View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6202_high_9 (Length: 305)

Name: NF6202_high_9
Description: NF6202
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6202_high_9
NF6202_high_9
[»] chr7 (36 HSPs)
chr7 (49-289)||(42256388-42256630)
chr7 (127-275)||(42261848-42261996)
chr7 (48-100)||(6792062-6792114)
chr7 (38-93)||(18186708-18186763)
chr7 (39-100)||(14247558-14247618)
chr7 (38-95)||(28472391-28472447)
chr7 (38-99)||(35250116-35250177)
chr7 (49-98)||(41243642-41243691)
chr7 (48-100)||(3318314-3318366)
chr7 (42-97)||(15347953-15348008)
chr7 (49-100)||(20184912-20184963)
chr7 (38-100)||(4049702-4049764)
chr7 (48-98)||(17931992-17932042)
chr7 (49-94)||(47909696-47909741)
chr7 (47-95)||(17876174-17876222)
chr7 (48-100)||(28786023-28786075)
chr7 (42-97)||(11373846-11373901)
chr7 (43-98)||(15107250-15107305)
chr7 (43-96)||(15029058-15029114)
chr7 (38-92)||(21505873-21505927)
chr7 (43-100)||(3292710-3292767)
chr7 (38-99)||(20505095-20505156)
chr7 (38-99)||(23826278-23826339)
chr7 (42-98)||(36204441-36204497)
chr7 (48-96)||(36903533-36903581)
chr7 (38-97)||(28350115-28350174)
chr7 (46-96)||(10097789-10097839)
chr7 (42-100)||(19645061-19645119)
chr7 (43-97)||(29163099-29163153)
chr7 (49-95)||(36903261-36903307)
chr7 (44-98)||(41445971-41446025)
chr7 (47-96)||(11742922-11742971)
chr7 (56-93)||(29834425-29834462)
chr7 (38-97)||(19644802-19644858)
chr7 (38-90)||(45717906-45717958)
chr7 (48-100)||(45718137-45718189)
[»] chr2 (35 HSPs)
chr2 (38-98)||(6592722-6592782)
chr2 (48-97)||(34679096-34679145)
chr2 (38-97)||(43028793-43028852)
chr2 (38-98)||(25333497-25333557)
chr2 (38-97)||(19399431-19399490)
chr2 (39-96)||(4576798-4576854)
chr2 (48-97)||(14943809-14943858)
chr2 (38-99)||(25375129-25375190)
chr2 (38-99)||(31827522-31827583)
chr2 (43-100)||(44297559-44297616)
chr2 (38-98)||(5362173-5362233)
chr2 (48-96)||(15022838-15022886)
chr2 (43-98)||(5470596-5470651)
chr2 (38-97)||(14489213-14489272)
chr2 (43-98)||(19206140-19206195)
chr2 (48-95)||(19399183-19399230)
chr2 (38-97)||(21361880-21361938)
chr2 (45-96)||(31827794-31827845)
chr2 (45-96)||(37803395-37803446)
chr2 (42-100)||(14489470-14489528)
chr2 (38-96)||(39918434-39918492)
chr2 (43-100)||(10741338-10741395)
chr2 (48-97)||(36715560-36715609)
chr2 (42-99)||(41454509-41454566)
chr2 (48-100)||(31025871-31025923)
chr2 (38-97)||(25379-25438)
chr2 (38-97)||(21358361-21358420)
chr2 (43-97)||(2755210-2755264)
chr2 (43-97)||(32661403-32661457)
chr2 (39-97)||(41454798-41454856)
chr2 (42-100)||(44245228-44245286)
chr2 (46-99)||(12948886-12948939)
chr2 (49-98)||(24472711-24472760)
chr2 (38-94)||(5362435-5362491)
chr2 (48-100)||(21024726-21024778)
[»] chr4 (54 HSPs)
chr4 (42-96)||(43074826-43074880)
chr4 (43-94)||(21871645-21871696)
chr4 (43-94)||(21927506-21927557)
chr4 (38-100)||(53312282-53312344)
chr4 (48-95)||(21957733-21957780)
chr4 (48-94)||(1420537-1420583)
chr4 (38-96)||(14449541-14449599)
chr4 (48-97)||(2016790-2016839)
chr4 (43-95)||(35615315-35615367)
chr4 (38-97)||(25909486-25909545)
chr4 (38-92)||(14060760-14060814)
chr4 (43-100)||(4796299-4796356)
chr4 (38-99)||(20118162-20118223)
chr4 (48-100)||(1420810-1420862)
chr4 (48-100)||(2017054-2017106)
chr4 (43-99)||(2836896-2836952)
chr4 (42-97)||(19909172-19909227)
chr4 (38-97)||(37832953-37833012)
chr4 (38-97)||(43074615-43074674)
chr4 (38-93)||(50769366-50769421)
chr4 (38-93)||(51362539-51362594)
chr4 (48-98)||(4796034-4796084)
chr4 (42-100)||(8070624-8070682)
chr4 (38-96)||(10059955-10060013)
chr4 (48-94)||(14016722-14016768)
chr4 (43-97)||(21957538-21957592)
chr4 (38-100)||(51362796-51362858)
chr4 (39-96)||(3556170-3556227)
chr4 (43-96)||(20112410-20112463)
chr4 (39-96)||(42525965-42526022)
chr4 (43-100)||(44121048-44121105)
chr4 (48-93)||(53925016-53925061)
chr4 (42-98)||(6207436-6207492)
chr4 (49-97)||(21451458-21451506)
chr4 (48-96)||(52463053-52463101)
chr4 (42-97)||(1571398-1571453)
chr4 (38-97)||(12719702-12719761)
chr4 (38-97)||(23759560-23759619)
chr4 (38-93)||(27978695-27978750)
chr4 (45-100)||(54855300-54855355)
chr4 (43-97)||(1186657-1186711)
chr4 (48-98)||(8965777-8965826)
chr4 (48-98)||(11824186-11824236)
chr4 (48-98)||(44356663-44356712)
chr4 (38-96)||(49185571-49185628)
chr4 (43-96)||(2653953-2654006)
chr4 (45-98)||(13306915-13306968)
chr4 (39-100)||(49869675-49869736)
chr4 (43-96)||(50769622-50769675)
chr4 (38-99)||(53924744-53924805)
chr4 (48-96)||(9592396-9592444)
chr4 (46-98)||(13209722-13209774)
chr4 (44-100)||(16292529-16292585)
chr4 (48-100)||(35393935-35393987)
[»] chr1 (32 HSPs)
chr1 (38-97)||(3377500-3377559)
chr1 (48-96)||(14978797-14978845)
chr1 (42-90)||(25085650-25085698)
chr1 (42-100)||(25085395-25085453)
chr1 (38-100)||(45738932-45738994)
chr1 (43-97)||(51250484-51250538)
chr1 (43-96)||(3377772-3377825)
chr1 (38-99)||(27864413-27864474)
chr1 (48-100)||(35544741-35544793)
chr1 (42-93)||(16874511-16874562)
chr1 (38-97)||(50226391-50226450)
chr1 (48-94)||(1096469-1096515)
chr1 (38-92)||(6320562-6320616)
chr1 (48-98)||(12960844-12960894)
chr1 (38-96)||(32295209-32295267)
chr1 (49-83)||(49426257-49426291)
chr1 (38-99)||(41997637-41997698)
chr1 (38-94)||(18632595-18632651)
chr1 (42-94)||(23891890-23891942)
chr1 (38-97)||(17760681-17760740)
chr1 (48-98)||(15659260-15659310)
chr1 (49-99)||(25486479-25486529)
chr1 (48-93)||(12961110-12961155)
chr1 (49-98)||(17692725-17692774)
chr1 (43-96)||(21932048-21932101)
chr1 (48-97)||(39642199-39642248)
chr1 (44-97)||(43600397-43600450)
chr1 (43-95)||(5287835-5287887)
chr1 (48-100)||(7764446-7764498)
chr1 (49-97)||(15911671-15911719)
chr1 (48-100)||(16874769-16874821)
chr1 (48-100)||(23220827-23220879)
[»] chr6 (19 HSPs)
chr6 (38-92)||(20474960-20475014)
chr6 (48-100)||(2203183-2203235)
chr6 (38-100)||(10727450-10727512)
chr6 (38-97)||(30349348-30349407)
chr6 (48-98)||(33399784-33399833)
chr6 (38-98)||(30349612-30349672)
chr6 (50-92)||(17532254-17532296)
chr6 (47-96)||(17248636-17248685)
chr6 (45-100)||(238926-238981)
chr6 (48-95)||(6036925-6036971)
chr6 (42-96)||(266122-266176)
chr6 (43-97)||(4037037-4037091)
chr6 (43-97)||(14168575-14168629)
chr6 (43-97)||(14168978-14169032)
chr6 (44-98)||(26311394-26311448)
chr6 (39-100)||(11108990-11109051)
chr6 (49-97)||(2841079-2841127)
chr6 (43-99)||(2853677-2853733)
chr6 (44-100)||(27119350-27119405)
[»] chr3 (37 HSPs)
chr3 (38-100)||(51315740-51315802)
chr3 (38-100)||(22494549-22494611)
chr3 (50-98)||(44433334-44433382)
chr3 (55-99)||(49787247-49787291)
chr3 (38-93)||(44586042-44586097)
chr3 (38-96)||(38177178-38177236)
chr3 (45-98)||(25154444-25154497)
chr3 (38-95)||(54464163-54464220)
chr3 (48-100)||(86571-86623)
chr3 (42-98)||(578671-578727)
chr3 (48-95)||(1814819-1814866)
chr3 (43-98)||(14349369-14349424)
chr3 (48-98)||(7218421-7218471)
chr3 (38-96)||(33329611-33329669)
chr3 (48-97)||(25902619-25902668)
chr3 (43-100)||(54716472-54716529)
chr3 (48-96)||(20432449-20432497)
chr3 (48-100)||(28944231-28944283)
chr3 (43-103)||(46226948-46227008)
chr3 (44-100)||(50725008-50725064)
chr3 (44-100)||(50787786-50787842)
chr3 (48-99)||(15978956-15979007)
chr3 (43-98)||(28204478-28204533)
chr3 (48-83)||(29512560-29512595)
chr3 (38-97)||(38957844-38957903)
chr3 (48-99)||(48348252-48348303)
chr3 (45-83)||(791582-791620)
chr3 (48-97)||(17773169-17773218)
chr3 (48-97)||(19074470-19074519)
chr3 (48-97)||(20432189-20432238)
chr3 (49-98)||(36687862-36687911)
chr3 (43-96)||(45125095-45125148)
chr3 (49-98)||(46934037-46934086)
chr3 (38-95)||(50802660-50802717)
chr3 (38-95)||(50873160-50873217)
chr3 (38-98)||(3193037-3193097)
chr3 (48-96)||(54719261-54719309)
[»] chr5 (29 HSPs)
chr5 (38-99)||(12406038-12406099)
chr5 (42-97)||(12406300-12406355)
chr5 (42-93)||(40133139-40133190)
chr5 (38-96)||(3333957-3334015)
chr5 (43-93)||(19340767-19340817)
chr5 (38-100)||(27904739-27904801)
chr5 (43-96)||(21066375-21066428)
chr5 (38-94)||(37897973-37898029)
chr5 (48-93)||(8284158-8284203)
chr5 (38-94)||(20630000-20630057)
chr5 (48-97)||(36798442-36798491)
chr5 (46-98)||(24405488-24405540)
chr5 (48-100)||(26562986-26563038)
chr5 (45-93)||(31080480-31080528)
chr5 (38-97)||(36798169-36798228)
chr5 (39-98)||(39049015-39049074)
chr5 (45-96)||(40132904-40132955)
chr5 (38-97)||(40276286-40276345)
chr5 (43-100)||(2974895-2974952)
chr5 (48-97)||(22300600-22300649)
chr5 (38-93)||(3999089-3999144)
chr5 (38-97)||(35166296-35166354)
chr5 (42-96)||(6131795-6131849)
chr5 (38-100)||(20629732-20629794)
chr5 (49-95)||(43098291-43098337)
chr5 (43-96)||(6815500-6815553)
chr5 (40-93)||(20512197-20512250)
chr5 (43-99)||(10331953-10332009)
chr5 (49-93)||(19131765-19131809)
[»] scaffold0515 (1 HSPs)
scaffold0515 (38-98)||(3637-3697)
[»] scaffold0306 (1 HSPs)
scaffold0306 (38-98)||(3637-3697)
[»] chr8 (27 HSPs)
chr8 (42-100)||(32071272-32071329)
chr8 (43-100)||(27545340-27545397)
chr8 (44-96)||(6807428-6807480)
chr8 (38-98)||(28349563-28349623)
chr8 (49-100)||(41487476-41487527)
chr8 (43-93)||(25896993-25897043)
chr8 (38-96)||(36688253-36688311)
chr8 (43-100)||(20853374-20853431)
chr8 (49-97)||(23702401-23702449)
chr8 (41-96)||(9762458-9762513)
chr8 (38-97)||(44269373-44269432)
chr8 (47-100)||(45515929-45515982)
chr8 (38-94)||(26823828-26823884)
chr8 (42-98)||(32498376-32498432)
chr8 (47-99)||(37263600-37263652)
chr8 (43-98)||(31947852-31947907)
chr8 (42-95)||(15181640-15181694)
chr8 (45-99)||(17019700-17019754)
chr8 (45-99)||(17550137-17550191)
chr8 (46-100)||(26919979-26920033)
chr8 (48-98)||(30539257-30539306)
chr8 (43-97)||(35213030-35213084)
chr8 (39-93)||(37939917-37939971)
chr8 (49-99)||(41602878-41602928)
chr8 (38-96)||(45177201-45177259)
chr8 (47-100)||(20699458-20699511)
chr8 (48-97)||(29044811-29044860)
[»] scaffold1458 (1 HSPs)
scaffold1458 (38-98)||(1469-1529)
[»] scaffold0025 (1 HSPs)
scaffold0025 (43-93)||(19602-19652)
[»] scaffold0372 (1 HSPs)
scaffold0372 (49-97)||(123-171)
[»] scaffold0809 (1 HSPs)
scaffold0809 (44-98)||(3019-3073)
[»] scaffold0150 (1 HSPs)
scaffold0150 (43-93)||(9558-9608)
[»] scaffold0328 (1 HSPs)
scaffold0328 (49-93)||(9415-9459)


Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 49 - 289
Target Start/End: Complemental strand, 42256630 - 42256388
Alignment:
Q  49 aaaatcgcaactttggaaaagttagggggct-aaaattgctattaagcctaaacta-atacctagttttaaatagtgtgatggaattttgtctcatgcag 146  Q
    ||||||||||||||| ||||||||||||| | |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42256630 aaaatcgcaactttgaaaaagttaggggggttaaaactgctattaagcctaaactatatacctagttttaaatagtgtgatggaattttgtctcatgcag 42256531  T
Q  147 ttgagcggatcaacaatgtttaatctttctcttctaacatctgatatgtgggcagtggtttttagagttttcatttatcaccagaaggtattaatttccg 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42256530 ttgagcggatcaacaatgtttaatctttctcttctaacatctgatatctgggcagtggtttttagagttttcatttatcaccagaaggtattaatttccg 42256431  T
Q  247 atattcatttgcatgtgacatcgccatagatagctgttgaaaa 289  Q
    | |||||||||||||||||||||||||||||||||||||||||    
T  42256430 aaattcatttgcatgtgacatcgccatagatagctgttgaaaa 42256388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 127 - 275
Target Start/End: Complemental strand, 42261996 - 42261848
Alignment:
Q  127 tggaattttgtctcatgcagttgagcggatcaacaatgtttaatctttctcttctaacatctgatatgtgggcagtggtttttagagttttcatttatca 226  Q
    ||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  42261996 tggaattttgtctcatgcagttcggcggatcagcaatgtttaatctttctcttctaacatctgatatgtgggcagtgctttttagagttttcatttatca 42261897  T
Q  227 ccagaaggtattaatttccgatattcatttgcatgtgacatcgccatag 275  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  42261896 ccagaaggtattaatttccaatattcatttgcacgtgacatcgccatag 42261848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 6792062 - 6792114
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  6792062 caaaatcgcaactttggaaaagttagggggctaaaactgctattaaacctaaa 6792114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 18186708 - 18186763
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaa 93  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  18186708 cttagggggtcaaaatcgtaactttggaaaagttagggggctaaaactgctattaa 18186763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 14247558 - 14247618
Alignment:
Q  39 ttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||||||||| ||||||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  14247558 ttaaggggtcgaaatcgcaactttggaaaagtta-ggggataaaactgctattaagcctaaa 14247618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 28472447 - 28472391
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagc 95  Q
    |||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  28472447 cttagggggtcaaaatcgcaactttggaaaagtta-ggggctaaaactgctattaagc 28472391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 35250177 - 35250116
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaa 99  Q
    ||||||||  |||||||||||||||||||||||||| ||||||||| | |||||||||||||    
T  35250177 cttaagggaccaaaatcgcaactttggaaaagttagagggctaaaactactattaagcctaa 35250116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 41243691 - 41243642
Alignment:
Q  49 aaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  41243691 aaaattgcaactttggaaaagttagggggctaaaactgctattaagccta 41243642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 3318366 - 3318314
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    ||||||||||||||||||||||||| |||||||||| | ||||||||||||||    
T  3318366 caaaatcgcaactttggaaaagttaaggggctaaaactcctattaagcctaaa 3318314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 15348008 - 15347953
Alignment:
Q  42 aggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    ||||||||||||||||||||| | ||||||||||||||||||  ||||||||||||    
T  15348008 aggggtcaaaatcgcaactttaggaaagttagggggctaaaacggctattaagcct 15347953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 20184963 - 20184912
Alignment:
Q  49 aaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    ||||||||||||||||||||||||||| ||||||| || |||||||||||||    
T  20184963 aaaatcgcaactttggaaaagttagggagctaaaactgttattaagcctaaa 20184912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 4049764 - 4049702
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||| |||| |||| ||||||    
T  4049764 cttaaggggccaaaatcgcaactttagaaaagttagtgggctaaaactgctgttaaacctaaa 4049702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 17931992 - 17932042
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    ||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  17931992 caaaatcgcaactttggaaaagtgaggaggctaaaactgctattaagccta 17932042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 47909741 - 47909696
Alignment:
Q  49 aaaatcgcaactttggaaaagttagggggctaaaattgctattaag 94  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||    
T  47909741 aaaatcgcaactttgggaaagttagggggctaaaactgctattaag 47909696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 17876222 - 17876174
Alignment:
Q  47 tcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagc 95  Q
    |||||||||||||||||||||||||||   |||||||||||||||||||    
T  17876222 tcaaaatcgcaactttggaaaagttagaaagctaaaattgctattaagc 17876174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 28786023 - 28786075
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    ||||||| ||||||||||||||||| |||| ||||| ||||||||||||||||    
T  28786023 caaaatcacaactttggaaaagttatggggttaaaactgctattaagcctaaa 28786075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 11373901 - 11373846
Alignment:
Q  42 aggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    ||||||||| |||||||||| | |||||||||||||| |||| |||||||||||||    
T  11373901 aggggtcaagatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 11373846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 15107250 - 15107305
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    |||| |||||||| |||||||||||| |||||||| ||||| ||||||||||||||    
T  15107250 ggggccaaaatcgtaactttggaaaaattaggggggtaaaactgctattaagccta 15107305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 15029114 - 15029058
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttaggg---ggctaaaattgctattaagcc 96  Q
    |||||||||||||||||||||||||||||||||   || ||||| ||||||||||||    
T  15029114 ggggtcaaaatcgcaactttggaaaagttaggggttggttaaaactgctattaagcc 15029058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 21505873 - 21505927
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctatta 92  Q
    |||| |||| |||||||||||||||| |||||||||||| |||||| ||||||||    
T  21505873 cttagggggccaaaatcgcaactttgaaaaagttaggggactaaaactgctatta 21505927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 3292767 - 3292710
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||||||||||||||||| ||| ||||||||||||| |||| |||  |||||||||||    
T  3292767 ggggtcaaaatcgcaactatggcaaagttagggggccaaaagtgcgtttaagcctaaa 3292710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 20505156 - 20505095
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaa 99  Q
    |||| |||| |||| |||||||||||  |||||||||||||||||| ||||||||| |||||    
T  20505156 cttagggggccaaagtcgcaactttgagaaagttagggggctaaaactgctattaaacctaa 20505095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 23826278 - 23826339
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaa 99  Q
    ||||||||| |||||||||||||| |  ||||||||||| | |||| |||||||||||||||    
T  23826278 cttaaggggccaaaatcgcaacttcgtgaaagttaggggacaaaaactgctattaagcctaa 23826339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 36204441 - 36204497
Alignment:
Q  42 aggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    ||||||||||||||||||||| |||||| |||||||| |||| ||| ||||| ||||    
T  36204441 aggggtcaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaaaccta 36204497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 36903533 - 36903581
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||||||||||| ||| ||||||||||||| ||||| ||||||||||||    
T  36903533 caaaatcgcaacattgaaaaagttagggggttaaaactgctattaagcc 36903581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 28350174 - 28350115
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| |||| |||||||| ||||| |  |||||||||||||||||| |||||||||||||    
T  28350174 cttagggggccaaaatcgtaacttcgtgaaagttagggggctaaaactgctattaagcct 28350115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 10097789 - 10097839
Alignment:
Q  46 gtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    ||||||||||||||||||  |||||||   |||||||||||||||||||||    
T  10097789 gtcaaaatcgcaactttgagaaagttaaatggctaaaattgctattaagcc 10097839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 19645061 - 19645119
Alignment:
Q  42 aggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    ||||| |||||||||||||| |  ||||||| ||||| |||||||||||||| ||||||    
T  19645061 aggggccaaaatcgcaacttcgtgaaagttaaggggcgaaaattgctattaaacctaaa 19645119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 29163153 - 29163099
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| ||||||||||||||| |||||| |||||||| |||| ||| |||||||||    
T  29163153 ggggccaaaatcgcaacttttgaaaagatagggggcaaaaagtgcaattaagcct 29163099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 95
Target Start/End: Complemental strand, 36903307 - 36903261
Alignment:
Q  49 aaaatcgcaactttggaaaagttagggggctaaaattgctattaagc 95  Q
    |||||||||||||||||||||| |||| ||||||| | |||||||||    
T  36903307 aaaatcgcaactttggaaaagtaagggagctaaaactactattaagc 36903261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 41446025 - 41445971
Alignment:
Q  44 gggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    ||||||||||||||||||| |||||| ||||| || |||| ||| ||||||||||    
T  41446025 gggtcaaaatcgcaacttttgaaaagatagggagccaaaagtgcaattaagccta 41445971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 11742922 - 11742971
Alignment:
Q  47 tcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||||||||||||||| |||||| |||||||| |||| ||| ||||||||    
T  11742922 tcaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcc 11742971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 93
Target Start/End: Original strand, 29834425 - 29834462
Alignment:
Q  56 caactttggaaaagttagggggctaaaattgctattaa 93  Q
    |||||||||||||||||||||||||||| | |||||||    
T  29834425 caactttggaaaagttagggggctaaaactactattaa 29834462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 19644858 - 19644802
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| |||||||||||||||||||| ||||||||  | |||||||| |||||||||||||    
T  19644858 cttagggggtcaaaatcgcaacttt-gaaaagtt--gaggctaaaactgctattaagcct 19644802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 45717958 - 45717906
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctat 90  Q
    ||||||| | ||||||| ||||||||||||| ||||| |||||||| ||||||    
T  45717958 cttaaggagccaaaatcacaactttggaaaaattaggaggctaaaactgctat 45717906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 45718137 - 45718189
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||| ||||||||| |  ||||||||| ||| |||||||||||||||||||||    
T  45718137 caaattcgcaacttcgtgaaagttaggaggcaaaaattgctattaagcctaaa 45718189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 6592782 - 6592722
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6592782 cttagggggtcaaaatcgcaactttggaaaagttagggggctaaaactgctattaagccta 6592722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 34679145 - 34679096
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34679145 caaaatcgcaactttggaaaagttagggggctaaaactgctattaagcct 34679096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 43028852 - 43028793
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| |||| |||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  43028852 cttagggggccaaaatcgcaactttggagaagttagggggctaaaactgctattaagcct 43028793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 25333557 - 25333497
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    ||||||||  ||||||||||||||||||||||||| |||| |||||||| |||||||||||    
T  25333557 cttaagggaccaaaatcgcaactttggaaaagttaaggggttaaaattgttattaagccta 25333497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 19399431 - 19399490
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    ||||||||  ||||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  19399431 cttaagggaccaaaatcacaactttgaaaaagttagggggctaaaactgctattaagcct 19399490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 4576798 - 4576854
Alignment:
Q  39 ttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||||||| ||||||||||||||||| ||||||||||| |||||| ||||||||||||    
T  4576798 ttaaggggccaaaatcgcaactttgg-aaagttaggggtctaaaactgctattaagcc 4576854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 14943809 - 14943858
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    ||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  14943809 caaaatcacaactttggaaaagttaaggggctaaaactgctattaagcct 14943858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 25375129 - 25375190
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaa 99  Q
    |||| |||| |||||||||||| ||| |||| |||||||||||||| |||||||||||||||    
T  25375129 cttagggggccaaaatcgcaacattgaaaaaattagggggctaaaactgctattaagcctaa 25375190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 31827583 - 31827522
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaa 99  Q
    |||| |||| ||||||| |||||||||||||||||||| | ||||| |||||||||||||||    
T  31827583 cttaggggggcaaaatcacaactttggaaaagttagggagttaaaactgctattaagcctaa 31827522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 44297616 - 44297559
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||| ||||||||||||||| ||||| ||||| |||||||| ||||||||||||||||    
T  44297616 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaa 44297559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 5362233 - 5362173
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    |||| |||| ||||||||||||||||  ||||||||||||| |||||| ||||||||||||    
T  5362233 cttatggggccaaaatcgcaactttgtgaaagttagggggcgaaaattactattaagccta 5362173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 15022886 - 15022838
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    ||||||| ||||||| |||||||||||||||||||| ||||||||||||    
T  15022886 caaaatcacaactttcgaaaagttagggggctaaaactgctattaagcc 15022838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 5470596 - 5470651
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    |||| ||||||||||||||| | |||||||||||||||||| |||||| |||||||    
T  5470596 ggggccaaaatcgcaactttaggaaagttagggggctaaaactgctataaagccta 5470651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 14489272 - 14489213
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    ||||||||| ||||||| ||||||| | |||||||| ||||||||| |||||||||||||    
T  14489272 cttaaggggccaaaatcacaacttttggaaagttagagggctaaaactgctattaagcct 14489213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 19206195 - 19206140
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    |||| ||||||||||||||||  ||| ||||||||| |||||||||||||||||||    
T  19206195 ggggccaaaatcgcaactttgtgaaaattagggggcgaaaattgctattaagccta 19206140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 19399230 - 19399183
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagc 95  Q
    ||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  19399230 caaaatcgcaactttgagaaagttaggaggctaaaattgctattaagc 19399183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 21361938 - 21361880
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    ||||||||| ||||||||||||||||  ||||||| ||||| ||||||||||||||||||    
T  21361938 cttaaggggccaaaatcgcaactttgataaagtta-ggggcaaaaattgctattaagcct 21361880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 31827794 - 31827845
Alignment:
Q  45 ggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    ||||| ||||||||||| | |||||||||||||| |||||||||||||||||    
T  31827794 ggtcataatcgcaacttcgtaaaagttagggggcgaaaattgctattaagcc 31827845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 37803395 - 37803446
Alignment:
Q  45 ggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    ||||||||||||||||| | |||||||||||||| ||||||| |||||||||    
T  37803395 ggtcaaaatcgcaacttcgtaaaagttagggggcgaaaattgttattaagcc 37803446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 14489470 - 14489528
Alignment:
Q  42 aggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    ||||| |||||||||||||| |  ||||||||||||| |||| ||||||||||||||||    
T  14489470 aggggccaaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaagcctaaa 14489528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 39918492 - 39918434
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||| |||| ||||||||||||||||  |||||||||||||||||| | ||||||||||    
T  39918492 cttagggggccaaaatcgcaactttgagaaagttagggggctaaaactactattaagcc 39918434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 10741338 - 10741395
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||||||||| ||||||||| |||||| |||||||| |||| ||| ||||||||||||    
T  10741338 ggggtcaaaaccgcaacttttgaaaagatagggggccaaaagtgcaattaagcctaaa 10741395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 36715560 - 36715609
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||||||||||||||  ||||||||||| ||||||| |||||||||||||    
T  36715560 caaaatcgcaactttaaaaaagttagggagctaaaactgctattaagcct 36715609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 41454566 - 41454509
Alignment:
Q  42 aggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaa 99  Q
    ||||| ||||||||||||||| |||||| |||||||| |||| ||| |||||||||||    
T  41454566 agggggcaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcctaa 41454509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 31025923 - 31025871
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    ||||||||||||||| |||||| |||||||| |||| ||| ||||||||||||    
T  31025923 caaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcctaaa 31025871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 25438 - 25379
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| |||| |||||||| |||||||| ||||||||||||| |||| || ||||||||||    
T  25438 cttagggggccaaaatcgtaactttgggaaagttagggggcaaaaactgttattaagcct 25379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 21358361 - 21358420
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| |||| ||||||| ||||||||  ||||||||||||| |||| |||||||||||||    
T  21358361 cttagggggccaaaatcacaactttgagaaagttagggggcaaaaactgctattaagcct 21358420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 2755210 - 2755264
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| ||||||||||||||| |||||| |||||||| |||| ||| |||||||||    
T  2755210 ggggccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcct 2755264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 32661457 - 32661403
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| ||||||||||||||| |||||| |||||||| |||| ||| |||||||||    
T  32661457 ggggacaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcct 32661403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 41454798 - 41454856
Alignment:
Q  39 ttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||||||| ||||||||||||||| |||||| |||||||| |||  ||| |||||||||    
T  41454798 ttaaggggccaaaatcgcaacttttgaaaagatagggggccaaacgtgcaattaagcct 41454856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 44245228 - 44245286
Alignment:
Q  42 aggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    ||||||||||||||||| ||| |||||| ||||| || |||| ||| ||||||||||||    
T  44245228 aggggtcaaaatcgcaatttttgaaaagatagggagccaaaagtgcaattaagcctaaa 44245286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 12948939 - 12948886
Alignment:
Q  46 gtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaa 99  Q
    ||||||||||||||||   |||| |||||||||||||| ||||||||| |||||    
