View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6203_low_33 (Length: 258)

Name: NF6203_low_33
Description: NF6203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6203_low_33
NF6203_low_33
[»] chr1 (7 HSPs)
chr1 (1-245)||(32876586-32876829)
chr1 (61-146)||(15840932-15841017)
chr1 (29-136)||(33034633-33034741)
chr1 (61-148)||(36132752-36132839)
chr1 (181-239)||(11800831-11800887)
chr1 (81-146)||(41403038-41403103)
chr1 (192-232)||(26967649-26967689)
[»] chr6 (3 HSPs)
chr6 (23-144)||(34105391-34105510)
chr6 (29-144)||(34090339-34090455)
chr6 (48-146)||(20970412-20970510)
[»] scaffold0620 (1 HSPs)
scaffold0620 (29-144)||(3808-3922)
[»] chr7 (3 HSPs)
chr7 (29-142)||(6718749-6718862)
chr7 (70-141)||(23777664-23777735)
chr7 (73-144)||(46262151-46262222)
[»] chr3 (6 HSPs)
chr3 (72-145)||(24991946-24992019)
chr3 (74-138)||(24099360-24099424)
chr3 (29-136)||(19133732-19133839)
chr3 (76-140)||(24712620-24712684)
chr3 (116-150)||(7170904-7170938)
chr3 (60-144)||(2782088-2782172)
[»] chr5 (3 HSPs)
chr5 (42-142)||(28765603-28765703)
chr5 (74-145)||(12046232-12046303)
chr5 (181-240)||(22876037-22876096)
[»] chr2 (5 HSPs)
chr2 (73-144)||(4162052-4162122)
chr2 (109-143)||(19948013-19948047)
chr2 (79-144)||(3985431-3985496)
chr2 (70-107)||(7874306-7874343)
chr2 (78-146)||(8520378-8520446)
[»] chr4 (4 HSPs)
chr4 (70-140)||(36962644-36962714)
chr4 (72-128)||(26474830-26474886)
chr4 (70-133)||(39041303-39041366)
chr4 (60-146)||(32057089-32057175)
[»] chr8 (3 HSPs)
chr8 (102-147)||(12883565-12883610)
chr8 (70-111)||(17657031-17657072)
chr8 (101-140)||(17819864-17819903)
[»] scaffold0572 (1 HSPs)
scaffold0572 (48-146)||(6262-6360)
[»] scaffold0127 (1 HSPs)
scaffold0127 (48-146)||(31232-31330)


Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 32876586 - 32876829
Alignment:
Q  1 caccaccgctcgttctctgatccgtcaaagaagacacccttacaagcccaaaaatttaggtcaataaagtgactcccgatctcgaatcaaaagtcgtcga 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  32876586 caccaccgctcgttctctgatccgccaaagaagacacccttacaagcccaaaaatttaggtcaagaaagtgactcccgatctcgaatcaaaagtcgtcga 32876685  T
Q  101 cccaccatactccataaacaaatcactaaggcacccctcaactcccagactactacttggaacttggactagtataggtcgaccataccacgtgacttgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  32876686 cccaccatactccataaacaaatcactaaggcacccctcaa-tcccggactactacttggaacttggactagtataggtcgaccataccatgtgacttgt 32876784  T
Q  201 aataccttacttgaccgactagcaagatctcactcaacacaggtt 245  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  32876785 aataccttacttgaccgactagcaagatctcactcaacactggtt 32876829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 15840932 - 15841017
Alignment:
Q  61 tcaataaagtgactcccgatctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcactaaggcacccctcaactccc 146  Q
    |||| ||| |||||||||||||||||||||||||  ||  ||||||| |||| | ||||||||| |||||| |||||||| |||||    
T  15840932 tcaagaaactgactcccgatctcgaatcaaaagtgatcagcccaccagactctagaaacaaatccctaaggaacccctcatctccc 15841017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 33034633 - 33034741
Alignment:
Q  29 agaagacacccttacaagcccaaaaatttaggtcaat-aaagtgactcccgatctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcact 127  Q
    |||||||||| | |||| |||||||| ||| |||||  ||| |||||  ||||||||||||| ||||  ||||||||||| |||||||||  ||||| ||    
T  33034633 agaagacaccataacaaacccaaaaacttaagtcaaagaaactgactttcgatctcgaatcagaagtgatcgacccaccagactccataagaaaatctct 33034732  T
Q  128 aaggcaccc 136  Q
    |||||||||    
T  33034733 aaggcaccc 33034741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 36132752 - 36132839
Alignment:
Q  61 tcaataaagtgactcccgatctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcactaaggcacccctcaactcccag 148  Q
    |||| ||| ||||| |||||||| |||||||||   ||||||||||| |||||| ||| || |||||||| ||||||| |||||||||    
T  36132752 tcaagaaactgacttccgatctcaaatcaaaagcgatcgacccaccaaactccaaaaataattcactaagacaccccttaactcccag 36132839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 11800831 - 11800887
Alignment:
Q  181 gaccataccacgtgacttgtaataccttacttgaccgactagcaagatctcactcaaca 239  Q
    |||||| ||| |||||||||||||| |||||  ||| ||||||||||||||||||||||    
T  11800831 gaccattccatgtgacttgtaatactttact--accaactagcaagatctcactcaaca 11800887  T

