View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6204_low_3 (Length: 330)

Name: NF6204_low_3
Description: NF6204
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6204_low_3
NF6204_low_3
[»] chr6 (35 HSPs)
chr6 (11-312)||(3765634-3765936)
chr6 (80-289)||(801295-801502)
chr6 (80-289)||(35058605-35058814)
chr6 (80-289)||(29108270-29108478)
chr6 (80-231)||(27640310-27640459)
chr6 (80-231)||(6205614-6205763)
chr6 (80-231)||(11692581-11692730)
chr6 (80-289)||(29066683-29066891)
chr6 (80-289)||(29075696-29075904)
chr6 (80-289)||(29110668-29110876)
chr6 (88-231)||(24021027-24021168)
chr6 (88-227)||(2192535-2192672)
chr6 (80-232)||(13402663-13402816)
chr6 (80-234)||(32027552-32027707)
chr6 (80-160)||(32037686-32037766)
chr6 (80-234)||(30257503-30257658)
chr6 (83-160)||(34802895-34802972)
chr6 (80-234)||(14115167-14115318)
chr6 (80-160)||(12396906-12396986)
chr6 (112-159)||(35021237-35021284)
chr6 (106-225)||(34134807-34134925)
chr6 (80-134)||(22305926-22305980)
chr6 (80-208)||(17465287-17465414)
chr6 (11-46)||(29066547-29066582)
chr6 (11-46)||(29075560-29075595)
chr6 (176-282)||(801606-801710)
chr6 (171-225)||(14123099-14123153)
chr6 (171-289)||(29066988-29067104)
chr6 (171-289)||(29108575-29108691)
chr6 (11-46)||(34803076-34803111)
chr6 (177-231)||(12397334-12397386)
chr6 (176-229)||(13403309-13403362)
chr6 (185-234)||(35021161-35021208)
chr6 (171-223)||(35058392-35058444)
chr6 (11-46)||(29110531-29110567)
[»] chr3 (107 HSPs)
chr3 (80-289)||(13895740-13895949)
chr3 (80-289)||(24702142-24702351)
chr3 (80-289)||(19453099-19453308)
chr3 (80-289)||(34693160-34693369)
chr3 (80-289)||(44927603-44927812)
chr3 (80-289)||(42383191-42383400)
chr3 (80-289)||(48087422-48087631)
chr3 (80-289)||(39416817-39417027)
chr3 (80-289)||(25576462-25576671)
chr3 (80-289)||(42949890-42950099)
chr3 (80-289)||(44835357-44835566)
chr3 (80-289)||(47065827-47066036)
chr3 (80-250)||(53826605-53826775)
chr3 (82-231)||(2268424-2268571)
chr3 (80-289)||(49218607-49218815)
chr3 (82-231)||(50997530-50997677)
chr3 (80-231)||(4004017-4004166)
chr3 (80-231)||(2646806-2646955)
chr3 (80-231)||(34049867-34050016)
chr3 (80-231)||(49139984-49140133)
chr3 (80-199)||(51695566-51695685)
chr3 (80-231)||(54390582-54390731)
chr3 (82-231)||(36135149-36135296)
chr3 (80-231)||(3494959-3495108)
chr3 (80-231)||(46403143-46403292)
chr3 (84-199)||(49610633-49610748)
chr3 (80-289)||(43477197-43477405)
chr3 (80-198)||(42382411-42382529)
chr3 (80-160)||(30192678-30192758)
chr3 (80-160)||(55206883-55206963)
chr3 (83-234)||(51013202-51013354)
chr3 (80-210)||(774288-774417)
chr3 (80-160)||(2428627-2428707)
chr3 (80-160)||(34472075-34472155)
chr3 (80-160)||(41578046-41578126)
chr3 (80-160)||(46414333-46414413)
chr3 (80-151)||(46346620-46346691)
chr3 (80-158)||(36721390-36721468)
chr3 (83-160)||(7246237-7246314)
chr3 (80-160)||(10053274-10053353)
chr3 (80-160)||(37281592-37281672)
chr3 (80-160)||(45100464-45100544)
chr3 (80-160)||(51015417-51015497)
chr3 (102-249)||(33449065-33449208)
chr3 (82-232)||(6754346-6754495)
chr3 (83-160)||(52569408-52569485)
chr3 (80-160)||(34647266-34647346)
chr3 (80-160)||(47759890-47759970)
chr3 (80-235)||(18440885-18441038)
chr3 (80-235)||(19485959-19486112)
chr3 (80-160)||(14631585-14631665)
chr3 (80-160)||(42323388-42323468)
chr3 (80-152)||(43570050-43570122)
chr3 (80-160)||(50458690-50458770)
chr3 (80-231)||(6464274-6464424)
chr3 (80-289)||(8633236-8633438)
chr3 (80-160)||(41804042-41804122)
chr3 (82-160)||(49273541-49273619)
chr3 (80-289)||(7954344-7954552)
chr3 (171-289)||(11378634-11378751)
chr3 (187-250)||(11378846-11378909)
chr3 (171-289)||(44835144-44835260)
chr3 (82-234)||(20375809-20375959)
chr3 (171-289)||(13895527-13895643)
chr3 (171-289)||(24701929-24702045)
chr3 (171-289)||(34692947-34693063)
chr3 (171-289)||(44927909-44928025)
chr3 (80-166)||(27187088-27187174)
chr3 (105-225)||(25887543-25887665)
chr3 (177-234)||(42322986-42323041)
chr3 (11-46)||(51695786-51695821)
chr3 (176-234)||(34646811-34646868)
chr3 (176-289)||(37281898-37282010)
chr3 (177-239)||(43570478-43570538)
chr3 (258-291)||(37281769-37281802)
chr3 (177-234)||(45100071-45100126)
chr3 (177-234)||(46346208-46346263)
chr3 (11-46)||(14631449-14631484)
chr3 (171-289)||(25576248-25576365)
chr3 (11-46)||(30192542-30192577)
chr3 (11-46)||(42328296-42328331)
chr3 (11-46)||(43477061-43477096)
chr3 (11-46)||(46414514-46414549)
chr3 (11-46)||(49610493-49610528)
chr3 (11-46)||(51013458-51013493)
chr3 (12-46)||(13896050-13896084)
chr3 (176-234)||(37282071-37282127)
chr3 (171-289)||(42383497-42383613)
chr3 (177-234)||(46413917-46413972)
chr3 (12-46)||(49218916-49218950)
chr3 (12-46)||(49273404-49273438)
chr3 (177-234)||(51015845-51015900)
chr3 (177-234)||(2429055-2429110)
chr3 (180-224)||(6464012-6464057)
chr3 (177-234)||(10052982-10053037)
chr3 (13-46)||(11378924-11378957)
chr3 (13-46)||(34693470-34693503)
chr3 (13-46)||(44927469-44927502)
chr3 (177-234)||(52569005-52569060)
chr3 (176-224)||(15637226-15637273)
chr3 (14-46)||(24702451-24702483)
chr3 (14-46)||(34472256-34472288)
chr3 (176-231)||(34646929-34646984)
chr3 (14-46)||(36721569-36721601)
chr3 (176-231)||(42322817-42322872)
chr3 (14-46)||(45100645-45100677)
chr3 (14-46)||(51015284-51015316)
[»] chr4 (83 HSPs)
chr4 (80-289)||(49064105-49064315)
chr4 (80-289)||(21711656-21711865)
chr4 (80-289)||(33163416-33163625)
chr4 (80-289)||(51428064-51428273)
chr4 (80-291)||(37866533-37866744)
chr4 (80-289)||(25762724-25762933)
chr4 (80-289)||(27759453-27759662)
chr4 (80-232)||(1226285-1226437)
chr4 (80-232)||(14330623-14330775)
chr4 (80-289)||(51027639-51027848)
chr4 (80-289)||(46816396-46816604)
chr4 (80-289)||(45939651-45939861)
chr4 (80-256)||(242321-242497)
chr4 (80-287)||(31824503-31824710)
chr4 (80-231)||(21017109-21017258)
chr4 (80-237)||(20901592-20901749)
chr4 (80-231)||(40353705-40353854)
chr4 (80-231)||(55796869-55797018)
chr4 (80-289)||(1042875-1043083)
chr4 (80-289)||(39589055-39589263)
chr4 (80-232)||(32937833-32937983)
chr4 (80-231)||(6177247-6177396)
chr4 (80-231)||(41794494-41794643)
chr4 (80-231)||(56139036-56139185)
chr4 (80-289)||(9489804-9490012)
chr4 (80-289)||(28082364-28082571)
chr4 (80-231)||(49094871-49095020)
chr4 (80-197)||(20778833-20778950)
chr4 (80-234)||(21169577-21169732)
chr4 (80-232)||(43889427-43889580)
chr4 (80-234)||(47657281-47657436)
chr4 (80-234)||(957381-957536)
chr4 (80-234)||(49423683-49423839)
chr4 (80-160)||(22437037-22437117)
chr4 (80-160)||(34529797-34529877)
chr4 (80-231)||(17211392-17211542)
chr4 (80-234)||(18412721-18412873)
chr4 (80-163)||(6282321-6282404)
chr4 (80-224)||(24606878-24607020)
chr4 (80-234)||(36776445-36776600)
chr4 (80-234)||(49791862-49792017)
chr4 (80-231)||(49817573-49817725)
chr4 (80-160)||(42886392-42886472)
chr4 (86-234)||(44560106-44560255)
chr4 (80-159)||(34153288-34153367)
chr4 (80-225)||(31324300-31324444)
chr4 (80-231)||(3393430-3393577)
chr4 (80-160)||(26591686-26591766)
chr4 (80-160)||(4785423-4785503)
chr4 (171-289)||(37866839-37866955)
chr4 (80-234)||(2773135-2773290)
chr4 (171-282)||(25763037-25763147)
chr4 (171-289)||(39589360-39589476)
chr4 (102-208)||(13850897-13851002)
chr4 (102-208)||(13866411-13866516)
chr4 (106-203)||(17292114-17292210)
chr4 (80-232)||(49817130-49817278)
chr4 (171-289)||(1043180-1043296)
chr4 (171-289)||(27759759-27759876)
chr4 (177-239)||(2773563-2773623)
chr4 (172-289)||(20901335-20901451)
chr4 (177-234)||(49791534-49791589)
chr4 (80-200)||(10312398-10312517)
chr4 (80-128)||(11288421-11288469)
chr4 (176-231)||(43888922-43888977)
chr4 (11-46)||(242598-242633)
chr4 (11-46)||(4785604-4785639)
chr4 (11-46)||(22436901-22436936)
chr4 (11-46)||(34153468-34153503)
chr4 (11-46)||(34529978-34530013)
chr4 (11-46)||(43889681-43889716)
chr4 (11-46)||(49792118-49792153)
chr4 (11-46)||(51428374-51428409)
chr4 (12-46)||(14330876-14330910)
chr4 (180-225)||(17211783-17211829)
chr4 (177-231)||(44559887-44559939)
chr4 (177-234)||(957053-957108)
chr4 (13-46)||(9489671-9489704)
chr4 (13-46)||(25762590-25762623)
chr4 (177-234)||(36776117-36776172)
chr4 (14-46)||(32938084-32938116)
chr4 (14-46)||(39588922-39588954)
chr4 (176-232)||(49064584-49064638)
[»] chr2 (58 HSPs)
chr2 (86-289)||(16581960-16582163)
chr2 (82-289)||(42240966-42241173)
chr2 (80-289)||(12968169-12968378)
chr2 (80-289)||(29906712-29906921)
chr2 (80-291)||(32734777-32734988)
chr2 (80-289)||(10360067-10360275)
chr2 (80-289)||(42120142-42120351)
chr2 (87-289)||(18393486-18393689)
chr2 (80-289)||(22493401-22493610)
chr2 (80-231)||(29067859-29068008)
chr2 (80-289)||(39394021-39394230)
chr2 (80-231)||(3936991-3937140)
chr2 (80-199)||(5420599-5420718)
chr2 (80-231)||(17424919-17425068)
chr2 (80-231)||(43982986-43983135)
chr2 (80-199)||(3941867-3941986)
chr2 (80-231)||(22001964-22002113)
chr2 (80-234)||(35491765-35491920)
chr2 (80-232)||(17796033-17796183)
chr2 (80-232)||(29111288-29111438)
chr2 (80-234)||(6976966-6977121)
chr2 (80-233)||(10364560-10364713)
chr2 (80-160)||(27130505-27130585)
chr2 (80-160)||(37312491-37312571)
chr2 (80-160)||(40677371-40677451)
chr2 (80-160)||(41499090-41499170)
chr2 (83-230)||(19471559-19471707)
chr2 (80-289)||(33404145-33404349)
chr2 (102-234)||(43491602-43491735)
chr2 (82-160)||(2919361-2919439)
chr2 (80-233)||(34521606-34521760)
chr2 (139-289)||(39799738-39799886)
chr2 (80-203)||(27650381-27650503)
chr2 (102-232)||(16253607-16253735)
chr2 (83-166)||(6902099-6902182)
chr2 (106-208)||(31991885-31991986)
chr2 (172-287)||(10359854-10359968)
chr2 (82-166)||(20148250-20148334)
chr2 (171-289)||(16582260-16582376)
chr2 (106-225)||(15891578-15891697)
chr2 (175-231)||(18393842-18393898)
chr2 (177-234)||(37312088-37312143)
chr2 (178-234)||(2918963-2919017)
chr2 (177-233)||(6977394-6977448)
chr2 (180-231)||(32735139-32735191)
chr2 (11-46)||(3941731-3941766)
chr2 (11-46)||(10364814-10364849)
chr2 (11-46)||(16581816-16581851)
chr2 (11-46)||(19471811-19471846)
chr2 (171-282)||(22493714-22493824)
chr2 (11-46)||(35491629-35491664)
chr2 (11-46)||(39393885-39393920)
chr2 (171-289)||(42120448-42120565)
chr2 (180-234)||(10364230-10364282)
chr2 (177-234)||(34521339-34521394)
chr2 (177-234)||(19471222-19471277)
chr2 (13-46)||(27130686-27130719)
chr2 (174-226)||(3936668-3936719)
[»] chr8 (47 HSPs)
chr8 (80-289)||(43693273-43693482)
chr8 (86-289)||(40414752-40414953)
chr8 (80-289)||(38033794-38034003)
chr8 (83-286)||(43638549-43638752)
chr8 (80-289)||(40415393-40415602)
chr8 (80-289)||(42168829-42169038)
chr8 (80-277)||(33799432-33799629)
chr8 (80-289)||(34615089-34615298)
chr8 (80-291)||(28706009-28706220)
chr8 (80-231)||(15032253-15032402)
chr8 (80-289)||(26452461-26452669)
chr8 (80-289)||(24861479-24861687)
chr8 (80-231)||(485187-485336)
chr8 (82-289)||(2417053-2417258)
chr8 (80-199)||(41275530-41275649)
chr8 (94-289)||(22549232-22549423)
chr8 (80-197)||(41363792-41363909)
chr8 (80-160)||(41856972-41857052)
chr8 (80-231)||(31171744-31171894)
chr8 (80-160)||(44943079-44943159)
chr8 (80-160)||(18440293-18440373)
chr8 (80-152)||(40702496-40702568)
chr8 (80-160)||(42603590-42603670)
chr8 (171-289)||(22549520-22549636)
chr8 (80-140)||(19242180-19242240)
chr8 (80-140)||(19315364-19315424)
chr8 (80-225)||(3589198-3589344)
chr8 (11-46)||(26452325-26452360)
chr8 (11-46)||(41275394-41275429)
chr8 (171-289)||(44050881-44050997)
chr8 (12-46)||(24861344-24861378)
chr8 (174-234)||(2417530-2417588)
chr8 (11-46)||(2416915-2416950)
chr8 (171-269)||(2417433-2417530)
chr8 (11-46)||(18440474-18440509)
chr8 (179-289)||(28705805-28705914)
chr8 (11-46)||(40415257-40415292)
chr8 (171-289)||(42168615-42168732)
chr8 (11-46)||(43693137-43693172)
chr8 (12-46)||(19242341-19242375)
chr8 (12-46)||(19315525-19315559)
chr8 (172-206)||(26452847-26452881)
chr8 (13-46)||(34614955-34614988)
chr8 (177-234)||(41856567-41856622)
chr8 (14-46)||(26484580-26484612)
chr8 (14-46)||(38034104-38034136)
chr8 (13-45)||(41363658-41363690)
[»] scaffold0176 (1 HSPs)
scaffold0176 (80-289)||(1918-2126)
[»] chr7 (65 HSPs)
chr7 (80-289)||(34140993-34141201)
chr7 (80-289)||(39477110-39477319)
chr7 (80-289)||(18237692-18237901)
chr7 (80-289)||(17183340-17183552)
chr7 (80-250)||(2205946-2206116)
chr7 (80-289)||(41217742-41217950)
chr7 (80-289)||(48220614-48220823)
chr7 (80-289)||(40588677-40588885)
chr7 (105-289)||(26601650-26601832)
chr7 (102-289)||(45363123-45363309)
chr7 (80-289)||(30360645-30360851)
chr7 (80-231)||(9367050-9367199)
chr7 (80-289)||(17839451-17839659)
chr7 (80-231)||(20564887-20565036)
chr7 (80-231)||(13920434-13920583)
chr7 (80-231)||(10523197-10523346)
chr7 (88-228)||(17320134-17320272)
chr7 (80-232)||(47269026-47269178)
chr7 (146-264)||(28978947-28979065)
chr7 (86-226)||(20378638-20378776)
chr7 (80-160)||(41048911-41048991)
chr7 (80-234)||(48270776-48270931)
chr7 (80-160)||(21187298-21187378)
chr7 (80-160)||(36393823-36393903)
chr7 (118-197)||(34139332-34139411)
chr7 (82-160)||(48315179-48315257)
chr7 (83-160)||(42735393-42735470)
chr7 (80-232)||(21614689-21614839)
chr7 (80-232)||(1642518-1642666)
chr7 (80-234)||(46862118-46862273)
chr7 (80-163)||(21650652-21650735)
chr7 (80-210)||(2356417-2356547)
chr7 (80-160)||(15337904-15337984)
chr7 (80-160)||(30354814-30354894)
chr7 (80-160)||(43351099-43351178)
chr7 (80-140)||(28114412-28114472)
chr7 (171-289)||(45362910-45363026)
chr7 (171-280)||(17183658-17183766)
chr7 (168-249)||(21614370-21614448)
chr7 (80-121)||(28979060-28979101)
chr7 (171-231)||(28978872-28978932)
chr7 (246-289)||(34157099-34157142)
chr7 (106-208)||(3380626-3380727)
chr7 (12-46)||(40588542-40588576)
chr7 (177-234)||(20877648-20877703)
chr7 (177-226)||(28113997-28114044)
chr7 (177-234)||(36393421-36393476)
chr7 (177-233)||(10224623-10224677)
chr7 (106-166)||(11824847-11824907)
chr7 (80-148)||(28066383-28066451)
chr7 (173-289)||(30360949-30361064)
chr7 (11-46)||(15338085-15338120)
chr7 (171-289)||(26601435-26601552)
chr7 (11-46)||(42682948-42682983)
chr7 (11-46)||(45363423-45363458)
chr7 (12-46)||(2356282-2356316)
chr7 (106-152)||(18149681-18149727)
chr7 (171-280)||(18238007-18238115)
chr7 (176-225)||(28113813-28113862)
chr7 (171-283)||(39476898-39477008)
chr7 (176-224)||(46861856-46861904)
chr7 (174-226)||(9366727-9366778)
chr7 (14-46)||(28979202-28979234)
chr7 (14-46)||(36394004-36394036)
chr7 (174-225)||(42735715-42735766)
[»] chr5 (58 HSPs)
chr5 (84-289)||(3601470-3601675)
chr5 (80-289)||(7082346-7082555)
chr5 (80-289)||(1971490-1971699)
chr5 (80-289)||(19400488-19400697)
chr5 (105-289)||(3458940-3459124)
chr5 (80-231)||(7162-7311)
chr5 (80-231)||(8576074-8576223)
chr5 (80-289)||(8538079-8538286)
chr5 (80-289)||(11346834-11347041)
chr5 (80-231)||(28881116-28881265)
chr5 (80-231)||(27661310-27661459)
chr5 (80-289)||(30709723-30709930)
chr5 (80-231)||(19036607-19036756)
chr5 (80-199)||(541598-541717)
chr5 (80-200)||(11027902-11028022)
chr5 (80-289)||(38854283-38854489)
chr5 (168-289)||(40011830-40011951)
chr5 (88-231)||(22283704-22283845)
chr5 (186-289)||(3169766-3169869)
chr5 (80-160)||(4724076-4724156)
chr5 (80-232)||(1400231-1400384)
chr5 (79-160)||(1694913-1694994)
chr5 (80-160)||(35565396-35565476)
chr5 (80-160)||(36350316-36350396)
chr5 (80-166)||(33370779-33370865)
chr5 (80-233)||(18308385-18308539)
chr5 (83-160)||(6793388-6793465)
chr5 (80-173)||(40009653-40009746)
chr5 (171-289)||(1971796-1971913)
chr5 (102-166)||(12742819-12742883)
chr5 (171-289)||(40012048-40012164)
chr5 (168-289)||(3601772-3601892)
chr5 (106-199)||(18920885-18920977)
chr5 (80-129)||(35927470-35927519)
chr5 (102-201)||(17195321-17195419)
chr5 (171-289)||(19400794-19400911)
chr5 (102-166)||(12805637-12805701)
chr5 (11-46)||(541818-541853)
chr5 (176-234)||(1171739-1171795)
chr5 (176-234)||(12805727-12805784)
chr5 (171-231)||(3170021-3170081)
chr5 (177-234)||(25498635-25498690)
chr5 (177-233)||(1695343-1695397)
chr5 (168-231)||(33371116-33371179)
chr5 (174-226)||(38854702-38854753)
chr5 (11-46)||(7082281-7082316)
chr5 (80-163)||(17366735-17366818)
chr5 (11-46)||(18308249-18308284)
chr5 (179-234)||(34683524-34683577)
chr5 (11-46)||(36350488-36350523)
chr5 (176-225)||(1695526-1695575)
chr5 (176-234)||(12742909-12742966)
chr5 (180-225)||(12806333-12806379)
chr5 (102-208)||(36311900-36312005)
chr5 (177-234)||(1399904-1399959)
chr5 (13-46)||(1400485-1400518)
chr5 (177-234)||(4723673-4723728)
chr5 (177-234)||(35565824-35565879)
[»] chr1 (99 HSPs)
chr1 (80-289)||(39224068-39224277)
chr1 (80-289)||(29707409-29707621)
chr1 (80-289)||(35576465-35576674)
chr1 (80-289)||(42571647-42571856)
chr1 (80-289)||(27035189-27035398)
chr1 (82-289)||(47487908-47488115)
chr1 (80-289)||(46180151-46180360)
chr1 (80-291)||(30309701-30309906)
chr1 (80-289)||(41874755-41874964)
chr1 (80-289)||(45689245-45689454)
chr1 (80-289)||(48568275-48568484)
chr1 (80-289)||(50068130-50068339)
chr1 (80-289)||(3658599-3658806)
chr1 (80-289)||(12791146-12791353)
chr1 (80-289)||(27486562-27486770)
chr1 (80-291)||(51269928-51270138)
chr1 (80-289)||(29762093-29762301)
chr1 (80-289)||(49427513-49427720)
chr1 (80-289)||(49262859-49263068)
chr1 (80-231)||(19160443-19160592)
chr1 (80-199)||(39856867-39856986)
chr1 (80-289)||(44337191-44337399)
chr1 (80-289)||(13635170-13635377)
chr1 (134-289)||(49598762-49598917)
chr1 (80-289)||(29436099-29436307)
chr1 (80-232)||(21484573-21484723)
chr1 (80-289)||(44597827-44598035)
chr1 (80-234)||(14173683-14173838)
chr1 (127-231)||(22527680-22527782)
chr1 (80-156)||(24270367-24270443)
chr1 (80-160)||(36909687-36909767)
chr1 (82-160)||(37778207-37778285)
chr1 (80-160)||(17686361-17686441)
chr1 (80-232)||(49396830-49396983)
chr1 (80-160)||(49926380-49926460)
chr1 (80-232)||(17697172-17697322)
chr1 (80-161)||(35586928-35587009)
chr1 (80-165)||(48215324-48215409)
chr1 (80-234)||(13973050-13973205)
chr1 (80-234)||(35185097-35185252)
chr1 (80-234)||(40533211-40533366)
chr1 (80-249)||(17372853-17373019)
chr1 (80-160)||(23342767-23342847)
chr1 (80-148)||(35526189-35526257)
chr1 (80-234)||(6435898-6436053)
chr1 (82-160)||(18170153-18170231)
chr1 (82-160)||(38046434-38046512)
chr1 (80-226)||(13283831-13283974)
chr1 (80-198)||(5765332-5765449)
chr1 (86-234)||(41780825-41780974)
chr1 (171-289)||(47487694-47487811)
chr1 (80-226)||(24363737-24363880)
chr1 (80-152)||(18842565-18842637)
chr1 (174-289)||(3658904-3659018)
chr1 (171-289)||(49262654-49262771)
chr1 (171-289)||(50067916-50068033)
chr1 (171-289)||(51270233-51270349)
chr1 (177-234)||(12790870-12790925)
chr1 (80-200)||(16532051-16532170)
chr1 (241-289)||(48226824-48226872)
chr1 (106-225)||(14772468-14772586)
chr1 (171-289)||(27034975-27035092)
chr1 (11-46)||(44597691-44597726)
chr1 (171-289)||(45689551-45689668)
chr1 (155-194)||(48226760-48226799)
chr1 (102-160)||(19262413-19262471)
chr1 (12-46)||(29762402-29762436)
chr1 (177-239)||(38044784-38044844)
chr1 (177-234)||(14173355-14173410)
chr1 (185-233)||(16098014-16098061)
chr1 (177-233)||(49397198-49397252)
chr1 (11-46)||(14173939-14173974)
chr1 (11-46)||(18170015-18170050)
chr1 (11-46)||(24270544-24270579)
chr1 (11-46)||(29435963-29435998)
chr1 (171-225)||(29707196-29707250)
chr1 (11-46)||(35587110-35587145)
chr1 (11-46)||(38046615-38046650)
chr1 (11-46)||(39224378-39224413)
chr1 (11-46)||(42571957-42571992)
chr1 (11-46)||(44337500-44337535)
chr1 (11-46)||(51269792-51269827)
chr1 (176-225)||(12790693-12790742)
chr1 (176-289)||(18170457-18170569)
chr1 (180-234)||(35185540-35185592)
chr1 (171-289)||(39223856-39223971)
chr1 (171-201)||(44336978-44337008)
chr1 (180-234)||(49925978-49926030)
chr1 (177-234)||(6436326-6436381)
chr1 (168-201)||(21484432-21484465)
chr1 (13-46)||(35576331-35576364)
chr1 (177-234)||(35586516-35586571)
chr1 (177-234)||(40532883-40532938)
chr1 (177-234)||(42571373-42571428)
chr1 (174-226)||(22528054-22528104)
chr1 (14-46)||(35184963-35184995)
chr1 (177-233)||(36910114-36910168)
chr1 (178-234)||(41781221-41781276)
chr1 (176-231)||(49397375-49397430)
[»] scaffold0192 (1 HSPs)
scaffold0192 (80-289)||(17787-17996)
[»] scaffold0589 (2 HSPs)
scaffold0589 (80-289)||(2395-2604)
scaffold0589 (13-46)||(2261-2294)
[»] scaffold0031 (1 HSPs)
scaffold0031 (88-231)||(85462-85603)
[»] scaffold0004 (1 HSPs)
scaffold0004 (102-232)||(64099-64227)
[»] scaffold0268 (1 HSPs)
scaffold0268 (88-231)||(14604-14745)
[»] scaffold0861 (1 HSPs)
scaffold0861 (171-289)||(2387-2504)


Alignment Details
Target: chr6 (Bit Score: 239; Significance: 1e-132; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 11 - 312
Target Start/End: Complemental strand, 3765936 - 3765634
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataacaacattaatcaaccacaacaattgccttactctggatcgatatgcgggtgacgctgctgagat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||| |||||||||    
T  3765936 cagagacacaaggagggtggaacaccttcggtataacaacattaatcaattacaacaattgtcttactctggatcgatatgcgggtgacgttgctgagat 3765837  T
Q  111 caactgaagatatcatcaaaagtttga-ttccgccagaagatcatcattagttagggtaaggtgcattccaactgcaacaattgtcttacctcttaaatg 209  Q
    ||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3765836 caactgaagatatcatcaaaagtttaaattccaccagaagatcatcattagttagggtaaggtgcattccaactgcaacaattgtcttacctctcaaatg 3765737  T
Q  210 gggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaaagattaaattatgggaaacagcaacataaa 309  Q
    |||||||||||||||| ||||||||||| |||||| ||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||    
T  3765736 gggtaattcaaacttgccaaacggccaggactcaagcatttggctcggcattcatgtttttcctttgaaaagattaaattctgggaaacagcaacgtaaa 3765637  T
Q  310 gct 312  Q
    |||    
T  3765636 gct 3765634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 801295 - 801502
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  801295 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 801394  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||| ||| || |||| |||||||||||||||  |||||||||  |||||| ||||| ||||||||||||| ||||||||||||||    
T  801395 aactacaacaattgtctt-cct-ttgaatgaggtaattcaaacttgcgaaacggccaagactcaagcatttcgctcggcattcatgtttttcctttgaaa 801492  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  801493 agattaaatt 801502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 35058814 - 35058605
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| |||||||||||||| ||||||||||||| |  || ||||| | |||||||| ||||||||||||||||||| ||||||    
T  35058814 tggatcgatatgcgggtaacgttgctgagatcaactaaagatatcatcaacatcttaattccacaagaagatcgtcattagttagggtaaggtacattcc 35058715  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||| |||||||||||  ||| | ||||| ||||| ||||||| ||||||||||||||    
T  35058714 aactacaacaattgtcttacctctcaaattgggtaattcaaacttgccaaacggccagggctctagcatttcgctcgacattcatgtttttcctttgaaa 35058615  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  35058614 agattaaatt 35058605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 29108270 - 29108478
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||| |  ||||||||||||||||||| ||||||||||||||||||||||||||    
T  29108270 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatgatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 29108369  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    ||||||||||||| ||||| |  || |||| | | ||||||||| || |||||   ||  |||||| ||||| ||||||||||||| |||||||||||||    
T  29108370 aactgcaacaattttcttatc-gttgaatgagataaattcaaacctgccaaac-aacatgactcaagcatttcgctcggcattcatgtttttcctttgaa 29108467  T
Q  279 aagattaaatt 289  Q
    |||||||||||    
T  29108468 aagattaaatt 29108478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 27640310 - 27640459
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  27640310 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattcc 27640409  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||| ||||||| ||| || |||| |||||||||||||||||||||    
T  27640410 aactacaacatttgtctt-cct-ttgaatgaggtaattcaaacttgtcaaac 27640459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 6205614 - 6205763
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  6205614 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattcc 6205713  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||| |||| || ||| || |||| |||||||||||||||||||||    
T  6205714 aactacaacatttgtatt-cct-ttgaatgaggtaattcaaacttgtcaaac 6205763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 11692581 - 11692730
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  11692581 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattcc 11692680  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||| |||| || ||| || |||| |||||||||||||||||||||    
T  11692681 aactacaacatttgtatt-cct-ttgaatgaggtaattcaaacttgtcaaac 11692730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 29066683 - 29066891
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||||||||||||||||||||| ||||| |  ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  29066683 tggatcgatatgcgggtgatgttgctgagatcaactgaagatatgatcaacaacttgattccgccagtagatcgtcattagttagggtaaggtgcattcc 29066782  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    ||||||||||||| ||||| || || ||||   | ||||||||| || |||||   ||  |||||| ||||| ||||||||||||| |||||||||||||    
T  29066783 aactgcaacaattttcttatct-ttgaatgatataaattcaaacctgccaaac-aacatgactcaagcatttcgctcggcattcatgtttttcctttgaa 29066880  T
Q  279 aagattaaatt 289  Q
    |||||||||||    
T  29066881 aagattaaatt 29066891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 29075696 - 29075904
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||||||||||||||||||||| ||||| |  ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  29075696 tggatcgatatgcgggtgatgttgctgagatcaactgaagatatgatcaacaacttgattccgccagcagatcgtcattagttagggtaaggtgcattcc 29075795  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    ||||||||||||| ||||| |  || |||| | | ||||||||| || |||||   ||  |||||| ||||| ||||||||||||| |||||||||||||    
T  29075796 aactgcaacaattttcttatc-gttgaatgagataaattcaaacctgccaaac-aacatgactcaagcatttcgctcggcattcatgtttttcctttgaa 29075893  T
Q  279 aagattaaatt 289  Q
    |||||||||||    
T  29075894 aagattaaatt 29075904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 29110668 - 29110876
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||||||||||||||||||||| ||||| |  ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  29110668 tggatcgatatgcgggtgatgttgctgagatcaactgaagatatgatcaacaacttgattccgccagcagatcgtcattagttagggtaaggtgcattcc 29110767  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    ||||||||||||| ||||| |  || |||| | | ||||||||| || |||||   ||  |||||| ||||| ||||||||||||| |||||||||||||    
T  29110768 aactgcaacaattttcttatc-gttgaatgagataaattcaaacctgccaaac-aacatgactcaagcatttcgctcggcattcatgtttttcctttgaa 29110865  T
Q  279 aagattaaatt 289  Q
    |||||||||||    
T  29110866 aagattaaatt 29110876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 88 - 231
Target Start/End: Complemental strand, 24021168 - 24021027
Alignment:
Q  88 tatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaa 187  Q
    ||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||| |||    
T  24021168 tatgcgggtgaagttgcttagatcaacttaagatatcatcaaaagtttgattccgccataaaatcgtcattagttagggtaaggtgcattccaactacaa 24021069  T
Q  188 caattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||||||||| ||| || ||||||||||||||||||||||||||    
T  24021068 caattgtctt-cct-ttgaatggggtaattcaaacttgtcaaac 24021027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 88 - 227
Target Start/End: Original strand, 2192535 - 2192672
Alignment:
Q  88 tatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaa 187  Q
    ||||||||||| | |||| ||||||||| ||||||||||||||| ||||||||||||| || ||| |||||||||||||||||||||||||||||| |||    
T  2192535 tatgcgggtgaagttgcttagatcaacttaagatatcatcaaaattttgattccgccataaaatcgtcattagttagggtaaggtgcattccaactacaa 2192634  T
Q  188 caattgtcttacctcttaaatggggtaattcaaacttgtc 227  Q
    |||||||||| ||| || ||||||||||||||||||||||    
T  2192635 caattgtctt-cct-ttgaatggggtaattcaaacttgtc 2192672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 232
Target Start/End: Original strand, 13402663 - 13402816
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--t 176  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| || || | |  ||||  |    
T  13402663 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaaatttgattccgccagaagatcgtcattaggtacggaatgaatgcacct 13402762  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacg 232  Q
    |||| || ||||||||||||| ||| || |||||||||||||||||||| ||||||    
T  13402763 tccagctacaacaattgtctt-cct-ttgaatggggtaattcaaacttgccaaacg 13402816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 80 - 234
Target Start/End: Complemental strand, 32027707 - 32027552
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--t 176  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || | |  ||||  |    
T  32027707 tggattgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatgaatgcacct 32027608  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||| || ||||||||||||| ||| || ||||||||||||||||| || ||||||||    
