttacgcgaagggaaggtgttagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctacattc-attgcttattt 32608769  T
Q  117 gaaaaattattacctaaaaatttaagt 143  Q
    | ||||||||||||||||||| |||||    
T  32608768 g-aaaattattacctaaaaatctaagt 32608743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 23355541 - 23355655
Alignment:
Q  21 ttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaa 120  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||  ||||||||||||||||| | ||||||| ||| ||    
T  23355541 ttacgcgaagggaaggtgctagcaccctaagcgtctatgatatttcatatgaacctcttacctaatttatcttgtgctaaattgatttgcttatttg-aa 23355639  T
Q  121 aattattacctaaaaa 136  Q
    ||||||||||||||||    
T  23355640 aattattacctaaaaa 23355655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 31541436 - 31541310
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  ||||||||||||||||| | ||||||| ||    
T  31541436 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattgatttgcttattt 31541337  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | |||||||||| |||||||| ||||||    
T  31541336 g-aaaattattatctaaaaatctaagtg 31541310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 31550005 - 31549879
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  ||||||||||||||||| | ||||||| ||    
T  31550005 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattgatttgcttattt 31549906  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | |||||||||| |||||||| ||||||    
T  31549905 g-aaaattattatctaaaaatctaagtg 31549879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 41744629 - 41744746
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||  ||||| |||||||||||| |||||||| ||    
T  41744629 ttggttacgcgaagggaaggtgctagcaccctaaacgtctacggtattccgtaggaacctcttacctaatttatcctgtgctaaattc-attgcttattt 41744727  T
Q  117 gaaaaattattacctaaaaa 136  Q
    | ||||||||||||||||||    
T  41744728 g-aaaattattacctaaaaa 41744746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 13477315 - 13477190
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| ||| |||||||||| ||||||||||||| |||| ||||| || ||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  13477315 ttggttatgcgtagggaaggtgttagcaccctaagcatctacggtatcccgtaggaacctcttacctaaattatcttgtgctaaattc-attgcttattt 13477217  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  13477216 g-aaaattattacctaaaaatctaagtg 13477190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 35097505 - 35097609
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||  ||||||||||||||||| | ||||||| ||    
T  35097505 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattgatttgcttattt 35097604  T
Q  117 gaaaa 121  Q
    |||||    
T  35097605 gaaaa 35097609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 21244998 - 21245081
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaa 100  Q
    ||||||| |||||||||||||||||||| ||||||| |||| |||||||| |||||||||||||||||||||||||||||||||    
T  21244998 ttggttatgcgaagggaaggtgctagcatcctaagcatctacggtattccgtaggaacctcttacctagattatcttgtgctaa 21245081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 51055243 - 51055365
Alignment:
Q  21 ttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaa 120  Q
    ||||||||||||||| |||||||||||||| |||||| |||| |||||||||||||||| ||||  ||||||||||||||||| | ||||||| || |||    
T  51055243 ttacgcgaagggaagatgctagcaccctaaacgtctacggtactccataggaacctcttgcctaatttatcttgtgctaaattaatttgctta-tttaaa 51055341  T
Q  121 aattattacctaaaaatttaagtg 144  Q
    ||||||| ||||||| | ||||||    
T  51055342 aattattgcctaaaagtctaagtg 51055365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 29 - 137
Target Start/End: Original strand, 12464183 - 12464292
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12464183 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattatt 12464282  T
Q  128 acctaaaaat 137  Q
    ||||||||||    
T  12464283 acctaaaaat 12464292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 16135384 - 16135277
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16135384 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattatt 16135285  T
Q  128 acctaaaa 135  Q
    ||||||||    
T  16135284 acctaaaa 16135277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 22472822 - 22472705
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  22472822 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttggcttacttgaaaaattat 22472723  T
Q  127 tacctaaaaatttaagtg 144  Q
    ||||||||||| ||||||    
T  22472722 tacctaaaaatctaagtg 22472705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 31553623 - 31553519
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| | | ||| ||| |||||||||||||    
T  31553623 agggaaggtgttaagcaccctaaacgactatggtattccataggaacctcttacctagattatcttgtgctaaact-acttgtttatttgaaaaattatt 31553525  T
Q  128 acctaa 133  Q
     |||||    
T  31553524 gcctaa 31553519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 31562757 - 31562653
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| | | ||| ||| |||||||||||||    
T  31562757 agggaaggtgttaagcaccctaaacgactatggtattccataggaacctcttacctagattatcttgtgctaaact-acttgtttatttgaaaaattatt 31562659  T
Q  128 acctaa 133  Q
     |||||    
T  31562658 gcctaa 31562653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 3350707 - 3350779
Alignment:
Q  71 gaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattattacctaaaaatttaagt 143  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  3350707 gaaccgcttacttagattatcttgtgctaaattcatttgcttacttgaaaaattattacctaaaaatctaagt 3350779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 8240994 - 8241116
