View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6199_low_21 (Length: 250)
Name: NF6199_low_21
Description: NF6199
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6199_low_21 |
 |  |
|
| [»] chr5 (3 HSPs) |
 |  |
|
| [»] chr6 (5 HSPs) |
 |  |
|
| [»] chr2 (2 HSPs) |
 |  |
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| [»] chr7 (3 HSPs) |
 |  |
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| [»] scaffold0605 (1 HSPs) |
 |  |
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| [»] scaffold0023 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr5 (Bit Score: 228; Significance: 1e-126; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 11 - 250
Target Start/End: Original strand, 20379277 - 20379516
Alignment:
| Q |
11 |
cagagacagccattatctcatcctattgtcagcactcaggctcagacggttgcttccactaccccgatttcaacagtgtttgctagtagtcctcaacatg |
110 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20379277 |
cagagacaaccattatctcatcctgttgtcagcactcaggctcagacggttgcttccactaccccgatttcaacagtgtttgctagtagtcctcaacatg |
20379376 |
T |
 |
| Q |
111 |
ctatgcttgaaggttatctatggggcacaccctttggttctggtgaagtatttcgtcctgatgactctaaggttcaagctccttttgtgcaactgacaac |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20379377 |
ctatgcttgaaggttatctatggggcacaccctttggttctagtgaagtatttcgtcctgatgactctaaggttcaagctccttttgtgcaactgacaac |
20379476 |
T |
 |
| Q |
211 |
gcctatccctcaaccgggtcctttgttccctcaagctgct |
250 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20379477 |
gcctatccctcaaccgggtcctttgttccctcaagctgct |
20379516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 11 - 250
Target Start/End: Complemental strand, 21865743 - 21865504
Alignment:
| Q |
11 |
cagagacagccattatctcatcctattgtcagcactcaggctcagacggttgcttccactaccccgatttcaacagtgtttgctagtagtcctcaacatg |
110 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
21865743 |
cagagacagccattatctcttcctattgtcagcactcaagctgagaaggttgcttccactaccccgatttcaacagtgtttgcaagtactcctcaacatg |
21865644 |
T |
 |
| Q |
111 |
ctatgcttgaaggttatctatggggcacaccctttggttctggtgaagtatttcgtcctgatgactctaaggttcaagctccttttgtgcaactgacaac |
210 |
Q |
| |
|
||||||||||||||||||| ||| | ||||||||||||||| |||||||||| ||||| ||| |||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
21865643 |
ctatgcttgaaggttatctttggagtacaccctttggttctagtgaagtattccgtcccgatatctctaaagttcaagctccttttgtgcaactaacaac |
21865544 |
T |
 |
| Q |
211 |
gcctatccctcaaccgggtcctttgttccctcaagctgct |
250 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21865543 |
gcctatccctcaaccgggtcctttgttccctcaagctgct |
21865504 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 77 - 247
Target Start/End: Complemental strand, 20667000 - 20666830
Alignment:
| Q |
77 |
atttcaacagtgtttgctagtagtcctcaacatgctatgcttgaaggttatctatggggcacaccctttggttctggtgaagtatttcgtcctgatgact |
176 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||| ||||||||||||||| | || | || || || |
|
|
| T |
20667000 |
atttcaacagtgtttgctagtagtcctcaacatgctatgtttgaaggttatctctggagcacacccttcggttctggtgaagtactccgccttgttgtct |
20666901 |
T |
 |
| Q |
177 |
ctaaggttcaagctccttttgtgcaactgacaacgcctatccctcaaccgggtcctttgttccctcaagct |
247 |
Q |
| |
|
| ||||| |||||||||||||||| || | || | |||||||||| ||| |||||||||||||||||| |
|
|
| T |
20666900 |
ccaaggtccaagctccttttgtgccacatataatgtttatccctcaattgggccctttgttccctcaagct |
20666830 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 225; Significance: 1e-124; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 28270642 - 28270878
Alignment:
| Q |
14 |
agacagccattatctcatcctattgtcagcactcaggctcagacggttgcttccactaccccgatttcaacagtgtttgctagtagtcctcaacatgcta |
113 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28270642 |