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Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 146
Target Start/End: Original strand, 41403038 - 41403103
Alignment:
Q  81 ctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcactaaggcacccctcaactccc 146  Q
    ||||||||||| ||  ||| | ||||| |||| | ||||||||||||||| |||||||||||||||    
T  41403038 ctcgaatcaaatgtgatcggctcaccagactctagaaacaaatcactaagtcacccctcaactccc 41403103  T

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Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 26967649 - 26967689
Alignment:
Q  192 gtgacttgtaataccttacttgaccgactagcaagatctca 232  Q
    |||||||||||||| ||| |||||| |||||||||||||||    
T  26967649 gtgacttgtaatactttagttgaccaactagcaagatctca 26967689  T

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Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 144
Target Start/End: Complemental strand, 34105510 - 34105391
Alignment:
Q  23 cgtcaaagaagacacccttacaagcccaaaaatttaggtcaataaagtgactcccgatctcgaatcaaaagtcgtcgacccaccatactccataaacaaa 122  Q
    ||||| |||| ||||| | |||||||  |||||||  ||||| ||| |||||||||||||||||||||||||  ||| ||||||| |||| | |||||||    
T  34105510 cgtcagagaacacaccataacaagcc--aaaatttgagtcaagaaactgactcccgatctcgaatcaaaagtgatcggcccaccaaactctagaaacaaa 34105413  T
Q  123 tcactaaggcacccctcaactc 144  Q
    |||||||||||||| |||||||    
T  34105412 tcactaaggcacccttcaactc 34105391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 34090455 - 34090339
Alignment:
Q  29 agaagacacccttacaagcccaaaaatttaggtcaataaagtgactcccgatctcgaatcaaaagtcgtcgacccaccatactc--cataaacaaatcac 126  Q
    |||||||||| | |||| |||||||||||  ||| | ||| ||||||||||||||||||||||| |  ||||||||||| ||||   | ||| |||||||    
T  34090455 agaagacaccataacaa-cccaaaaatttgagtctagaaactgactcccgatctcgaatcaaaattgatcgacccaccagactctaaaaaaaaaaatcac 34090357  T
Q  127 taaggcacccctcaactc 144  Q
    | |||||||| |||||||    
T  34090356 tgaggcacccttcaactc 34090339  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 146
Target Start/End: Original strand, 20970412 - 20970510
Alignment:
Q  48 ccaaaaatttaggtcaataaagtgactcccgatctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcactaaggcacccctcaactccc 146  Q
    ||||||| ||| ||||| ||| |||||  ||  ||||||||||| ||  ||| | ||||| |||| | ||||||||||||||| |||||||||||||||    
T  20970412 ccaaaaacttaagtcaagaaactgactttcgtcctcgaatcaaatgtgatcggctcaccagactctagaaacaaatcactaagtcacccctcaactccc 20970510  T