T  12948939 gtcaaaatcgcaacttcttaaaatttagggggctaaaactgctattaaacctaa 12948886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 24472711 - 24472760
Alignment:
Q  49 aaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    |||||| ||||||||||||| ||||||  |||||| ||||||||||||||    
T  24472711 aaaatcacaactttggaaaaattagggttctaaaactgctattaagccta 24472760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 5362435 - 5362491
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaag 94  Q
    ||||| || |||||||| ||||||| |||||||||||||  ||||| ||||||||||    
T  5362435 cttaaaggatcaaaatcacaactttagaaaagttaggggattaaaactgctattaag 5362491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 21024726 - 21024778
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    ||||||||||||||| |||||| |||||||  |||| ||| ||||||||||||    
T  21024726 caaaatcgcaacttttgaaaagatagggggtcaaaagtgcaattaagcctaaa 21024778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 43074826 - 43074880
Alignment:
Q  42 aggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  43074826 aggggtcaaaatcgcaactttgggaaagttagggggctaaaattgctattaagcc 43074880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 21871645 - 21871696
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaag 94  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21871645 ggggtcaaaatcgcaactttgaaaaagttagggggctaaaattgctattaag 21871696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 21927506 - 21927557
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaag 94  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21927506 ggggtcaaaatcgcaactttgaaaaagttagggggctaaaattgctattaag 21927557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 53312344 - 53312282
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||| |||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  53312344 cttagggggccaaaatcgcaactttgaaaaagttagggggctaaaaatgctattaagcctaaa 53312282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 21957733 - 21957780
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagc 95  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||    
T  21957733 caaaatcgcaactttggaaaagttagggggctaaaactgctattaagc 21957780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 1420583 - 1420537
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaag 94  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  1420583 caaaatcgcaactttggaaaagttagggggctaaaactgctattaag 1420537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 14449541 - 14449599
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||||| || |||||||||||||||||||||||||||||||||||| | ||||||||||    
T  14449541 cttaagaggccaaaatcgcaactttggaaaagttagggggctaaaactactattaagcc 14449599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 2016839 - 2016790
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  2016839 caaaatcgcaactttggaaaagttagggggctaaaactgctatcaagcct 2016790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 35615367 - 35615315
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagc 95  Q
    |||| ||||||||||||||| |||||||||||||||||||| |||||||||||    
T  35615367 ggggccaaaatcgcaactttagaaaagttagggggctaaaactgctattaagc 35615315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 25909545 - 25909486
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| |||| ||||||| |||||||||||||||||||||| ||||| |||||||||||||    
T  25909545 cttagggggccaaaatcacaactttggaaaagttagggggttaaaactgctattaagcct 25909486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 14060814 - 14060760
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctatta 92  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||| ||||||||    
T  14060814 cttagggggtcaaaatcgcaactttgaaaaagttagggggttaaaactgctatta 14060760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 4796299 - 4796356
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||| |||||| |||| |||||| ||||||||||||||||| ||||||||||||||||    
T  4796299 ggggccaaaattgcaattttggataagttagggggctaaaactgctattaagcctaaa 4796356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 20118162 - 20118223
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaa 99  Q
    ||||||||| ||||||| |||||||  |||||||| ||||||||||||||||||||| ||||    
T  20118162 cttaaggggccaaaatcacaactttataaaagttaaggggctaaaattgctattaagtctaa 20118223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 1420810 - 1420862
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||||||| |||||||| ||||||| |||||||||| ||||||||||||||||    
T  1420810 caaaatcgtaactttgggaaagttaaggggctaaaactgctattaagcctaaa 1420862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 2017054 - 2017106
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    ||||||||||||||| | ||||||| |||||||||| ||||||||||||||||    
T  2017054 caaaatcgcaactttaggaaagttatggggctaaaactgctattaagcctaaa 2017106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 2836952 - 2836896
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaa 99  Q
    |||| |||||||||| ||||||||||||||||||| ||||| || ||||||||||||    
T  2836952 ggggccaaaatcgcagctttggaaaagttagggggttaaaactgttattaagcctaa 2836896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 19909227 - 19909172
Alignment:
Q  42 aggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    ||||| ||||||||||||||||  |||||||||||| ||||| |||||||||||||    
T  19909227 aggggccaaaatcgcaactttgagaaagttagggggttaaaactgctattaagcct 19909172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 37832953 - 37833012
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| ||| |||||||||||||||| | ||||||||| |||||||| |||||||||||||    
T  37832953 cttaggggttcaaaatcgcaactttaggaaagttaggaggctaaaactgctattaagcct 37833012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 43074674 - 43074615
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| |||| |||||||||||||| |  ||||||||||||| ||||||||||||||||||    
T  43074674 cttatggggccaaaatcgcaacttcgtgaaagttagggggcgaaaattgctattaagcct 43074615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 50769421 - 50769366
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaa 93  Q
    |||| |||| ||||||||||||||||| |||||||||||| ||||| |||||||||    
T  50769421 cttaggggggcaaaatcgcaactttgggaaagttagggggataaaactgctattaa 50769366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 51362594 - 51362539
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaa 93  Q
    |||| |||| ||||||||||||||| |||||||||||||||||||| | |||||||    
T  51362594 cttagggggccaaaatcgcaactttagaaaagttagggggctaaaactactattaa 51362539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 4796084 - 4796034
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    ||||||||||| |||| |||||||||||| |||||| ||||||||||||||    
T  4796084 caaaatcgcaattttgaaaaagttaggggactaaaaatgctattaagccta 4796034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 8070682 - 8070624
Alignment:
Q  42 aggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    ||||| |||| | ||||||||||||||||||||||| ||||| |||||||||| |||||    
T  8070682 aggggccaaagttgcaactttggaaaagttagggggttaaaactgctattaagtctaaa 8070624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 10059955 - 10060013
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||||||||  ||||||||||||||| |||| ||||||| |||||| ||||||||||||    
T  10059955 cttaaggggcaaaaatcgcaactttgaaaaaattaggggtctaaaactgctattaagcc 10060013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 14016768 - 14016722
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaag 94  Q
    ||||||||||||||||| ||||||||||||||||||  |||||||||    
T  14016768 caaaatcgcaactttgggaaagttagggggctaaaaccgctattaag 14016722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 21957592 - 21957538
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||||||||||||||||||||  |||||||||| ||||||| || ||||||||||    
T  21957592 ggggtcaaaatcgcaactttgagaaagttagggagctaaaactgatattaagcct 21957538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 51362796 - 51362858
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||||||| |||||||| |||||||| |||||||||||| | |||| ||||||||| ||||||    
T  51362796 cttaagggatcaaaatcacaactttgtaaaagttaggggacgaaaactgctattaaacctaaa 51362858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 3556170 - 3556227
Alignment:
Q  39 ttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||||||||||||||| ||||||| |||||| |||||||| |||| ||| ||||||||    
T  3556170 ttaaggggtcaaaatcacaacttttgaaaagatagggggccaaaaatgcaattaagcc 3556227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 20112410 - 20112463
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||| ||||||||||||||||||||||||||  |||||||| || |||||||||    
T  20112410 ggggccaaaatcgcaactttggaaaagttagaaggctaaaactgttattaagcc 20112463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 42526022 - 42525965
Alignment:
Q  39 ttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||||||| |||||| ||||||||  |||| |||||| ||||||||||||||||||||    
T  42526022 ttaaggggccaaaattgcaactttaaaaaaattagggagctaaaattgctattaagcc 42525965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 44121048 - 44121105
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||||||||||||||||||| |||||| |||||||| |||| ||  ||||||||||||    
T  44121048 ggggtcaaaatcgcaacttttgaaaagatagggggccaaaagtgtaattaagcctaaa 44121105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 53925016 - 53925061
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaa 93  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||||||    
T  53925016 caaaatcgcaactttagaaaagttaggaggctaaaattgttattaa 53925061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 6207436 - 6207492
Alignment:
Q  42 aggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    ||||| ||||||| ||||||| | ||| |||||||||||||| ||||||||||||||    
T  6207436 aggggccaaaatcacaactttaggaaaattagggggctaaaactgctattaagccta 6207492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 21451506 - 21451458
Alignment:
Q  49 aaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||||||||||||||  ||||||||| |||||||| |||||||||||||    
T  21451506 aaaatcgcaactttgagaaagttaggaggctaaaactgctattaagcct 21451458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 52463053 - 52463101
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||||||||||||||| |||| |||||||||||||| || |||||||||    
T  52463053 caaaatcgcaactttgaaaaaattagggggctaaaactgttattaagcc 52463101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 1571453 - 1571398
Alignment:
Q  42 aggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    ||||| ||||||||||||||| | |||||||||| | ||||| |||||||||||||    
T  1571453 agggggcaaaatcgcaacttttgtaaagttagggtgttaaaactgctattaagcct 1571398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 12719702 - 12719761
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| |||| ||||||  ||||||||| |||||||||||| ||||| |||||||||||||    
T  12719702 cttagggggccaaaatatcaactttgggaaagttagggggttaaaactgctattaagcct 12719761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 23759619 - 23759560
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    ||||||||| |||||||||||||||   ||||||||||||| |||| | |||||||||||    
T  23759619 cttaaggggccaaaatcgcaactttatgaaagttagggggcgaaaactactattaagcct 23759560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 27978750 - 27978695
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaa 93  Q
    |||| |||||||||||||||||||||  |||||||| ||||| ||| |||||||||    
T  27978750 cttagggggtcaaaatcgcaactttgagaaagttagagggcttaaactgctattaa 27978695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 54855355 - 54855300
Alignment:
Q  45 ggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    ||||||||||||| |||||  ||||||||| || ||||| ||||||||||||||||    
T  54855355 ggtcaaaatcgcagctttgagaaagttaggtggttaaaactgctattaagcctaaa 54855300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 1186711 - 1186657
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| |||||||||||||||  |||||||||||||| |||| ||| |||||||||    
T  1186711 ggggccaaaatcgcaacttttaaaaagttagggggccaaaagtgcaattaagcct 1186657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 8965777 - 8965826
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    |||||||||||||||| |||| ||| |||| ||||||||||||||||||||    
T  8965777 caaaatcgcaactttgaaaaaatta-ggggttaaaattgctattaagccta 8965826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 11824236 - 11824186
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    ||||||| ||||||| | |||||||||||| ||||| ||||||||||||||    
T  11824236 caaaatcacaactttaggaaagttagggggttaaaactgctattaagccta 11824186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 44356663 - 44356712
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    ||||||||||||||||  ||||||| |||||||||| ||||||||||||||    
T  44356663 caaaatcgcaactttgagaaagtta-ggggctaaaactgctattaagccta 44356712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 49185628 - 49185571
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||| |||| |||||||||||||| ||||| ||||||||| ||||| ||||||||||||    
T  49185628 cttagggggccaaaatcgcaacttgggaaa-gttagggggttaaaactgctattaagcc 49185571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 2654006 - 2653953
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||| |||||||||||||| | |||||||||| ||| |||| ||||||||||||    
T  2654006 ggggccaaaatcgcaacttcgtaaaagttaggaggcaaaaactgctattaagcc 2653953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 13306915 - 13306968
Alignment:
Q  45 ggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    |||||||||||||||||| |||||| |||||||| |||| ||| ||||| ||||    
T  13306915 ggtcaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaaaccta 13306968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 49869675 - 49869736
Alignment:
Q  39 ttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||||||| ||||||||||||||| |||||| |||| ||  |||| ||| ||||||||||||    
T  49869675 ttaaggggccaaaatcgcaacttttgaaaagataggaggtcaaaagtgcaattaagcctaaa 49869736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 50769622 - 50769675
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||| |||||||||||||| | |||||||||||||| |||| |||| |||||||    
T  50769622 ggggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgcttttaagcc 50769675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 53924805 - 53924744
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaa 99  Q
    ||||||||||||||||| |||||| |  ||||||||||||| | || | |||||||||||||    
T  53924805 cttaaggggtcaaaatcacaacttcgtgaaagttagggggcgagaactactattaagcctaa 53924744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 9592396 - 9592444
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    ||||||||||||||| |||||| |||||||| |||| ||| ||||||||    
T  9592396 caaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcc 9592444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 13209722 - 13209774
Alignment:
Q  46 gtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    ||||||||||||||||| | |||||||| |||| |||| ||| ||||||||||    
T  13209722 gtcaaaatcgcaacttttggaaagttagagggccaaaagtgcaattaagccta 13209774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 16292529 - 16292585
Alignment:
Q  44 gggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||| ||||||||||||| |  ||||||||||||| ||||||| |||||| ||||||    
T  16292529 gggtaaaaatcgcaacttcgtgaaagttagggggcgaaaattgttattaaacctaaa 16292585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 35393935 - 35393987
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||||||||||||| |  ||||||||||||  |||| ||||||||||||||||    
T  35393935 caaaatcgcaacttcgtgaaagttagggggtgaaaactgctattaagcctaaa 35393987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 3377559 - 3377500
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3377559 cttagggggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagcct 3377500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 14978845 - 14978797
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14978845 caaaatcgcaactttggaaaagttagggggctaaaactgctattaagcc 14978797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 25085650 - 25085698
Alignment:
Q  42 aggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctat 90  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  25085650 aggggccaaaatcacaactttggaaaagttagggggctaaaattgctat 25085698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 25085453 - 25085395
Alignment:
Q  42 aggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||||||||||||||||||||   ||||||||||||| |||| ||||||||||||||||    
T  25085453 aggggtcaaaatcgcaactttatgaaagttagggggcgaaaactgctattaagcctaaa 25085395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 45738994 - 45738932
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||| |||||||||||| ||||||||  |||||||||| | ||||||||||||||||||||||    
T  45738994 cttagggggtcaaaatcacaactttgagaaagttagggagttaaaattgctattaagcctaaa 45738932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 51250538 - 51250484
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| |||||||||||||||| ||||||||||||||||||| || ||||||||||    
T  51250538 ggggccaaaatcgcaactttgaaaaagttagggggctaaaactgttattaagcct 51250484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 3377772 - 3377825
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||| ||||||| ||||||||| |||||||||||||||||| ||||||||||||    
T  3377772 ggggccaaaatcacaactttgggaaagttagggggctaaaactgctattaagcc 3377825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 27864413 - 27864474
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaa 99  Q
    |||| |||| |||||| ||||||||||||||||||||| ||||||| |||| ||||||||||    
T  27864413 cttagggggccaaaattgcaactttggaaaagttagggagctaaaactgctgttaagcctaa 27864474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 35544793 - 35544741
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    ||||||||||||||| |||||| ||||||||||||| ||| ||||||||||||    
T  35544793 caaaatcgcaacttttgaaaagatagggggctaaaagtgcgattaagcctaaa 35544741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 93
Target Start/End: Complemental strand, 16874562 - 16874511
Alignment:
Q  42 aggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaa 93  Q
    |||||||| ||||||||||| | |||||||||||||| ||||||||||||||    
T  16874562 aggggtcataatcgcaacttcgtaaaagttagggggcgaaaattgctattaa 16874511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 50226450 - 50226391
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| |||| |||||||||||||||| ||||||||||||||||||| ||  |||||||||    
T  50226450 cttagggggccaaaatcgcaactttgaaaaagttagggggctaaaactgtaattaagcct 50226391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 1096515 - 1096469
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaag 94  Q
    ||||||||||||||||||||||||| |||||||||| || |||||||    
T  1096515 caaaatcgcaactttggaaaagttaaggggctaaaactgttattaag 1096469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 6320616 - 6320562
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctatta 92  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||| ||| ||||    
T  6320616 cttaaggggccaaaatcgcaactttagaaaagttagagggctaaaactgcaatta 6320562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 12960894 - 12960844
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    |||||||||||||||| ||||||||| ||||||||| || |||||||||||    
T  12960894 caaaatcgcaactttgaaaaagttagcgggctaaaactgttattaagccta 12960844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 32295209 - 32295267
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||| ||||||||||||||||||||| |||||||  |||||||||| | ||||||||||    
T  32295209 cttagggggtcaaaatcgcaactttgaaaaagtttaggggctaaaactcctattaagcc 32295267  T

