View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6203_high_38 (Length: 240)
Name: NF6203_high_38
Description: NF6203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6203_high_38 |
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Alignment Details
Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 31641220 - 31640997
Alignment:
| Q |
1 |
caggttttggttttcttgggacaacaactgttcctgagtcgtgggggaactgttagagaccaaaattaccatgggtatatttggccattcaattcatctt |
100 |
Q |
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| T |
31641220 |
caggttttggttttcttgggacaacaactgttcctgagtcgtgggggaactgttagacaccaaaattaccatgggtatatttggccattcaattcatctt |
31641121 |
T |
|
| Q |
101 |
tagcattgtttctcttatataccttcttgtcatggatcatggagtactgtttttgtttttatttagacaaaaatgtcatcaagtacttgtattttaaatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31641120 |
tagcattgtttctcttatataccttcttgtcatggatcatggagtactgtttttgtttttatttagacaaaaatgtcatcaagtacttgtattttaaatt |
31641021 |
T |
|
| Q |
201 |
ttaccccgtttcaatttcatgtat |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
31641020 |
ttaccccgtttcaatttcatgtat |
31640997 |
T |
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