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Target: scaffold0620 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 3922 - 3808
Alignment:
Q  29 agaagacacccttacaagcccaaaaatttaggtcaataaagtgactcccgatctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcacta 128  Q
    |||||||||| | |||| |||||||||||  ||||| ||| ||||||||||||||||||||||| |  ||| ||||||| |||| | ||||||||||||     
T  3922 agaagacaccataacaa-cccaaaaatttgagtcaagaaactgactcccgatctcgaatcaaaattgatcggcccaccagactctaaaaacaaatcactg 3824  T
Q  129 aggcacccctcaactc 144  Q
    |||||||  |||||||    
T  3823 aggcaccgttcaactc 3808  T

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Target: chr7 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 6718862 - 6718749
Alignment:
Q  29 agaagacacccttacaagcccaaaaatttaggtcaataaagtgactcccgatctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcacta 128  Q
    |||||||||| | ||||||||||| ||||  ||||| ||| |||||||  |||||||||||||| |  |||| |||||  ||||||||||||||||| |     
T  6718862 agaagacaccataacaagcccaaatatttgagtcaagaaactgactcctcatctcgaatcaaaattgatcgatccaccggactccataaacaaatcattg 6718763  T
Q  129 aggcacccctcaac 142  Q
    ||| ||||||||||    
T  6718762 aggtacccctcaac 6718749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 141
Target Start/End: Original strand, 23777664 - 23777735
Alignment:
Q  70 tgactcccgatctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcactaaggcacccctcaa 141  Q
    ||||| ||||||||||| ||||||   |||||| |||| ||| ||||||||||| |||||||||||||||||    
T  23777664 tgacttccgatctcgaagcaaaagcgatcgaccaaccaaacttcataaacaaataactaaggcacccctcaa 23777735  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 144
Target Start/End: Original strand, 46262151 - 46262222
Alignment:
Q  73 ctcccgatctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcactaaggcacccctcaactc 144  Q
    ||||||||||||||||||||||  ||| ||||||| |||||  | || |||||  |||||||||||||||||    
T  46262151 ctcccgatctcgaatcaaaagtgatcggcccaccagactcccaacaccaatcaaaaaggcacccctcaactc 46262222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 145
Target Start/End: Original strand, 24991946 - 24992019
Alignment:
Q  72 actcccgatctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcactaaggcacccctcaactcc 145  Q
    |||||| |||||||||||||||  |||| ||||||||| |||| |||||||||||||||| ||| |||||||||    
T  24991946 actccctatctcgaatcaaaagcggtcggcccaccataatccaaaaacaaatcactaaggtacctctcaactcc 24992019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 24099360 - 24099424
Alignment:
Q  74 tcccgatctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcactaaggcacccct 138  Q
    ||||||| |||||||||||||  ||| ||||||| |||| |||||||||||| ||||||||||||    
T  24099360 tcccgatatcgaatcaaaagtgatcggcccaccagactctataaacaaatcattaaggcacccct 24099424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 19133732 - 19133839
Alignment:
Q  29 agaagacacccttacaagcccaaaaatttaggtcaataaagtgactcccgatctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcacta 128  Q
    |||||||||| | ||||||| ||||||||  | ||||||| ||||| || | ||||||||||||||  || |||||||| | |  | |||||||||||||    
T  19133732 agaagacaccgtaacaagccaaaaaatttgagccaataaactgacttccaaactcgaatcaaaagtgatctacccaccaaatttgagaaacaaatcacta 19133831  T
Q  129 aggcaccc 136  Q
    ||||||||    
T  19133832 aggcaccc 19133839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 24712684 - 24712620
Alignment:
Q  76 ccgatctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcactaaggcacccctca 140  Q
    |||||||||||| |||| |   || |||||||||||||| |||||||||| ||||||||||||||    
T  24712684 ccgatctcgaataaaaaatgaccggcccaccatactccagaaacaaatcagtaaggcacccctca 24712620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 150
Target Start/End: Original strand, 7170904 - 7170938
Alignment:
Q  116 aaacaaatcactaaggcacccctcaactcccagac 150  Q
    |||||||||||||||||||||||||||||| ||||    
T  7170904 aaacaaatcactaaggcacccctcaactcctagac 7170938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 144
Target Start/End: Original strand, 2782088 - 2782172
Alignment:
Q  60 gtcaataaagtgactcccgatctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcactaaggcacccctcaactc 144  Q
    ||||| ||| || ||||||||||  ||||||||||  ||| ||||||| ||||   | |||||||| ||||||||||||||||||    
T  2782088 gtcaaaaaactggctcccgatctaaaatcaaaagtgatcgtcccaccagactctcgacacaaatcattaaggcacccctcaactc 2782172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 142
Target Start/End: Original strand, 28765603 - 28765703
Alignment:
Q  42 acaagcccaaaaatttaggtcaataaagtgactcccgatctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcactaaggcacccctcaa 141  Q
    ||||||||||||| ||| ||||| ||| |||||| ||||||||||||||||||  || | |||||| | || | ||| |||||| || ||||||||||||    
T  28765603 acaagcccaaaaacttaagtcaagaaactgactctcgatctcgaatcaaaagtgatcaatccaccagaatctagaaaaaaatcattagggcacccctcaa 28765702  T
Q  142 c 142  Q
    |    
T  28765703 c 28765703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 145
Target Start/End: Complemental strand, 12046303 - 12046232
Alignment:
Q  74 tcccgatctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcactaaggcacccctcaactcc 145  Q
    |||||||||||||||||||||  ||| ||||||| ||| |  || |||||||||| ||||||||| ||||||    
T  12046303 tcccgatctcgaatcaaaagtgatcggcccaccaaacttccgaatcaaatcactatggcaccccttaactcc 12046232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 22876037 - 22876096
Alignment:
Q  181 gaccataccacgtgacttgtaataccttacttgaccgactagcaagatctcactcaacac 240  Q
    |||||||||| |||||||||||||  | ||||||||||| | |||||||||||| |||||    
T  22876037 gaccataccatgtgacttgtaatagttgacttgaccgaccaacaagatctcacttaacac 22876096  T