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Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 49426257 - 49426291
Alignment:
Q  49 aaaatcgcaactttggaaaagttagggggctaaaa 83  Q
    |||||||||||||||||||||||||||||||||||    
T  49426257 aaaatcgcaactttggaaaagttagggggctaaaa 49426291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 41997698 - 41997637
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaa 99  Q
    |||| |||| ||||||||||||||||  ||| ||||||||| |||||||||||||| |||||    
T  41997698 cttatggggccaaaatcgcaactttgtgaaaattagggggcaaaaattgctattaaacctaa 41997637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 18632595 - 18632651
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaag 94  Q
    |||||| || |||||||||||||| | |||||||||||||| |||| ||||||||||    
T  18632595 cttaagaggccaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaag 18632651  T

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Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 23891890 - 23891942
Alignment:
Q  42 aggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaag 94  Q
    |||||||||||||| || |||| |||||||||||| |||||| ||||||||||    
T  23891890 aggggtcaaaatcgtaattttgaaaaagttaggggactaaaactgctattaag 23891942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 17760740 - 17760681
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| |||| ||||||||||||||||   ||||||||||||||||  |||||||||||||    
T  17760740 cttagggggccaaaatcgcaactttgaggaagttagggggctaaagctgctattaagcct 17760681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 15659260 - 15659310
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    ||||||| |||||||||||||||||||||  ||||| ||||||||| ||||    
T  15659260 caaaatcacaactttggaaaagttaggggcttaaaactgctattaaaccta 15659310  T