agacaaccattatctcatcctattgtcagcactcaggatcagacggttgcttccactaccccgatttcaacagtgtttgctagtagtcctcaacatgcta |
28270741 |
T |
 |
| Q |
114 |
tgcttgaaggttatctatggggcacaccctttggttctggtgaagtatttcgtcctgatgactctaaggttcaagctccttttgtgcaactgacaacgcc |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28270742 |
tgcttgaaggttatctatggggcacaccctttggttctggtgaagtattttgtcctgatgactctaaggttcaagctccttttgtgcaactgacaacgcc |
28270841 |
T |
 |
| Q |
214 |
tatccctcaaccgggtcctttgttccctcaagctgct |
250 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28270842 |
tatccctcaaccgggtcctttgttccctcaagctgct |
28270878 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 28305611 - 28305847
Alignment:
| Q |
14 |
agacagccattatctcatcctattgtcagcactcaggctcagacggttgcttccactaccccgatttcaacagtgtttgctagtagtcctcaacatgcta |
113 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28305611 |
agacaaccattatctcatcctattgtcagcactcaggatcagacggttgcttccactaccccgatttcaacagtgtttgctagtagtcctcaacatgcta |
28305710 |
T |
 |
| Q |
114 |
tgcttgaaggttatctatggggcacaccctttggttctggtgaagtatttcgtcctgatgactctaaggttcaagctccttttgtgcaactgacaacgcc |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28305711 |
tgcttgaaggttatctatggggcacaccctttggttctggtgaagtattttgtcctgatgactctaaggttcaagctccttttgtgcaactgacaacgcc |
28305810 |
T |
 |
| Q |
214 |
tatccctcaaccgggtcctttgttccctcaagctgct |
250 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28305811 |
tatccctcaaccgggtcctttgttccctcaagctgct |
28305847 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 28349392 - 28349628
Alignment:
| Q |
14 |
agacagccattatctcatcctattgtcagcactcaggctcagacggttgcttccactaccccgatttcaacagtgtttgctagtagtcctcaacatgcta |
113 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28349392 |
agacaaccattatctcatcctattgtcagcactcaggatcagacggttgcttccactaccccgatttcaacagtgtttgctagtagtcctcaacatgcta |
28349491 |
T |
 |
| Q |
114 |
tgcttgaaggttatctatggggcacaccctttggttctggtgaagtatttcgtcctgatgactctaaggttcaagctccttttgtgcaactgacaacgcc |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28349492 |
tgcttgaaggttatctatggggcacaccctttggttctggtgaagtattttgtcctgatgactctaaggttcaagctccttttgtgcaactgacaacgcc |
28349591 |
T |
 |
| Q |
214 |
tatccctcaaccgggtcctttgttccctcaagctgct |
250 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28349592 |
tatccctcaaccgggtcctttgttccctcaagctgct |
28349628 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 16582432 - 16582667
Alignment:
| Q |
15 |
gacagccattatctcatcctattgtcagcactcaggctcagacggttgcttccactaccccgatttcaacagtgtttgctagtagtcctcaacatgctat |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
16582432 |
gacagccattatctcatcctattgtcagcactcaagctcagacagttgcttccactaccccgatttcaacagtgtttgctagtactcctcaacatgctat |
16582531 |
T |
 |
| Q |
115 |
gcttgaaggttatctatggggcacaccctttggttctggtgaagtatttcgtcctgatgactctaaggttcaagctccttttgtgcaactgacaacgcct |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
16582532 |
gcttgaaggttatctatggggcacaccctttggttctggtgaagtatttcgccctgatgtctctaaggttcaagctccttttgtgcaaccgacaacgcct |
16582631 |
T |
 |
| Q |
215 |
atccctcaaccgggtcctttgttccctcaagctgct |
250 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
16582632 |
atccctcaaccgggtcctttgttccctcaagctgct |
16582667 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 15 - 250
Target Start/End: Complemental strand, 16612948 - 16612713
Alignment:
| Q |
15 |
gacagccattatctcatcctattgtcagcactcaggctcagacggttgcttccactaccccgatttcaacagtgtttgctagtagtcctcaacatgctat |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
16612948 |
gacagccattatctcatcctattgtcagcactcaagctcagacagttgcttccactaccccgatttcaacagtgtttgctagtactcctcaacatgctat |
16612849 |
T |
 |
| Q |
115 |
gcttgaaggttatctatggggcacaccctttggttctggtgaagtatttcgtcctgatgactctaaggttcaagctccttttgtgcaactgacaacgcct |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