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Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 144
Target Start/End: Original strand, 4162052 - 4162122
Alignment:
Q  73 ctcccgatctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcactaaggcacccctcaactc 144  Q
    ||||||||||||||||||||||  ||| ||||||| |||||  | |||||||||| ||||||||||||||||    
T  4162052 ctcccgatctcgaatcaaaagtgatcggcccaccagactcccaacacaaatcact-aggcacccctcaactc 4162122  T

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Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 143
Target Start/End: Original strand, 19948013 - 19948047
Alignment:
Q  109 actccataaacaaatcactaaggcacccctcaact 143  Q
    |||||| ||||||||||||||||||||||||||||    
T  19948013 actccagaaacaaatcactaaggcacccctcaact 19948047  T

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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 3985496 - 3985431
Alignment:
Q  79 atctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcactaaggcacccctcaactc 144  Q
    ||||| || |||||||  ||| |||| || ||||||||| |||||||||||||||| |||||||||    
T  3985496 atctcaaagcaaaagtgatcgccccatcaaactccataagcaaatcactaaggcactcctcaactc 3985431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 70 - 107
Target Start/End: Complemental strand, 7874343 - 7874306
Alignment:
Q  70 tgactcccgatctcgaatcaaaagtcgtcgacccacca 107  Q
    |||||||||||||||||||||||||  |||||||||||    
T  7874343 tgactcccgatctcgaatcaaaagtgatcgacccacca 7874306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 8520446 - 8520378
Alignment:
Q  78 gatctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcactaaggcacccctcaactccc 146  Q
    |||||||||||||||||  | |  ||| || |||| | ||||||||||||||||||||||||| |||||    
T  8520446 gatctcgaatcaaaagtgattggtccatcagactctagaaacaaatcactaaggcacccctcagctccc 8520378  T