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Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 25486479 - 25486529
Alignment:
Q  49 aaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaa 99  Q
    ||||||||||||| |  ||||||||||||| |||| |||||||||||||||    
T  25486479 aaaatcgcaacttcgtgaaagttagggggcaaaaactgctattaagcctaa 25486529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 12961110 - 12961155
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaa 93  Q
    |||||||||||||||| |||| ||||| |||||||| |||||||||    
T  12961110 caaaatcgcaactttgaaaaaattaggaggctaaaactgctattaa 12961155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 17692774 - 17692725
Alignment:
Q  49 aaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    |||||| ||||||||  |||||||||||| ||||||||||||||| ||||    
T  17692774 aaaatcacaactttgagaaagttagggggttaaaattgctattaaaccta 17692725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 21932048 - 21932101
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||| ||||||||||||||| |||||| |||||||| |||| ||| ||||||||    
T  21932048 ggggccaaaatcgcaacttttgaaaagatagggggcaaaaagtgcaattaagcc 21932101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 39642248 - 39642199
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||||||||||||| |  ||||||||||||| |||| |||||||||||||    
T  39642248 caaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaagcct 39642199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 43600397 - 43600450
Alignment:
Q  44 gggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||||||||||||||| ||  || |||||||| ||||||| |||||||||||||    
T  43600397 gggtcaaaatcgcaaccttaaaatagttagggtgctaaaactgctattaagcct 43600450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 5287835 - 5287887
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagc 95  Q
    |||| ||||||||||||||||  ||||||| |||| ||||| |||||||||||    
T  5287835 ggggccaaaatcgcaactttgagaaagttaaggggttaaaactgctattaagc 5287887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 7764446 - 7764498
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||||| |||||||| |||||| |||||||| |||| ||| ||||||||||||    
T  7764446 caaaattgcaacttttgaaaagatagggggccaaaagtgcaattaagcctaaa 7764498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 15911719 - 15911671
Alignment:
Q  49 aaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||||||||||||| |||||| |||||||| |||| ||| |||||||||    
T  15911719 aaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcct 15911671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 16874769 - 16874821
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||||| |||||||||  |||||||||||| ||||| ||||||||||| ||||    
T  16874769 caaaattgcaactttgagaaagttagggggttaaaactgctattaagcataaa 16874821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 23220827 - 23220879
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||||||| ||||| | |||||||||||||| |||| |||||| |||||||||    
T  23220827 caaaatcgtaacttcgtaaaagttagggggcgaaaactgctatcaagcctaaa 23220879  T