T  32027607 tccagctacaacaattgtctt-cct-ttgaatggggtaattcaaacatgccaaacggc 32027552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 32037766 - 32037686
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32037766 tggattgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 32037686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 80 - 234
Target Start/End: Complemental strand, 30257658 - 30257503
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--t 176  Q
    |||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||| ||  | | |  ||||  |    
T  30257658 tggatcgatatgtgggtgacgttgctgagatcaattgaagatatcatcaaaagtttgattccgctagaagatcgtcattaggtaccgaatgaatgcacct 30257559  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||| || ||||||||||||| |||| |||||||||||||||||||||| ||||||||    
T  30257558 tccagctacaacaattgtctt-cctc-taaatggggtaattcaaacttgccaaacggc 30257503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 34802972 - 34802895
Alignment:
Q  83 atcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||    
T  34802972 atcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgatttcgccaaaagatcgtcattag 34802895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 234
Target Start/End: Original strand, 14115167 - 14115318
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||| |||||||||| ||| || ||||||||||||||||||||||||| ||| |||||| ||||||||||  | ||||| ||||| || |  | ||||    
T  14115167 tggatcaatatgcgggtaacgttgttgagatcaactgaagatatcatcaagagtctgattctgccagaagatagtgattaggtaggg-aatgcaccttcc 14115265  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||| ||||||||||||| ||| |||||| |||||||||||||||| ||| ||||    
T  14115266 aactacaacaattgtctt-cct-ttaaatagggtaattcaaacttgccaagcggc 14115318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 12396906 - 12396986
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||||||| |  |||||||||||| |||||| |||||||    
T  12396906 tggatcgatatgcgggtaacgttgctgagatctactgaagatatcatcaacaacttgattccgccaaaagatcgtcattag 12396986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 112 - 159
Target Start/End: Complemental strand, 35021284 - 35021237
Alignment:
Q  112 aactgaagatatcatcaaaagtttgattccgccagaagatcatcatta 159  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  35021284 aactgaagatatcatcaaaagtttgattccgccagaagatcgtcatta 35021237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 225
Target Start/End: Original strand, 34134807 - 34134925
Alignment:
Q  106 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaacaattgtcttacctctta 205  Q
    ||||||||||||||| ||  |||| ||||||||||||| | |||||| | ||||| ||||| || |  | || ||||| ||||||||||||||||||| |    
T  34134807 gagatcaactgaagaaattctcaacagtttgattccgctaaaagatcgtgattaggtaggg-aatgcacctttcaactacaacaattgtcttacctctga 34134905  T
Q  206 aatggggtaattcaaacttg 225  Q
    |||||  |||||||||||||    
T  34134906 aatggaataattcaaacttg 34134925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 22305926 - 22305980
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtt 134  Q
    ||||||||||||||||||| | || | ||||||||||||||||||||||||||||    
T  22305926 tggatcgatatgcgggtgaagttggttagatcaactgaagatatcatcaaaagtt 22305980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 80 - 208
Target Start/End: Complemental strand, 17465414 - 17465287
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||   || ||| ||| ||||||||||||||||||  |||| ||||||||||||||| |||||| | ||||| ||| | ||    | ||||    
T  17465414 tggatcgatatgtttgtcacgttgcagagatcaactgaagatattctcaacagtttgattccgccaaaagatcgtgattaggtagag-aatacaccttcc 17465316  T
Q  180 aactgcaacaattgtcttacctcttaaat 208  Q
    |||| ||||||||||||||||||| ||||    
T  17465315 aactacaacaattgtcttacctctgaaat 17465287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 29066547 - 29066582
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||||||||||||||    
T  29066547 cagagacacaaggagggtggaacaccttcggtataa 29066582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 29075560 - 29075595
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||||||||||||||    
T  29075560 cagagacacaaggagggtggaacaccttcggtataa 29075595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 282
Target Start/End: Complemental strand, 801710 - 801606
Alignment:
Q  176 ttccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctt 274  Q
    |||||||| ||||||||||||||||| || |||||||| ||||||||| || ||||  | ||| |||||| ||||| || ||||||||||  ||||||||    
T  801710 ttccaactacaacaattgtcttacct-ttgaatggggtaaattcaaac-tggcaaaacgacaggactcaagcatttcgcccggcattcat-gttttcctt 801614  T
Q  275 tgaaaaga 282  Q
    ||||||||    
T  801613 tgaaaaga 801606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 14123153 - 14123099
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttg 225  Q
    ||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||||||    
T  14123153 gtgcattccaactacaaaaattgtcttacct-ttaaatggggtaaattcaaacttg 14123099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 289
Target Start/End: Complemental strand, 29067104 - 29066988
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||||||||||||||||||| | || |||| | | ||||||||| ||||||||   ||| |||||| ||||| ||||| | |||||  |||    
T  29067104 gtgcattccaactgcaacaattgtcttacat-ttgaatgagataaattcaaacctgtcaaac-aacaggactcaagcatttcgctcgacgttcat-gttt 29067008  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||||| ||||||    
T  29067007 tcctttgaaaagaataaatt 29066988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 289
Target Start/End: Complemental strand, 29108691 - 29108575
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||||||||||||||||||| | || |||| | | ||||||||| ||||||||   ||| |||||| ||||| ||||| | |||||  |||    
T  29108691 gtgcattccaactgcaacaattgtcttacat-ttgaatgagataaattcaaacctgtcaaac-aacaggactcaagcatttcgctcgacgttcat-gttt 29108595  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||||| ||||||    
T  29108594 tcctttgaaaagaataaatt 29108575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 34803111 - 34803076
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  34803111 cagagacacaaggagggtggaacacgttcggtataa 34803076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 12397334 - 12397386
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||||||| ||||    
T  12397334 tccaactgcaacaattatctt-cctct-aaatggggtaattcaaacttgttaaac 12397386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 13403362 - 13403309
Alignment:
Q  176 ttccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaa 229  Q
    |||||||| ||||||||||||||||| || |||||||| ||||||||||||||||    
T  13403362 ttccaactacaacaattgtcttacct-ttgaatggggtaaattcaaacttgtcaa 13403309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 35021208 - 35021161
Alignment:
Q  185 caacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  35021208 caacaattgtctt-cct-ttgaatggggtaattcaaacttgtcaaacggc 35021161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 35058392 - 35058444
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaact 223  Q
    ||||||||||||| ||||||||||||||||| || |||||||| ||||||||||    
T  35058392 gtgcattccaactacaacaattgtcttacct-ttgaatggggtaaattcaaact 35058444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 29110531 - 29110567
Alignment:
Q  11 cagagacacaagga-gggtggaacaccttcggtataa 46  Q
    |||||||||||||| ||||||||||||||||||||||    
T  29110531 cagagacacaaggatgggtggaacaccttcggtataa 29110567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 170; Significance: 3e-91; HSPs: 107)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 13895949 - 13895740
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||| |||||||||||||||    
T  13895949 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagcttgattccgctagaagatcgtcattagttaaggtaaggtgcattcc 13895850  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  13895849 aactgcaacaattgtcttacctctgaaatggggtaattcaaacttgtcaaacggccaggactcaagcatttcgctcggcattcatgtttttcctttgaaa 13895750  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  13895749 agattaaatt 13895740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 24702351 - 24702142
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||| ||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  24702351 tggatcgatatgcaggtgacgttgttgagatcaactgaagatatcatcaaaagcttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 24702252  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  24702251 aactgcaacaattgtcttacctctgaaatggggtaattcaaacttgccaaacggccaggactcaagcatttcgctcggcattcatgtttttcctttgaaa 24702152  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  24702151 agattaaatt 24702142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 19453308 - 19453099
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19453308 tggatcgatatgcgggtgacgttgctgagatcaactaaagatatcatcaaaagtttgattccaccagaagatcatcattagttagggtaaggtgcattcc 19453209  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||  |||||| ||||| ||||| ||||||| ||||||||||||||    
T  19453208 aactacaacaattctcttacctctgaaatggggtaattcaaacttgtcaaacggccatgactcaagcatttcgctcgacattcatgtttttcctttgaaa 19453109  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  19453108 agattaaatt 19453099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 34693369 - 34693160
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  34693369 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaactttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 34693270  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||| ||||| || || ||||||| ||||||||||||||    
T  34693269 aactgcaacaattgtcttacctctgaaatggggtaattcaaacttgccaaacggccaagactcaagcatttcgcgcgacattcatgtttttcctttgaaa 34693170  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  34693169 agattaaatt 34693160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 44927603 - 44927812
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44927603 tggatcgatatgcgggtgacgttgttgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 44927702  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    ||||||||||||||||||||||   ||||||||||||||||||||| ||||||| ||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  44927703 aactgcaacaattgtcttacctaaaaaatggggtaattcaaacttgccaaacggtcaggactcaagcatttcgctcggcattcatgtttttcctttgaaa 44927802  T
Q  280 agattaaatt 289  Q
    | ||||||||    
T  44927803 atattaaatt 44927812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 42383191 - 42383400
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| |  ||||||||||||||||||| ||||||||| ||  ||||||||||||    
T  42383191 tggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaacaagttgattccgccagaagatcgtcattagttgggacaaggtgcattcc 42383290  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||  |||||||||||| ||||||||||||||    
T  42383291 aactacaacaattgtcttacctctaaaatggggtaattcaaacttgccaaacggccatgactcaaacatttcactcggcattcatgtttttcctttgaaa 42383390  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  42383391 agattaaatt 42383400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 48087631 - 48087422
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| || |||||||| |||||||||| |||||| |||||||||||||||||||    
T  48087631 tggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaacagcttgattccaccagaagatcgtcattaattagggtaaggtgcattcc 48087532  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||| ||||| |||| |||||||| ||||| ||||||||    
T  48087531 aactacaacaattgtcttacctctaaaatggggtaattcaaacttgccaaacggccaggactcaagcatttcgctcagcattcatgttttttctttgaaa 48087432  T
Q  280 agattaaatt 289  Q
    ||| ||||||    
T  48087431 agaataaatt 48087422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 39417027 - 39416817
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| || |||||| |||||||||||| ||||||||||||||||||||||||||    
T  39417027 tggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaatagcttgatttcgccagaagatcgtcattagttagggtaaggtgcattcc 39416928  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacatttt-gctcggcattcatatttttcctttgaa 278  Q
    |||| ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||| |||||| |||||| |||| ||||| || |||||||||||||    
T  39416927 aactacaacaattgtcttacctctaaaatgggataattcaaacttgccaaacggccaggactcaagcattttcgctcagcattaatgtttttcctttgaa 39416828  T
Q  279 aagattaaatt 289  Q
    |||| ||||||    
T  39416827 aagaataaatt 39416817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 25576671 - 25576462
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| || ||||||||| ||||||||| |||||| |||||||||||||||||||    
T  25576671 tggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaatagcttgattccgtcagaagatcgtcattatttagggtaaggtgcattcc 25576572  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||| ||||| || | || ||||| ||||||||||||||    
T  25576571 aactacaacaattgtcttacctctgaaatggggtaattcaaacttgccaaacggccatgactcaagcatttcgcccagcgttcatgtttttcctttgaaa 25576472  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  25576471 agattaaatt 25576462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 42950099 - 42949890
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||||||| |  ||||||||||||||||||| ||||||||||||||||||||||||||    
T  42950099 tggatcgatatgcggtttacgttgctgagatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 42950000  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||| ||||||| ||||||||||||| |||||| | || |||||| ||||| |||| ||||| |||||||||||||||||    
T  42949999 aactacaacaattgtcttacctctgaaatgggataattcaaacttgccaaacgcctaggactcaagcatttcgctcagcatttatatttttcctttgaaa 42949900  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  42949899 agattaaatt 42949890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 44835566 - 44835357
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||| ||||||||||| | | || |||||||||||||| |||||||||| || ||||||||| ||||||||| ||||||||||||||||||||||||||    
T  44835566 tggatggatatgcgggtaaggttgttgagatcaactgaaaatatcatcaacagcttgattccgtcagaagatcgtcattagttagggtaaggtgcattcc 44835467  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||| || || ||||||||||||| ||||||||||||||    
T  44835466 aactacaacaattgtcttacctttgaaatggggtaattcaaacttgtcaaacggccaggactcaagcacttcgctcggcattcatgtttttcctttgaaa 44835367  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  44835366 agattaaatt 44835357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 47065827 - 47066036
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||| || |  ||||||||||||||||||| ||||||||||||||||||||||||||    
T  47065827 tggatcgatatgcgggtaacgttgctgagatcaactgaagatatcattaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 47065926  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||| ||||| ||||||||||||||| |||||||||| ||||| | ||||| |  | || ||||||||||||||||||||    
T  47065927 aactacaacaattgtcttacctctgaaatgaggtaattcaaacttgccaaacggccataactcgagcatttcgtccagcgttcatatttttcctttgaaa 47066026  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  47066027 agattaaatt 47066036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 80 - 250
Target Start/End: Complemental strand, 53826775 - 53826605
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||||||  || ||| |||||||||||||||||||||||||||| |  ||||||||||||||||||| ||||||||||||||||||||||||||    
T  53826775 tggatcgatatgcatgtaacgttgctgagatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 53826676  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattt 250  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||| |||||    
T  53826675 aactacaacaattgtcttacctctgaaatggggtaattcaaacttgtcaaacggccatgactcaagcattt 53826605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 82 - 231
Target Start/End: Complemental strand, 2268571 - 2268424
Alignment:
Q  82 gatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaa 181  Q
    ||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2268571 gatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattccaa 2268472  T
Q  182 ctgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    || ||||||||||||| ||| || ||||||||||||||||||||||||||    
T  2268471 ctacaacaattgtctt-cct-ttgaatggggtaattcaaacttgtcaaac 2268424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 49218815 - 49218607
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||||||| |||||| |||||||||||||||||||||| ||||| |  ||||||||||||||||||| |||||||||||||||| |||||||||    
T  49218815 tggatcgatatgcgagtgacgttgctgagatcaactgaagatattatcaacaacttgattccgccagaagatcgtcattagttagggtaaagtgcattcc 49218716  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    |||||||||||||||||||||| || |||| | | ||||||||| ||||||||   ||| |||| | ||||| ||||||||||||| |||||| ||||||    
T  49218715 aactgcaacaattgtcttacct-ttgaatgagataaattcaaacatgtcaaac-aacaggactcgagcatttcgctcggcattcatgtttttcttttgaa 49218618  T
Q  279 aagattaaatt 289  Q
    |||||||||||    
T  49218617 aagattaaatt 49218607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 82 - 231
Target Start/End: Original strand, 50997530 - 50997677
Alignment:
Q  82 gatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaa 181  Q
    ||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  50997530 gatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattccaa 50997629  T
Q  182 ctgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    || |||||||||| ||  || || ||||||||||||||||||||||||||    
T  50997630 ctacaacaattgtatt--cttttgaatggggtaattcaaacttgtcaaac 50997677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 4004166 - 4004017
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||    
T  4004166 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattctgccagaagatcgtcattagttagagtaaggtgcattcc 4004067  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||||||||||| ||| || ||||||||||||||||||||||||||    
T  4004066 aactacaacaattgtctt-cct-ttgaatggggtaattcaaacttgtcaaac 4004017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 2646955 - 2646806
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  2646955 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgctagaagatcgtcattagttagggtaaggtgcattcc 2646856  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| |||||||||||||  |  || ||||||||||||||||| ||||||||    
T  2646855 aactacaacaattgtctt--catttgaatggggtaattcaaacctgtcaaac 2646806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 34049867 - 34050016
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  34049867 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattcc 34049966  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| |||||||||| || ||| || |||| |||||||||||||||||||||    
T  34049967 aactacaacaattgtatt-cct-ttgaatgaggtaattcaaacttgtcaaac 34050016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 49140133 - 49139984
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  49140133 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattcc 49140034  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| |||||||||| || ||| || |||| |||||||||||||||||||||    
T  49140033 aactacaacaattgtatt-cct-ttgaatgaggtaattcaaacttgtcaaac 49139984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 80 - 199
Target Start/End: Complemental strand, 51695685 - 51695566
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  51695685 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaacaacttgattccgccagaagatcatcattagttagggtaaggtgcattcc 51695586  T
Q  180 aactgcaacaattgtcttac 199  Q
    |||||||| |||||||||||    
T  51695585 aactgcaataattgtcttac 51695566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 54390582 - 54390731
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  54390582 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattcc 54390681  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| |||||||||| || ||| || |||| |||||||||||||||||||||    
T  54390682 aactacaacaattgtatt-cct-ttgaatgaggtaattcaaacttgtcaaac 54390731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 82 - 231
Target Start/End: Original strand, 36135149 - 36135296
Alignment:
Q  82 gatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaa 181  Q
    ||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||||    
T  36135149 gatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccagaagattgtcattagttagagtaagatgcattccaa 36135248  T
Q  182 ctgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    || ||||||||||||| ||| || ||||||||||||||||||||||||||    
T  36135249 ctacaacaattgtctt-cct-ttgaatggggtaattcaaacttgtcaaac 36135296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 3495108 - 3494959
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | || | ||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  3495108 tggatcgatatgcgggtgaagttgtttagatcaacttaagatatcatcaaaagtttgattctgccagaagatcgtcattagttagggtaaggtgcattcc 3495009  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||||||||||| ||| || ||||||||||||||||||| ||||||    
T  3495008 aactacaacaattgtctt-cct-ttgaatggggtaattcaaacttttcaaac 3494959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 46403143 - 46403292
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  46403143 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattcc 46403242  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||| |||| || ||| || |||| |||||||||||||||||||||    
T  46403243 aactacaacatttgtatt-cct-ttgaatgaggtaattcaaacttgtcaaac 46403292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 84 - 199
Target Start/End: Original strand, 49610633 - 49610748
Alignment:
Q  84 tcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaact 183  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |  ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  49610633 tcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattccaact 49610732  T
Q  184 gcaacaattgtcttac 199  Q
    ||||||||||||||||    
T  49610733 gcaacaattgtcttac 49610748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 43477197 - 43477405
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||| ||||||| || |||||||||| |||||||||||||| |  ||||||||||||||||||| |||||| ||||||||| |||||||||    
T  43477197 tggatcgatatgcaggtgacgttgatgagatcaaccgaagatatcatcaacaacttgattccgccagaagatcgtcattaattagggtaatgtgcattcc 43477296  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    |||| |||||| |||||||||| || |||| | | ||||||||| || |||||   ||| | |||| ||||| ||||||||||||| ||||| |||||||    
T  43477297 aacttcaacaactgtcttacct-ttgaatgagataaattcaaacctgccaaac-aacaggagtcaagcatttcgctcggcattcatgttttttctttgaa 43477394  T
Q  279 aagattaaatt 289  Q
    |||||||||||    
T  43477395 aagattaaatt 43477405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 198
Target Start/End: Original strand, 42382411 - 42382529
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| |  ||||||||||||||||||| ||||||||| ||  || |||||||||    
T  42382411 tggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaacaagttgattccgccagaagatcgtcattagttgggacaatgtgcattcc 42382510  T
Q  180 aactgcaacaattgtctta 198  Q
    |||| ||||||||||||||    
T  42382511 aactacaacaattgtctta 42382529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 30192678 - 30192758
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30192678 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 30192758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 55206963 - 55206883
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  55206963 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 55206883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 234
Target Start/End: Complemental strand, 51013354 - 51013202
Alignment:
Q  83 atcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--ttcc 179  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || | |  ||||  ||||    
T  51013354 atcgatatgcgggtgacgttgctaagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttcc 51013255  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    | || ||||||||||||| ||| || |||||||||||||||||||| ||||||||    
T  51013254 agctacaacaattgtctt-cct-ttgaatggggtaattcaaacttgccaaacggc 51013202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 80 - 210
Target Start/End: Complemental strand, 774417 - 774288
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| ||| ||||||| |||||||||| | ||||| ||||| || |  | ||||    
T  774417 tggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaagagtctgattccaccagaagatcgtgattaggtaggg-aatgcaccttcc 774319  T
Q  180 aactgcaacaattgtcttacctcttaaatgg 210  Q
    |||||||||||||||||||||||| ||||||    
T  774318 aactgcaacaattgtcttacctctgaaatgg 774288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 2428627 - 2428707
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  2428627 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgctagaagatcgtcattag 2428707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 34472155 - 34472075
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  34472155 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagttttattccgccagaagatcgtcattag 34472075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 41578046 - 41578126
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    |||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41578046 tggatcaatatgcgagtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 41578126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 46414413 - 46414333
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  46414413 tggatcgatatgcgggtgacgttgctgagatcaacttaagatatcatcaaaagtttgattccgccagaagatcgtcattag 46414333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 46346691 - 46346620
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagat 151  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46346691 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagat 46346620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 80 - 158
Target Start/End: Complemental strand, 36721468 - 36721390
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcatt 158  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36721468 tggatcgatatgctggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcatt 36721390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 7246237 - 7246314
Alignment:
Q  83 atcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7246237 atcgatatgcgggtgacgttgcttagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 7246314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 10053353 - 10053274
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  10053353 tggatcgatatgcgggtgacgttgctgagatcaactgaa-atatcatcaaaagtttgattccgccagaagatcgtcattag 10053274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 37281592 - 37281672
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  37281592 tggatcgatatgcgggtgacgttgctgagatcaacggaagatatcatcaaaagtttaattccgccagaagatcgtcattag 37281672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 45100544 - 45100464
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||    
T  45100544 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccataatatcgtcattag 45100464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 51015417 - 51015497
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  51015417 tggatcgatatgcgggaaacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 51015497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 102 - 249
Target Start/End: Complemental strand, 33449208 - 33449065
Alignment:
Q  102 tgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaacaattgtcttacct 201  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||| ||||| || |  | |||||||| |||||||||| || |||    
T  33449208 tgctgagatcaactgaagatatcatccaaagtttgattccgccagaagatcgtaattaggtaggg-aatgcaccttccaactacaacaattgt-tttcct 33449111  T
Q  202 cttaaatggggtaattcaaacttgtcaaacggccagaactcaaacatt 249  Q
    | |  ||||||||||||||||||||||||||| ||| |||||||||||    
T  33449110 c-tggatggggtaattcaaacttgtcaaacgg-caggactcaaacatt 33449065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 232
Target Start/End: Original strand, 6754346 - 6754495
Alignment:
Q  82 gatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaa 181  Q
    ||||||||||||||| ||| |||||||||||||||||||||| ||||| ||| |||||| || |||||||| | ||||  ||||| || |  | ||||||    
T  6754346 gatcgatatgcgggtaacgttgctgagatcaactgaagatattatcaacagtctgattctgctagaagatcgtgattatgtagggaaatgcaccttccaa 6754445  T
Q  182 ctgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacg 232  Q
    || |||||| ||||||| |||| |||||||||||||||||||||| |||||    
T  6754446 ctacaacaactgtctta-ctctgaaatggggtaattcaaacttgttaaacg 6754495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 52569485 - 52569408
Alignment:
Q  83 atcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    |||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  52569485 atcgatatgcgggtgacattgctgagatcaactgaagatatcatcaagagtttgattccgccagaagatcgtcattag 52569408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 34647346 - 34647266
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||    