16612848 |
gcttgaaggttatctatggggcacaccctttggttctggtgaagtatttcgccctgatgtctctaaggttcaagctccttttgtgcaaccgacaacgcct |
16612749 |
T |
 |
| Q |
215 |
atccctcaaccgggtcctttgttccctcaagctgct |
250 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
16612748 |
atccctcaaccgggtcctttgttccctcaagctgct |
16612713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 11 - 250
Target Start/End: Complemental strand, 30691201 - 30690962
Alignment:
| Q |
11 |
cagagacagccattatctcatcctattgtcagcactcaggctcagacggttgcttccactaccccgatttcaacagtgtttgctagtagtcctcaacatg |
110 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30691201 |
cagagacaaccattatctcatcctgttgtcagcactcaggctcagacggttgcttccactaccccgatttcaacagtgtttgctagtagtcctcaacatg |
30691102 |
T |
 |
| Q |
111 |
ctatgcttgaaggttatctatggggcacaccctttggttctggtgaagtatttcgtcctgatgactctaaggttcaagctccttttgtgcaactgacaac |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30691101 |
ctatgcttgaaggttatctatggggcacaccctttggttcttgtgaagtattttgtcctgatgactctaaggttcaagctccttttgtgcaactgacaac |
30691002 |
T |
 |
| Q |
211 |
gcctatccctcaaccgggtcctttgttccctcaagctgct |
250 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
30691001 |
gcctatccctcaaccggttcctttgttccctcaagctgct |
30690962 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 11 - 250
Target Start/End: Original strand, 21114033 - 21114272
Alignment:
| Q |
11 |
cagagacagccattatctcatcctattgtcagcactcaggctcagacggttgcttccactaccccgatttcaacagtgtttgctagtagtcctcaacatg |
110 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |
|
|
| T |
21114033 |
cagagacagtcattatctcatcctattgtcagcattcaagctcagacggttgcttccactactccgatttcaatagtgtttgctagtagtcctcaacatg |
21114132 |
T |
 |
| Q |
111 |
ctatgcttgaaggttatctatggggcacaccctttggttctggtgaagtatttcgtcctgatgactctaaggttcaagctccttttgtgcaactgacaac |
210 |
Q |
| |
|
||||||||||||||||| | | ||||||||||||||||||| |||| ||||| | ||| |||| |||||||||||||| |||||||||||||| ||||| |
|
|
| T |
21114133 |
ctatgcttgaaggttatatctagggcacaccctttggttctagtgatgtattccttcccgatgtctctaaggttcaagttccttttgtgcaacagacaaa |
21114232 |
T |
 |
| Q |
211 |
gcctatccctcaaccgggtcctttgttccctcaagctgct |
250 |
Q |
| |
|
||||||| |||||| ||| | |||| |||||||| ||||| |
|
|
| T |
21114233 |
gcctatctctcaactgggccatttgctccctcaacctgct |
21114272 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 184; Significance: 1e-99; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 11 - 250
Target Start/End: Complemental strand, 4949502 - 4949263
Alignment:
| Q |
11 |
cagagacagccattatctcatcctattgtcagcactcaggctcagacggttgcttccactaccccgatttcaacagtgtttgctagtagtcctcaacatg |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
4949502 |
cagagacagccattatctcatcctattgtcagcactcagactcagacagttgcttccactaccccgatttcaacggtgtttgctagtactcctcaacatg |
4949403 |
T |
 |
| Q |
111 |
ctatgcttgaaggttatctatggggcacaccctttggttctggtgaagtatttcgtcctgatgactctaaggttcaagctccttttgtgcaactgacaac |
210 |
Q |
| |
|
||||||| ||||||||||| ||| | |||||||||| ||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4949402 |
ctatgctggaaggttatctttggagtacaccctttgattctggtgaagtattccgtcccgatgtctctaaggttcaagctccttttgtgcaactaacaac |
4949303 |
T |
 |
| Q |
211 |
gcctatccctcaaccgggtcctttgttccctcaagctgct |
250 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4949302 |
gcctatccctcaaccgggtcctttgttccctcaatctgct |
4949263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 36 - 223
Target Start/End: Complemental strand, 1959274 - 1959087
Alignment:
| Q |
36 |
ttgtcagcactcaggctcagacggttgcttccactaccccgatttcaacagtgtttgctagtagtcctcaacatgctatgcttgaaggttatctatgggg |
135 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| || |||||||||||||| || | | |||||||||||||||||| || |||||||| ||| | |
|
|
| T |
