View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6203_low_3 (Length: 679)
Name: NF6203_low_3
Description: NF6203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6203_low_3 |
 |  |
|
Alignment Details
Target: chr3 (Bit Score: 528; Significance: 0; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 528; E-Value: 0
Query Start/End: Original strand, 17 - 671
Target Start/End: Original strand, 45382250 - 45382905
Alignment:
| Q |
17 |
agaaattgaaatcgatacttgggtggatgcagcaggaaagaatggaatgcgaagagattggataatccgagatcgttgtaccaaagagatcataactaaa |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45382250 |
agaaattgaaatcgatacttgggtggatgcagcaggaaagaatggaatgcgaagagattggataatccgagatcgttgtaccaaagagatcataactaaa |
45382349 |
T |
 |
| Q |
117 |
gcaacaaggtgcattatttcatatacttttttatgcatccaaaatatgttatgatttataataccaaataatatgttaataggaaactttgtctttgata |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45382350 |
gcaacaaggtgcattatttcatatacttttttatgcatccaaaatatgttatgatttataataccaaataatatgttaataggaaactttgtctttgata |
45382449 |
T |
 |
| Q |
217 |
cagcacatgggtgataatgaatagagaaacaagaagactatcaaagatacctgaagaagatagaaaagagcttactcctttttaccttcataagattgct |
316 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45382450 |
cagcacatgggtgataatgaatagagaaacaagaagactatcaaagatacctgaagaagttagaaaagagcttactcctttttaccttcataagattgct |
45382549 |
T |
 |
| Q |
317 |
gtagctagtgaagaaagatattgtgaaaagatagacaagctcactgatgacacggctgcgagaatacaatctggattggctgtaagtttatttcatacct |
416 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
45382550 |
gtagctagtgaagaaagagattgtgaaaagatagacaagctcactgatgacactgctgagagaatacaatctggtttggctgtaagtttatttcatacct |
45382649 |
T |
 |
| Q |
417 |
gattaataagtttatttttccactcatttttcattatctatgaagcactgacatgaacaccagagacatgaacaccggactccacactgacactcattcg |
516 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
45382650 |
gatttataagtttatttttccactcatttttcgttatctatgaagcactga---------gagagacatgaacactggacttcacactgacattcattcg |
45382740 |
T |
 |
| Q |
517 |
tcaacatcagtagtaatttaagaaaataacatatttgaatgtaatcacat-----------atgttggtgacagacacagacaaatgtcggacaccggac |
605 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
45382741 |
tcaacatcagtagtaatttaagaaaataacatatttgaatgtaatcacatatgtcggtgacatgttggtgtcagacacagacaaatgtcggacaccggac |
45382840 |
T |
 |
| Q |
606 |
atgccttcgatcagaaatgtctgtgctacaaagttcattatttaccaattagtcacttcctttgct |
671 |
Q |
| |
|
|||||||||||||||| | | |||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
45382841 |
atgccttcgatcagaagtat-tgtgctacaaagttcattatttaccaattagtcaattcctttgct |
45382905 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 515 - 561
Target Start/End: Original strand, 47362558 - 47362604
Alignment:
| Q |
515 |
cgtcaacatcagtagtaatttaagaaaataacatatttgaatgtaat |
561 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||| ||||||||||| |
|
|
| T |
47362558 |
cgtcaacatcagtaataatttaagaaaattacataattgaatgtaat |
47362604 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 45; Significance: 3e-16; HSPs: 12)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 486 - 566
Target Start/End: Original strand, 27661703 - 27661783
Alignment:
| Q |
486 |
gaacaccggactccacactgacactcattcgtcaacatcagtagtaatttaagaaaataacatatttgaatgtaatcacat |
566 |
Q |
| |
|
|||||||| |||| ||||| ||||| |||||||||||| ||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
27661703 |
gaacaccgaactcgacactaacactgattcgtcaacattgatagtaatttaagaaaataatatatttcaatgtaatcacat |
27661783 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 529 - 566
Target Start/End: Complemental strand, 26650274 - 26650237
Alignment:
| Q |
529 |
gtaatttaagaaaataacatatttgaatgtaatcacat |
566 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26650274 |
gtaatttaagaaaataacatatttgaatgtaatcacat |
26650237 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 529 - 566
Target Start/End: Complemental strand, 26756242 - 26756205
Alignment:
| Q |
529 |
gtaatttaagaaaataacatatttgaatgtaatcacat |
566 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26756242 |
gtaatttaagaaaataacatatttgaatgtaatcacat |
26756205 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 530 - 570
Target Start/End: Complemental strand, 12627864 - 12627824
Alignment:
| Q |
530 |
taatttaagaaaataacatatttgaatgtaatcacatatgt |
570 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| |||||| |
|
|
| T |
12627864 |
taatttaagaaaataacatatttcaatgtaatcatatatgt |
12627824 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 526 - 566
Target Start/End: Original strand, 29449688 - 29449728
Alignment:
| Q |
526 |
gtagtaatttaagaaaataacatatttgaatgtaatcacat |
566 |
Q |
| |
|
|||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
29449688 |
gtagtaatttcagaaaataacataattgaatgtaatcacat |
29449728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 591 - 641