T  34647346 tggattgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattacgctagaagatcgtcattag 34647266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 47759970 - 47759890
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||| | ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  47759970 tggatcgatgtacgggtgacgttgctgagatcaactaaagatatcatcaaaagtttgattccgccagaagatcgtcattag 47759890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 18440885 - 18441038
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||||| | || ||| |||||||||||||||||||||| ||||| ||||||||||| |||||||||| | ||||| ||| | || |  | ||||    
T  18440885 tggatcgatatgtgtgtaacgttgctgagatcaactgaagatattatcaacagtttgattccaccagaagatcgtgattaggtagag-aatgcaccttcc 18440983  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggcc 235  Q
    |||| |||||||||||||| |||| |||| ||||||||||| ||||| ||||||||    
T  18440984 aactacaacaattgtctta-ctctgaaattgggtaattcaagcttgttaaacggcc 18441038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 19485959 - 19486112
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||||| | || ||| |||||||||||||||||||||| ||||| ||||||||||| |||||||||| | ||||| ||| | || |  | ||||    
T  19485959 tggatcgatatgtgtgtaacgttgctgagatcaactgaagatattatcaacagtttgattccaccagaagatcgtgattaggtagag-aatgcaccttcc 19486057  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggcc 235  Q
    |||| |||||||||||||| |||| |||| ||||||||||| ||||| ||||||||    
T  19486058 aactacaacaattgtctta-ctctgaaattgggtaattcaagcttgttaaacggcc 19486112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 14631585 - 14631665
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||| ||||||||||||||| || ||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  14631585 tggattgatatgcgggtgacgttgttgagatcaactaaagatatcatcaaaagtttgattctgccagaagatcgtcattag 14631665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 42323468 - 42323388
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |  ||||||| |||||||    
T  42323468 tggatcgatatgctggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccactggaagatcgtcattag 42323388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 43570050 - 43570122
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatc 152  Q
    ||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  43570050 tggatcgatatgcgggtaacgttgctgagatcaattgaagatatcatcaaaagtttgatttcgccagaagatc 43570122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 50458770 - 50458690
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||| ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  50458770 tggatagatatgcgggtgacgttgttgagataaactgaagatatcatcaaaagtttgattccgcctgaagatcgtcattag 50458690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 6464424 - 6464274
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||||| |||| ||| |||||||||||||||||||||| ||||| ||| |||||| || |||||||| | ||||  ||||| || |  | ||||    
T  6464424 tggatcgatatgtgggtaacgttgctgagatcaactgaagatattatcaacagtctgattctgcaagaagatcgtgattatatagggaaatgcaccttcc 6464325  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| |||||| | ||||| |||| |||||||||||||||||||||| ||||    
T  6464324 aactacaacaactctctta-ctctgaaatggggtaattcaaacttgttaaac 6464274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 8633438 - 8633236
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| || || ||||| |||||||||| ||||| ||| |||||||||||||||||| ||||||| ||  | |   ||||  ||    
T  8633438 tggatcgatatgcgggtaacgttgttgcgatcatctgaagatattatcaacagtctgattccgccagaagatcgtcattaggtaccgaa---tgcacccc 8633342  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||| ||| || |||| ||||||||||||||||||||||| ||| |||| | || || | ||||||||  |||| ||||||| |||    
T  8633341 aactacaacaattgtctt-cct-ttgaatgaggtaattcaaacttgtcaaacgg-caggactccagca-ttcgatcggcatttctattgttcctttcaaa 8633246  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  8633245 agattaaatt 8633236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 41804042 - 41804122
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    |||||||||||| | |||||| || ||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||    
T  41804042 tggatcgatatgagagtgacgttgatgagatcaaatgaagatataatcaaaagtttgattccgccagaagatcgtcattag 41804122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 49273541 - 49273619
Alignment:
Q  82 gatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    |||| ||||| |||||||| ||||||||||||||||| |||||||||||||||||||||  |||||| ||| |||||||    
T  49273541 gatcaatatgtgggtgacgttgctgagatcaactgaatatatcatcaaaagtttgattcttccagaatatcgtcattag 49273619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 7954344 - 7954552
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--t 176  Q
    ||||||||||||||||| | | |||| ||||||||||||||||| ||||| | | ||||||||| |||||||| ||||||| || || | |  ||||  |    
T  7954344 tggatcgatatgcgggtaaagttgctaagatcaactgaagatattatcaacaatctgattccgctagaagatcgtcattaggtacggaatgaatgcacct 7954443  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttg 276  Q
    || |||| ||||||||||||| ||| || |||| ||||||||||||||| |||||||| || |||| |||| || | ||| ||||  |||| |||||||     
T  7954444 tctaactacaacaattgtctt-cct-ttgaatgaggtaattcaaacttgccaaacggcaag-actccaaca-ttcgatcgacatttctattgttcctttc 7954539  T
Q  277 aaaagattaaatt 289  Q
    |||||||||||||    
T  7954540 aaaagattaaatt 7954552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 171 - 289
Target Start/End: Original strand, 11378634 - 11378751
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggtaa-ttcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||| ||||||||||||| ||| || |||||||||| |||||||||| |||||  | || |||||| ||||||||   |||||||| ||||    
T  11378634 gtgcattccaactccaacaattgtcttgcct-ttgaatggggtaaattcaaacttgccaaacaac-aggactcaagcattttgcctcgcattcatgtttt 11378731  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||||| ||||||    
T  11378732 tcctttgaaaagaataaatt 11378751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 11378909 - 11378846
Alignment:
Q  187 acaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattt 250  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||  |||||| |||||    
T  11378909 acaattgtcttacctctgaaatggggtaattcaaacttgtcaaacgaccatgactcaagcattt 11378846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 171 - 289
Target Start/End: Original strand, 44835144 - 44835260
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||| ||||||||||||||||| || |||||||| |||||||||||  |||||   ||| |||||||||||| || ||||||||||  |||    
T  44835144 gtgcattccaactacaacaattgtcttacct-ttgaatggggtaaattcaaacttaccaaac-aacaggactcaaacatttcgcccggcattcat-gttt 44835240  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||||| ||||||    
T  44835241 tcctttgaaaagaataaatt 44835260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 234
Target Start/End: Complemental strand, 20375959 - 20375809
Alignment:
Q  82 gatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaa 181  Q
    |||||||||||| || ||| |||||||||||| | ||||||  | |||  |||||||||||||| || ||| | ||||| ||||| || |  | ||||||    
T  20375959 gatcgatatgcgtgtaacgttgctgagatcaatttaagataataacaactgtttgattccgccaaaatatcgtgattaggtaggg-aatgcaccttccaa 20375861  T
Q  182 ctgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    || ||| |||||||||| |||| ||||||| |||||||||||||| |||||||    
T  20375860 ctacaaaaattgtctta-ctctgaaatgggttaattcaaacttgttaaacggc 20375809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 289
Target Start/End: Original strand, 13895527 - 13895643
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||| ||||||||||||||||| || |||||||| |||||||||||| |||||   ||| ||||||||||||  | ||||||||||  |||    
T  13895527 gtgcattccaactacaacaattgtcttacct-ttgaatggggtcaattcaaacttgccaaac-aacaggactcaaacatttcacccggcattcat-gttt 13895623  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||| | ||||||    
T  13895624 tcctttgaaaaaaataaatt 13895643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 289
Target Start/End: Original strand, 24701929 - 24702045
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||| ||||||||||||||||| || |||||||| |||||||||||| |||||  || | |||||| |||||  | ||||||||||  |||    
T  24701929 gtgcattccaactacaacaattgtcttacct-ttgaatggggtaaattcaaacttgccaaacaacctg-actcaagcatttcacccggcattcat-gttt 24702025  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||||| ||||||    
T  24702026 tcctttgaaaagaataaatt 24702045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 289
Target Start/End: Original strand, 34692947 - 34693063
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||| |||||||||||||||||  | |||||||| |||||||||||| |||||   ||| ||||||||||||  | ||||||||||  |||    
T  34692947 gtgcattccaactccaacaattgtcttacct-gtgaatggggtcaattcaaacttgccaaac-aacaggactcaaacatttcacccggcattcat-gttt 34693043  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||||| ||||||    
T  34693044 tcctttgaaaagaataaatt 34693063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 289
Target Start/End: Complemental strand, 44928025 - 44927909
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||| ||||||||||||||||| || |||||||| |||||||||||| ||| |   ||| ||||||||||||  | ||||||||||  |||    
T  44928025 gtgcattccaactacaacaattgtcttacct-ttgaatggggtcaattcaaacttgccaagc-aacaggactcaaacatttcacccggcattcat-gttt 44927929  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||||| ||||||    
T  44927928 tcctttgaaaagaataaatt 44927909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 80 - 166
Target Start/End: Original strand, 27187088 - 27187174
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttaggg 166  Q
    ||||||||||||||||| ||| |||||||||||||| ||||||| ||||| | | ||||||||||| || ||| | ||||| |||||    
T  27187088 tggatcgatatgcgggtaacgttgctgagatcaactaaagatattatcaacaatctgattccgccataatatcgtgattaggtaggg 27187174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 225
Target Start/End: Complemental strand, 25887665 - 25887543
Alignment:
Q  105 tgagatcaactgaagatatcatcaaaagtttgattccgccagaagatc---atcattagttagggtaaggtgcattccaactgcaacaattgtcttacct 201  Q
    |||||||||||||||||||  || | ||||||||||||| |||| |||   || ||||| ||||| || |  | |||||||| |||||||||||||||||    
T  25887665 tgagatcaactgaagatattctccacagtttgattccgctagaatatcgtgattattaggtaggg-aatgcaccttccaactacaacaattgtcttacct 25887567  T
Q  202 cttaaatggggtaattcaaacttg 225  Q
     | ||||||| |||||||||||||    
T  25887566 atgaaatgggataattcaaacttg 25887543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 42323041 - 42322986
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||    
T  42323041 tccaactgcaacaattgtctt-cctct-aaatggggtaattcaaacttgttaaacggc 42322986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 51695821 - 51695786
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||||||||||||||    
T  51695821 cagagacacaaggagggtggaacaccttcggtataa 51695786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 34646868 - 34646811
Alignment:
Q  176 ttccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||||||||||||||||||||| ||||| ||  |||||||||||||||||| |||||||    
T  34646868 ttccaactgcaacaattgtctt-cctctaaatgggggtaattcaaacttgttaaacggc 34646811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 289
Target Start/End: Complemental strand, 37282010 - 37281898
Alignment:
Q  176 ttccaactgcaacaattgtcttacctcttaaatggggtaa-ttcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctt 274  Q
    |||||||| |||||||||| |||||| || |||||||||| |||||||| | |||||  | || |||||| ||||| || |||||||||| |||||||||    
T  37282010 ttccaactacaacaattgtgttacct-ttgaatggggtaaattcaaactggccaaacaac-aggactcaagcatttcgcccggcattcatgtttttcctt 37281913  T
Q  275 tgaaaagattaaatt 289  Q
    |||||| | ||||||    
T  37281912 tgaaaataataaatt 37281898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 43570478 - 43570538
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaa 239  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||||||| ||||||| ||||    
T  43570478 tccaactgcaacaattgtctt-cct-ttgaatggggtaattcaaacttgttaaacggcaagaa 43570538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 291
Target Start/End: Original strand, 37281769 - 37281802
Alignment:
Q  258 cattcatatttttcctttgaaaagattaaattat 291  Q
    ||||||||||||||||||||||||||||||||||    
T  37281769 cattcatatttttcctttgaaaagattaaattat 37281802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 45100126 - 45100071
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||||||| |||||||    
T  45100126 tccaactgcaacaattgtctt-cct-ttgaatggggtaattcaaacttgttaaacggc 45100071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 46346263 - 46346208
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||||| |||||||    
T  46346263 tccaactgcaacaattgtctt-cctctgaa-tggggtaattcaaacttgttaaacggc 46346208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 14631449 - 14631484
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  14631449 cagagacacaaggagggtggaacacgttcggtataa 14631484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 289
Target Start/End: Original strand, 25576248 - 25576365
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||| ||||||||||||||||| || |||||||| |||||||||| | |||||   ||| |||||| ||||| || | |  ||||| ||||    
T  25576248 gtgcattccaactacaacaattgtcttacct-ttgaatggggtaaattcaaactggccaaac-aacaggactcaagcatttcgccccgtgttcatgtttt 25576345  T
Q  270 tcctttgaaaagattaaatt 289  Q
    |||||| |||||| ||||||    
T  25576346 tccttttaaaagaataaatt 25576365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 30192542 - 30192577
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  30192542 cagagacacaaggagggtggaacacgttcggtataa 30192577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 42328331 - 42328296
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  42328331 cagagacacaaggagggtggaacacgttcggtataa 42328296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 43477061 - 43477096
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||||||||||||||||||| |||||||    
T  43477061 cagagacacaaggagggtggaacacctttggtataa 43477096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 46414549 - 46414514
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  46414549 cagagacacaaggagggtggaacacgttcggtataa 46414514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 49610493 - 49610528
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||||||||||||||||||||| |||||    
T  49610493 cagagacacaaggagggtggaacaccttcgatataa 49610528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 51013493 - 51013458
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  51013493 cagagacacaaggagggtggaacacgttcggtataa 51013458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 46
Target Start/End: Complemental strand, 13896084 - 13896050
Alignment:
Q  12 agagacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||||||||||||||| ||||||||||    
T  13896084 agagacacaaggagggtggaacacgttcggtataa 13896050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 37282071 - 37282127
Alignment:
Q  176 ttccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||||||||||||||| || ||| || ||||||||||||||||||||| |||||||    
T  37282071 ttccaactgcaacaattgtttt-cct-ttgaatggggtaattcaaacttgttaaacggc 37282127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 289
Target Start/End: Complemental strand, 42383613 - 42383497
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatattttt 270  Q
    ||||||||||||| |||||||||||||| || | || |||   |||||||||||| |||||   ||| |||||| |||||  | ||||||||||  ||||    
T  42383613 gtgcattccaactacaacaattgtcttatctttgaattggataaattcaaacttgccaaac-aacaggactcaagcatttcacccggcattcat-gtttt 42383516  T
Q  271 cctttgaaaagattaaatt 289  Q
    |||||||||||| ||||||    
T  42383515 cctttgaaaagaataaatt 42383497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 46413972 - 46413917
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||||||||||||||||||||  |  || ||||||||||||||||||||| |||||||    
T  46413972 tccaactgcaacaattgtctt--catttgaatggggtaattcaaacttgttaaacggc 46413917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 46
Target Start/End: Complemental strand, 49218950 - 49218916
Alignment:
Q  12 agagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||||| |||||||    
T  49218950 agagacacaaggagggtggaacacctttggtataa 49218916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 46
Target Start/End: Original strand, 49273404 - 49273438
Alignment:
Q  12 agagacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||||||||||||||| ||||||||||    
T  49273404 agagacacaaggagggtggaacacattcggtataa 49273438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 51015845 - 51015900
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||||||||||||||||||||  |  || ||||||||||||||||||||| |||||||    
T  51015845 tccaactgcaacaattgtctt--catttgaatggggtaattcaaacttgttaaacggc 51015900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 2429055 - 2429110
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||||||||||||||||| |||| | |||||||||||| |||||||| |||||||    
T  2429055 tccaactgcaacaattgtctt-cctc-tgaatggggtaatttaaacttgttaaacggc 2429110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 6464012 - 6464057
Alignment:
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaactt 224  Q
    |||| ||||||||||||||||||| ||||||||| |||||||||||    
T  6464012 aactacaacaattgtcttacctctgaaatggggtaaattcaaactt 6464057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 10053037 - 10052982
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||||||||||||||||| ||| || ||| ||||||||||||||||| |||||||    
T  10053037 tccaactgcaacaattgtctt-cct-ttgaattgggtaattcaaacttgttaaacggc 10052982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 11378957 - 11378924
Alignment:
Q  13 gagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||| ||||||||||    
T  11378957 gagacacaaggagggtggaacacgttcggtataa 11378924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 34693503 - 34693470
Alignment:
Q  13 gagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||||| ||||||    
T  34693503 gagacacaaggagggtggaacaccttcagtataa 34693470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 44927469 - 44927502
Alignment:
Q  13 gagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||| ||||||||||    
T  44927469 gagacacaaggagggtggaacacgttcggtataa 44927502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 52569060 - 52569005
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||||||||||||||||| ||||| || || |||||||||||||||| |||||||    
T  52569060 tccaactgcaacaattgtctt-cctctgaa-tgaggtaattcaaacttgttaaacggc 52569005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 15637226 - 15637273
Alignment:
Q  176 ttccaactgcaacaattgtcttacctcttaaatggggtaattcaaactt 224  Q
    |||||||| |||||||||||||| |||| ||||| ||||||||||||||    
T  15637226 ttccaactacaacaattgtctta-ctctgaaatgaggtaattcaaactt 15637273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 24702483 - 24702451
Alignment:
Q  14 agacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||||||||||||| ||||||||||    
T  24702483 agacacaaggagggtggaacacgttcggtataa 24702451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 34472288 - 34472256
Alignment:
Q  14 agacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||||||||||||| ||||||||||    
T  34472288 agacacaaggagggtggaacacattcggtataa 34472256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 34646929 - 34646984
Alignment:
Q  176 ttccaactgcaacaattgtcttacctcttaaatggggtaa-ttcaaacttgtcaaac 231  Q
    |||||||| |||||||||| |||||| || |||||||||| ||||||||||||||||    
T  34646929 ttccaactacaacaattgtgttacct-ttgaatggggtaaattcaaacttgtcaaac 34646984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 36721601 - 36721569
Alignment:
Q  14 agacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||||||||||||| ||||||||||    
T  36721601 agacacaaggagggtggaacacgttcggtataa 36721569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 42322817 - 42322872
Alignment:
Q  176 ttccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaac 231  Q
    |||| |||||||||||| ||||||||| |||||||||| ||||||||||||| ||||    
T  42322817 ttcctactgcaacaattttcttacctc-taaatggggtaaattcaaacttgttaaac 42322872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 45100677 - 45100645
Alignment:
Q  14 agacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||||||||||||| ||||||||||    
T  45100677 agacacaaggagggtggaacacgttcggtataa 45100645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 51015284 - 51015316
Alignment:
Q  14 agacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||||||||||||| ||||||||||    
T  51015284 agacacaaggagggtggaacacgttcggtataa 51015316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 163; Significance: 5e-87; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 49064105 - 49064315
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  49064105 tggatcgatatgcgggtgacgttgcttagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 49064204  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcat-atttttcctttgaa 278  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| |||||||||||||  |||||||||||||    
T  49064205 aactacaacaattgtcttacctcttaaatggggtaattcaaacttgccaaacggccaggactcaagcatttcgctcggcattcatgttttttcctttgaa 49064304  T
Q  279 aagattaaatt 289  Q
    || ||||||||    
T  49064305 aatattaaatt 49064315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 21711656 - 21711865
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||| |  ||||||||||||||||||| ||||||||||||||||||||||||||    
T  21711656 tggatcgatatgcgggtgacgttgctgagatcaactaaagatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 21711755  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| |||||||| |||||||||| ||||||||||||||||||||| ||||||||||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  21711756 aactacaacaattctcttacctctgaaatggggtaattcaaacttgccaaacggccaggactcaagcatttcgctcggcattcatgtttttcctttgaaa 21711855  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  21711856 agattaaatt 21711865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 33163625 - 33163416
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||||| |||| ||| || ||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||    
T  33163625 tggatcgatatgtgggtaacgttgttgagatcaactgaagatatcatcaacagcttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 33163526  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||| |||||||||||||||| |||||||||| ||||||||||| |||||||||||| ||||| ||||||| ||||||||||||||    
T  33163525 aactacaacaattgtcttgcctcttaaatggggtatttcaaacttgccaaacggccaggactcaaacatttcgctcgacattcatgtttttcctttgaaa 33163426  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  33163425 agattaaatt 33163416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 51428273 - 51428064
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| || ||||||||||||||||||||||||| || |||||||||| |||||||| ||||||||||||||||||||||||||    
T  51428273 tggatcgatatgcgggtaacgttgttgagatcaactgaagatatcatcaacagcttgattccgcaagaagatcgtcattagttagggtaaggtgcattcc 51428174  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||| ||||| | ||||||||||| ||||||||||||||    
T  51428173 aactacaacaattgtcttacctctgaaatggggtaattcaaacttggcaaacggccaggactcaagcatttcgatcggcattcatgtttttcctttgaaa 51428074  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  51428073 agattaaatt 51428064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 80 - 291
Target Start/End: Original strand, 37866533 - 37866744
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |  |||||||||| |||||||| ||||||||||||||||||||||||||    
T  37866533 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaatatcttgattccgctagaagatcgtcattagttagggtaaggtgcattcc 37866632  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||||||||| | ||||||||||| ||||||||||||||||||||| ||||||||||| |||||| ||||| ||||||||||||| |||||||| |||||    
T  37866633 aactgcaacagtcgtcttacctctgaaatggggtaattcaaacttgccaaacggccaggactcaagcatttcgctcggcattcatgtttttcctgtgaaa 37866732  T
Q  280 agattaaattat 291  Q
    | ||||||||||    
T  37866733 atattaaattat 37866744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 25762724 - 25762933
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| |  ||||||||||||||||||| ||||||||||||||||||||||||||    
T  25762724 tggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 25762823  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||| ||||| ||   |||||||| ||||||||||||||    
T  25762824 aactgcaacaattgtcttacctctaaaatggggtaattcaaacttgtcaaacggccatgactcaagcatttcgccaagcattcatgtttttcctttgaaa 25762923  T
Q  280 agattaaatt 289  Q
    | ||||||||    
T  25762924 atattaaatt 25762933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 27759453 - 27759662
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||||||| || ||| |||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||| |    
T  27759453 tggatcgatatgcgagtaacgttgctgagatcaactgaagatatcatcaacagcttgattccgccagaagatcgtcattagttagggtaaggtgcatttc 27759552  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| |  |||||| ||||| || | || ||||| ||||||||||||||    
T  27759553 aactacaacaattgtcttacctctgaaatggggtaattcaaacttgccaaacggctatgactcaagcatttcgcccagcgttcatgtttttcctttgaaa 27759652  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  27759653 agattaaatt 27759662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 80 - 232
Target Start/End: Original strand, 1226285 - 1226437
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1226285 tggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 1226384  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacg 232  Q
    |||| |||||||||||||||||| |||||||||||||||||||||| ||||||    
T  1226385 aactacaacaattgtcttacctcataaatggggtaattcaaacttgccaaacg 1226437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 80 - 232
Target Start/End: Complemental strand, 14330775 - 14330623
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  14330775 tggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttaaggtaaggtgcattcc 14330676  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacg 232  Q
    |||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  14330675 aactacaacaattgtcttacctctgaaatggggtaattcaaacttatcaaacg 14330623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 51027848 - 51027639
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| || ||||||||||||||||||||||||| |  |||||||| ||| |||||| |||||||||||||||||||||| |||    
T  51027848 tggatcgatatgcgggtaacgttgttgagatcaactgaagatatcatcaacaacttgattccaccataagatcgtcattagttagggtaaggtgcactcc 51027749  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||| ||||||| ||||||||||||||||||||| ||| ||||||  |||||| ||||| || | |||||||| |||||||||| |||    
T  51027748 aactacaacaattgtcgtacctctgaaatggggtaattcaaacttgccaagcggccatgactcaagcatttcgcccagcattcatgtttttcctttaaaa 51027649  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  51027648 agattaaatt 51027639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 46816604 - 46816396
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||| ||| ||| || ||||||||  ||||||||||||||| || ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  46816604 tggatcgatatgcaggtaacgttgttgagatca--tgaagatatcatcaatagcttgattccgccagaagatcgtcattagttagggcaaggtgcattcc 46816507  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcat-atttttcctttgaa 278  Q
    |||| ||||||||||||||||||| | ||||||||||||||||||| ||||||||||  |||||| ||||| |||||||||||||  ||||| |||||||    
T  46816506 aactacaacaattgtcttacctctgagatggggtaattcaaacttgccaaacggccaagactcaagcatttcgctcggcattcatgtttttttctttgaa 46816407  T
Q  279 aagattaaatt 289  Q
    ||| |||||||    
T  46816406 aaggttaaatt 46816396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 45939651 - 45939861
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||||||| || ||| |||||||||||||||||||||||||||| |  |||||||  ||| |||||| ||||||||||||||||||||||||||    
T  45939651 tggatcgatatgcgagtaacgttgctgagatcaactgaagatatcatcaacaacttgattcttccataagatcgtcattagttagggtaaggtgcattcc 45939750  T
Q  180 aactgcaac-aattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    |||| |||| ||||||||||||||| ||||||||||||||||||||| |||||| |||  |||||| |||||||| |  | ||||| |||||||||||||    
T  45939751 aactacaactaattgtcttacctctgaaatggggtaattcaaacttgccaaacgaccatgactcaagcattttgcccaacgttcatgtttttcctttgaa 45939850  T
Q  279 aagattaaatt 289  Q
    |||||||||||    
T  45939851 aagattaaatt 45939861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 80 - 256
Target Start/End: Complemental strand, 242497 - 242321
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||  ||||||||||||||    
T  242497 tggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaacagcttgattccgccagaagatcgtcattagttaaagtaaggtgcattcc 242398  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcg 256  Q
    ||||  |||||||||||||||||| |||| |||||||||||||||| ||||||| ||| |||||| ||||| |||||    
T  242397 aactataacaattgtcttacctctgaaatagggtaattcaaacttgccaaacgggcaggactcaagcatttcgctcg 242321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 80 - 287