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Target: chr6 (Bit Score: 47; Significance: 8e-18; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 20474960 - 20475014
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctatta 92  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  20474960 cttaagggatcaaaatcgcaactttgaaaaagttagggggctaaaattgctatta 20475014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 2203235 - 2203183
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  2203235 caaaatcgcaactttgggaaagttagggagctaaaattgctattaagcctaaa 2203183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 10727450 - 10727512
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||| |||| ||||||| |||||||||||||||||||||||||||| |||||||| |||||||    
T  10727450 cttagggggccaaaatcacaactttggaaaagttagggggctaaaactgctattatgcctaaa 10727512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 30349407 - 30349348
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| ||| |||||||||||||||||| |||||||| ||||||||| |||||||||||||    
T  30349407 cttaggggctcaaaatcgcaactttgggaaagttagagggctaaaactgctattaagcct 30349348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 33399833 - 33399784
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  33399833 caaaatcgcaactttggaaaagtta-ggggctaaaactgctattaagccta 33399784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 30349612 - 30349672
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    |||| |||| |||||||||||||||| |||||||||||| | |||| ||||||||||||||    
T  30349612 cttagggggccaaaatcgcaactttgaaaaagttaggggacaaaaactgctattaagccta 30349672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 92
Target Start/End: Complemental strand, 17532296 - 17532254
Alignment:
Q  50 aaatcgcaactttggaaaagttagggggctaaaattgctatta 92  Q
    ||||||||||||||| |||||||||||||||||| ||||||||    
T  17532296 aaatcgcaactttgggaaagttagggggctaaaaatgctatta 17532254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 17248685 - 17248636
Alignment:
Q  47 tcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    ||||||||||||||||  |||||||||| |||||||| ||||||||||||    
T  17248685 tcaaaatcgcaactttaaaaaagttaggaggctaaaactgctattaagcc 17248636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 238981 - 238926
Alignment:
Q  45 ggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    ||||||||||||||||| |  ||| ||||||||| |||| ||||||||||||||||    
T  238981 ggtcaaaatcgcaacttcgtgaaaattagggggcgaaaactgctattaagcctaaa 238926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 6036925 - 6036971
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagc 95  Q
    ||||||||||||||| ||||||||| |||||||||| |||||||||||    
T  6036925 caaaatcgcaactttagaaaagtta-ggggctaaaactgctattaagc 6036971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 266176 - 266122
Alignment:
Q  42 aggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    ||||| |||||| ||| |||||| |||||| ||||||||||| ||||||||||||    
T  266176 aggggccaaaattgcagctttgggaaagtttgggggctaaaactgctattaagcc 266122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 4037091 - 4037037
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| ||||||||||||||| |||||| |||||||| |||| ||| |||||||||    
T  4037091 ggggccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcct 4037037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 14168629 - 14168575
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||||||||||||||||||| |||||| ||| |||| |||| ||| |||||||||    
T  14168629 ggggtcaaaatcgcaacttttgaaaagatagagggccaaaagtgcaattaagcct 14168575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 14168978 - 14169032
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||||||||||||||| ||| |||||| |||||||| |||| ||| |||||||||    
T  14168978 ggggtcaaaatcgcaaattttgaaaagatagggggccaaaagtgcaattaagcct 14169032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 26311448 - 26311394
Alignment:
Q  44 gggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    ||||| |||| ||||||||| |||||||||| |||||||| || |||||||||||    
T  26311448 gggtctaaattgcaactttgtaaaagttaggaggctaaaactgttattaagccta 26311394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 11108990 - 11109051
Alignment:
Q  39 ttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||||||||||||||| ||||||| |||||| || ||||  |||| ||| ||||||||||||    
T  11108990 ttaaggggtcaaaatcacaacttttgaaaagataaggggtcaaaagtgcaattaagcctaaa 11109051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 2841079 - 2841127
Alignment:
Q  49 aaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| ||||| |||| |||||||||||| |||||| |||||||||||||    
T  2841079 aaaagcgcaattttgaaaaagttaggggtctaaaactgctattaagcct 2841127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 2853677 - 2853733
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaa 99  Q
    |||| |||||| |||||||||  ||||||||| || ||||| |||||||||||||||    
T  2853677 ggggccaaaattgcaactttgagaaagttaggaggttaaaactgctattaagcctaa 2853733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 27119350 - 27119405
Alignment:
Q  44 gggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    ||||||||||| ||||||||| ||| ||||||||| |||| || |||||||||||||    
T  27119350 gggtcaaaatcacaactttgggaaacttagggggcaaaaagtg-tattaagcctaaa 27119405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 8e-18; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 51315740 - 51315802
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||| |||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  51315740 cttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcctaaa 51315802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 22494611 - 22494549
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||| ||||||||||||| |||||||||||| |||||||| |||||||||||||||| |||||    
T  22494611 cttagggggtcaaaatcgtaactttggaaaatttagggggttaaaattgctattaagtctaaa 22494549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 44433334 - 44433382
Alignment:
Q  50 aaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  44433334 aaatcgcaactgtggaaaagttagggggctaaaactgctattaagccta 44433382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 49787291 - 49787247
Alignment:
Q  55 gcaactttggaaaagttagggggctaaaattgctattaagcctaa 99  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  49787291 gcaactttggaaaagttagagggctaaaattgctattaagcctaa 49787247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 44586042 - 44586097
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaa 93  Q
    |||| |||| ||||||||||||||||| |||||||||||||||||| |||||||||    
T  44586042 cttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaa 44586097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 38177236 - 38177178
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||| |||| ||||||||||||||||| ||||||| |||||||||||||| ||||||||    
T  38177236 cttagggggccaaaatcgcaactttgggaaagttaaggggctaaaattgccattaagcc 38177178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 25154444 - 25154497
Alignment:
Q  45 ggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    |||||||||| ||||||||| |||||||||||| ||||| ||||||||||||||    
T  25154444 ggtcaaaatcacaactttggtaaagttagggggttaaaactgctattaagccta 25154497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 54464220 - 54464163
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagc 95  Q
    |||||||| ||||||||| |||||| ||||||||||||| |||||| |||||||||||    
T  54464220 cttaagggatcaaaatcgtaactttagaaaagttaggggactaaaactgctattaagc 54464163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 86623 - 86571
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||||| ||||||||  ||||||||||||||||||||||||||||| ||||||    
T  86623 caaaatagcaacttttaaaaagttagggggctaaaattgctattaaacctaaa 86571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 578671 - 578727
Alignment:
Q  42 aggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    ||||| ||||||||||||||||||||||||||| |||||||| || |||||| ||||    
T  578671 aggggccaaaatcgcaactttggaaaagttaggaggctaaaactgatattaaaccta 578727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 1814819 - 1814866
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagc 95  Q
    |||||||| |||||||||||||||||| |||||||| |||||||||||    
T  1814819 caaaatcgaaactttggaaaagttaggaggctaaaactgctattaagc 1814866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 14349369 - 14349424
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    ||||| ||||||||||||| | |||||||||||||| |||| ||||||||||||||    
T  14349369 ggggttaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 14349424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 7218421 - 7218471
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    |||||||||||||||  |||| |||||||||||||||||||||||| ||||    
T  7218421 caaaatcgcaactttaaaaaaattagggggctaaaattgctattaaaccta 7218471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 33329669 - 33329611
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||| ||||||||||||||||||| | ||||||||| |||| |||| ||||||||||||    
T  33329669 cttagggggtcaaaatcgcaacttcgtaaaagttagagggcgaaaactgctattaagcc 33329611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 25902619 - 25902668
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    ||||||||||||||||  |||||||||||||||||| || ||||||||||    
T  25902619 caaaatcgcaactttgagaaagttagggggctaaaactgatattaagcct 25902668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 54716529 - 54716472
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||||||||||| ||||||| |||||| |||||||| |||| ||| ||||||||||||    
T  54716529 ggggtcaaaatcacaacttttgaaaagatagggggccaaaagtgcaattaagcctaaa 54716472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 20432449 - 20432497
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    ||||||| ||||||| |||||||||||||| ||||| ||||||||||||    
T  20432449 caaaatcacaacttttgaaaagttagggggttaaaaatgctattaagcc 20432497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 28944231 - 28944283
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||||||||||||| | |||||||||||| | |||| ||||||||||||||||    
T  28944231 caaaatcgcaacttagtaaaagttaggggacaaaaactgctattaagcctaaa 28944283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 46226948 - 46227008
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaacta 103  Q
    ||||||||||||||||||| |  ||||||||||| | |||| ||||||||| |||||||||    
T  46226948 ggggtcaaaatcgcaacttcgtgaaagttaggggacgaaaactgctattaatcctaaacta 46227008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 50725008 - 50725064
Alignment:
Q  44 gggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    ||||||||||||||| ||| |||||| |||||||| |||| ||| ||||||||||||    
T  50725008 gggtcaaaatcgcaagttttgaaaagatagggggccaaaagtgcaattaagcctaaa 50725064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 50787842 - 50787786
Alignment:
Q  44 gggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    ||||||||||||||| ||| |||||| |||||||| |||| ||| ||||||||||||    
T  50787842 gggtcaaaatcgcaagttttgaaaagatagggggccaaaagtgcaattaagcctaaa 50787786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 15978956 - 15979007
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaa 99  Q
    ||||||||||| ||| ||||||||| |||||||||| | |||||||||||||    
T  15978956 caaaatcgcaattttagaaaagttacggggctaaaactactattaagcctaa 15979007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 28204533 - 28204478
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    ||||||||||||||||||| |  ||||||| ||||| |||| ||||||||||||||    
T  28204533 ggggtcaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaagccta 28204478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 83
Target Start/End: Complemental strand, 29512595 - 29512560
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaa 83  Q
    |||||||||||||||| |||||||||||||||||||    
T  29512595 caaaatcgcaactttgaaaaagttagggggctaaaa 29512560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 38957903 - 38957844
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    ||||| ||| |||||||||||||||  |||| ||||| |||||||| |||||||||||||    
T  38957903 cttaaagggccaaaatcgcaactttaaaaaaattaggaggctaaaactgctattaagcct 38957844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 48348303 - 48348252
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaa 99  Q
    |||||||||||||| | |||||||||||||| |||| |||||||||| ||||    
T  48348303 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagtctaa 48348252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 83
Target Start/End: Original strand, 791582 - 791620
Alignment:
Q  45 ggtcaaaatcgcaactttggaaaagttagggggctaaaa 83  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  791582 ggtcagaatcgcaactttagaaaagttagggggctaaaa 791620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 17773218 - 17773169
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||||||||||||| |  ||||||||||||| |||| |||||||||||||    
T  17773218 caaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 17773169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 19074519 - 19074470
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||||||||||||| |  ||||||||||||| |||| |||||||||||||    
T  19074519 caaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcct 19074470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 20432238 - 20432189
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| ||||||||| | |||||||||||||| |||| |||||||||||||    
T  20432238 caaagtcgcaacttcgtaaaagttagggggcaaaaactgctattaagcct 20432189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 36687862 - 36687911
Alignment:
Q  49 aaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    |||||||||||||||||||| |||  ||||||||| ||||||||| ||||    
T  36687862 aaaatcgcaactttggaaaaattaatgggctaaaactgctattaaaccta 36687911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 45125148 - 45125095
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||| ||||||||||||||| |||||| ||| ||||||||| ||| ||||||||    
T  45125148 ggggccaaaatcgcaacttttgaaaagatagagggctaaaagtgcaattaagcc 45125095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 46934086 - 46934037
Alignment:
Q  49 aaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    |||||||||||||| |||||| |||||||| |||| ||| ||||||||||    
T  46934086 aaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagccta 46934037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 50802717 - 50802660
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagc 95  Q
    |||| |||| ||||||| ||||||||||||||||| | || ||||| |||||||||||    
T  50802717 cttagggggccaaaatcacaactttggaaaagttaagaggttaaaactgctattaagc 50802660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 50873160 - 50873217
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagc 95  Q
    |||| |||| ||||||| ||||||||||||||||| | || ||||| |||||||||||    
T  50873160 cttagggggccaaaatcacaactttggaaaagttaagaggttaaaactgctattaagc 50873217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 3193037 - 3193097
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    |||| |||||||||||||||||||    ||||||||||||  |||| ||||||||||||||    
T  3193037 cttagggggtcaaaatcgcaacttcttgaaagttagggggtgaaaactgctattaagccta 3193097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 54719261 - 54719309