Target Start/End: Complemental strand, 8148318 - 8148268
Alignment:
| Q |
591 |
tgtcggacaccggacatgccttcgatcagaaatgtctgtgctacaaagttc |
641 |
Q |
| |
|
||||||||||| ||||||||||| ||| |||||||| |||||||| ||||| |
|
|
| T |
8148318 |
tgtcggacaccagacatgccttccatcggaaatgtcggtgctacatagttc |
8148268 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 585 - 638
Target Start/End: Complemental strand, 20809231 - 20809178
Alignment:
| Q |
585 |
gacaaatgtcggacaccggacatgccttcgatcagaaatgtctgtgctacaaag |
638 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| || |||| |||||||||| |
|
|
| T |
20809231 |
gacacatgtcggacaccggacatgccttcgatccaaagtgtcgatgctacaaag |
20809178 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 566
Target Start/End: Complemental strand, 28783043 - 28783014
Alignment:
| Q |
537 |
agaaaataacatatttgaatgtaatcacat |
566 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
28783043 |
agaaaataacatatttgaatgtaatcacat |
28783014 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 527 - 584
Target Start/End: Original strand, 34057962 - 34058019
Alignment:
| Q |
527 |
tagtaatttaagaaaataacatatttgaatgtaatcacatatgttggtgacagacaca |
584 |
Q |
| |
|
||||||| ||||||||| ||||| |||| ||||||||||| ||| |||| |||||||| |
|
|
| T |
34057962 |
tagtaatataagaaaatgacataattgactgtaatcacatgtgtcggtgtcagacaca |
34058019 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 604 - 640
Target Start/End: Original strand, 29670971 - 29671007
Alignment:
| Q |
604 |
acatgccttcgatcagaaatgtctgtgctacaaagtt |
640 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
29670971 |
acatgccttcgatcagaaatgtcggtggtacaaagtt |
29671007 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 527 - 563
Target Start/End: Original strand, 30537508 - 30537544
Alignment:
| Q |
527 |
tagtaatttaagaaaataacatatttgaatgtaatca |
563 |
Q |
| |
|
||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
30537508 |
tagtaatttaagaaaataacataattgaatgttatca |
30537544 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 590 - 638
Target Start/End: Original strand, 31811989 - 31812037
Alignment:
| Q |
590 |
atgtcggacaccggacatgccttcgatcagaaatgtctgtgctacaaag |
638 |
Q |
| |
|
||||||||||| ||||||||||| ||||||| |||| ||||||||||| |
|
|
| T |
31811989 |
atgtcggacactggacatgcctttgatcagaggtgtcagtgctacaaag |
31812037 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 37; Significance: 0.00000000002; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 526 - 566
Target Start/End: Original strand, 43160491 - 43160531
Alignment:
| Q |
526 |
gtagtaatttaagaaaataacatatttgaatgtaatcacat |
566 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
43160491 |
gtagtaatttaagaaaataacataattgaatgtaatcacat |
43160531 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 528 - 575
Target Start/End: Complemental strand, 10893919 - 10893872
Alignment:
| Q |
528 |
agtaatttaagaaaataacatatttgaatgtaatcacatatgttggtg |
575 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||||||||| |||||||| |
|
|
| T |
10893919 |
agtaatttaagaaaatgacataattgaatgtaatcacatgtgttggtg |
10893872 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 524 - 566
Target Start/End: Original strand, 650524 - 650566
Alignment:
| Q |
524 |
cagtagtaatttaagaaaataacatatttgaatgtaatcacat |
566 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||| |||||||| |
|
|
| T |
650524 |
cagtagtaatttaagaaaatgacataattgaatgcaatcacat |
650566 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 530 - 566
Target Start/End: Original strand, 18750887 - 18750923
Alignment:
| Q |
530 |
taatttaagaaaataacatatttgaatgtaatcacat |
566 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
18750887 |
taatttaagaaaatgacataattgaatgtaatcacat |
18750923 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 36; Significance: 0.00000000006; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 527 - 566
Target Start/End: Original strand, 28136673 - 28136712
Alignment:
| Q |
527 |
tagtaatttaagaaaataacatatttgaatgtaatcacat |
566 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
28136673 |
tagtaatttaagaaaataacatatttcaatgtaatcacat |
28136712 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 529 - 566
Target Start/End: Original strand, 645342 - 645379
Alignment:
| Q |
529 |
gtaatttaagaaaataacatatttgaatgtaatcacat |
566 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
645342 |
gtaatttaagaaaatgacataattgaatgtaatcacat |
645379 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 530 - 575
Target Start/End: Original strand, 11601688 - 11601733
Alignment:
| Q |
530 |
taatttaagaaaataacatatttgaatgtaatcacatatgttggtg |
575 |
Q |
| |
|
|||||||||||| ||| || ||||||||||||||||||||||||| |
|
|
| T |
11601688 |
taatttaagaaactaaattaattgaatgtaatcacatatgttggtg |
11601733 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 590 - 638