Target Start/End: Complemental strand, 31824710 - 31824503
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||| |||||||||| ||| |||| ||||||||||||||||||||||| || |||||||||| |||||||| ||||||||||||||||||||||||||    
T  31824710 tggatcaatatgcgggtaacgttgcttagatcaactgaagatatcatcaacagcttgattccgctagaagatcgtcattagttagggtaaggtgcattcc 31824611  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||| | | |||| |||||||| ||||||| ||||||||||  |||||| ||||| || |  | ||||| ||||||||||||||    
T  31824610 aactacaacaattgtcttacatttgaaatagggtaatttaaacttgccaaacggccattactcaagcatttcgcccaacgttcatgtttttcctttgaaa 31824511  T
Q  280 agattaaa 287  Q
    ||||||||    
T  31824510 agattaaa 31824503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 21017258 - 21017109
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21017258 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 21017159  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||||||||||| ||| || |||| |||||||||||||||||||||    
T  21017158 aactacaacaattgtctt-cct-ttgaatgaggtaattcaaacttgtcaaac 21017109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 20901749 - 20901592
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||| |  |||||||| || ||||||| ||||||||||||||||||||||||||    
T  20901749 tggatcgatatgcgggtaacactgctgagatcaactgaagatatcatcaacaacttgattccacctgaagatcgtcattagttagggtaaggtgcattcc 20901650  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccag 237  Q
    |||| ||||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  20901649 aactacaacaattgtcttacctctgaaatgaggtaattcaaactttccaaacggccag 20901592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 40353854 - 40353705
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  40353854 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccagaagattgtcattagttagggtaaggtgcattcc 40353755  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||||||||||| ||| || ||||||||||||||||| ||||||||    
T  40353754 aactacaacaattgtctt-cct-ttgaatggggtaattcaaacctgtcaaac 40353705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 55796869 - 55797018
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  55796869 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattcc 55796968  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||||||||||| ||| || |||||| |||||||||||||||||||    
T  55796969 aactacaacaattgtctt-cct-ttgaatgggctaattcaaacttgtcaaac 55797018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 1042875 - 1043083
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||| |  ||||||||||||||||||| ||||||||||||||||||| ||||||    
T  1042875 tggatcgatatgcgggtgacgttgctgagatcaactgaagatataatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtacattcc 1042974  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    |||||||||||||||||||||| || |||| | | ||||||||   | |||||   ||  |||||| ||||| ||||||||||||| |||||||||||||    
T  1042975 aactgcaacaattgtcttacct-ttgaatgagataaattcaaatcggccaaac-aacatgactcaagcatttcgctcggcattcatgtttttcctttgaa 1043072  T
Q  279 aagattaaatt 289  Q
    |||||||||||    
T  1043073 aagattaaatt 1043083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 39589055 - 39589263
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||| |  |||||||||| |||||||| ||||||||| ||||||||||||||||    
T  39589055 tggatcgatatgcggatgacgttgctgagatcaactgaagatatcatcaacaacttgattccgctagaagatcgtcattagttggggtaaggtgcattcc 39589154  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    |||| ||||||||||||||||| || |||| | | ||||||||| || |||||   ||| |||||| |||||  |||||||||||| |||||||||||||    
T  39589155 aacttcaacaattgtcttacct-ttgaatgagataaattcaaacctgccaaac-aacaggactcaagcatttcactcggcattcatgtttttcctttgaa 39589252  T
Q  279 aagattaaatt 289  Q
    |||||||||||    
T  39589253 aagattaaatt 39589263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 80 - 232
Target Start/End: Complemental strand, 32937983 - 32937833
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| || ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||    
T  32937983 tggatcgatatgcgggtaacgttgttgagatcaactgaagatatcatcaaaaatttgattccgccagaagatcgtcattagatagggtaaggtgcattcc 32937884  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacg 232  Q
    |||| ||||||||||||| ||| || |||| ||||||||||||||||||||||    
T  32937883 aactacaacaattgtctt-cct-ttgaatgaggtaattcaaacttgtcaaacg 32937833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 6177396 - 6177247
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  6177396 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattcc 6177297  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||| |||| || ||| || |||| |||||||||||||||||||||    
T  6177296 aactacaacatttgtatt-cct-ttgaatgaggtaattcaaacttgtcaaac 6177247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 41794643 - 41794494
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  41794643 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattcc 41794544  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||| |||| || ||| || |||| |||||||||||||||||||||    
T  41794543 aactacaacatttgtatt-cct-ttgaatgaggtaattcaaacttgtcaaac 41794494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 56139036 - 56139185
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  56139036 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattcc 56139135  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||| |||| || ||| || |||| |||||||||||||||||||||    
T  56139136 aactacaacatttgtatt-cct-ttgaatgaggtaattcaaacttgtcaaac 56139185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 9489804 - 9490012
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||| ||||||||||||||| |  ||||||||||||||||||||||||| |  ||||||||||||||||||| |||||||||||||||| |||||||||    
T  9489804 tggattgatatgcgggtgacgttattgagatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaaagtgcattcc 9489903  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    |||||||||||||||||||||| || |||| | | ||||||||| || |||||   ||| |||||| |||||  |||| ||||||| |||||||||||||    
T  9489904 aactgcaacaattgtcttacct-ttgaatgagataaattcaaacctgccaaac-aacaggactcaagcatttcactcgacattcatgtttttcctttgaa 9490001  T
Q  279 aagattaaatt 289  Q
    || ||||||||    
T  9490002 aaaattaaatt 9490012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 28082364 - 28082571
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||| |||||| ||||| | | || ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  28082364 tggatcaatatgcaggtgaagttacttagatcaactgaagatatcatcaaaaatttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 28082463  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    |||| ||||||||||||| ||| || |||| | | ||||||||| || |||||   ||| |||| | ||||| ||||||||||||| |||||||||||||    
T  28082464 aactacaacaattgtctt-cct-ttgaatgagataaattcaaacctgccaaac-aacaggactcgagcatttcgctcggcattcatgtttttcctttgaa 28082560  T
Q  279 aagattaaatt 289  Q
    |||||||||||    
T  28082561 aagattaaatt 28082571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 49094871 - 49095020
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| |||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  49094871 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcgtcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattcc 49094970  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||| |||| || ||| || |||| |||||||||||||||||||||    
T  49094971 aactacaacatttgtatt-cct-ttgaatgaggtaattcaaacttgtcaaac 49095020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 80 - 197
Target Start/End: Complemental strand, 20778950 - 20778833
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||    
T  20778950 tggatcgatatgcgggtttcgttgctgagatcaactgaagatatcatcaaaagtttgattccgccaaaagatcgtcattaggtagggtaaggtgcattcc 20778851  T
Q  180 aactgcaacaattgtctt 197  Q
    |||  |||||||||||||    
T  20778850 aaccacaacaattgtctt 20778833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 80 - 234
Target Start/End: Original strand, 21169577 - 21169732
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--t 176  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| || || | |  ||||  |    
T  21169577 tggatcgatatgcaggtgacgttgctgagatcaactgaagatatcatcaaaaatttgattccgccagaagatcgtcattaggtacggaatgaatgcacct 21169676  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||| ||||||||||||| ||| || |||||||||||||||||||| ||||||||    
T  21169677 tccaactacaacaattgtctt-cct-ttgaatggggtaattcaaacttgccaaacggc 21169732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 232
Target Start/End: Complemental strand, 43889580 - 43889427
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--t 176  Q
    ||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||  | | |  ||||  |    
T  43889580 tggatcgatatgcgggtgacgttgttgagatcaactgaagatataatcaaaagtttgattccgccagaagatcgtcattaggtaccgaatgaatgcacct 43889481  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacg 232  Q
    ||||||| ||||||||||||| |||| |||||||||||||||||||||| ||||||    
T  43889480 tccaactacaacaattgtctt-cctc-taaatggggtaattcaaacttgccaaacg 43889427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 80 - 234
Target Start/End: Complemental strand, 47657436 - 47657281
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttaggg---taaggtgcat 176  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||  |    || |  |||    
T  47657436 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccaccagaagatcgtcattaggtatcgaatgaatgcacat 47657337  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||| || ||||||||||||| ||| || |||| ||||||||||||||||||||||||    
T  47657336 tccagctacaacaattgtctt-cct-ttgaatgaggtaattcaaacttgtcaaacggc 47657281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 80 - 234
Target Start/End: Complemental strand, 957536 - 957381
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--t 176  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| || || | |  ||||  |    
T  957536 tggatcgatatgcgggtgacgttgctgagatcaactaaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatgaatgcacct 957437  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||| || ||||||||||||| ||| || |||||||||||| ||||||| ||||||||    
T  957436 tccagctacaacaattgtctt-cct-ttgaatggggtaattgaaacttgccaaacggc 957381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 80 - 234
Target Start/End: Complemental strand, 49423839 - 49423683
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--t 176  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||| |||||| ||||||| || || | |  ||||  |    
T  49423839 tggatcgatatgcgggtgacgttgctgagatcaactgaagaaatcatcaaaagtttgattctgccataagatcgtcattaggtacggaatgaatgcacct 49423740  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||| || |||||||||| |||||| || |||||||||||||||| ||||||||||||    
T  49423739 tccagctacaacaattgtgttacct-ttgaatggggtaattcaaatttgtcaaacggc 49423683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 22437037 - 22437117
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  22437037 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccggaagatcgtcattag 22437117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 34529877 - 34529797
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34529877 tggatcgatatgcaggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 34529797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 17211392 - 17211542
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| |||||||||||||| ||||||| ||||| ||| |||||||||||||||||| | ||||| ||||| || |    ||||    
T  17211392 tggatcgatatgcgggtaacgttgctgagatcaactaaagatattatcaacagtctgattccgccagaagatcgtgattaggtagggaaatgcatcttcc 17211491  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| |||||||||||||| |||| ||||| |||||||||||||||| ||||    
T  17211492 aactacaacaattgtctta-ctctgaaatgaggtaattcaaacttgttaaac 17211542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 80 - 234
Target Start/End: Original strand, 18412721 - 18412873
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||||||| || ||| ||||||||||||||||| |||| ||||| | |||||||| ||||||||||| | ||||| ||||| || |  | ||||    
T  18412721 tggatcgatatgcgtgtaacgttgctgagatcaactgaatatattatcaacaatttgattctgccagaagatcgtgattaggtaggg-aatgcaccttcc 18412819  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||| |||||||||||||| |||| |||||||||||||||||||||| |||||||    
T  18412820 aactacaacaattgtctta-ctctgaaatggggtaattcaaacttgttaaacggc 18412873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 80 - 163
Target Start/End: Complemental strand, 6282404 - 6282321
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagtta 163  Q
    ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  6282404 tggatcgatatgcgggtgaagttgctaagatcaactgaagatatcatcaaaagtttgattctgccagaagatcgtcattagtta 6282321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 80 - 224
Target Start/End: Original strand, 24606878 - 24607020
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||| |||||| |||| ||| |||||||||||||||||||||| ||||| ||| |||||||||||||||||| | ||||| ||||  || || ||||||    
T  24606878 tggattgatatgtgggtaacgttgctgagatcaactgaagatattatcaagagtctgattccgccagaagatcgtgattaggtaggtaaatgtacattcc 24606977  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaactt 224  Q
    |||| ||||||||||||| ||| || |||| ||||||||||||||    
T  24606978 aactacaacaattgtctt-cct-ttgaatgaggtaattcaaactt 24607020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 80 - 234
Target Start/End: Complemental strand, 36776600 - 36776445
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--t 176  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||   |||||| ||||||| ||  | | |  ||||  |    
T  36776600 tggatcgatatgcgggtgacgttgttgagatcaactgaagatatcatcaaaagtttgattccgctgaaagatcgtcattaggtaccgaatgaatgcacct 36776501  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||| || ||||||||||||| ||| || |||||||||||||||||||| ||||||||    
T  36776500 tccagctacaacaattgtctt-cct-ttgaatggggtaattcaaacttgccaaacggc 36776445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 80 - 234
Target Start/End: Complemental strand, 49792017 - 49791862
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--t 176  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||||||||| |  |||||||||||| |||||||||||||| || || | |  ||||  |    
T  49792017 tggatcgatatgcaggtaacgttgctgagatcaactgaagatatcatcaacaacttgattccgccaaaagatcatcattaggtacggaatgaatgcacct 49791918  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |  | || ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  49791917 tttagctacaacaattgtctt-cct-ttaaatggggtaattcaaacttgtcaaacggc 49791862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 49817725 - 49817573
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttaggg---taaggtgcat 176  Q
    ||||||||||||||||| ||| |||||||||||||||||||||| ||||| ||| |||||||||||||||||| ||||||| || ||    || || | |    
T  49817725 tggatcgatatgcgggtaacgttgctgagatcaactgaagatattatcaacagtctgattccgccagaagatcgtcattaggtacggaatgaatgtacct 49817626  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    | ||||| |||||||||||||  |  || |||||||||||||||||||| |||||    
T  49817625 ttcaactacaacaattgtctt--catttgaatggggtaattcaaacttgccaaac 49817573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 42886392 - 42886472
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    |||||||||| |||||| ||| |||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||    
T  42886392 tggatcgatacgcgggtaacgttgctgagatcaactgaagatattatcaacagtctgattccgccagaagatcatcattag 42886472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 86 - 234
Target Start/End: Complemental strand, 44560255 - 44560106
Alignment:
Q  86 gatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--ttccaac 182  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||  |||||| ||||||| || || | |  ||||  ||||| |    
T  44560255 gatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgatttctccttaagatcgtcattaggtacggaatgaatgcaccttccagc 44560156  T
Q  183 tgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    | ||||||||||||| ||| || |||||||||||||||||||| ||||||||    
T  44560155 tacaacaattgtctt-cct-ttgaatggggtaattcaaacttgccaaacggc 44560106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 34153367 - 34153288
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcatta 159  Q
    |||||| |||||||| ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  34153367 tggatcaatatgcggatgacgttggtgagatcaactgaagatatcatcaaaagtttgattctgccagaagatcgtcatta 34153288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 80 - 225
Target Start/End: Original strand, 31324300 - 31324444
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||||| | || | | ||||||||||||||||||| ||  |||| ||||||||||||| |||||||||| ||||| ||||| || |  | ||||    
T  31324300 tggatcgatatgtgtgtaaagttgctgagatcaactgaagacattctcaacagtttgattccgctagaagatcatgattaggtaggg-aatgcaccttcc 31324398  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttg 225  Q
    |||| ||||||||||||||||| | ||||| | |||||||||||||    
T  31324399 aactacaacaattgtcttacctttgaaatgagataattcaaacttg 31324444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 3393430 - 3393577
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||||||  || ||| |||||||||||||||||||||| ||||| ||| |||||||||||||||||||| ||||| ||||| || |  | ||||    
T  3393430 tggatcgatatgcatgtaacgttgctgagatcaactgaagatattatcaacagtctgattccgccagaagatcatgattaggtaggg-aatgcaccttcc 3393528  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||| |||| ||||| || |||||||  ||||||||||||| ||||    
T  3393529 aactacaacatttgtattacc-ctgaaatggg--aattcaaacttgttaaac 3393577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 26591766 - 26591686
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||| ||| |||| ||||||||||||||||||||||| |  ||||||||||||||||||| |||||||    
T  26591766 tggatcgatatgcgggtaacgttgctaagatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattag 26591686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 4785503 - 4785423
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||  ||| |||||| ||||||||||||||| ||||| ||||||||||||||| |||||| |||||||    
T  4785503 tggatcgatatgcggggaacgttgctgatatcaactgaagatattatcaacagtttgattccgccacaagatcgtcattag 4785423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 289
Target Start/End: Complemental strand, 37866955 - 37866839
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||   ||| ||||| ||||||  | ||||||||||  |||    
T  37866955 gtgcattccaactgcaacaattgtcttacct-ttgaatggggtcaattcaaacttgtcaaac-aacaggactcagacatttcacccggcattcat-gttt 37866859  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||||| ||||||    
T  37866858 tcctttgaaaagaataaatt 37866839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 234
Target Start/End: Original strand, 2773135 - 2773290
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--t 176  Q
    ||||||||||||||||| ||| |  |||||||||||||||||| |||||| |  ||||||||||||||||||| |||| || || || | |  ||||  |    
T  2773135 tggatcgatatgcgggtaacgttattgagatcaactgaagataccatcaacaacttgattccgccagaagatcgtcatcaggtacggaatgaatgcacct 2773234  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |  | || ||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  2773235 tttagctacaacaattgtctt-cct-ttgaatggggtaattcaaacttgtcaaacggc 2773290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 282
Target Start/End: Complemental strand, 25763147 - 25763037
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||| ||||||||||||||||| |  |||||||| || |||||||||||||||  | || |||||| ||||| || | |||||||| ||||    
T  25763147 gtgcattccaactccaacaattgtcttacct-tcgaatggggtaaagtcaaacttgtcaaacaacaag-actcaagcatttcgccccgcattcatgtttt 25763050  T
Q  270 tcctttgaaaaga 282  Q
    |||||||||||||    
T  25763049 tcctttgaaaaga 25763037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 289
Target Start/End: Complemental strand, 39589476 - 39589360
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||| ||||||||||||||||| || |||||||| |||||||||||| |||||  | || ||||||||||||  | || |||||||  |||    
T  39589476 gtgcattccaacttcaacaattgtcttacct-ttgaatggggtcaattcaaacttgccaaacaacaag-actcaaacatttcacacgacattcat-gttt 39589380  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||||| ||||||    
T  39589379 tcctttgaaaagaataaatt 39589360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 102 - 208
Target Start/End: Original strand, 13850897 - 13851002
Alignment:
Q  102 tgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaacaattgtcttacct 201  Q
    |||||||||||||| |||||||  |||| |||||||||||||||||||| | | ||||| ||||| || |  | |||||||| |||||||| ||||||||    
T  13850897 tgctgagatcaactaaagatattctcaacagtttgattccgccagaagaccgtgattaggtaggg-aatgcaccttccaactacaacaattatcttacct 13850995  T
Q  202 cttaaat 208  Q
    || ||||    
T  13850996 ctaaaat 13851002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 102 - 208
Target Start/End: Original strand, 13866411 - 13866516
Alignment:
Q  102 tgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaacaattgtcttacct 201  Q
    ||||||||||||||||||||||  |||| |||||||||||||||||||| | | ||||| ||||| || |  | || ||||| ||||||||||| |||||    
T  13866411 tgctgagatcaactgaagatattctcaacagtttgattccgccagaagaccgtgattaggtaggg-aatgcacctttcaactacaacaattgtcatacct 13866509  T
Q  202 cttaaat 208  Q
    || ||||    
T  13866510 ctgaaat 13866516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 203
Target Start/End: Original strand, 17292114 - 17292210
Alignment:
Q  106 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaacaattgtcttacctct 203  Q
    ||||||||||||||||||  |||| |||||||||||||||||||||| | ||||  ||||| || |  | |||||||| |||||||||| ||||||||    
T  17292114 gagatcaactgaagatattctcaacagtttgattccgccagaagatcgtgattatgtaggg-aatgcaccttccaactacaacaattgttttacctct 17292210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 232
Target Start/End: Complemental strand, 49817278 - 49817130
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||||||| || ||| || ||||||||| ||||||||| ||||| ||| |||||| |||| |||||| | ||||| ||||| || |  | ||||    
T  49817278 tggatcgatatgcgtgtaacgttgatgagatcaaatgaagatattatcaacagtctgattctgccaaaagatcgtgattaggtaggg-aatgcaccttcc 49817180  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacg 232  Q
    |||| ||| |||||||||||| || ||||  || ||||||||||||| |||||    
T  49817179 aactacaataattgtcttacc-ctgaaat--ggaaattcaaacttgttaaacg 49817130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 289
Target Start/End: Complemental strand, 1043296 - 1043180
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||||||||||||||||||||| || |||| | | ||||||||| ||||||||   ||| ||||||  |||| ||||| |||||||  |||    
T  1043296 gtgcattccaactgcaacaattgtcttacct-ttgaatgagataaattcaaacctgtcaaac-aacaggactcaagaatttcgctcgacattcat-gttt 1043200  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||||| ||||||    
T  1043199 tcctttgaaaagaataaatt 1043180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 289
Target Start/End: Complemental strand, 27759876 - 27759759
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggtaa-ttcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||| || |||||||||||||| || |||||||||| |||||||| | |||||  | || |||||| ||||| || | || ||||| ||||    
T  27759876 gtgcattccaactacagcaattgtcttacct-ttgaatggggtaaattcaaactggccaaacaac-aggactcaagcatttcgccccgcgttcatgtttt 27759779  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||||| ||||||    
T  27759778 tcctttgaaaagaataaatt 27759759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 2773563 - 2773623
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaa 239  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||||| ||||||| ||||    
T  2773563 tccaactgcaacaattgtctt-cctctgaa-tggggtaattcaaacttgttaaacggcaagaa 2773623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 289
Target Start/End: Original strand, 20901335 - 20901451
Alignment:
Q  172 tgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatattttt 270  Q
    |||||||||||| ||||||||||||||||| || |||||||| |||||||||||| |||||   ||  |||||| ||||| |  | |||||||| |||||    
T  20901335 tgcattccaactacaacaattgtcttacct-ttgaatggggtaaattcaaacttgccaaac-aacatgactcaagcatttcgtcccgcattcatgttttt 20901432  T
Q  271 cctttgaaaagattaaatt 289  Q
    |||||||||| | ||||||    
T  20901433 cctttgaaaataataaatt 20901451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 49791589 - 49791534
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||||||| |||||||    
T  49791589 tccaactgcaacaattgtctt-cct-ttgaatggggtaattcaaacttgttaaacggc 49791534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 200
Target Start/End: Original strand, 10312398 - 10312517
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| || | ||||||||||||||||| ||||| | | | |||||||  ||||||| | ||||| ||||| ||    | ||||    
T  10312398 tggatcgatatgcgggtaacgttgttaagatcaactgaagatattatcaacaatctaattccgctggaagatcgtgattaggtaggg-aattcaccttcc 10312496  T
Q  180 aactgcaacaattgtcttacc 200  Q
    |||| ||||||||||||||||    
T  10312497 aactacaacaattgtcttacc 10312517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 11288421 - 11288469
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatca 128  Q
    |||||||||||||| || ||| |||||||||||||||||||||| ||||    
T  11288421 tggatcgatatgcgagtaacgttgctgagatcaactgaagatattatca 11288469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 43888922 - 43888977
Alignment:
Q  176 ttccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaac 231  Q
    ||||||||||||||||| ||||||||| |||||||||| ||||||||||||| ||||    
T  43888922 ttccaactgcaacaattatcttacctc-taaatggggtaaattcaaacttgttaaac 43888977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 242633 - 242598
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  242633 cagagacacaaggagggtggaacacgttcggtataa 242598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 4785639 - 4785604
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  4785639 cagagacacaaggagggtggaacacattcggtataa 4785604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 22436901 - 22436936
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  22436901 cagagacacaaggagggtggaacacgttcggtataa 22436936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 34153503 - 34153468
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  34153503 cagagacacaaggagggtggaacacgttcggtataa 34153468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 34530013 - 34529978
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||| |||||||||||||||||||||||    
T  34530013 cagagacacaagaagggtggaacaccttcggtataa 34529978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 43889716 - 43889681
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  43889716 cagagacacaaggagggtggaacacgttcggtataa 43889681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 49792153 - 49792118
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  49792153 cagagacacaaggagggtggaacacgttcggtataa 49792118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 51428409 - 51428374
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  51428409 cagagacacaaggagggtggaacacgttcggtataa 51428374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 46
Target Start/End: Complemental strand, 14330910 - 14330876
Alignment:
Q  12 agagacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||||||||||||||| ||||||||||    
T  14330910 agagacacaaggagggtggaacactttcggtataa 14330876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 17211829 - 17211783
Alignment:
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttg 225  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  17211829 aactacaacaattgtcttacctctgaaatggggtaaattcaaacttg 17211783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 44559939 - 44559887
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  44559939 tccaactgcaacaattgtctt-cct-ttgaatggggtaattcaaacttgttaaac 44559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 957108 - 957053
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||||||||||||||| | ||| || ||||||||||||||||||||| |||||||    
T  957108 tccaactgcaacaattgtcat-cct-ttgaatggggtaattcaaacttgttaaacggc 957053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 9489671 - 9489704
Alignment:
Q  13 gagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||||| ||||||    
T  9489671 gagacacaaggagggtggaacaccttcagtataa 9489704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 25762590 - 25762623
Alignment:
Q  13 gagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||| ||||||||||    
T  25762590 gagacacaaggagggtggaacacattcggtataa 25762623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 36776172 - 36776117
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||||||| |||||||||||| ||| || ||||||||||||||||||||| |||||||    
T  36776172 tccaactgaaacaattgtctt-cct-ttgaatggggtaattcaaacttgttaaacggc 36776117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 32938116 - 32938084
Alignment:
Q  14 agacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||||||||||||| ||||||||||    