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||||||||||||||| | ||||||||||| ||||| ||| ||||||||    
T  54719261 caaaatcgcaactttgaataagttagggggttaaaactgccattaagcc 54719309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 12406099 - 12406038
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaa 99  Q
    |||| |||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  12406099 cttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcctaa 12406038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 12406300 - 12406355
Alignment:
Q  42 aggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    ||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  12406300 aggggccaaaatctcaactttgaaaaagttagggggctaaaattgctattaagcct 12406355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 40133139 - 40133190
Alignment:
Q  42 aggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaa 93  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  40133139 aggggccaaaatcgcaactttgggaaagttagggggctaaaattgctattaa 40133190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 3333957 - 3334015
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||| |||| |||||||||||||||||||||||||||||||||||| | ||||||||||    
T  3333957 cttagggggccaaaatcgcaactttggaaaagttagggggctaaaactactattaagcc 3334015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 19340817 - 19340767
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaa 93  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  19340817 ggggtcaaaatcgcaattttggaaaagttagggggctaaaactgctattaa 19340767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 27904739 - 27904801
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||| |||| |||||||||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  27904739 cttacggggccaaaatcgcaactttgaaaaagttagagggctaaaactgctattaagcctaaa 27904801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 21066428 - 21066375
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||| |||||||| |||||||||||||||||||||||||||||| |||||||||    
T  21066428 ggggccaaaatcgaaactttggaaaagttagggggctaaaattgttattaagcc 21066375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 37897973 - 37898029
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaag 94  Q
    |||| |||| |||||||||||||||| ||||||||||||||||||| ||||||||||    
T  37897973 cttagggggccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaag 37898029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 8284203 - 8284158
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaa 93  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||    
T  8284203 caaaatcgcaactttggaaaagttatggggttaaaattgctattaa 8284158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 20630000 - 20630057
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttaggg-ggctaaaattgctattaag 94  Q
    ||||||||| ||||||| |||||||||||||||||||| |||||||| ||||||||||    
T  20630000 cttaaggggccaaaatcacaactttggaaaagttagggaggctaaaactgctattaag 20630057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 36798442 - 36798491
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    ||||||||||||||||  |||||||||||||||||| |||||||||||||    
T  36798442 caaaatcgcaactttgagaaagttagggggctaaaactgctattaagcct 36798491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 24405540 - 24405488
Alignment:
Q  46 gtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    |||||||||||||||||| |||||||||||| |||||| ||||||||| ||||    
T  24405540 gtcaaaatcgcaactttgaaaaagttaggggactaaaactgctattaaaccta 24405488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 26563038 - 26562986
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    ||||||| |||||||||||||||||| || |||||| ||||||||||||||||    
T  26563038 caaaatcacaactttggaaaagttagcggactaaaactgctattaagcctaaa 26562986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 31080528 - 31080480
Alignment:
Q  45 ggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaa 93  Q
    ||||||||||||||||||||||||||||| ||||||||| || ||||||    
T  31080528 ggtcaaaatcgcaactttggaaaagttagagggctaaaactgatattaa 31080480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 36798228 - 36798169
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| |||| |||||| |||||||||||||||||| ||| |||||| |||||||||||||    
T  36798228 cttagggggccaaaattgcaactttggaaaagttaagggtctaaaactgctattaagcct 36798169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 98
Target Start/End: Complemental strand, 39049074 - 39049015
Alignment:
Q  39 ttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    |||||||||||||||||||||||| |||||| ||| |||| |||| ||| ||||||||||    
T  39049074 ttaaggggtcaaaatcgcaacttttgaaaagatagagggccaaaactgcaattaagccta 39049015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 96
Target Start/End: Complemental strand, 40132955 - 40132904
Alignment:
Q  45 ggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    ||||||||||||||||||| ||||||||| || |||||| ||||||||||||    
T  40132955 ggtcaaaatcgcaactttgaaaaagttagaggactaaaactgctattaagcc 40132904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 40276286 - 40276345
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| ||||| |||||||||| ||||| |||||||||||| ||||| |||||||||||||    
T  40276286 cttagggggttaaaatcgcaaatttgggaaagttagggggataaaactgctattaagcct 40276345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 2974895 - 2974952
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||| |||||||||||||| |  ||||||||||||| |||| ||||||||||||||||    
T  2974895 ggggccaaaatcgcaacttcgtgaaagttagggggcaaaaactgctattaagcctaaa 2974952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 22300649 - 22300600
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    ||||||||||||||| |||||||||| ||||||||| | |||||||||||    
T  22300649 caaaatcgcaactttagaaaagttagagggctaaaactactattaagcct 22300600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 3999144 - 3999089
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaa 93  Q
    |||| ||||||||||||||||||| |  ||||||||||||| |||| |||||||||    
T  3999144 cttagggggtcaaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaa 3999089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 35166354 - 35166296
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| |||||||||||||||| |||||||||||||   |||||||| |||||||||||||    
T  35166354 cttagggggtcaaaatcgcaattttggaaaagtta-aaggctaaaactgctattaagcct 35166296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 6131795 - 6131849
Alignment:
Q  42 aggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    ||||| ||||||||||||||| | |||||||||  ||||||| ||||||||||||    
T  6131795 aggggccaaaatcgcaactttaggaaagttaggtagctaaaactgctattaagcc 6131849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 100
Target Start/End: Complemental strand, 20629794 - 20629732
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||| ||||| |||||||||||||||  ||||||| ||||| |||| ||||||||| ||||||    
T  20629794 cttagggggttaaaatcgcaactttgtgaaagttaaggggcgaaaactgctattaaacctaaa 20629732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 95
Target Start/End: Original strand, 43098291 - 43098337
Alignment:
Q  49 aaaatcgcaactttggaaaagttagggggctaaaattgctattaagc 95  Q
    ||||||| ||||||| |||||||||||| |||||| |||||||||||    
T  43098291 aaaatcgtaactttgaaaaagttaggggactaaaactgctattaagc 43098337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 6815553 - 6815500
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    ||||| |||||||||||||| |||||| |||||||| |||| ||| ||||||||    
T  6815553 ggggttaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcc 6815500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 20512250 - 20512197
Alignment:
Q  40 taaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaa 93  Q
    ||||||||||||||| | |||||| |||| ||| |||||||||| |||||||||    
T  20512250 taaggggtcaaaatcacgactttgaaaaaattaaggggctaaaactgctattaa 20512197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 10332009 - 10331953
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaa 99  Q
    |||| ||||||||||||||| |||||| |||||||  |||| ||| |||||||||||    
T  10332009 ggggccaaaatcgcaacttttgaaaagatagggggtcaaaagtgcaattaagcctaa 10331953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 93
Target Start/End: Original strand, 19131765 - 19131809
Alignment:
Q  49 aaaatcgcaactttggaaaagttagggggctaaaattgctattaa 93  Q
    |||||||||||||| |||||||||| || |||||| |||||||||    
T  19131765 aaaatcgcaactttagaaaagttagaggactaaaactgctattaa 19131809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 3697 - 3637
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    |||| |||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  3697 cttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagccta 3637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 3697 - 3637
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    |||| |||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  3697 cttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagccta 3637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 32071272 - 32071329
Alignment:
Q  42 aggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    ||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||    
T  32071272 aggggtcaaaatcgcaactttagaaaagtta-ggggctaaaactgctattaagcctaaa 32071329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 27545397 - 27545340
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||||| ||||||||||||||||||||||||  |||||||| ||||||||||||||||    
T  27545397 ggggtcgaaatcgcaactttggaaaagttagacggctaaaactgctattaagcctaaa 27545340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 6807428 - 6807480
Alignment:
Q  44 gggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||||||||| |||||||||| ||||||||||| |||||||||||||||||||    
T  6807428 gggtcaaaattgcaactttgggaaagttaggggactaaaattgctattaagcc 6807480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 28349563 - 28349623
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    |||| |||| ||||||||||||||||| |||||||||||||||||| | ||||||||||||    
T  28349563 cttagggggccaaaatcgcaactttgggaaagttagggggctaaaactactattaagccta 28349623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 100
Target Start/End: Original strand, 41487476 - 41487527
Alignment:
Q  49 aaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||| ||||||    
T  41487476 aaaatcgcaactttggaaaagttagagggctaaaactgctattaaacctaaa 41487527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 25897043 - 25896993
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaa 93  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||||||    
T  25897043 ggggccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaa 25896993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 36688253 - 36688311
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||| |||||||||||| |||||||| ||||||||||||| ||||| ||||||||||||    
T  36688253 cttagggggtcaaaatcacaactttgaaaaagttagggggttaaaactgctattaagcc 36688311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 20853431 - 20853374
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    |||||||||||||||||||    |||||||||||||||||| ||||||||||||||||    
T  20853431 ggggtcaaaatcgcaacttcaagaaagttagggggctaaaactgctattaagcctaaa 20853374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 23702401 - 23702449
Alignment:
Q  49 aaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||||||||||||| | |||||||||||||||||| |||||||||||||    
T  23702401 aaaatcgcaacttttggaaagttagggggctaaaactgctattaagcct 23702449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 9762458 - 9762513
Alignment:
Q  41 aaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||||| |||||||||||||| | |||||||||| ||| |||||||||||||||||    
T  9762458 aaggggccaaaatcgcaacttcgtaaaagttaggtggcgaaaattgctattaagcc 9762513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 44269373 - 44269432
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||| |||||||||||||||||||||  ||| |||||||| ||||||| |||||||||||    
T  44269373 cttagggggtcaaaatcgcaactttgagaaaattagggggttaaaattactattaagcct 44269432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 45515982 - 45515929
Alignment:
Q  47 tcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    ||||||||||||||||| |||| ||| |||||||||| ||| ||||||||||||    
T  45515982 tcaaaatcgcaactttgaaaaaattaaggggctaaaactgcaattaagcctaaa 45515929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 26823884 - 26823828
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaag 94  Q
    |||||||||||||||||| |||||||  |||||||| ||| ||||| ||||||||||    
T  26823884 cttaaggggtcaaaatcgtaactttgagaaagttagagggttaaaactgctattaag 26823828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 32498432 - 32498376
Alignment:
Q  42 aggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    ||||| ||||||||||||||| |||||| |||||||| |||| ||| ||||||||||    
T  32498432 aggggccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagccta 32498376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 37263600 - 37263652
Alignment:
Q  47 tcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaa 99  Q
    |||||||||||||||| | ||||||||| || |||||||| ||||||||||||    
T  37263600 tcaaaatcgcaacttttggaaagttaggaggttaaaattgatattaagcctaa 37263652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 31947907 - 31947852
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    |||| ||||||||||||||| |||||| |||||||| |||| ||| ||||||||||    
T  31947907 ggggccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagccta 31947852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 15181694 - 15181640
Alignment:
Q  42 aggggtcaaaatcgcaactttg-gaaaagttagggggctaaaattgctattaagc 95  Q
    ||||| ||||||| |||||||| ||||||||| |||||||||| |||||||||||    
T  15181694 agggggcaaaatcacaactttgagaaaagttatggggctaaaactgctattaagc 15181640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 17019754 - 17019700
Alignment:
Q  45 ggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaa 99  Q
    |||||||||| ||||||| ||||| |||||||| ||||| || ||||||||||||    
T  17019754 ggtcaaaatcacaactttagaaaaattagggggttaaaactgttattaagcctaa 17019700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 17550191 - 17550137
Alignment:
Q  45 ggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaa 99  Q
    |||||||||| ||||||| ||||| |||||||| ||||| || ||||||||||||    
T  17550191 ggtcaaaatcacaactttagaaaaattagggggttaaaactgttattaagcctaa 17550137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 26919979 - 26920033
Alignment:
Q  46 gtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    ||||||||| ||||||| |||||| |||||||| |||| ||| ||||||||||||    
T  26919979 gtcaaaatcacaacttttgaaaagatagggggccaaaagtgcaattaagcctaaa 26920033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 30539257 - 30539306
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    ||||||||||||||||| |||||||  ||||||||| ||||||||||||||    
T  30539257 caaaatcgcaactttgggaaagtta-agggctaaaactgctattaagccta 30539306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 35213084 - 35213030
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||||||||||||||||||||  |||||||| |||| ||||  ||||||||||||    
T  35213084 ggggtcaaaatcgcaactttgtcaaagttagtgggcgaaaaccgctattaagcct 35213030  T