Alignment:
Q  21 ttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaa 120  Q
    |||||||||||||||||| ||||||||||||| |||| |||| ||| |||||| ||||| ||||  ||||||||||||||||| | ||||||| ||| ||    
T  8240994 ttacgcgaagggaaggtgatagcaccctaagcatctacggtactccgtaggaatctcttgcctaatttatcttgtgctaaattaatttgcttatttg-aa 8241092  T
Q  121 aattattacctaaaaatttaagtg 144  Q
    ||||||| ||||||| | ||||||    
T  8241093 aattattgcctaaaagtctaagtg 8241116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 13461205 - 13461138
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttaccta 84  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  13461205 ttggttacgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttaccta 13461138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 143
Target Start/End: Complemental strand, 21055152 - 21055031
Alignment:
Q  21 ttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaa 120  Q
    ||||||||||||||||||||||||| ||||||||||| |||| ||  |||||||||||| ||||  ||||| ||||||||||| | | ||||| ||| ||    
T  21055152 ttacgcgaagggaaggtgctagcactctaagcgtctacggtactctgtaggaacctcttgcctaatttatcctgtgctaaattaattcgcttatttg-aa 21055054  T
Q  121 aattattacctaaaaatttaagt 143  Q
    ||||||| ||||||||| |||||    
T  21055053 aattattgcctaaaaatctaagt 21055031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 46776928 - 46776994
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacct 83  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||    
T  46776928 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacct 46776994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 144
Target Start/End: Original strand, 34336750 - 34336868
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttg-aaaaatta 125  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||  || ||||||||| ||||||||    
T  34336750 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcgtttggcttacttgaaaaaatta 34336849  T
Q  126 ttacctaaaaatttaagtg 144  Q
    |||||||||||| ||||||    
T  34336850 ttacctaaaaatctaagtg 34336868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 25337171 - 25337131
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtcta 57  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  25337171 ttggttacgcgaagggaaggtgttagcaccctaagcgtcta 25337131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 32 - 144
Target Start/End: Complemental strand, 20028 - 19916
Alignment:
Q  32 gaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattattacct 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20028 gaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattattacct 19929  T
Q  132 aaaaatttaagtg 144  Q
    |||||| ||||||    
T  19928 aaaaatctaagtg 19916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 4772 - 4645
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4772 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctagattatcttgtgctaaattcatttgcttactt 4673  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||||| ||||||    
T  4672 gaaaaattattacctaaaaatctaagtg 4645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 46576 - 46703
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||  || |||    
T  46576 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtataccataggaacctcttacctagattatcttgtgctaaattcatttaattgctt 46675  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    ||||||||||||||||||||| ||||||    
T  46676 gaaaaattattacctaaaaatctaagtg 46703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 4503 - 4377
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  4503 ttggttacacgaagggaaggtgctagcactctaagcgtctatggtattccataggaacctcttacctaaattatcttgtgctaaattcatttgcttactt 4404  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
     |||||||||||||||||||| ||||||    
T  4403 -aaaaattattacctaaaaatctaagtg 4377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 15109 - 14983
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  15109 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacttagattatcttgtgctaaattcatttgcttactt 15010  T
Q  117 gaaaaattattacctaaaaatttaagt 143  Q
    ||||||||||||||||||||| |||||    
T  15009 gaaaaattattacctaaaaatctaagt 14983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 4632 - 4515
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||    
T  4632 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaaattatcttgtgctaaattc-attgcttattt 4534  T
Q  117 gaaaaattattacctaaaaa 136  Q
    | ||||||||||||||||||    
T  4533 g-aaaattattacctaaaaa 4515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 21578 - 21697
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||||||||||||||||   |||||| ||||||||||||||||| |||||||||||||||||| | ||||||||||    
T  21578 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacaatattccgtaggaacctcttacctaaattatcttgtgctaaattgatttgcttactt 21677  T
Q  117 gaaaaattattacctaaaaat 137  Q
    | |||||||||||||||||||    
T  21678 g-aaaattattacctaaaaat 21697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 109629 - 109511
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||||||||||||| |||||||| ||    
T  109629 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattccgtaggaacctcttacctaatttatcttgtgctaaattc-attgcttattt 109531  T
Q  117 gaaaaattattacctaaaaat 137  Q
    | |||||||||||||||||||    
T  109530 g-aaaattattacctaaaaat 109511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1804 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold1804
Description:

Target: scaffold1804; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 231 - 106
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||  |||||||||||||||||| |||||||| ||    
T  231 ttggttacgcgaagggaaggtgctagcaccctaagcgtctacggtattctgtaggaacctcttacctaatttatcttgtgctaaattc-attgcttattt 133  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  132 g-aaaattattacctaaaaatctaagtg 106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 30161 - 30044
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||| ||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  30161 ttggttacgcgaagggaagttgctagcaccctaagtgtctacggtattccgtaggaacctcttacctagattatcttgtgctaaattc-attgcttattt 30063  T
Q  117 gaaaaattattacctaaaaa 136  Q
    | ||||||||||||||||||    
T  30062 g-aaaattattacctaaaaa 30044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 22057 - 22172
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | | ||| ||| ||    
T  22057 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacctagattattttgtgctaaact-acttgtttattt 22155  T
Q  117 gaaaaattattacctaa 133  Q
    ||||||||||| |||||    
T  22156 gaaaaattattgcctaa 22172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1199 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold1199
Description:

Target: scaffold1199; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 2336 - 2419
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaa 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2336 ttggttacgcgaagggaaggtgctagcatcctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaa 2419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 67 - 192
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||||||||||||| |||| ||| ||    
T  67 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttacctagattattttgtgctaaattc-attgtttattt 165  T
Q  117 gaaaaattattacctaaaaatttaagtg 144  Q
    | ||||||||||||||||||| ||||||    
T  166 g-aaaattattacctaaaaatctaagtg 192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 10418 - 10291
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctctta-cctagattatcttgtgctaaattcaattgcttact 115  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||| |||| ||||||||||||||||||| |||||||| |    
T  10418 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaacctcttaccctaaattatcttgtgctaaattc-attgcttatt 10320  T
Q  116 tgaaaaattattacctaaaaatttaagtg 144  Q
    |||||| | | ||||||||||| ||||||    
T  10319 tgaaaattaactacctaaaaatctaagtg 10291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 29696 - 29799
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttactt 116  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||  |||||||||||||||||| |||||||| ||    
T  29696 ttggttacgcgaagggaaggtgctagcaccctaagcgtcgacggtattccgtaggaacctcttacctaatttatcttgtgctaaattc-attgcttattt 29794  T
Q  117 gaaaa 121  Q
    |||||    
T  29795 gaaaa 29799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 6088 - 6193
Alignment:
Q  139 taagtgtttcctttgaacttctcaaaattagggactttgaacttgcgtggtatcacgacgttgggaaccaagcaaagatcataagcatttttcccaaaca 238  Q
    |||||||| |||||| |||||||||||| |||||  ||||| ||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  6088 taagtgttccctttgtacttctcaaaatcagggatcttgaatttgggtggtatcacgacattgggaaccaaacaaagatcataagcatttttcccaaaca 6187  T
Q  239 gttctt 244  Q
     |||||    
T  6188 attctt 6193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 7875 - 7957
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgc 110  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| ||||    
T  7875 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttgc 7957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 29 - 143
Target Start/End: Complemental strand, 83653 - 83538
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  83653 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattatt 83554  T
Q  128 acctaaaaatttaagt 143  Q
    |||||||||| |||||    
T  83553 acctaaaaatctaagt 83538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 22847 - 22954
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22847 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctagattatcttgtgctaaattcatttgcttacttgaaaaattatt 22946  T
Q  128 acctaaaa 135  Q
    ||||||||    
T  22947 acctaaaa 22954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 63389 - 63303
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaatt 103  Q
    |||||||||||||||||||||  |||||||||||||||||| |||| ||| |||||||||||||||||  |||||||||||||||||    
T  63389 ttggttacgcgaagggaaggtattagcaccctaagcgtctacggtactccgtaggaacctcttacctaatttatcttgtgctaaatt 63303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 144
Target Start/End: Complemental strand, 32622 - 32548
Alignment:
Q  70 ggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattattacctaaaaatttaagtg 144  Q
    |||||||||||| ||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||| ||||||    
T  32622 ggaacctcttacttagattatcttatgctaaattcatttgattacttgaaaaattattacctaaaaatctaagtg 32548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 29899 - 29945
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtat 63  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  29899 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtat 29945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 137
Target Start/End: Original strand, 3709 - 3819
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaatt-gcttacttgaaaaattat 126  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||| ||||||||||||||||||||| || ||||||||||||||||||    
T  3709 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctggattatcttgtgctaaattcatttggcttacttgaaaaattat 3808  T
Q  127 tacctaaaaat 137  Q
    |||||||||||    
T  3809 tacctaaaaat 3819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1481 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1481
Description:

Target: scaffold1481; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 1722 - 1606
Alignment:
Q  29 agggaaggtgcta-gcaccctaagcgtctatggtattccataggaacctcttacctagattatcttgtgctaaattcaattgcttacttgaaaaattatt 127  Q
    |||||||||| || ||||||||| || ||  |||| |||  ||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||||||| |    
T  1722 agggaaggtgttaagcaccctaaacgacttcggtactccgaaggaaccgcttacctaagttatcttgtgctaaattcatttggttacttgaaaaattaat 1623  T
Q  128 acctaaaaatttaagtg 144  Q
    |||||||||| ||||||    
T  1622 acctaaaaatctaagtg 1606  T

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Target: scaffold0389 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 9842 - 9796
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtat 63  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  9842 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtat 9796  T

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Target: scaffold0233 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 15501 - 15557
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaa 73  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||    
T  15501 ttggttatgcgaagggaaggtgctagcaccctaagcatctacggtattccgtaggaa 15557  T

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Target: scaffold2020 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold2020
Description:

Target: scaffold2020; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 709 - 771
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctctt 79  Q
    ||||||||| |||||||||||| ||||||||||| |||||||  ||||| |||||||||||||    
T  709 ttggttacgtgaagggaaggtgttagcaccctaaacgtctatattattctataggaacctctt 771  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 164786 - 164724
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctctt 79  Q
    ||||||||| |||||||||||| ||||||||||| |||||||  ||||| |||||||||||||    
T  164786 ttggttacgtgaagggaaggtgttagcaccctaaacgtctatattattctataggaacctctt 164724  T

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Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 149571 - 149519
Alignment:
Q  27 gaagggaaggtgctagcaccctaagcgtctatggtattccataggaacctctt 79  Q
    |||||||||||| || |||||||| |||||||  ||||| |||||||||||||    
T  149571 gaagggaaggtgttaacaccctaaacgtctataatattctataggaacctctt 149519  T

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Target: scaffold0019 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 172604 - 172567
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaagcgt 54  Q
    |||||||||||||||||||||||||||| |||||||||    
T  172604 ttggttacgcgaagggaaggtgctagcatcctaagcgt 172567  T

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Target: scaffold0392 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0392
Description:

Target: scaffold0392; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 50
Target Start/End: Original strand, 16522 - 16555
Alignment:
Q  17 ttggttacgcgaagggaaggtgctagcaccctaa 50  Q
    ||||||| ||||||||||||||||||||||||||    
T  16522 ttggttatgcgaagggaaggtgctagcaccctaa 16555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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