T  32938116 agacacaaggagggtggaacacgttcggtataa 32938084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 39588922 - 39588954
Alignment:
Q  14 agacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||||||||||||||||| ||||||    
T  39588922 agacacaaggagggtggaacaccttcagtataa 39588954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 49064584 - 49064638
Alignment:
Q  176 ttccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacg 232  Q
    |||||||||||||||||||||| ||| || |||| |||||||||||||||| |||||    
T  49064584 ttccaactgcaacaattgtctt-cct-ttgaatgaggtaattcaaacttgttaaacg 49064638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 156; Significance: 7e-83; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 86 - 289
Target Start/End: Original strand, 16581960 - 16582163
Alignment:
Q  86 gatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgc 185  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  16581960 gatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagcttgattccgctagaagatcttcattagttagggtaaggtgcattccaactgc 16582059  T
Q  186 aacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaaagatta 285  Q
    |||||||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||  |||| ||||||||||||| ||||||||||||||||||||    
T  16582060 aacaattggcttacctctgaaatggggtaattcaaacttgccaaacggccaggactcaagtatttcgctcggcattcatgtttttcctttgaaaagatta 16582159  T
Q  286 aatt 289  Q
    ||||    
T  16582160 aatt 16582163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 82 - 289
Target Start/End: Complemental strand, 42241173 - 42240966
Alignment:
Q  82 gatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaa 181  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||| |||||| ||||||||||||||||||||||||||||    
T  42241173 gatcgatatgcgggtgacgttgctgagatcaactgaagatatcaccaaaagtttgattctgccataagatcgtcattagttagggtaaggtgcattccaa 42241074  T
Q  182 ctgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaaag 281  Q
    || ||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||||| ||||||||||||| ||||| ||||||||||    
T  42241073 ctacaacaattgtcttacctctgaaatgaggtaattcaaacttgtcaaacggccaggactcaagcatttcgctcggcattcatgttttttctttgaaaag 42240974  T
Q  282 attaaatt 289  Q
    ||||||||    
T  42240973 attaaatt 42240966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 12968378 - 12968169
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| |  |||||||| |||||||||| |||||||||||||||||||||| |||    
T  12968378 tggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaacaacttgattcctccagaagatcgtcattagttagggtaaggtgcactcc 12968279  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| |||||| |||  |||||| ||||| || | || ||||| ||||||||||||||    
T  12968278 aactacaacaattgtcttacctctgaaatggggtaattcaaacttgccaaacgaccatgactcaagcatttcgcccagcgttcatgtttttcctttgaaa 12968179  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  12968178 agattaaatt 12968169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 29906712 - 29906921
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| ||||||||||||||||| |||||||||| |  ||||||| |||||||||||| |||||||||||||||||||||||||    
T  29906712 tggatcgatatgcgggtaacgttgctgagatcaactgaaaatatcatcaacaacttgattctgccagaagatcagcattagttagggtaaggtgcattcc 29906811  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| |||||| |||||||||||| ||||||||||||||||||||| ||||||||||  |||||| ||||| || | || ||||| ||||||||||||||    
T  29906812 aactacaacaactgtcttacctctgaaatggggtaattcaaacttgccaaacggccatgactcaagcatttcgcccagcgttcatgtttttcctttgaaa 29906911  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  29906912 agattaaatt 29906921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 80 - 291
Target Start/End: Original strand, 32734777 - 32734988
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| || ||| ||||||||||||||||||||| || |||||||||||| |||||  |||||||||| |||||||||||||||    
T  32734777 tggatcgatatgcgggtaacgttgttgatatcaactgaagatatcatcaacagcttgattccgccaaaagatagtcattagttaaggtaaggtgcattcc 32734876  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||  ||||||||||| ||||||| ||||||||||||| ||||||||||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  32734877 aactacaacaacagtcttacctctaaaatgggataattcaaacttgccaaacggccaggactcaagcatttcgctcggcattcatgtttttcctttgaaa 32734976  T
Q  280 agattaaattat 291  Q
    | ||||||||||    
T  32734977 atattaaattat 32734988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 10360275 - 10360067
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| | | |||||||||||||||||||| ||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||    
T  10360275 tggatcgatatgcgggtaatgttgctgagatcaactgaagatttcatcaacagcttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 10360176  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||| ||||||||||  |||||| ||||| || |  | ||||| ||||||||||||||    
T  10360175 aactacaacaattgtcttacctc-aaaatggggtaattcaaacttgccaaacggccatgactcaagcatttcgcccaacgttcatgtttttcctttgaaa 10360077  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  10360076 agattaaatt 10360067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 42120142 - 42120351
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||| |||||| |||| ||| |||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||    
T  42120142 tggattgatatgtgggtaacgttgctgagatcaactgaagatatcatcaacagcttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 42120241  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| |||| |||||||||||||| |||||||||||||||||||||||||||| |||  | |||| ||||| || | || ||||| ||||| ||||||||    
T  42120242 aactacaacgattgtcttacctctgaaatggggtaattcaaacttgtcaaacgaccatgaatcaagcatttcgcccagcgttcatgttttttctttgaaa 42120341  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  42120342 agattaaatt 42120351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 87 - 289
Target Start/End: Original strand, 18393486 - 18393689
Alignment:
Q  87 atatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgca 186  Q
    ||||||| || ||| ||||||||||||||||||||||||| || |  ||||||| ||||||||||| |||||||| ||||||||||||||||||||| ||    
T  18393486 atatgcgtgtaacgttgctgagatcaactgaagatatcataaacaacttgattctgccagaagatcgtcattagtgagggtaaggtgcattccaactaca 18393585  T
Q  187 acaattgtcttacctcttaaat-ggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaaagatta 285  Q
    | ||||||||||||||| |||| ||||||||||||||||| |||||| | || ||||||  |||| ||||||||||||| ||||||||||||||||||||    
T  18393586 aaaattgtcttacctctgaaatnggggtaattcaaacttgccaaacgactaggactcaagtatttcgctcggcattcatgtttttcctttgaaaagatta 18393685  T
Q  286 aatt 289  Q
    ||||    
T  18393686 aatt 18393689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 22493401 - 22493610
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||| ||||||||||| ||| | |||||||||||| ||||||||||||| |  ||||||||||||||||||| ||||||||||||||||| ||||||||    
T  22493401 tggattgatatgcgggtaacgttcctgagatcaactaaagatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaagatgcattcc 22493500  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| |||||| |||||||| ||| ||||||||||||||||||||| ||||||||||  |||||  ||||| || | || ||||| ||||||||||||||    
T  22493501 aactacaacaactgtcttacttctgaaatggggtaattcaaacttgccaaacggccatgactcaggcatttcgcccagcgttcatgtttttcctttgaaa 22493600  T
Q  280 agattaaatt 289  Q
    | ||||||||    
T  22493601 atattaaatt 22493610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 29067859 - 29068008
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29067859 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 29067958  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    | || ||||||||||||| ||| || ||||||||||||||||||||||||||    
T  29067959 agctacaacaattgtctt-cct-ttgaatggggtaattcaaacttgtcaaac 29068008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 39394021 - 39394230
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| || |  ||||||||| ||||||||| |||||||||||| |||||||||||||    
T  39394021 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcattaacaacttgattccgtcagaagatcgtcattagttaggataaggtgcattcc 39394120  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacatttt-gctcggcattcatatttttcctttga 277  Q
    |||||||||||||||||||||| || |||| | | ||||||||| ||||||||   ||  |||||| |||||| |||| |||||||| ||||||||||||    
T  39394121 aactgcaacaattgtcttacct-ttgaatgagataaattcaaacatgtcaaac-aacatgactcaagcattttcgctcagcattcatgtttttcctttga 39394218  T
Q  278 aaagattaaatt 289  Q
    ||||||||||||    
T  39394219 aaagattaaatt 39394230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 3937140 - 3936991
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  3937140 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattcc 3937041  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| |||||||||| || ||| || |||| |||||||||||||||||||||    
T  3937040 aactacaacaattgtatt-cct-ttgaatgaggtaattcaaacttgtcaaac 3936991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 80 - 199
Target Start/End: Original strand, 5420599 - 5420718
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||    
T  5420599 tggatcgatatgcgggtgacgttgctgatatcaactgaagatatcatcaaaagtttgattccacctgaagatcgtcattagttagggtaaggtgcattcc 5420698  T
Q  180 aactgcaacaattgtcttac 199  Q
    ||||||||||||||||||||    
T  5420699 aactgcaacaattgtcttac 5420718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 17424919 - 17425068
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  17424919 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattcc 17425018  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||| ||||||| ||| || |||| |||||||||||||||||||||    
T  17425019 aactacaacatttgtctt-cct-ttgaatgaggtaattcaaacttgtcaaac 17425068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 43982986 - 43983135
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  43982986 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattcc 43983085  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| |||||||||| || ||| || |||| |||||||||||||||||||||    
T  43983086 aactacaacaattgtatt-cct-ttgaatgaggtaattcaaacttgtcaaac 43983135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 80 - 199
Target Start/End: Original strand, 3941867 - 3941986
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||| |  ||||||||||||||||||| ||||||||||||||||||||||||||    
T  3941867 tggatcgatatgcgggtgacgttgatgagatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 3941966  T
Q  180 aactgcaacaattgtcttac 199  Q
    |||| |||||||||||||||    
T  3941967 aacttcaacaattgtcttac 3941986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 22001964 - 22002113
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| ||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||  ||||| ||||||||    
T  22001964 tggatcgatatgcgggtgaagttgcttagatcaacttaagatatcatcaaaagtttgattccgccagaagattgtcattagttattgtaagttgcattcc 22002063  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||||||||||| ||| || |||| |||||||||||||||||||||    
T  22002064 aactacaacaattgtctt-cct-ttgaatgaggtaattcaaacttgtcaaac 22002113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 80 - 234
Target Start/End: Original strand, 35491765 - 35491920
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--t 176  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || | |  ||||  |    
T  35491765 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatgaatgcacct 35491864  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||| || ||||||||||||| ||| || |||||||||||||||||||| ||||||||    
T  35491865 tccagctacaacaattgtctt-cct-ttgaatggggtaattcaaacttgccaaacggc 35491920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 80 - 232
Target Start/End: Complemental strand, 17796183 - 17796033
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||| |||||| || ||||||| ||||| || |||  ||||    
T  17796183 tggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaaaagtttggttccgtcagaagctcgtcattaggtagggaaatgtgtcttcc 17796084  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacg 232  Q
    |||| ||||||||||||| ||| || |||| ||||||||||||||| ||||||    
T  17796083 aactacaacaattgtctt-cct-ttgaatgaggtaattcaaacttgccaaacg 17796033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 80 - 232
Target Start/End: Original strand, 29111288 - 29111438
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| ||||||||||||| |||||||||||||||| ||| |||||||||||| | | ||| ||| |||||||| |||||||||    
T  29111288 tggatcgatatgcgggtaacgttgctgagatcaaccgaagatatcatcaaaaatttaattccgccagaataacgtcactaggtagggtaaagtgcattcc 29111387  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacg 232  Q
    |||| |||||||| |||| ||| || |||| ||||||||||||||||||||||    
T  29111388 aactacaacaattatctt-cct-ttgaatgtggtaattcaaacttgtcaaacg 29111438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 80 - 234
Target Start/End: Original strand, 6976966 - 6977121
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--t 176  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||  | | |  ||||  |    
T  6976966 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgcgagaagatcgtcattaggtaccgaatgaatgcacct 6977065  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||| || ||||||||||||| |||| | |||||||||||||||||||| ||||||||    
T  6977066 tccagctacaacaattgtctt-cctc-tgaatggggtaattcaaacttgccaaacggc 6977121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 80 - 233
Target Start/End: Complemental strand, 10364713 - 10364560
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagg--gtaaggtgcatt 177  Q
    ||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||  ||||    || |  | ||    
T  10364713 tggatcgatatgcgggtgatgttgctgagatcaattgaagatatcatcaaaagtttgattccgccagaagatcgtcattacgtaggaatgaatgcacctt 10364614  T
Q  178 ccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacgg 233  Q
    ||| || ||||||||||||| ||| ||||||||||||||||||||||| |||||||    
T  10364613 ccagctacaacaattgtctt-cct-ttaaatggggtaattcaaacttgccaaacgg 10364560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 27130585 - 27130505
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  27130585 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatagtcattag 27130505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 37312571 - 37312491
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  37312571 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattctgccagaagatcgtcattag 37312491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 40677451 - 40677371
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  40677451 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgctagaagatcgtcattag 40677371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 41499170 - 41499090
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41499170 tggatcgatatgagggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 41499090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 19471707 - 19471559
Alignment:
Q  83 atcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--ttcc 179  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || | |  ||||  ||||    
T  19471707 atcgatatgcgggtgacgttgctaagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatgaatgcaccttcc 19471608  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaa 230  Q
    | || ||||||||||||| |||| | ||| |||||||||||||||||||||    
T  19471607 agctacaacaattgtctt-cctc-tgaattgggtaattcaaacttgtcaaa 19471559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 33404145 - 33404349
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| |||||||||||||||||||||| ||||| ||| ||||  |||||||||||| | ||||| ||||| || |  | ||||    
T  33404145 tggatcgatatgcgggtaacgttgctgagatcaactgaagatattatcaacagtctgatgtcgccagaagatcgtgattaggtaggg-aatgcaccttcc 33404243  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||| ||| || |||| |||||||||||||| | |||||| ||| ||||||||| ||||  |||||||  |||| ||||||| |||    
T  33404244 aactacaacaattgtctt-cct-ttgaatgaggtaattcaaactttttaaacgg-caggactcaaaca-tttgtccggcatttctattgttcctttcaaa 33404339  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  33404340 agattaaatt 33404349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 43491602 - 43491735
Alignment:
Q  102 tgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--ttccaactgcaacaattgtctta 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || |||  ||||  |||||||| ||||||||| |||     
T  43491602 tgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaaagaatgcaccttccaactacaacaattgcctt- 43491700  T
Q  199 cctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||| || |||||||||||||||||||| ||||||||    
T  43491701 cct-ttgaatggggtaattcaaacttgccaaacggc 43491735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 2919439 - 2919361
Alignment:
Q  82 gatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||    
T  2919439 gatcgatatgcgggtgacgttgctgagatcaactgaagatatcattaaaagtttgattccgccaaaagatcgtcattag 2919361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 233
Target Start/End: Complemental strand, 34521760 - 34521606
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--t 176  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||  || |||||| ||||||| ||  | | |  ||||  |    
T  34521760 tggatcgatatgcgggtgacgttgttgagatcaactgaagatatcatcaaaagtttgattccctcataagatcgtcattaggtaccgaatgaatgcacct 34521661  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacgg 233  Q
    |||| || ||||||||||||| ||| || |||||||||||||||||||| |||||||    
T  34521660 tccagctacaacaattgtctt-cct-ttgaatggggtaattcaaacttgccaaacgg 34521606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 289
Target Start/End: Complemental strand, 39799886 - 39799738
Alignment:
Q  139 tccgccagaagatcatcattagttagggtaaggtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccag 237  Q
    |||||||||||||| |||||||||||||||| ||||||||||||  ||||||||||||| ||| || |||| | | ||||||||| || |||||   |||    
T  39799886 tccgccagaagatcgtcattagttagggtaatgtgcattccaaccacaacaattgtctt-cct-ttgaatgagataaattcaaacctgccaaac-aacag 39799790  T
Q  238 aactcaaacattttgctcggcattcatatttttcctttgaaaagattaaatt 289  Q
     |||| | ||||| ||||||||||||| ||||||||||||||||||||||||    
T  39799789 gactcgagcatttcgctcggcattcatgtttttcctttgaaaagattaaatt 39799738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 203
Target Start/End: Complemental strand, 27650503 - 27650381
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||   || ||| ||||||||||||||||||||||  |||| |||||||||||||||||||||| | ||||| ||||| || |  | ||||    
T  27650503 tggatcgatatgtttgtcacgttgctgagatcaactgaagatattctcaacagtttgattccgccagaagatcgtgattaggtaggg-aatgcaccttcc 27650405  T
Q  180 aactgcaacaattgtcttacctct 203  Q
    |||| ||||||||| |||||||||    
T  27650404 aactacaacaattgacttacctct 27650381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 16253607 - 16253735
Alignment:
Q  102 tgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaacaattgtcttacct 201  Q
    |||||||||||||| ||||||| ||| | ||||||||||| |||||||||| | ||||| ||||| ||    | |||||||| |||||||||||||| ||    
T  16253607 tgctgagatcaactaaagatattatcgacagtttgattccaccagaagatcgtgattaggtaggg-aatacaccttccaactacaacaattgtctta-ct 16253704  T
Q  202 cttaaatggggtaattcaaacttgtcaaacg 232  Q
    || ||||| |||||||||||||||| |||||    
T  16253705 ctgaaatgaggtaattcaaacttgttaaacg 16253735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 166
Target Start/End: Original strand, 6902099 - 6902182
Alignment:
Q  83 atcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttaggg 166  Q
    ||||||||||| || ||| || ||||||||||||||||||| ||||| ||| ||||||||| |||||||||| ||||| |||||    
T  6902099 atcgatatgcgagtaacgttgttgagatcaactgaagatattatcaacagtctgattccgcgagaagatcatgattaggtaggg 6902182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 208
Target Start/End: Complemental strand, 31991986 - 31991885
Alignment:
Q  106 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaacaattgtcttacctctta 205  Q
    ||||||||||||||||||  |||| | |||||||||||||||||||| | ||||| ||||| || |  | |||||||| ||||||||||||||||||| |    
T  31991986 gagatcaactgaagatattctcaacaatttgattccgccagaagatcgtgattaggtaggg-aatgcaccttccaactacaacaattgtcttacctctga 31991888  T
Q  206 aat 208  Q
    |||    
T  31991887 aat 31991885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 287
Target Start/End: Original strand, 10359854 - 10359968
Alignment:
Q  172 tgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatattttt 270  Q
    |||||||||||| ||||||||||||||||| || |||||||| |||||||||||| |||||   ||  |||||| |||||||| | |||||||| |||||    
T  10359854 tgcattccaactacaacaattgtcttacct-ttgaatggggtaaattcaaacttgccaaac-aacatgactcaagcattttgccccgcattcatgttttt 10359951  T
Q  271 cctttgaaaagattaaa 287  Q
    ||||| |||||| ||||    
T  10359952 cctttaaaaagaataaa 10359968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 166
Target Start/End: Original strand, 20148250 - 20148334
Alignment:
Q  82 gatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttaggg 166  Q
    ||||||||||||||| ||| ||||||||| | ||||||||||  |||| ||| |||||||||||||||||| | ||||| |||||    
T  20148250 gatcgatatgcgggtaacgttgctgagattagctgaagatattttcaacagtctgattccgccagaagatcgtgattaggtaggg 20148334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 289
Target Start/End: Complemental strand, 16582376 - 16582260
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||| ||||||||||||||||| || |||||||| | |||||||||| |||||   ||  ||||||||||||  ||||||||||||  |||    
T  16582376 gtgcattccaactacaacaattgtcttacct-ttgaatggggtcagttcaaacttgccaaac-aacatgactcaaacatttcactcggcattcat-gttt 16582280  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||||| ||||||    
T  16582279 tcctttgaaaagaataaatt 16582260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 106 - 225
Target Start/End: Complemental strand, 15891697 - 15891578
Alignment:
Q  106 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaacaattgtcttacctctta 205  Q
    ||||||||||||||||||  |||| ||||||||||||| |||| ||| | ||||| ||||| || |  | |||||||| ||||||||||| ||| |||||    
T  15891697 gagatcaactgaagatattctcaacagtttgattccgctagaatatcgtgattaggtaggg-aatgcaccttccaactacaacaattgtcatacttctta 15891599  T
Q  206 aatggggt-aattcaaacttg 225  Q
    ||| || | ||||||||||||    
T  15891598 aattggataaattcaaacttg 15891578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 18393898 - 18393842
Alignment:
Q  175 attccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaac 231  Q
    ||||||||| ||||||||||||||||| || |||||||| ||||||||||||||||||    
T  18393898 attccaactacaacaattgtcttacct-ttgaatggggtaaattcaaacttgtcaaac 18393842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 37312143 - 37312088
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||||||||||||||||| || ||||| |||||||||||||||||||||| |||||||    
T  37312143 tccaactgcaacaattgtttt-cctct-aaatggggtaattcaaacttgttaaacggc 37312088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 2919017 - 2918963
Alignment:
Q  178 ccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||||||||||||||||||| ||| || ||||||||||||||||||||| |||||||    
T  2919017 ccaactgcaacaattgtctt-cct-ttgaatggggtaattcaaacttgttaaacggc 2918963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 6977394 - 6977448
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacgg 233  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||||||| ||||||    
T  6977394 tccaactgcaacaattgtctt-cct-ttgaatggggtaattcaaacttgttaaacgg 6977448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 32735191 - 32735139
Alignment:
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaac 231  Q
    |||| ||||||||||||||||||| ||||||||| |||||||||||| |||||    
T  32735191 aactacaacaattgtcttacctctgaaatggggtaaattcaaacttgccaaac 32735139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 3941731 - 3941766
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||||||| ||||||    
T  3941731 cagagacacaaggagggtggaacaccttcagtataa 3941766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 10364849 - 10364814
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  10364849 cagagacacaaggagggtggaacacgttcggtataa 10364814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 16581816 - 16581851
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  16581816 cagagacacaaggagggtggaacacgttcggtataa 16581851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 19471846 - 19471811
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  19471846 cagagacacaaggagggtggaacacgttcggtataa 19471811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 282
Target Start/End: Complemental strand, 22493824 - 22493714
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatattttt 270  Q
    ||||||||||||| ||||||||||||||||| || ||||||  |||||||||||| |||     ||  |||||| ||||| || | |||||||| |||||    
T  22493824 gtgcattccaactacaacaattgtcttacct-ttgaatgggaaaattcaaacttgccaacacaacatgactcaagcatttcgccccgcattcatgttttt 22493726  T
Q  271 cctttgaaaaga 282  Q
    | ||||||||||    
T  22493725 catttgaaaaga 22493714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 35491629 - 35491664
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  35491629 cagagacacaaggagggtggaacacgttcggtataa 35491664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 39393885 - 39393920
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||| ||||||||||||||||    
T  39393885 cagagacacaaggagggtgtaacaccttcggtataa 39393920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 289
Target Start/End: Complemental strand, 42120565 - 42120448
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatgggg-taattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||| ||||||||||||||||| || |||||||  |||||||||||| |||||   ||  |||||| ||||   | | |||||||| ||||    
T  42120565 gtgcattccaactacaacaattgtcttacct-ttgaatggggaaaattcaaacttgccaaac-aacatgactcaagcattgcaccccgcattcatgtttt 42120468  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||||| ||||||    
T  42120467 tcctttgaaaagaataaatt 42120448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 10364282 - 10364230
Alignment:
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||| |||||||    
T  10364282 aactgcaacaattgtctttc-tct-aaatggggtaattcaaacttgttaaacggc 10364230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 34521394 - 34521339
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||||||||||||||||||||  |  || ||||||||||||||||||||| |||||||    
T  34521394 tccaactgcaacaattgtctt--catttgaatggggtaattcaaacttgttaaacggc 34521339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 19471277 - 19471222
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||||||||||||||||| ||||| || ||| ||||||||||||||| |||||||    
T  19471277 tccaactgcaacaattgtctt-cctctgaa-tggagtaattcaaacttgttaaacggc 19471222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 27130719 - 27130686
Alignment:
Q  13 gagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||| ||||||||||    
T  27130719 gagacacaaggagggtggaacacattcggtataa 27130686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 3936719 - 3936668
Alignment:
Q  174 cattccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgt 226  Q
    ||||||||||||||||||||||||||| ||   |||||| |||||||||||||    
T  3936719 cattccaactgcaacaattgtcttacc-ctgcgatggggcaattcaaacttgt 3936668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 150; Significance: 3e-79; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 43693273 - 43693482
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |  |||||||| |||||||||| ||||||||||||||||||||||||||    
T  43693273 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaacaacttgattcctccagaagatcgtcattagttagggtaaggtgcattcc 43693372  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| |||||||| |||||||||| ||||||||||||||||||||| |||||||| || |||||| ||||| ||||||||||||| ||||||||||||||    
T  43693373 aactacaacaattttcttacctctgaaatggggtaattcaaacttgccaaacggcaaggactcaagcatttcgctcggcattcatgtttttcctttgaaa 43693472  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  43693473 agattaaatt 43693482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 86 - 289
Target Start/End: Original strand, 40414752 - 40414953
Alignment:
Q  86 gatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgc 185  Q
    ||||||||||||||| |||||||||||||||||||||||||||| || |||||||| |||||||||| |||||||  ||||||||||||||||||||| |    
T  40414752 gatatgcgggtgacgttgctgagatcaactgaagatatcatcaacagcttgattccaccagaagatcgtcattag--agggtaaggtgcattccaactac 40414849  T
Q  186 aacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaaagatta 285  Q
    ||||||| |||||||||| |||||||||||||||||||| |||||||||||| |||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  40414850 aacaattctcttacctctgaaatggggtaattcaaacttatcaaacggccaggactcaagcatttcgctcggcattcatgtttttcctttgaaaagatta 40414949  T
Q  286 aatt 289  Q
    ||||    
T  40414950 aatt 40414953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 38034003 - 38033794
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| || ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  38034003 tggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaatagcttgattccgccggaagatcgtcattagttagggtaaggtgcattcc 38033904  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||| |||| ||||||||||||||||  |||||||||  |||||| ||||| || | || ||||| ||||||||||||||    