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Target: chr4 (Bit Score: 35; Significance: 0.00000000009; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 36962644 - 36962714
Alignment:
Q  70 tgactcccgatctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcactaaggcacccctca 140  Q
    ||||||| |||||||||||||||||  ||| ||||||| |||||| || ||||||| ||||| ||||||||    
T  36962644 tgactcctgatctcgaatcaaaagtaatcggcccaccagactccaaaaccaaatcagtaaggtacccctca 36962714  T

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Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 128
Target Start/End: Complemental strand, 26474886 - 26474830
Alignment:
Q  72 actcccgatctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcacta 128  Q
    |||| ||||||||||||||||||  ||| ||||||| |||||| |||||||||||||    
T  26474886 actctcgatctcgaatcaaaagtgatcggcccaccaaactccaaaaacaaatcacta 26474830  T

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Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 39041303 - 39041366
Alignment:
Q  70 tgactcccgatctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcactaaggca 133  Q
    ||||||| |||||||||||||||||  ||| ||||||| ||||  ||||||||||| |||||||    
T  39041303 tgactcctgatctcgaatcaaaagtgatcggcccaccagactctgtaaacaaatcattaaggca 39041366  T

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Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 146
Target Start/End: Complemental strand, 32057175 - 32057089
Alignment:
Q  60 gtcaataaagtgactcccgatctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcactaaggcacccctcaactccc 146  Q
    ||||| ||| ||||| |||||||| ||||||||||  ||| || || | ||| ||||||||||||| ||||||| |||| |||||||    
T  32057175 gtcaagaaactgacttccgatctcaaatcaaaagtgatcgtccaactaaacttcataaacaaatcattaaggcaacccttaactccc 32057089  T

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Target: chr8 (Bit Score: 34; Significance: 0.0000000004; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 12883610 - 12883565
Alignment:
Q  102 ccaccatactccataaacaaatcactaaggcacccctcaactccca 147  Q
    |||||| ||||||||||||||| | |||||||||||||||||||||    
T  12883610 ccaccagactccataaacaaattattaaggcacccctcaactccca 12883565  T

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Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 17657031 - 17657072
Alignment:
Q  70 tgactcccgatctcgaatcaaaagtcgtcgacccaccatact 111  Q
    |||||||||||||||||||||||||  |||||||||||||||    
T  17657031 tgactcccgatctcgaatcaaaagtgatcgacccaccatact 17657072  T

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Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 140
Target Start/End: Original strand, 17819864 - 17819903
Alignment:
Q  101 cccaccatactccataaacaaatcactaaggcacccctca 140  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  17819864 cccaccagactccataaacaaatcagtaaggcacccctca 17819903  T

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Target: scaffold0572 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 146
Target Start/End: Original strand, 6262 - 6360
Alignment:
Q  48 ccaaaaatttaggtcaataaagtgactcccgatctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcactaaggcacccctcaactccc 146  Q
    ||||||| ||| ||||| ||| |||||  ||  ||||||||||| ||  ||| | ||||| |||| | ||||||||||||||| |||||||||||||||    
T  6262 ccaaaaacttaagtcaagaaactgactttcgtcctcgaatcaaatgtgatcggctcaccagactctagaaacaaatcactaagtcacccctcaactccc 6360  T

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Target: scaffold0127 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 146
Target Start/End: Complemental strand, 31330 - 31232
Alignment:
Q  48 ccaaaaatttaggtcaataaagtgactcccgatctcgaatcaaaagtcgtcgacccaccatactccataaacaaatcactaaggcacccctcaactccc 146  Q
    ||||||| ||| ||||| ||| |||||  ||  ||||||||||| ||  ||| | ||||| |||| | ||||||||||||||| |||||||||||||||    
T  31330 ccaaaaacttaagtcaagaaactgactttcgtcctcgaatcaaatgtgatcggctcaccagactctagaaacaaatcactaagtcacccctcaactccc 31232  T

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