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Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 37939971 - 37939917
Alignment:
Q  39 ttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaa 93  Q
    |||||||| |||||||||||||||| |||| ||| | |||||||| |||||||||    
T  37939971 ttaaggggccaaaatcgcaactttgaaaaaattaagaggctaaaactgctattaa 37939917  T

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Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 41602878 - 41602928
Alignment:
Q  49 aaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaa 99  Q
    ||||||||||||||   ||| |||||||||||||| |||||||||||||||    
T  41602878 aaaatcgcaactttttgaaacttagggggctaaaactgctattaagcctaa 41602928  T

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Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 45177259 - 45177201
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcc 96  Q
    |||| ||| |||||||||||||||||  ||||||||| |||||||  ||||||||||||    
T  45177259 cttaggggatcaaaatcgcaactttgagaaagttaggaggctaaatctgctattaagcc 45177201  T

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Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 20699458 - 20699511
Alignment:
Q  47 tcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagcctaaa 100  Q
    ||||||| ||||||||  ||||||||||||| ||||| ||||||||| ||||||    
T  20699458 tcaaaattgcaactttaaaaaagttagggggttaaaactgctattaaacctaaa 20699511  T

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Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 29044811 - 29044860
Alignment:
Q  48 caaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||||||| |||||| |  ||||||||||||||||| |||||||||||||    
T  29044811 caaaatcgtaactttagggaagttagggggctaaaactgctattaagcct 29044860  T

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Target: scaffold1458 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1458
Description:

Target: scaffold1458; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 1529 - 1469
Alignment:
Q  38 cttaaggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    |||| |||| ||||||| ||||||||  |||||||||||||||||| ||||||||||||||    
T  1529 cttagggggccaaaatctcaactttgtgaaagttagggggctaaaactgctattaagccta 1469  T

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Target: scaffold0025 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 19602 - 19652
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaa 93  Q
    |||| |||||||||||||||| |||||||||||| |||||| |||||||||    
T  19602 ggggccaaaatcgcaactttgaaaaagttaggggactaaaactgctattaa 19652  T

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Target: scaffold0372 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 171 - 123
Alignment:
Q  49 aaaatcgcaactttggaaaagttagggggctaaaattgctattaagcct 97  Q
    |||||||||||||||  ||||||||| |||||||| |||||||||||||    
T  171 aaaatcgcaactttgagaaagttaggaggctaaaactgctattaagcct 123  T

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Target: scaffold0809 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 3019 - 3073
Alignment:
Q  44 gggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaagccta 98  Q
    ||||||||||||||||||||  ||||||||||  |||||| ||||||||| ||||    
T  3019 gggtcaaaatcgcaactttgagaaagttagggaactaaaactgctattaatccta 3073  T

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Target: scaffold0150 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 9608 - 9558
Alignment:
Q  43 ggggtcaaaatcgcaactttggaaaagttagggggctaaaattgctattaa 93  Q
    |||| ||||||| ||||||||||||||||| |||||||||| | |||||||    
T  9608 ggggccaaaatcacaactttggaaaagttaaggggctaaaactactattaa 9558  T

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Target: scaffold0328 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 9459 - 9415
Alignment:
Q  49 aaaatcgcaactttggaaaagttagggggctaaaattgctattaa 93  Q
    |||||| ||||||||| ||| |||||||||||||| |||||||||    
T  9459 aaaatcacaactttgggaaaattagggggctaaaactgctattaa 9415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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