T  38033903 aactacaacaattgtcttacctctgaaattgggtaattcaaacttgataaacggccatgactcaagcatttcgcccagcgttcatgtttttcctttgaaa 38033804  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  38033803 agattaaatt 38033794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 83 - 286
Target Start/End: Complemental strand, 43638752 - 43638549
Alignment:
Q  83 atcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaac 182  Q
    ||||||||||| || ||| |||||||||||||||||||||||||||| |  |||||| |||||||||||| |||||||||||||||||||||||||||||    
T  43638752 atcgatatgcgcgtaacgttgctgagatcaactgaagatatcatcaacaacttgatttcgccagaagatcgtcattagttagggtaaggtgcattccaac 43638653  T
Q  183 tgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaaaga 282  Q
    | ||| ||||||||||||||| ||||||||||||||||||||| ||||  ||||| |||||| ||||| ||||||||||||| |||||||||||||||||    
T  43638652 tacaataattgtcttacctctgaaatggggtaattcaaacttgccaaatagccaggactcaagcatttcgctcggcattcatgtttttcctttgaaaaga 43638553  T
Q  283 ttaa 286  Q
    ||||    
T  43638552 ttaa 43638549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 40415393 - 40415602
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||| ||||||| || ||||||||||| ||||||||||||| || ||||||||| ||||||||| |||||||||||||||||||||||| |    
T  40415393 tggatcgatatgcaggtgacgttgttgagatcaacttaagatatcatcaacagcttgattccgtcagaagatcgtcattagttagggtaaggtgcatttc 40415492  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| |||||||| |||||||| | ||||||||||||||||||||  |||||||||| |||| || ||||| ||||||||||||| ||||||||||||||    
T  40415493 aactacaacaattctcttacctatgaaatggggtaattcaaacttaccaaacggccataacttaagcatttcgctcggcattcatgtttttcctttgaaa 40415592  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  40415593 agattaaatt 40415602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 42169038 - 42168829
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| ||| |||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||| |||| ||||||||    
T  42169038 tggatcgatatgcgggtaacgttgcagagatcaactgaagatatcatcaacagcttgattccgccagaagatcgtcattagttaggataagatgcattcc 42168939  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||| | ||||||||||||||||||||| ||||||||||  |||||| ||||| || | || ||||| ||||||||||||||    
T  42168938 aactacaacaattgtcttacctttgaaatggggtaattcaaacttgccaaacggccatgactcaagcatttcgcccagcgttcatgtttttcctttgaaa 42168839  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  42168838 agattaaatt 42168829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 80 - 277
Target Start/End: Complemental strand, 33799629 - 33799432
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||||||| |  ||||||||||||||||||| ||||||||||||||||||||||||||    
T  33799629 tggatcgatatgcggataacgttgctgagatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 33799530  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttga 277  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||| ||||| || | || ||||| ||||||| ||||    
T  33799529 aactacaacaattgtcttacctctgaaatggggtaattcaaacttgccaaacggccatgactcaagcatttcgcccagcgttcatgtttttccattga 33799432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 34615089 - 34615298
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||| ||||||||||| ||| |||||||||||||||||||||||||||| |  |||||||| |||||||||  | ||||||||||||||||||||||||    
T  34615089 tggattgatatgcgggtaacgttgctgagatcaactgaagatatcatcaacaacttgattccaccagaagatagtaattagttagggtaaggtgcattcc 34615188  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||  |||||| ||||| || |  | ||||| |||||| |||||||    
T  34615189 aactacaacaattgtcttacctcttaaatggggtaattcaaacttgacaaacgaccatgactcaagcatttcgcccaacgttcatgtttttcatttgaaa 34615288  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  34615289 agattaaatt 34615298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 80 - 291
Target Start/End: Complemental strand, 28706220 - 28706009
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||||||| || ||| || |||||||||||||||||||||||||  | ||||||||||||||||||  ||||||||||||||||||||||||||    
T  28706220 tggatcgatatgcgtgtaacgttgttgagatcaactgaagatatcatcaaccgcttgattccgccagaagattgtcattagttagggtaaggtgcattcc 28706121  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||| | | ||||||||||||||||||||| |||||||| |  |||||| ||||| || |  | ||||| ||||||||||||||    
T  28706120 aactacaacaattgtcttacttgtgaaatggggtaattcaaacttgccaaacggcaatgactcaagcatttcgcccaacgttcatgtttttcctttgaaa 28706021  T
Q  280 agattaaattat 291  Q
    ||||||||||||    
T  28706020 agattaaattat 28706009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 15032402 - 15032253
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15032402 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 15032303  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||| ||||||| ||| || ||||||||||||||||||||||||||    
T  15032302 aactacaacatttgtctt-cct-ttgaatggggtaattcaaacttgtcaaac 15032253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 26452461 - 26452669
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |  |||||||||| |||||||| |||||||||||||||||||| |||||    
T  26452461 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaacaacttgattccgctagaagatcgtcattagttagggtaaggtgtattcc 26452560  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    |||||||||||||||| ||||| || |||| | | ||||||||| || |||||   ||| |||||||||||| ||||| |||| || |||||||||||||    
T  26452561 aactgcaacaattgtcatacct-ttgaatgagataaattcaaacctgccaaac-aacaggactcaaacatttcgctcgacatttatgtttttcctttgaa 26452658  T
Q  279 aagattaaatt 289  Q
    |||||||||||    
T  26452659 aagattaaatt 26452669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 24861479 - 24861687
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||| ||||||||||||| | |||||||||||||||||||||||||||| |  ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  24861479 tggattgatatgcgggtgatgttgctgagatcaactgaagatatcatcaacaacttgattctgccagaagatcgtcattagttagggtaaggtgcattcc 24861578  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    | |||||||||||||||||||| || |||| | | ||||||||| || |||||   ||  |||||| ||||| ||||||||||||| |||||||||||||    
T  24861579 atctgcaacaattgtcttacct-ttgaatgagataaattcaaacctgccaaac-aacatgactcaagcatttcgctcggcattcatgtttttcctttgaa 24861676  T
Q  279 aagattaaatt 289  Q
    |||||||||||    
T  24861677 aagattaaatt 24861687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 485336 - 485187
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||| ||| | |||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  485336 tggatcgatatgcggatgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattcc 485237  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| |||||||||| || ||| || |||| |||||||||||||||||||||    
T  485236 aactacaacaattgtatt-cct-ttgaatgaggtaattcaaacttgtcaaac 485187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 82 - 289
Target Start/End: Original strand, 2417053 - 2417258
Alignment:
Q  82 gatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaa 181  Q
    ||||||||||| ||||||| || |||||||||| |||||||||||||| |  |||||||| |||||||||| ||||||||||||||||||||||||||||    
T  2417053 gatcgatatgcaggtgacgttgatgagatcaaccgaagatatcatcaacaacttgattccaccagaagatcgtcattagttagggtaaggtgcattccaa 2417152  T
Q  182 ctgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaaag 281  Q
    || ||||||||||||||||| || |||| | ||| | |||| || |||||    || |||||| ||||| ||||||||||||| ||||||||||||||||    
T  2417153 cttcaacaattgtcttacct-ttgaatgagataaattaaacctgccaaac-aataggactcaagcatttcgctcggcattcatgtttttcctttgaaaag 2417250  T
Q  282 attaaatt 289  Q
    ||||||||    
T  2417251 attaaatt 2417258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 80 - 199
Target Start/End: Original strand, 41275530 - 41275649
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |  ||||||||||||||||||| ||||||||||||||||||||||||||    
T  41275530 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 41275629  T
Q  180 aactgcaacaattgtcttac 199  Q
    |||||||| |||||||||||    
T  41275630 aactgcaataattgtcttac 41275649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 94 - 289
Target Start/End: Original strand, 22549232 - 22549423
Alignment:
Q  94 ggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaacaattg 193  Q
    ||||||| |||||| |||||||||||||||||||||    ||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||    
T  22549232 ggtgacgttgctgacatcaactgaagatatcatcaac---ttgattccgccagaagatcgtcattagttagggtaaggtgtattccaacttcaacaattg 22549328  T
Q  194 tcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaaagattaaatt 289  Q
    |||||||| || |||| | | ||||||||| || |||||   ||| |||||| ||||| |||| |||||||| ||||||||||||||||||||||||    
T  22549329 tcttacct-ttgaatgagataaattcaaacctgccaaac-aacaggactcaagcatttcgctcagcattcatgtttttcctttgaaaagattaaatt 22549423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 80 - 197
Target Start/End: Original strand, 41363792 - 41363909
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| |  |||||||| |||||||||| ||||||||||||||||||||||||||    
T  41363792 tggatcgatatgcgggttacgttgctgagatcaactgaagatatcatcaacaacttgattcctccagaagatcgtcattagttagggtaaggtgcattcc 41363891  T
Q  180 aactgcaacaattgtctt 197  Q
    |||| |||||||||||||    
T  41363892 aactacaacaattgtctt 41363909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 41857052 - 41856972
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41857052 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 41856972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 31171894 - 31171744
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||||| |||||||| ||||||||||||||||| |||| ||||| |||||||||||||||||||||| | ||||| || || || |  | ||||    
T  31171894 tggatcgatatgtgggtgacgttgctgagatcaactgaaaatattatcaacagtttgattccgccagaagatcgtgattaggtatgg-aatgcaccttcc 31171796  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||||||||||||||||| ||||| | |||||||||||||| ||||    
T  31171795 aactacaacaattgtcttacctctgaaatgagataattcaaacttgttaaac 31171744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 44943159 - 44943079
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  44943159 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagattgtcattag 44943079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 18440373 - 18440293
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    |||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||| ||| |||||||| |||||||    
T  18440373 tggatcgatatgagggtgacgttgctgagataaactgaagatatcatcaaaagtttgattacgcgagaagatcgtcattag 18440293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 40702496 - 40702568
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatc 152  Q
    ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  40702496 tggatcgatatgcggatgacgttgctgagatcaactgaatatatcatcaaaagtttgattccgccaaaagatc 40702568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 42603590 - 42603670
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||||||    
T  42603590 tggatcgatatgcgggtgacgttgctgaaatcaaccgaatatatcatcaaaagtttgattccgccaaaagatcgtcattag 42603670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 289
Target Start/End: Complemental strand, 22549636 - 22549520
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||| | ||| ||||||||||||  | ||||||||||  |||    
T  22549636 gtgcattccaactgcaacaattgtcttacct-ttaaatggggtcaattcaaacttgccaaacag-caggactcaaacatttcacccggcattcat-gttt 22549540  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||||| ||||||    
T  22549539 tcctttgaaaagaataaatt 22549520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 140
Target Start/End: Complemental strand, 19242240 - 19242180
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattc 140  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  19242240 tggatcgatatgcgggtgacgttgctaagatcaactgaagatatcatcaaaagtttgattc 19242180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 140
Target Start/End: Complemental strand, 19315424 - 19315364
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattc 140  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  19315424 tggatcgatatgcgggtgacgttgctaagatcaactgaagatatcatcaaaagtttgattc 19315364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 80 - 225
Target Start/End: Complemental strand, 3589344 - 3589198
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||||||| || ||  || |||||||||||||||| || ||||| |||||||||||||||||||||| | ||||| ||||| || |  | |||     
T  3589344 tggatcgatatgcgtgtaacattgttgagatcaactgaagacattatcaacagtttgattccgccagaagatcgtgattaggtaggg-aatgcaccttca 3589246  T
Q  180 aactgcaacaattgtcttac--ctcttaaatggggtaattcaaacttg 225  Q
    |||| |||||||||||||||  |||| ||||| | |||||||||||||    
T  3589245 aactacaacaattgtcttacctctctgaaatgagataattcaaacttg 3589198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 26452325 - 26452360
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||||||||||||||    
T  26452325 cagagacacaaggagggtggaacaccttcggtataa 26452360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 41275394 - 41275429
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||||||||||||||    
T  41275394 cagagacacaaggagggtggaacaccttcggtataa 41275429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 289
Target Start/End: Complemental strand, 44050997 - 44050881
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||||| ||||||||||||||| || |||| | | ||||||||| ||||||||  | || |||||| ||||| ||||| |||||||  |||    
T  44050997 gtgcattccaactgccacaattgtcttacct-ttgaatgagataaattcaaacctgtcaaacaacaag-actcaagcatttcgctcgacattcat-gttt 44050901  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||||| ||||||    
T  44050900 tcctttgaaaagaataaatt 44050881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 46
Target Start/End: Original strand, 24861344 - 24861378
Alignment:
Q  12 agagacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||||||||||||||||||||||||||    
T  24861344 agagacacaaggagggtggaacaccttcggtataa 24861378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 2417530 - 2417588
Alignment:
Q  174 cattccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||||||||||||||||||||||| |||| | ||||||| ||||||||||||| |||||||    
T  2417530 cattccaactgcaacaattgtctt-cctc-tgaatggggcaattcaaacttgttaaacggc 2417588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 2416915 - 2416950
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    |||| |||||||||||||||||||||||||||||||    
T  2416915 cagaaacacaaggagggtggaacaccttcggtataa 2416950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 2417530 - 2417433
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||||| ||||||||||||||| || |||| | | |||| |||||||||||||   ||| |||||| ||||| ||||| ||||||||||||    
T  2417530 gtgcattccaactgccacaattgtcttacct-ttgaatgagataaattaaaacttgtcaaac-aacaggactcaagcatttcgctcgacattcatatttt 2417433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 18440509 - 18440474
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  18440509 cagagacacaaggagggtggaacacgttcggtataa 18440474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 289
Target Start/End: Original strand, 28705805 - 28705914
Alignment:
Q  179 caactgcaacaattgtcttacctcttaaatggggtaa-ttcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttga 277  Q
    ||||| ||||||||||||||||| || ||||||| || ||||||||||||||||  | || |||||| ||||| || |  ||||| | ||||||||||||    
T  28705805 caactacaacaattgtcttacct-ttgaatggggaaaattcaaacttgtcaaacaac-aggactcaagcatttcgccccacattcgtgtttttcctttga 28705902  T
Q  278 aaagattaaatt 289  Q
    ||||| ||||||    
T  28705903 aaagaataaatt 28705914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 40415257 - 40415292
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  40415257 cagagacacaaggagggtggaacacgttcggtataa 40415292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 289
Target Start/End: Original strand, 42168615 - 42168732
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggta-attcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||| ||||||||||| ||||| |  ||||||||| | ||||||||| |||||   ||| |||||| ||||| || | |||||||| ||||    
T  42168615 gtgcattccaactacaacaattgtcctacct-tcgaatggggtacagtcaaacttgccaaac-aacaggactcaagcatttcgccccgcattcatgtttt 42168712  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||| | ||||||    
T  42168713 tcctttgaaaataataaatt 42168732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 43693137 - 43693172
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  43693137 cagagacacaaggagggtggaacacgttcggtataa 43693172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 46
Target Start/End: Complemental strand, 19242375 - 19242341
Alignment:
Q  12 agagacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||||||||||||||| ||||||||||    
T  19242375 agagacacaaggagggtggaacacgttcggtataa 19242341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 46
Target Start/End: Complemental strand, 19315559 - 19315525
Alignment:
Q  12 agagacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||||||||||||||| ||||||||||    
T  19315559 agagacacaaggagggtggaacacgttcggtataa 19315525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 206
Target Start/End: Complemental strand, 26452881 - 26452847
Alignment:
Q  172 tgcattccaactgcaacaattgtcttacctcttaa 206  Q
    |||||||||||||||||||||||||||||| ||||    
T  26452881 tgcattccaactgcaacaattgtcttaccttttaa 26452847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 34614955 - 34614988
Alignment:
Q  13 gagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||| ||||||||||    
T  34614955 gagacacaaggagggtggaacacgttcggtataa 34614988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 41856622 - 41856567
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||||||||||||||||| |||  | ||||||||||||||||||||| |||||||    
T  41856622 tccaactgcaacaattgtctt-cct-atgaatggggtaattcaaacttgttaaacggc 41856567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 26484580 - 26484612
Alignment:
Q  14 agacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||||||||||||| ||||||||||    
T  26484580 agacacaaggagggtggaacacgttcggtataa 26484612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 38034136 - 38034104
Alignment:
Q  14 agacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||||||||||||| ||||||||||    
T  38034136 agacacaaggagggtggaacacgttcggtataa 38034104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 41363658 - 41363690
Alignment:
Q  13 gagacacaaggagggtggaacaccttcggtata 45  Q
    ||||||||||||||||||||||| |||||||||    
T  41363658 gagacacaaggagggtggaacacgttcggtata 41363690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 146; Significance: 7e-77; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 1918 - 2126
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||    
T  1918 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgatttcgccataagatcgtcattagttagggtaaggtgcattcc 2017  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    ||||||||||||| |||||||||| || |||||||||||||||||||||||||||||  |||||| ||||| || | || ||||| ||||||||||||||    
T  2018 aactgcaacaattctcttacctctgaattggggtaattcaaacttgtcaaacggccatgactcaagcatttcgc-cagcgttcatgtttttcctttgaaa 2116  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  2117 agattaaatt 2126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 146; Significance: 7e-77; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 34140993 - 34141201
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||    
T  34140993 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgatttcgccataagatcgtcattagttagggtaaggtgcattcc 34141092  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    ||||||||||||| |||||||||| || |||||||||||||||||||||||||||||  |||||| ||||| || | || ||||| ||||||||||||||    
T  34141093 aactgcaacaattctcttacctctgaattggggtaattcaaacttgtcaaacggccatgactcaagcatttcgc-cagcgttcatgtttttcctttgaaa 34141191  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  34141192 agattaaatt 34141201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 39477319 - 39477110
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||| || |  ||||||||||||||||||| ||||||||||||||||||||||||||    
T  39477319 tggatcgatatgcgggtgacgttgctgagatcaactaaagatatcattaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 39477220  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| |||||||| ||||||| || ||||||||||||||||||||| ||||||||||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  39477219 aactacaacaattatcttaccgctgaaatggggtaattcaaacttgccaaacggccaggactcaagcatttcgctcggcattcatgtttttcctttgaaa 39477120  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  39477119 agattaaatt 39477110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 18237692 - 18237901
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||| ||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18237692 tggatcggtatgcgggtaacgttgctgagatcaactgaagatatcatcaacagtttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 18237791  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||| || |||||||| ||||||||| ||||||||||  |||||| ||||| || |  | |||||||||||||||| |||    
T  18237792 aactacaacaattgtcttacctctgaattggggtaactcaaacttgccaaacggccatgactcaagcatttggcccatcgttcatatttttcctttcaaa 18237891  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  18237892 agattaaatt 18237901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 17183340 - 17183552
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatc---attagttagggtaaggtgcat 176  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||   |||||||||||| ||||||||    
T  17183340 tggatcgatatgcgggtgatgttgctgagatcaactgaagatatcatcaaaagtttgattctgccagaagatcatcgtcattagttagggtgaggtgcat 17183439  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttg 276  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||| ||||| |  | |  ||||| |||||||||||    
T  17183440 tccaactgcaacaattgtcttacctctgaaatggggtaattcaaacttgccaaacggccatgactcaagcatttcgtccagtgttcatgtttttcctttg 17183539  T
Q  277 aaaagattaaatt 289  Q
    |||| ||||||||    
T  17183540 aaaatattaaatt 17183552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 80 - 250
Target Start/End: Complemental strand, 2206116 - 2205946
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||| |||||||||||||    
T  2206116 tggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaacagcttgattccgccagaagatcgtcattagttaggataaggtgcattcc 2206017  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattt 250  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||  |||||| |||||    
T  2206016 aactacaacaattgtcttacctctgaaatggggtaattcaaacttgtcaaacgaccatgactcaagcattt 2205946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 41217742 - 41217950
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| |  |||||||| |||||||||| ||||||||||||||||||||||||||    
T  41217742 tggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaacaacttgattccaccagaagatcgtcattagttagggtaaggtgcattcc 41217841  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| || |||||||||||||||| | ||||||||||||||||||  |||| |||| | |||||| ||||| |||| ||||||||  |||||||||||||    
T  41217842 aactacagcaattgtcttacctctgatatggggtaattcaaacttaccaaagggcctggactcaagcatttcgctcagcattcat-gttttcctttgaaa 41217940  T
Q  280 agattaaatt 289  Q
    ||| ||||||    
T  41217941 agaataaatt 41217950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 48220823 - 48220614
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||| |||||| ||||||| |||||||||||||||||||||||||||| || |||||||| ||| |||||| ||||||||||||||||||||||||||    
T  48220823 tggatcaatatgcaggtgacggtgctgagatcaactgaagatatcatcaacagcttgattccaccataagatcgtcattagttagggtaaggtgcattcc 48220724  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| |||||||| ||||| |||| ||||||| ||||||||||||||||||||||||  |||||| ||||| |  |  | ||||| ||||||||||||||    
T  48220723 aactacaacaattatcttagctctgaaatgggctaattcaaacttgtcaaacggccatgactcaagcatttcgtccaacgttcatgtttttcctttgaaa 48220624  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  48220623 agattaaatt 48220614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 40588677 - 40588885
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| || ||||||||||||||||||||||||| |  ||||||| ||||||||||| |||||||| |||||||||||||||||    
T  40588677 tggatcgatatgcgggtaacgttgttgagatcaactgaagatatcatcaacaacttgattcggccagaagatcgtcattagtcagggtaaggtgcattcc 40588776  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    |||||||||||||||||||||| || |||| | | ||||||||| || |||||   ||| |||||| ||||| |||||||||||||||||||||||||||    
T  40588777 aactgcaacaattgtcttacct-ttgaatgagataaattcaaacctgccaaac-aacaggactcaagcatttcgctcggcattcatatttttcctttgaa 40588874  T
Q  279 aagattaaatt 289  Q
    |||||||||||    
T  40588875 aagattaaatt 40588885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 105 - 289
Target Start/End: Complemental strand, 26601832 - 26601650
Alignment:
Q  105 tgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaacaattgtcttacctctt 204  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||     
T  26601832 tgagatcaactgaagatatcatcaatagtttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattatcttacctctg 26601733  T
Q  205 aaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaaagattaaatt 289  Q
    ||||||||||||||||||||||||||||   ||  ||| |||| || || |  ||||||| ||||||||||||||||||||||||    
T  26601732 aaatggggtaattcaaacttgtcaaacgaaaagtcctc-aaca-ttcgcccaacattcatgtttttcctttgaaaagattaaatt 26601650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 102 - 289
Target Start/End: Complemental strand, 45363309 - 45363123
Alignment:
Q  102 tgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaacaattgtcttacct 201  Q
    |||||||||||||||||||||||||||| |  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  45363309 tgctgagatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactgcaacaattgtcttacct 45363210  T
Q  202 cttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaaagattaaatt 289  Q
     || |||| | | ||||||||| ||||||||   ||| |||||| ||||| ||||||||||||| ||||||||||||||||||| ||||    
T  45363209 -ttgaatgagataaattcaaacctgtcaaac-aacaggactcaagcatttcgctcggcattcatgtttttcctttgaaaagattgaatt 45363123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 30360645 - 30360851
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||| |||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  30360645 tggattgatatgcgggtg-cgttgctgagatcaactgaagatatcataaaaagtttgattccgccagaagatcgtcattagttagggtaatgtgcattcc 30360743  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    ||||  ||| |||||||||| ||| |||| |||||||||||||||| |||||| | ||  ||| |||| || || |  ||||||| ||||||||||||||    
T  30360744 aactataactattgtcttacatctgaaattgggtaattcaaacttgccaaacgacaagtcctc-aaca-ttcgcccaacattcatgtttttcctttgaaa 30360841  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  30360842 agattaaatt 30360851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 9367199 - 9367050
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  9367199 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattcc 9367100  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| |||||||||| || ||| || |||| |||||||||||||||||||||    
T  9367099 aactacaacaattgtatt-cct-ttgaatgaggtaattcaaacttgtcaaac 9367050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 17839451 - 17839659
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgcc-agaagatcatcattagttagggtaaggtgcattc 178  Q
    ||||||||||||||||||| | |||| ||||||| |||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||    
T  17839451 tggatcgatatgcgggtgaagttgcttagatcaattgaagatatcatcaaaagtttgattccgccaaaaagatcgtcattagttagggtaaggtgcattc 17839550  T
Q  179 caactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttga 277  Q
    ||||| ||||||||||||| ||| || |||| | | ||||||||| || |||||   ||| |||| | ||||| ||||||||||||| ||||||||||||    
T  17839551 caactacaacaattgtctt-cct-ttgaatgagataaattcaaacctgccaaac-aacaggactcgagcatttcgctcggcattcatgtttttcctttga 17839647  T
Q  278 aaagattaaatt 289  Q
    ||||||||||||    
T  17839648 aaagattaaatt 17839659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 20564887 - 20565036
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  20564887 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattcc 20564986  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||| |||| || ||| || |||| |||||||||||||||||||||    
T  20564987 aactacaacatttgtatt-cct-ttgaatgaggtaattcaaacttgtcaaac 20565036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 13920434 - 13920583
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||| ||||| | |||| ||||||||||||||||||||||||| ||||||| ||||| |||||| ||||||||||||||||| ||||||||    
T  13920434 tggatcgatatgcaggtgaagttgcttagatcaactgaagatatcatcaaaaatttgatttcgccataagatcgtcattagttagggtaagatgcattcc 13920533  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||||||||||| ||| || ||||||||||||||||||||||||||    