Target Start/End: Original strand, 12478334 - 12478382
Alignment:
| Q |
590 |
atgtcggacaccggacatgccttcgatcagaaatgtctgtgctacaaag |
638 |
Q |
| |
|
||||| |||||| |||| |||||| |||||||||||| ||||||||||| |
|
|
| T |
12478334 |
atgtcagacaccagacacgccttccatcagaaatgtcggtgctacaaag |
12478382 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 35; Significance: 0.0000000003; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 591 - 633
Target Start/End: Original strand, 14229600 - 14229642
Alignment:
| Q |
591 |
tgtcggacaccggacatgccttcgatcagaaatgtctgtgcta |
633 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
14229600 |
tgtcggacaccggacatgccttcgatcagaagtgtcagtgcta |
14229642 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 526 - 566
Target Start/End: Original strand, 32691750 - 32691790
Alignment:
| Q |
526 |
gtagtaatttaagaaaataacatatttgaatgtaatcacat |
566 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
32691750 |
gtagtaatttaagaaaatgacataattgaatgtaatcacat |
32691790 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 41686852 - 41686804
Alignment:
| Q |
527 |
tagtaatttaagaaaataacatatttgaatgtaatcacatatgttggtg |
575 |
Q |
| |
|
||||||||||||||||||||||| |||| | ||||||||| |||||||| |
|
|
| T |
41686852 |
tagtaatttaagaaaataacatagttgagtctaatcacatgtgttggtg |
41686804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 527 - 575
Target Start/End: Complemental strand, 31681881 - 31681833
Alignment:
| Q |
527 |
tagtaatttaagaaaataacatatttgaatgtaatcacatatgttggtg |
575 |
Q |
| |
|
||||||||||||||||| ||||| ||||||| |||||||| ||| |||| |
|
|
| T |
31681881 |
tagtaatttaagaaaatgacataattgaatgaaatcacatgtgtcggtg |
31681833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 524 - 620
Target Start/End: Complemental strand, 9957045 - 9956949
Alignment:
| Q |
524 |
cagtagtaatttaagaaaataacatatttgaatgtaatcacatatgttggtgacagacacagacaaatgtcggacaccggacatgccttcgatcaga |
620 |
Q |
| |
|
||||| |||||| | ||||||| |||||||| ||||| |||| ||| ||| | ||||| |||| ||||| ||||||||||||||||| ||||||| |
|
|
| T |
9957045 |
cagtaataatttgacaaaataaattatttgaacgtaatgacatgtgtccgtgccggacaccgacacatgtcagacaccggacatgcctttgatcaga |
9956949 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 31; Significance: 0.00000006; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 516 - 566
Target Start/End: Original strand, 10164460 - 10164510
Alignment:
| Q |
516 |
gtcaacatcagtagtaatttaagaaaataacatatttgaatgtaatcacat |
566 |
Q |
| |
|
||||||| | |||||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
10164460 |
gtcaacaccggtagtaatttaagaaaatggcataattgaatgtaatcacat |
10164510 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 528 - 566
Target Start/End: Original strand, 28890768 - 28890806
Alignment:
| Q |
528 |
agtaatttaagaaaataacatatttgaatgtaatcacat |
566 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
28890768 |
agtaatttaagaaaataacataattgaatgcaatcacat |
28890806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 534 - 570
Target Start/End: Complemental strand, 29388410 - 29388374
Alignment:
| Q |
534 |
ttaagaaaataacatatttgaatgtaatcacatatgt |
570 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
29388410 |
ttaagaaaatgacataattgaatgtaatcacatatgt |
29388374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 526 - 566
Target Start/End: Complemental strand, 45615467 - 45615427
Alignment:
| Q |
526 |
gtagtaatttaagaaaataacatatttgaatgtaatcacat |
566 |
Q |
| |
|
|||||||||||||||||| ||||| ||||| |||||||||| |
|
|
| T |
45615467 |
gtagtaatttaagaaaatgacataattgaacgtaatcacat |
45615427 |
T |
 |
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Target: chr1 (Bit Score: 30; Significance: 0.0000002; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 530 - 575
Target Start/End: Original strand, 264615 - 264660
Alignment:
| Q |
530 |
taatttaagaaaataacatatttgaatgtaatcacatatgttggtg |
575 |
Q |
| |
|
|||||||||||| ||||||| || ||||||||||||| |||||||| |
|
|
| T |
264615 |
taatttaagaaagtaacatacttaaatgtaatcacatgtgttggtg |
264660 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 586 - 626
Target Start/End: Original strand, 27835482 - 27835522
Alignment:
| Q |
586 |
acaaatgtcggacaccggacatgccttcgatcagaaatgtc |
626 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||| |||| |
|
|
| T |
27835482 |
acaaatgtcggacaccagacatgccttcaatcagaagtgtc |
27835522 |
T |
 |
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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 530 - 566
Target Start/End: Complemental strand, 43609866 - 43609830
Alignment:
| Q |
530 |
taatttaagaaaataacatatttgaatgtaatcacat |
566 |
Q |
| |
|
|||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
43609866 |
taatttgagaaaataacataattgaatgtaatcacat |
43609830 |
T |
 |
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