View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6202_high_6 (Length: 316)
Name: NF6202_high_6
Description: NF6202
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6202_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 18 - 304
Target Start/End: Original strand, 249219 - 249501
Alignment:
| Q |
18 |
ataataaccatgtgtatattgcatgagaaagaacaaggtacttggtacatacatgcatacatacctggcaagagataactgtgtttagagaaagtgccgg |
117 |
Q |
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| T |
249219 |
ataataaccatgtgtatattgcatgagaaagaacaaggtacttggtacatacat----acatacctggcaagagataactgtgtttagagaaagtgccgg |
249314 |
T |
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| Q |
118 |
ttgagcaggcatcacaataaacaattccctcaacactgatagtggttgtgggagattgagcaatgagaacaaatggataactgaacagcagagatgtcag |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
249315 |
ttgagcaggcatcacaataaacaattccctcaacactgatagtggttgtgggagattgagcaatgagaacaaatggataactgaacagcagagatgtcag |
249414 |
T |
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| Q |
218 |
aagaaggaagaaaccaattggatccatgtggaatattggaatcaagcactttgacaaaattagctgctaccatattatgtatatatt |
304 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
249415 |
aagaaggaagaaaccaattggatccatgtggaatattggaatcaagcactttgacaaaattagctgctaccatattatgtatatatt |
249501 |
T |
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