1959274 |
ttgtcagcactcaagctcagacggttgcttccactacacctatttcaacagtgttcgccaacactcctcaacatgctatgctggagggttatctctggag |
1959175 |
T |
 |
| Q |
136 |
cacaccctttggttctggtgaagtatttcgtcctgatgactctaaggttcaagctccttttgtgcaactgacaacgcctatccctcaa |
223 |
Q |
| |
|
|||||| || |||||||||||||||| ||||| | || |||| ||||||||||||| |||||||||| ||| ||||||||||||||| |
|
|
| T |
1959174 |
cacacctttaagttctggtgaagtattccgtcccgttgtctctgaggttcaagctccgtttgtgcaacagacgacgcctatccctcaa |
1959087 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 223
Target Start/End: Original strand, 1956601 - 1956806
Alignment:
| Q |
17 |
cagccattatctcatcctattgtcagcactcaggctcagacggttgcttccactaccccgatttcaacagtgtttgctagtagtcctcaacatgctatgc |
116 |
Q |
| |
|
||||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||| ||||||| |||| | |||| ||||| |
|
|
| T |
1956601 |
cagccattatctcttcctattgtcagcactcaagcttagaaggttgcttccactaccccgatttcaacagtgttcgctagtactccttatcatgttatgc |
1956700 |
T |
 |
| Q |
117 |
ttgaaggttatctatggggcacaccctttggttctggtgaagtatttcgtcctgatgactctaaggttcaagctccttttgtgcaactgacaacgcctat |
216 |
Q |
| |
|
||| |||||| || |||||| || ||| |||||||||||| |||| |||| |||| |||||||||||||||||||| | | ||| ||||| || |
|
|
| T |
1956701 |
ttgtgaattatctccggaacacacctttaagttttggtgaagtattatgtcc-gatgtctctgaggttcaagctccttttgtgaagcagacgacgccaat |
1956799 |
T |
 |
| Q |
217 |
ccctcaa |
223 |
Q |
| |
|
||||||| |
|
|
| T |
1956800 |
ccctcaa |
1956806 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0605 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: scaffold0605
Description:
Target: scaffold0605; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 11 - 250
Target Start/End: Complemental strand, 6563 - 6324
Alignment:
| Q |
11 |
cagagacagccattatctcatcctattgtcagcactcaggctcagacggttgcttccactaccccgatttcaacagtgtttgctagtagtcctcaacatg |
110 |
Q |
| |
|
||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
6563 |
cagagacagccattatctcttcctattgccagcactcaagctgagacggttgcttccactaccccgatttcaacagtgtttgctagtactcctcaacatg |
6464 |
T |
 |
| Q |
111 |
ctatgcttgaaggttatctatggggcacaccctttggttctggtgaagtatttcgtcctgatgactctaaggttcaagctccttttgtgcaactgacaac |
210 |
Q |
| |
|
||||||| ||||||||||| ||| ||||||||||||||| |||||||||||| | ||| | | |||||||||||||||||||||||||||||||||| | |
|
|
| T |
6463 |
ctatgctggaaggttatctttggagcacaccctttggttttggtgaagtattccatcccaacgtctctaaggttcaagctccttttgtgcaactgacagc |
6364 |
T |
 |
| Q |
211 |
gcctatccctcaaccgggtcctttgttccctcaagctgct |
250 |
Q |
| |
|
||| |||||||||||||||||||||||||||||| ||||| |
|
|
| T |
6363 |
gccgatccctcaaccgggtcctttgttccctcaatctgct |
6324 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 161; Significance: 6e-86; HSPs: 1)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 11 - 247
Target Start/End: Complemental strand, 144122 - 143886
Alignment:
| Q |
11 |
cagagacagccattatctcatcctattgtcagcactcaggctcagacggttgcttccactaccccgatttcaacagtgtttgctagtagtcctcaacatg |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||| ||||||||||| ||| |||||||||||||||||| |
|
|
| T |
144122 |
cagagacagccattatctcatcctattgtcagctctcaagctcagacggttgcttccaccaccccaatttcaacagtattttctagtagtcctcaacatg |
144023 |
T |
 |
| Q |
111 |
ctatgcttgaaggttatctatggggcacaccctttggttctggtgaagtatttcgtcctgatgactctaaggttcaagctccttttgtgcaactgacaac |
210 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
144022 |
ctatgcttgaaggttatctctggggcacaccctttggttctagtgaagtatttcgtcccgatatctccaaggttcaagctccctttgtgcaactgacaac |
143923 |
T |
 |
| Q |
211 |
gcctatccctcaaccgggtcctttgttccctcaagct |
247 |
Q |
| |
|
|| ||||||||| ||| ||| |||||||||||||| |
|
|
| T |
143922 |
accgatccctcaatcggaccctatgttccctcaagct |
143886 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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