T  13920534 aactacaacaattgtctt-cct-ttgaatggggtaattcaaacttgtcaaac 13920583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 10523197 - 10523346
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | | || |||||||||||| ||||||||||||||||||||||||| ||| ||| |||||||||||||||||||| |||||    
T  10523197 tggatcgatatgcgggtgaagtttcttagatcaactgaatatatcatcaaaagtttgattccgcctgaaaatcgtcattagttagggtaaggtgtattcc 10523296  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||||||||||| ||| || |||| |||||||||||||||||||||    
T  10523297 aactacaacaattgtctt-cct-ttgaatgtggtaattcaaacttgtcaaac 10523346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 88 - 228
Target Start/End: Complemental strand, 17320272 - 17320134
Alignment:
Q  88 tatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaa 187  Q
    ||||||| ||| | |||| ||||||||| |||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||||||||||| |||    
T  17320272 tatgcggttgaagttgcttagatcaacttaagatatcatcaaaagtttgattctgccataaaatcgtcattagttagggtaaggtgcattccaactacaa 17320173  T
Q  188 caattgtcttacctcttaaatggggtaattcaaacttgtca 228  Q
    |||||||||| ||| ||||||||||||||||||||||||||    
T  17320172 caattgtctt-cct-ttaaatggggtaattcaaacttgtca 17320134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 80 - 232
Target Start/End: Original strand, 47269026 - 47269178
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| ||||||||| |||| || |||||||||| | ||||||||||||| |||||| |||||| |||||||||| ||||||||    
T  47269026 tggatcgatatgcgggtaacgttgctgagattaactaaaaatatcatcaacaatttgattccgccaaaagatcgtcattaattagggtaagatgcattcc 47269125  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacg 232  Q
    |||| ||||||||  ||||||| | ||||||||||||||||||||| ||||||    
T  47269126 aactacaacaattagcttacctgtgaaatggggtaattcaaacttgccaaacg 47269178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 146 - 264
Target Start/End: Complemental strand, 28979065 - 28978947
Alignment:
Q  146 gaagatcatcattagttagggtaaggtgcattccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaa 245  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| ||| ||     
T  28979065 gaagatcgtcattagttagggtaaggtgcattccaactgcaacaattgtcttacctctgaaatggggtaattcaaacttgccaaacagccaggactaaag 28978966  T
Q  246 cattttgctcggcattcat 264  Q
    ||||| ||||| |||||||    
T  28978965 catttcgctcgacattcat 28978947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 86 - 226
Target Start/End: Complemental strand, 20378776 - 20378638
Alignment:
Q  86 gatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgc 185  Q
    ||||||||||||| | |||||||||||||||||||||| || || |  ||||||||||||||||||||||||||||||| |||||||||||||||||| |    
T  20378776 gatatgcgggtgatgttgctgagatcaactgaagatataattaacaacttgattccgccagaagatcatcattagttagagtaaggtgcattccaactac 20378677  T
Q  186 aacaattgtcttacctcttaaatggggtaattcaaacttgt 226  Q
    |||||||||||| |||| |  |||||| |||||||||||||    
T  20378676 aacaattgtctt-cctc-tggatggggcaattcaaacttgt 20378638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 41048911 - 41048991
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41048911 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 41048991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 234
Target Start/End: Original strand, 48270776 - 48270931
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttaggg---taaggtgcat 176  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| || ||    || |  |||    
T  48270776 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcgttaggtacggaatgaatgcacat 48270875  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||| ||||||||||||| |   || |||||||||||||||||||| || |||||    
T  48270876 tccaactacaacaattgtctttc--ttttaatggggtaattcaaacttgccagacggc 48270931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 21187378 - 21187298
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  21187378 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgtcagaagatcgtcattag 21187298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 36393903 - 36393823
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  36393903 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccataagatcttcattag 36393823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 34139332 - 34139411
Alignment:
Q  118 agatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaacaattgtctt 197  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  34139332 agatatcatcaaaagtttgattctgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtctt 34139411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 48315257 - 48315179
Alignment:
Q  82 gatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  48315257 gatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccataagatcgtcattag 48315179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 42735393 - 42735470
Alignment:
Q  83 atcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  42735393 atcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgcaagaagatcgtcattag 42735470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 232
Target Start/End: Complemental strand, 21614839 - 21614689
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||| || | ||||| ||||| || |  | || |    
T  21614839 tggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaaaattttgattccgccagaagttcgtgattaggtagggaaatgcacctttc 21614740  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacg 232  Q
    |||| ||||||||||||| ||| || |||| ||||||||||| || |||||||    
T  21614739 aactacaacaattgtctt-cct-ttgaatgaggtaattcaaaattatcaaacg 21614689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 80 - 232
Target Start/End: Complemental strand, 1642666 - 1642518
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||||||| || ||| || ||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||| ||||| || |  | ||||    
T  1642666 tggatcgatatgcgtgtaacgttgttgagatcaactgaagatattatcaacagtttgattccgccagaagatcgtgattaggtaggg-aatgcaccttcc 1642568  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacg 232  Q
    |||| ||||||||||||||||| | |||||||  ||||||||||||| |||||    
T  1642567 aactacaacaattgtcttacct-tgaaatggg--aattcaaacttgttaaacg 1642518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 234
Target Start/End: Complemental strand, 46862273 - 46862118
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--t 176  Q
    |||||||||||||| |||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||| |||| || || || | |  ||||  |    
T  46862273 tggatcgatatgcgagtgacgttgctgagattaactgaagatatgatcaaaagtttgattccgccagaagatcgtcataaggtacggaatgaatgcacct 46862174  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||  | |||||||||||||  || || |||||||||||||||||||| ||||||||    
T  46862173 tccagatacaacaattgtctt--cttttgaatggggtaattcaaacttgccaaacggc 46862118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 80 - 163
Target Start/End: Original strand, 21650652 - 21650735
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagtta 163  Q
    |||||||||||| |||| ||| |||||||||||||||||||||| ||||| ||| ||||||||||| |||||||||||||||||    
T  21650652 tggatcgatatgtgggtaacgttgctgagatcaactgaagatattatcaacagtctgattccgccataagatcatcattagtta 21650735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 210
Target Start/End: Original strand, 2356417 - 2356547
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||||||| || ||| || ||||||||||||||||||||||||||| ||||||||||| | |||| | | ||||| ||||| || |    ||||    
T  2356417 tggatcgatatgcgagtaacgttgttgagatcaactgaagatatcatcaaaaatttgattccgctataagaccgtgattaggtagggaaatgcatcttcc 2356516  T
Q  180 aactgcaacaattgtcttacctcttaaatgg 210  Q
    |||| ||||||||||||||||||| ||||||    
T  2356517 aactacaacaattgtcttacctctgaaatgg 2356547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 15337984 - 15337904
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||| ||| |||||||||||||||||||||| || || ||| |||||||||||||||||| |||||||    
T  15337984 tggatcgatatgcgggtaacgttgctgagatcaactgaagatattataaacagtctgattccgccagaagatcgtcattag 15337904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 30354894 - 30354814
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    |||||||||||| || ||||| ||||||||||| ||||||||||||||||||||||||||| |||| |||||| |||||||    
T  30354894 tggatcgatatgtggatgacgttgctgagatcagctgaagatatcatcaaaagtttgattctgccaaaagatcgtcattag 30354814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 43351178 - 43351099
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||| || ||||||| |||||||||| |||||||    
T  43351178 tggatcgatatg-gggtgacgttgctgagatcaactgaagatatcatcaaatgtctgattccaccagaagatcgtcattag 43351099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 140
Target Start/End: Complemental strand, 28114472 - 28114412
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattc 140  Q
    |||||||| ||| |||||||| |||||||||||||||||||||||||||||| ||||||||    
T  28114472 tggatcgaaatgtgggtgacgttgctgagatcaactgaagatatcatcaaaaatttgattc 28114412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 171 - 289
Target Start/End: Original strand, 45362910 - 45363026
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    |||||||| |||||||||||||||||||||| ||||||| | | ||||||||||||| ||||   ||| |||||||||||| ||||| |||||||  |||    
T  45362910 gtgcattctaactgcaacaattgtcttacct-ttaaatgagataaattcaaacttgttaaac-aacaggactcaaacatttcgctcgacattcat-gttt 45363006  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||||| ||||||    
T  45363007 tcctttgaaaagaataaatt 45363026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 280
Target Start/End: Complemental strand, 17183766 - 17183658
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||| ||||||||||||||||| || |||||||| |||||||||||| |||||   ||| |||||| ||||||||   |||||||| ||||    
T  17183766 gtgcattccaactacaacaattgtcttacct-ttgaatggggtaaattcaaacttgccaaac-aacaggactcaagcattttgcctcgcattcatgtttt 17183669  T
Q  270 tcctttgaaaa 280  Q
    |||||||||||    
T  17183668 tcctttgaaaa 17183658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 21614448 - 21614370
Alignment:
Q  168 aaggtgcattccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacatt 249  Q
    ||||||| |||||||| ||||||||||||| ||||| | |||||||||||||||||||| ||||||| || |||||||||||    
T  21614448 aaggtgccttccaactacaacaattgtctt-cctct-agatggggtaattcaaacttgttaaacggcaag-actcaaacatt 21614370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 121
Target Start/End: Complemental strand, 28979101 - 28979060
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagat 121  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  28979101 tggatcgatatgcgggtgacgttgctgagatcaactgaagat 28979060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 28978872 - 28978932
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    ||||||||||||| ||||||||||||||||| | || ||||  ||||||||||||||||||    
T  28978872 gtgcattccaactccaacaattgtcttacctttgaattgggtcaattcaaacttgtcaaac 28978932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 34157099 - 34157142
Alignment:
Q  246 cattttgctcggcattcatatttttcctttgaaaagattaaatt 289  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  34157099 catttcgctcggcattcatgtttttcctttgaaaagattaaatt 34157142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 208
Target Start/End: Complemental strand, 3380727 - 3380626
Alignment:
Q  106 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaacaattgtcttacctctta 205  Q
    ||||||||||||||||||  |||| | |||||||| ||||||||||| | ||||| ||||| || |  | |||||||  ||||||||||||||||||| |    
T  3380727 gagatcaactgaagatattctcaacaatttgattctgccagaagatcgtgattaggtaggg-aatgcaccttccaacgacaacaattgtcttacctctga 3380629  T
Q  206 aat 208  Q
    |||    
T  3380628 aat 3380626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 46
Target Start/End: Original strand, 40588542 - 40588576
Alignment:
Q  12 agagacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||||||||||||||||||||||||||    
T  40588542 agagacacaaggagggtggaacaccttcggtataa 40588576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 20877703 - 20877648
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||||||||| |||||||    
T  20877703 tccaactgcaacaattgtctt-cctct-aaattgggtaattcaaacttgttaaacggc 20877648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 28114044 - 28113997
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgt 226  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  28114044 tccaactgcaacaattgtctt-cctct-aaatggggtaattcaaacttgt 28113997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 36393476 - 36393421
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||||||| |||||||    
T  36393476 tccaactgcaacaattgtctt-cct-ttgaatggggtaattcaaacttgttaaacggc 36393421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 10224623 - 10224677
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacgg 233  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||| |||| ||||||    
T  10224623 tccaactgcaacaattgtctt-cct-ttaaatggggtaattcaaatttgttaaacgg 10224677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 11824847 - 11824907
Alignment:
Q  106 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttaggg 166  Q
    ||||||||||||||||||  |||| ||||||||||||| |||||||| | ||||| |||||    
T  11824847 gagatcaactgaagatattttcaacagtttgattccgctagaagatcgtgattaggtaggg 11824907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 148
Target Start/End: Original strand, 28066383 - 28066451
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaa 148  Q
    ||||||||||||   || ||| ||||||||||  ||||||||||  |||||||||||||||||||||||    
T  28066383 tggatcgatatgtttgtcacgttgctgagatcgtctgaagatattctcaaaagtttgattccgccagaa 28066451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 289
Target Start/End: Complemental strand, 30361064 - 30360949
Alignment:
Q  173 gcattccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcc 272  Q
    ||||||||||| ||||||||||||||||| | || ||||  |||||||| | | |||||   ||| |||||| ||||| || || ||||||| |||||||    
T  30361064 gcattccaactacaacaattgtcttacctttgaattgggtaaattcaaattcgccaaac-aacaggactcaagcatttcgcccgacattcatgtttttcc 30360966  T
Q  273 tttgaaaagattaaatt 289  Q
    | |||||||| ||||||    
T  30360965 tatgaaaagaataaatt 30360949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 15338120 - 15338085
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  15338120 cagagacacaaggagggtggaacacgttcggtataa 15338085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 289
Target Start/End: Original strand, 26601435 - 26601552
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||| | ||||||||||||||||| || |||||||| |||||||||||| |||||   ||| |||||| |  || || | |||||||| ||||    
T  26601435 gtgcattccaagtacaacaattgtcttacct-tttaatggggtaaattcaaacttgccaaac-aacaggactcaagcggttcgccccgcattcatgtttt 26601532  T
Q  270 tcctttgaaaagattaaatt 289  Q
    || |||||||||| ||||||    
T  26601533 tcttttgaaaagaataaatt 26601552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 42682948 - 42682983
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  42682948 cagagacacaaggagggtggaacacgttcggtataa 42682983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 45363458 - 45363423
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||||||| ||||||    
T  45363458 cagagacacaaggagggtggaacaccttcagtataa 45363423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 46
Target Start/End: Original strand, 2356282 - 2356316
Alignment:
Q  12 agagacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||||||||||||||| ||||||||||    
T  2356282 agagacacaaggagggtggaacacgttcggtataa 2356316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 18149681 - 18149727
Alignment:
Q  106 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatc 152  Q
    ||||||||||||||||||  |||| ||||||||| ||||||||||||    
T  18149681 gagatcaactgaagatattctcaacagtttgattgcgccagaagatc 18149727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 280
Target Start/End: Complemental strand, 18238115 - 18238007
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||| ||||||||||||||||| || |||||||| |||||||||| | |||||   ||| |||||| ||||| ||   || ||||| ||||    
T  18238115 gtgcattccaactacaacaattgtcttacct-ttgaatggggtaaattcaaactagccaaac-aacaggactcaagcatttcgcctcgcgttcatgtttt 18238018  T
Q  270 tcctttgaaaa 280  Q
    |||||||||||    
T  18238017 tcctttgaaaa 18238007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 28113813 - 28113862
Alignment:
Q  176 ttccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttg 225  Q
    ||||||||||||||||| ||||||||| |||||||||| ||||||||||||    
T  28113813 ttccaactgcaacaattatcttacctc-taaatggggtaaattcaaacttg 28113862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 283
Target Start/End: Original strand, 39476898 - 39477008
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    |||||||||||||  |||||||||||||||| || ||||  || |||||||||||||||||| | ||| ||| ||||||||  | |||| |||||  |||    
T  39476898 gtgcattccaactataacaattgtcttacct-ttgaatgatgtaaattcaaacttgtcaaacag-caggactaaaacatttcacccggctttcat-gttt 39476994  T
Q  270 tcctttgaaaagat 283  Q
    ||||||||||||||    
T  39476995 tcctttgaaaagat 39477008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 46861856 - 46861904
Alignment:
Q  176 ttccaactgcaacaattgtcttacctcttaaatggggt-aattcaaactt 224  Q
    |||||||||||||||||||||||||| || |||||||| |||||||||||    
T  46861856 ttccaactgcaacaattgtcttacct-ttgaatggggtaaattcaaactt 46861904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 9366778 - 9366727
Alignment:
Q  174 cattccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgt 226  Q
    ||||||||||||||||||||||||||| ||   |||||| |||||||||||||    
T  9366778 cattccaactgcaacaattgtcttacc-ctggtatggggcaattcaaacttgt 9366727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 28979234 - 28979202
Alignment:
Q  14 agacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||||||||||||| ||||||||||    
T  28979234 agacacaaggagggtggaacacgttcggtataa 28979202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 36394036 - 36394004
Alignment:
Q  14 agacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||||||||||||| ||||||||||    
T  36394036 agacacaaggagggtggaacacgttcggtataa 36394004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 42735766 - 42735715
Alignment:
Q  174 cattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttg 225  Q
    ||||||||||||||||||| ||||||| ||| |||||||| ||||||||||||    
T  42735766 cattccaactgcaacaattatcttacc-cttgaatggggtaaattcaaacttg 42735715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 146; Significance: 7e-77; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 84 - 289
Target Start/End: Original strand, 3601470 - 3601675
Alignment:
Q  84 tcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaact 183  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  3601470 tcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgtcagaagatcgtcattagttagagtaaggtgcattccaact 3601569  T
Q  184 gcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaaagat 283  Q
     ||||||||||||||||||| ||||||||||||||||||||| |||| |||||  |||||||||||| || | || ||||| ||||||||||||||||||    
T  3601570 acaacaattgtcttacctctgaaatggggtaattcaaacttgccaaatggccatgactcaaacatttcgcccagcgttcatgtttttcctttgaaaagat 3601669  T
Q  284 taaatt 289  Q
    ||||||    
T  3601670 taaatt 3601675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 7082346 - 7082555
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |  ||||||||||||||||||| |||||||||| |||||||||||||||    
T  7082346 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattagttatggtaaggtgcattcc 7082445  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| |||||||| |||||||||| ||| ||||||||||||||||| |||||||  ||||||||| ||||| ||||||||||||| ||||||||||||||    
T  7082446 aactacaacaattctcttacctctgaaaaggggtaattcaaacttgccaaacggatagaactcaagcatttcgctcggcattcatgtttttcctttgaaa 7082545  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  7082546 agattaaatt 7082555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 1971490 - 1971699
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||| |||||||||| ||| |||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||| |||||||||||||||    
T  1971490 tggatcaatatgcgggtaacgttgctgagatcaactgaagatatcatcaacagcttgattccgccagaaaatcatcattagttatggtaaggtgcattcc 1971589  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||| ||||| ||||||||||||||||||||| |||| |||||  |||||| ||||| || | || ||||| ||||||||||||||    
T  1971590 aactacaacaattgtcttgcctctgaaatggggtaattcaaacttgccaaatggccatgactcaagcatttcgcccagctttcatgtttttcctttgaaa 1971689  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  1971690 agattaaatt 1971699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 19400488 - 19400697
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||| |  ||||||||||||||| ||| ||||||||||||||||||||||||||    
T  19400488 tggatcgatatgcgggtgacgttggtgagatcaactgaagatatcatcaacaacttgattccgccagaatatcgtcattagttagggtaaggtgcattcc 19400587  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||| ||||||||||||||||| ||| |||||| |||  |||||| ||||| || |  |||||||  |||||||||||||    
T  19400588 aactacaacaattgtcttacctctgaaatggggtaattcaaatttgccaaacgaccatgactcaagcatttcgcccaacattcatgattttcctttgaaa 19400687  T
Q  280 agattaaatt 289  Q
    | ||||||||    
T  19400688 atattaaatt 19400697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 105 - 289
Target Start/End: Original strand, 3458940 - 3459124
Alignment:
Q  105 tgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaacaattgtcttacctctt 204  Q
    ||||||||| ||||||||||||||| || |||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||     
T  3458940 tgagatcaattgaagatatcatcaacagcttgattccgctagaagatcgtcattagttagggtaaggtgcattccaactacaacaattgtcttacctctg 3459039  T
Q  205 aaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaaagattaaatt 289  Q
    ||||| ||||||||||||||| |||||| |||  ||||||  |||  || | || ||||||||||||||||||||||||||||||    
T  3459040 aaatgaggtaattcaaacttgccaaacgaccatgactcaagtattaagcccagcgttcatatttttcctttgaaaagattaaatt 3459124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 7311 - 7162
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7311 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 7212  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||||||||||| ||| || |||||||||||||||| |||||||||    
T  7211 aactacaacaattgtctt-cct-ttgaatggggtaattcaaatttgtcaaac 7162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 8576223 - 8576074
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  8576223 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccagaagattgtcattagttagggtaaggtgcattcc 8576124  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||||||||||| ||| || ||||||||||||||||||||||||||    
T  8576123 aactacaacaattgtctt-cct-ttgaatggggtaattcaaacttgtcaaac 8576074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 8538079 - 8538286
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8538079 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 8538178  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    |||| ||||||||||||| ||| || |||| | | ||||||||| || |||||   ||| |||| | ||||| ||||||||||||| |||||||||||||    
T  8538179 aactacaacaattgtctt-cct-ttgaatgagataaattcaaacctgccaaac-aacaggactcgagcatttcgctcggcattcatgtttttcctttgaa 8538275  T
Q  279 aagattaaatt 289  Q
    || ||||||||    
T  8538276 aatattaaatt 8538286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 11346834 - 11347041
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||||||| |||| | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11346834 tggatcgatatgcgagtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 11346933  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    |||| ||||||||||||| ||| || |||| | | ||||||||| || |||||   ||| |||| | ||||| ||||||||||||| |||||||||||||    
T  11346934 aactacaacaattgtctt-cct-ttgaatgagataaattcaaacctgccaaac-aacaggactcgagcatttcgctcggcattcatgtttttcctttgaa 11347030  T
Q  279 aagattaaatt 289  Q
    |||||||||||    
T  11347031 aagattaaatt 11347041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 28881116 - 28881265
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  28881116 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattcc 28881215  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||||||||||| |   || ||||||||||||||||||||||||||    
T  28881216 aactacaacaattgtctttc--tttgaatggggtaattcaaacttgtcaaac 28881265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 27661459 - 27661310
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| ||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  27661459 tggatcgatatgcgggtgaagttgcttagatcaactaaagatatcatcaaaagtttgattccgccagaagattgtcattagttagggtaaggtgcattcc 27661360  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||||||||||| ||| || ||||||||||||||||||||||||||    
T  27661359 aactacaacaattgtctt-cct-ttgaatggggtaattcaaacttgtcaaac 27661310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 30709723 - 30709930
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | || | |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  30709723 tggatcgatatgcgggtgaagttggttagatcaactgaagatatcatcaaaagtttgattccgccggaagatcgtcattagttagggtaaggtgcattcc 30709822  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    |||| ||||||||||||| ||| || |||| | | ||||||||| || |||||   ||| |||| | ||||| ||||||||||||| |||||||||||||    
T  30709823 aactacaacaattgtctt-cct-ttgaatgagatcaattcaaacctgccaaac-aacaggactcgagcatttcgctcggcattcatttttttcctttgaa 30709919  T
Q  279 aagattaaatt 289  Q
    |||||||||||    
T  30709920 aagattaaatt 30709930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 80 - 231
Target Start/End: Complemental strand, 19036756 - 19036607
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  19036756 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccacaagatcgtcattagttagggtaaggtgcattcc 19036657  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||| |||| || ||| || |||| |||||||||||||||||||||    
T  19036656 aactacaacatttgtatt-cct-ttgaatgaggtaattcaaacttgtcaaac 19036607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 80 - 199
Target Start/End: Complemental strand, 541717 - 541598
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||| |  |||||| |||||||||||| ||||||||||||||||||||||||||    
T  541717 tggatcgatatgcgggtgacgttgctgagatcaactggagatatcatcaacaacttgatttcgccagaagatcgtcattagttagggtaaggtgcattcc 541618  T
Q  180 aactgcaacaattgtcttac 199  Q
    ||||||||||||||||||||    
T  541617 aactgcaacaattgtcttac 541598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 80 - 200
Target Start/End: Original strand, 11027902 - 11028022
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | || | ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11027902 tggatcgatatgcgggtgaagttggttagatcaactgaagatatcatcgaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 11028001  T
Q  180 aactgcaacaattgtcttacc 200  Q
    |||  ||||||||||||||||    
T  11028002 aaccacaacaattgtcttacc 11028022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 38854283 - 38854489
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | || | |||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||    
T  38854283 tggatcgatatgcgggtgaagttggttagatcaactgaagatatcatcaaaagtttgattccgccagaagaccgtcattagtta-ggtaaggtgcattcc 38854381  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    |||  ||||||||||||| ||| || |||| | | ||||||||| || |||||   ||  |||| | ||||| ||||||||||||| |||||||||||||    
T  38854382 aaccacaacaattgtctt-cct-ttgaatgagatcaattcaaacctgccaaac-aacatgactcgagcatttcgctcggcattcatgtttttcctttgaa 38854478  T
Q  279 aagattaaatt 289  Q
    |||||||||||    
T  38854479 aagattaaatt 38854489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 168 - 289
Target Start/End: Original strand, 40011830 - 40011951
Alignment:
Q  168 aaggtgcattccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatt 267  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||| || |  | ||||| ||    
T  40011830 aaggtgcattccaactacaacaattgtcttacctctgaaatggggtaattcaaacttgtcaaacggccataactcaagcatttcgcccaacgttcatgtt 40011929  T
Q  268 tttcctttgaaaagattaaatt 289  Q
    ||||||||||||||||||||||    
T  40011930 tttcctttgaaaagattaaatt 40011951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 88 - 231
Target Start/End: Original strand, 22283704 - 22283845
Alignment:
Q  88 tatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaa 187  Q
    ||||||||||| | |||| ||||||||| ||||||||||||||||||||||||| ||| || ||| || ||||||||| ||||||||||||||||| |||    
T  22283704 tatgcgggtgaagttgcttagatcaacttaagatatcatcaaaagtttgattccaccataaaatcgtccttagttaggataaggtgcattccaactacaa 22283803  T
Q  188 caattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||||||||| ||| || ||||||||||||||||||||||||||    
T  22283804 caattgtctt-cct-ttgaatggggtaattcaaacttgtcaaac 22283845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 186 - 289
Target Start/End: Original strand, 3169766 - 3169869
Alignment:
Q  186 aacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaaagatta 285  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  3169766 aacaattgtcttacctctgaaatggggtaattcaaacttgccaaacggccaagactcaagcatttcgctcggcattcatgtttttcctttgaaaagatta 3169865  T
Q  286 aatt 289  Q
    ||||    
T  3169866 aatt 3169869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 4724156 - 4724076
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4724156 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 4724076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 80 - 232
Target Start/End: Complemental strand, 1400384 - 1400231
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttaggg---taaggtgcat 176  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||    || |  | |    
T  1400384 tggatccatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggagtgaatgcacct 1400285  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacg 232  Q
    |||| || ||||||||||||| ||| || |||||||||||||||||||| ||||||    
T  1400284 tccagctacaacaattgtctt-cct-tttaatggggtaattcaaacttgccaaacg 1400231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 1694913 - 1694994
Alignment:
Q  79 ctggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1694913 ctggaacgatatgcgggtgacgttgttgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 1694994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 35565396 - 35565476
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||    
T  35565396 tggatcgatatgcgggtgacgttgctgagatcaactaaagatatcatcagaagtttgattccgccagaagatcgtcattag 35565476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 36350396 - 36350316
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  36350396 tggatcgatatgtaggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccaccagaagatcgtcattag 36350316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 80 - 166
Target Start/End: Original strand, 33370779 - 33370865
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttaggg 166  Q
    ||||||||||||||||| ||| |||||||||||||||||||||| ||||| ||| |||||||||||||||||||| ||||| |||||    
T  33370779 tggatcgatatgcgggtaacgttgctgagatcaactgaagatattatcaacagtctgattccgccagaagatcatgattaggtaggg 33370865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 233
Target Start/End: Original strand, 18308385 - 18308539
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--t 176  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||| ||||   |||||| || || | |  ||||  |    
T  18308385 tggatcgatatgcgggtgatgttgctgagatcaactgaagatatcatcaaaaatttgattccgccagtagattgacattaggtatggaatgaatgcacct 18308484  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacgg 233  Q
    |||| || ||||||||||||| ||| || |||||||||||||||||||| |||||||    
T  18308485 tccacctacaacaattgtctt-cct-ttgaatggggtaattcaaacttgccaaacgg 18308539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 6793465 - 6793388
Alignment:
Q  83 atcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    |||||||||||| ||| | |||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||    
T  6793465 atcgatatgcggatgaggttgctgagatcaattgaagatatcatcaaaagtttgattcagccagaagatcgtcattag 6793388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 40009653 - 40009746
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtg 173  Q
    |||||||||||| |||| ||| || |||||||||||||||| |||||||| || |||||||| | |||||||| ||||||||||||||||||||    
T  40009653 tggatcgatatgtgggtaacgttgttgagatcaactgaagacatcatcaacagcttgattccacaagaagatcgtcattagttagggtaaggtg 40009746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 171 - 289
Target Start/End: Complemental strand, 1971913 - 1971796
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggtaa-ttcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||| ||||||||||||||||| || |||||||||| |||||||||| |||||  | || |||||| |||||||| | |||||||| ||||    
T  1971913 gtgcattccaactacaacaattgtcttacct-ttgaatggggtaaattcaaacttgccaaacaac-aggactcaagcattttgcaccgcattcatgtttt 1971816  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||||| ||||||    
T  1971815 tcctttgaaaagaataaatt 1971796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 12742819 - 12742883
Alignment:
Q  102 tgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttaggg 166  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||| | ||||| |||||    
T  12742819 tgctgagatcaactgaagatatcatcaacagtctgattccgccagaagatcgtgattaggtaggg 12742883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 171 - 289
Target Start/End: Complemental strand, 40012164 - 40012048
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||| ||||||||||||||||| || |||||||| |||||||||||| |||||   ||| |||||| ||||| || | |||||||| ||||    
T  40012164 gtgcattccaactacaacaattgtcttacct-ttgaatggggtaaattcaaacttgccaaac-aacaggactcaagcatttcgc-ccgcattcatgtttt 40012068  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||||| ||||||    
T  40012067 tcctttgaaaagaataaatt 40012048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 289
Target Start/End: Complemental strand, 3601892 - 3601772
Alignment:
Q  168 aaggtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatat 266  Q
    |||||||||||||||| ||||||||||||||||| || |||||||| |||||||| ||| |||||    |  |||||| |||||||| | |||||||| |    
T  3601892 aaggtgcattccaactacaacaattgtcttacct-ttgaatggggtaaattcaaatttgccaaac-aatatgactcaagcattttgccccgcattcatgt 3601795  T
Q  267 ttttcctttgaaaagattaaatt 289  Q
    |||||||||||||||| ||||||    
T  3601794 ttttcctttgaaaagaataaatt 3601772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 106 - 199
Target Start/End: Original strand, 18920885 - 18920977
Alignment:
Q  106 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaacaattgtcttac 199  Q
    ||||||||||||||||||  |||| |||||||||||||||||||||| | ||||| ||||| || |  | |||||||| |||||||||||||||    
T  18920885 gagatcaactgaagatattctcaacagtttgattccgccagaagatcgtgattaggtaggg-aatgcaccttccaactacaacaattgtcttac 18920977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 80 - 129
Target Start/End: Complemental strand, 35927519 - 35927470
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaa 129  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  35927519 tggatcgatatgcgggtgacgttgctgagatcaactaaagatatcatcaa 35927470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 17195419 - 17195321
Alignment:
Q  102 tgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgca--ttccaactgcaacaattgtcttac 199  Q
    |||||||||||||| ||||||| ||||| | |||||||||||||||||||| | ||||| ||||| |   ||||  |||||||| |||||||||||||||    
T  17195419 tgctgagatcaactaaagatattatcaacaatttgattccgccagaagatcgtgattaggtagggaa---tgcatcttccaactacaacaattgtcttac 17195323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 289
Target Start/End: Complemental strand, 19400911 - 19400794
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||| ||||||||||||||||| || |||| ||| |||||||||||| |||||  | || |||||| ||||| || |  ||||||| ||||    
T  19400911 gtgcattccaactacaacaattgtcttacct-ttgaatgaggtaaattcaaacttgccaaacaacaag-actcaagcatttcgcccctcattcatgtttt 19400814  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||||| ||||||    
T  19400813 tcctttgaaaagaataaatt 19400794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 12805637 - 12805701
Alignment:
Q  102 tgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttaggg 166  Q
    |||||||||||||||||||||||||||| ||| |||||  ||||||||||| | ||||| |||||    
T  12805637 tgctgagatcaactgaagatatcatcaacagtctgattatgccagaagatcgtgattaggtaggg 12805701  T

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Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 541853 - 541818
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||||||||||||||    
T  541853 cagagacacaaggagggtggaacaccttcggtataa 541818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 1171739 - 1171795
Alignment:
Q  176 ttccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||||||||||||||||||||| ||| || ||||||||||||||||||||| |||||||    
T  1171739 ttccaactgcaacaattgtctt-cct-ttgaatggggtaattcaaacttgttaaacggc 1171795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 12805727 - 12805784
Alignment:
Q  176 ttccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||||||||||||||||||||  |  |||||||||||||||||||||| |||||||    
T  12805727 ttccaactgcaacaattgtcttactacg-aaatggggtaattcaaacttgttaaacggc 12805784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 3170081 - 3170021
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaac 231  Q
    ||||||||||||| ||||||||||||||||| || |||||||| |||||||||||| |||||    
T  3170081 gtgcattccaactacaacaattgtcttacct-ttgaatggggtaaattcaaacttgccaaac 3170021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 25498635 - 25498690
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||||||| |||||||    
T  25498635 tccaactgcaacaattgtctt-cct-ttgaatggggtaattcaaacttgttaaacggc 25498690  T

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Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 1695343 - 1695397
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacgg 233  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||    
T  1695343 tccaactgcaacaattgtctt-cctct-aaattgggtaattcaaacttgttaaacgg 1695397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 33371179 - 33371116
Alignment:
Q  168 aaggtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaac 231  Q
    |||||||||||||||| |||||||| |||||||| || |||| ||| ||||||||||||||||||    
T  33371179 aaggtgcattccaactacaacaattatcttacct-ttgaatgaggtaaattcaaacttgtcaaac 33371116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 38854702 - 38854753
Alignment:
Q  174 cattccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgt 226  Q
    ||||||||||||||||||||||||||| |||  |||||| |||||||||||||    
T  38854702 cattccaactgcaacaattgtcttacc-cttggatggggcaattcaaacttgt 38854753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 7082281 - 7082316
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  7082281 cagagacacaaggagggtggaacacgttcggtataa 7082316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 163
Target Start/End: Complemental strand, 17366818 - 17366735
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagtta 163  Q
    ||||| |||||||||||  || || ||||||||||| ||||||| ||||| ||| |||||| ||||||| ||| | ||||||||    
T  17366818 tggattgatatgcgggtaccgttgttgagatcaactaaagatattatcaagagtctgattctgccagaatatcgtgattagtta 17366735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 18308249 - 18308284
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  18308249 cagagacacaaggagggtggaacacgttcggtataa 18308284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 34683577 - 34683524
Alignment:
Q  179 caactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||||||||||||||| ||| || ||||||||||||||||||||| |||||||    
T  34683577 caactgcaacaattgtctt-cct-ttgaatggggtaattcaaacttgttaaacggc 34683524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 36350523 - 36350488
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  36350523 cagagacacaaggagggtggaacacgttcggtataa 36350488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 1695575 - 1695526
Alignment:
Q  176 ttccaactgcaacaattgtcttacctcttaaatggggtaa-ttcaaacttg 225  Q
    ||||||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  1695575 ttccaactgcaacaattttcttacctct-aaatggggtaaattcaaacttg 1695526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 12742909 - 12742966
Alignment:
Q  176 ttccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||||||| |||||||||||||||  |  |||||||||||||||||||||| |||||||    
T  12742909 ttccaactacaacaattgtcttactacg-aaatggggtaattcaaacttgttaaacggc 12742966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 12806379 - 12806333
Alignment:
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttg 225  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  12806379 aactacaacaattgtcttacctctgaaatggggtgaattcaaacttg 12806333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 208
Target Start/End: Complemental strand, 36312005 - 36311900
Alignment:
Q  102 tgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaacaattgtcttacct 201  Q
    ||||||||||  |||||||| |  |||| ||||| |||| ||||||||||| | ||||| ||||| || |  | |||||||| |||||||||||||||||    
T  36312005 tgctgagatcgcctgaagatcttctcaatagtttaattctgccagaagatcgtgattaggtaggg-aatgcaccttccaactacaacaattgtcttacct 36311907  T
Q  202 cttaaat 208  Q
    || ||||    
T  36311906 ctgaaat 36311900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 1399959 - 1399904
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||||||||||||||| |||| ||||| || ||||||||||||||||||| |||||||    
T  1399959 tccaactgcaacaattttctt-cctctgaa-tggggtaattcaaacttgttaaacggc 1399904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 1400518 - 1400485
Alignment:
Q  13 gagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||| ||||||||||    
T  1400518 gagacacaaggagggtggaacacgttcggtataa 1400485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 4723728 - 4723673
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||| ||||||||||||| ||| || ||||||||||||||||||||| |||||||    
T  4723728 tccaactacaacaattgtctt-cct-ttgaatggggtaattcaaacttgttaaacggc 4723673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 35565824 - 35565879
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||||||||||||||||| ||| || |||| |||||||||||||||| |||||||    
T  35565824 tccaactgcaacaattgtctt-cct-ttgaatgaggtaattcaaacttgttaaacggc 35565879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 146; Significance: 7e-77; HSPs: 99)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 39224277 - 39224068
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| |||||||||||||| || |||||||||| |  ||||||||||||||||||| ||||||||||||||||||||||||||    
T  39224277 tggatcgatatgcgggtgacgttgctgagatcaactaaatatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 39224178  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| |||||||| |||||||||| ||||||||||||||||||||| ||||||||||| |||||| ||||| ||||||||||||| ||||||| ||||||    
T  39224177 aactacaacaattctcttacctctgaaatggggtaattcaaacttgccaaacggccaggactcaagcatttcgctcggcattcatgtttttccgttgaaa 39224078  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  39224077 agattaaatt 39224068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 29707621 - 29707409
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||| |||| |||||||| |||||||||| |    
T  29707621 tggatcgatatgcgggtgacgttgctgagatcaactaaagatatcatcaaaagtttgattccgctagaagatcgtcataagttagggcaaggtgcattac 29707522  T
Q  180 aactgcaacaattg---tcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttg 276  Q
    ||||||||||||||   |||||||||| ||||||||||||||||||||| ||||||| ||| |||||| ||||| ||||||||||||| |||||||||||    
T  29707521 aactgcaacaattgtcttcttacctctgaaatggggtaattcaaacttgccaaacggtcaggactcaagcatttcgctcggcattcatgtttttcctttg 29707422  T
Q  277 aaaagattaaatt 289  Q
    |||||||||||||    
T  29707421 aaaagattaaatt 29707409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 35576465 - 35576674
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  35576465 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 35576564  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||| ||||| ||||||||||||||| ||||||||||  |||||| ||||| ||   || ||||| |||| |||||||||    
T  35576565 aactacaacaattgtcttacctctgaaatgaggtaattcaaacttgccaaacggccatgactcaagcatttcgcctagcgttcatgttttccctttgaaa 35576664  T
Q  280 agattaaatt 289  Q
    | ||||||||    
T  35576665 atattaaatt 35576674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 42571856 - 42571647
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| |  ||||||||||||||||||| |||||| ||| |||||||||||||||    
T  42571856 tggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattacttaaggtaaggtgcattcc 42571757  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||||||||| ||||| ||||||| |||||| |||||||    
T  42571756 aactacaacaattgtcttacctctgaaatggggtaattcaaacttgccaaacggccaagactcaaacatttcgctcgacattcatgtttttcatttgaaa 42571657  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  42571656 agattaaatt 42571647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 27035398 - 27035189
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| |||||||||||||| ||||||||||||| |  |||||||| |||||||||| |||||||||||| |||||||||||||    
T  27035398 tggatcgatatgcgggtaacgttgctgagatcaacttaagatatcatcaacaacttgattccaccagaagatcgtcattagttaggataaggtgcattcc 27035299  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||| ||||| ||||||| |||||||||||||     
T  27035298 aactacaacaattgtcttacctctgaaatggggtaattcaaacttgccaaacagccaggactcaaacatttcgctcgacattcatgtttttcctttgaac 27035199  T
Q  280 agattaaatt 289  Q
    | ||||||||    
T  27035198 aaattaaatt 27035189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 82 - 289
Target Start/End: Complemental strand, 47488115 - 47487908
Alignment:
Q  82 gatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaa 181  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||||||| || |||||| |||||||||||| |||||||||| |||||||||||||||||    
T  47488115 gatcgatatgcgggtaacgttgctgagatcaactgaagatgtcatcaacagcttgatttcgccagaagatcgtcattagttatggtaaggtgcattccaa 47488016  T
Q  182 ctgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaaag 281  Q
    || ||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||| ||||| || | || ||||| ||||||||||||||||    
T  47488015 ctacaacaattgtcttacctctgaaatggggtaattcaaacttgccaaacggccatgactcaagcatttcgcccagcgttcatgtttttcctttgaaaag 47487916  T
Q  282 attaaatt 289  Q
    ||||||||    
T  47487915 attaaatt 47487908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 46180360 - 46180151
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||||| |||| ||| || ||||||||| ||||||||||||||| || ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  46180360 tggatcgatatgtgggtaacgttgttgagatcaattgaagatatcatcaacagcttgattctgccagaagatcgtcattagttagggtaaggtgcattcc 46180261  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||| ||||| || | || ||||| ||||||||||||||    
T  46180260 aactacaacaattgtcttacctctgaaatggggtaattcaaacttgccaaacggccatgactcaagcatttcgcccagcgttcatgtttttcctttgaaa 46180161  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  46180160 agattaaatt 46180151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 80 - 291
Target Start/End: Complemental strand, 30309906 - 30309701
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||||||||||||||      |||||||||||| |||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||    
T  30309906 tggatcgatatgcgggtgacg------agatcaactgaatatatcatcaacagcttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 30309813  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| |||||||| |||||||||  ||||||||||||||||||||| |||| |||||| |||||| |||||  |||||||||||| ||||||||||||||    
T  30309812 aactacaacaattatcttacctccgaaatggggtaattcaaacttgccaaatggccaggactcaagcatttcactcggcattcatgtttttcctttgaaa 30309713  T
Q  280 agattaaattat 291  Q
    ||||||||||||    
T  30309712 agattaaattat 30309701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 41874964 - 41874755
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| | | |||||||||||||| |||||||||| |  |  ||||||||||||||||||| | |||||||||||||||||||||||     
T  41874964 tggatcgatatgcgggtaatgttgctgagatcaactaaagatatcattagcaacttgattccgccagaagatcgttattagttagggtaaggtgcattca 41874865  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||| |||||||||| |||||| | ||||||||||||||    
T  41874864 aactacaacaattgtcttacctctgaaatggggtaattcaaacttgccaaacggccaggactcaagcattttgctcagcattcgtgtttttcctttgaaa 41874765  T
Q  280 agattaaatt 289  Q
    ||| ||||||    
T  41874764 agaataaatt 41874755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 45689245 - 45689454
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||| |||||| ||||||||||||||||||||||||||    
T  45689245 tggatggatatgcgggtgacgttgctgagatcaactgaagatatcatcaacagcttgattccgccataagatcgtcattagttagggtaaggtgcattcc 45689344  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||| |||| || ||||||||||||| ||||||||||  |||||| ||||| || |  | ||||| ||||||||| ||||    
T  45689345 aactacaacaattgtcttacctctgaaattggataattcaaacttgccaaacggccatgactcaagcatttcgcccaacgttcatgtttttccttcgaaa 45689444  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  45689445 agattaaatt 45689454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 48568484 - 48568275
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| |  |||||| |||||||||||  ||||||||||||||||||||||||||    
T  48568484 tggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaacaacttgatttcgccagaagattgtcattagttagggtaaggtgcattcc 48568385  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||| |||| |||||| ||||||||| |||| |||||| | |||| ||||| |||| |||||||| ||||||||||||||    
T  48568384 aactacaacaattgtcttacctctgaaattgggtaactcaaacttgccaaatggccaggattcaagcatttcgctcagcattcatgtttttcctttgaaa 48568285  T
Q  280 agattaaatt 289  Q
    ||| ||||||    
T  48568284 agaataaatt 48568275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 50068339 - 50068130
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||| |||| || ||||||||||||||||||| ||||||||||| ||||||||||||||    
T  50068339 tggatcgatatgcgggtaacgttgctgagatcaactgaagatatcgtcaacagcttgattccgccagaagatcgtcattagttagagtaaggtgcattcc 50068240  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| |||||||||||||| |||| |||||||||||| |||||||||||||||||||  |||||| ||||| || |  | ||||| ||||||||||||||    
T  50068239 aactacaacaattgtcttagctctgaaatggggtaatgcaaacttgtcaaacggccatgactcaagcatttcgcccatcgttcatgtttttcctttgaaa 50068140  T
Q  280 agattaaatt 289  Q
    | ||||||||    
T  50068139 atattaaatt 50068130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 3658599 - 3658806
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||||||  || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  3658599 tggatcgatatgcaagtaacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtagggtaaggtgcattcc 3658698  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||||| |||||| | ||  ||| |||| || || || ||||||| ||||||||||||||    
T  3658699 aactacaacaatcgtcttacctctgaaatggggtaattcaaacttgccaaacgacaagtcctc-aaca-ttcgcccgacattcatgtttttcctttgaaa 3658796  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  3658797 agattaaatt 3658806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 12791353 - 12791146
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  12791353 tggatcgatatgcgggtgacgtttttgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttaggataaggtgcattcc 12791254  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| |||||| | ||  ||  | || || || || ||||||| ||||||||||||||    
T  12791253 aactacaacaattgtcttacctctgaaatggggtaattcaaacttgccaaacgacaagtcct-tagca-ttcgcccgacattcatgtttttcctttgaaa 12791156  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  12791155 agattaaatt 12791146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 27486770 - 27486562
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |  ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  27486770 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaacaacttgattccgcctgaagatcgtcattagttagggtaaggtgcattcc 27486671  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    |||| ||||||||||||||||| || |||| | | ||||||||| || |||||   |||||||||| ||||  ||||||||||||| |||||||||||||    
T  27486670 aactacaacaattgtcttacct-tttaatgagataaattcaaacctgccaaac-aacagaactcaagcattccgctcggcattcatgtttttcctttgaa 27486573  T
Q  279 aagattaaatt 289  Q
    |||||||||||    
T  27486572 aagattaaatt 27486562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 80 - 291
Target Start/End: Original strand, 51269928 - 51270138
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| |  ||||||||||||||||||| ||||||||||||||||||||||||||    
T  51269928 tggatcgatatgcgggtgacgttgctgggatcaactgaagatatcatcaacaacttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 51270027  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    |||| ||||||||||||||||| || |||| | | ||||||||| ||  ||||   ||| |||||| ||||| ||||||||||||| |||||||||||||    
T  51270028 aacttcaacaattgtcttacct-ttgaatgagataaattcaaacctgctaaac-aacaggactcaagcatttcgctcggcattcatgtttttcctttgaa 51270125  T
Q  279 aagattaaattat 291  Q
    |||||||||||||    
T  51270126 aagattaaattat 51270138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 29762301 - 29762093
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||| ||||||||| || |||||||||||||| |||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  29762301 tggatcgatatacgggtgacgttgatgagatcaactgaaaatatcatcaacaacttgattccgccagaagatcatcattagttagggtaaggtgcattcc 29762202  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    |||| ||||||||||||||||| || |||| | | ||||||||| || |||||   ||| |||||| ||||| |||||| |||||| |||||||||||||    
T  29762201 aacttcaacaattgtcttacct-ttgaatgagataaattcaaacctgccaaac-aacaggactcaagcatttcgctcggaattcatgtttttcctttgaa 29762104  T
Q  279 aagattaaatt 289  Q
    |||||||||||    
T  29762103 aagattaaatt 29762093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 49427513 - 49427720
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  49427513 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 49427612  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    |||| ||||||||||||| ||| || |||| | | ||||||||| || |||||   ||| |||| | ||||| ||||||||||||| |||||| ||||||    
T  49427613 aactacaacaattgtctt-cct-ttgaatgagataaattcaaacctgccaaac-aacaggactcgagcatttcgctcggcattcatgtttttcgtttgaa 49427709  T
Q  279 aagattaaatt 289  Q
    |||||||||||    
T  49427710 aagattaaatt 49427720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 49263068 - 49262859
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||| |||||| ||| ||| || ||||||||||||||||||||||||| |  |||||||| | |||| ||| |||||||||| |||||||||||||||    
T  49263068 tggatctatatgctggtaacgttgttgagatcaactgaagatatcatcaacatcttgattcctctagaatatcttcattagttatggtaaggtgcattcc 49262969  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||  |||| | ||||| || | || ||||| ||||||||||||||    
T  49262968 aactacaacaattgtcttacctctgaaatggggtgattcaaacttgccaaacggccatgactccagcatttcgcccagcgttcatgtttttcctttgaaa 49262869  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  49262868 agattaaatt 49262859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 19160443 - 19160592
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | |||| ||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  19160443 tggatcgatatgcgggtgaagttgcttagatcaattgaagatatcatcaaaagtttgattccgccagaagattgtcattagttagggtaaggtgcattcc 19160542  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||| ||||||||||||| ||| || ||||||||||||||||||||||||||    
T  19160543 aactacaacaattgtctt-cct-ttgaatggggtaattcaaacttgtcaaac 19160592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 80 - 199
Target Start/End: Complemental strand, 39856986 - 39856867
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  39856986 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattctgccagaagatcgtcattagttagggtaaggtgcattcc 39856887  T
Q  180 aactgcaacaattgtcttac 199  Q
    |||| |||||||||||||||    
T  39856886 aactacaacaattgtcttac 39856867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 44337399 - 44337191
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| | | |||||||||||||||||| |||||||||||||||||||||||| |    
T  44337399 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaacaatatgattccgccagaagatcgtcattagttagggtaaggtgcatttc 44337300  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    || ||||||||||||||||||| || |||| | | ||||||||| || |||||   ||| |||||| ||||| ||||| ||||||| |||||||||||||    
T  44337299 aaatgcaacaattgtcttacct-ttgaatgagataaattcaaacctgccaaac-aacaggactcaagcatttcgctcgacattcatgtttttcctttgaa 44337202  T
Q  279 aagattaaatt 289  Q
    || | ||||||    
T  44337201 aatactaaatt 44337191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 13635377 - 13635170
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||| | || | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13635377 tggatcgatatgcgggtgaagttggttagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattagttagggtaaggtgcattcc 13635278  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    |||  ||||||||||||| ||| || |||| | | |||| |||| || |||||   ||| |||| | ||||| ||||||||||||| |||||||||||||    
T  13635277 aaccacaacaattgtctt-cct-ttgaatgagatcaatttaaacctgccaaac-aacaggactcgagcatttcgctcggcattcatgtttttcctttgaa 13635181  T
Q  279 aagattaaatt 289  Q
    |||||||||||    
T  13635180 aagattaaatt 13635170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 134 - 289
Target Start/End: Complemental strand, 49598917 - 49598762
Alignment:
Q  134 ttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacgg 233  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||| |||| |||||||||||||||| |||||||    
T  49598917 ttgattccgccagaagatcgtcattagttagggtaaggtgcattccaactacaacaatcgtcttacctctgaaatcgggtaattcaaacttgccaaacgg 49598818  T
Q  234 ccagaactcaaacattttgctcggcattcatatttttcctttgaaaagattaaatt 289  Q
    |||  ||||||  ||||||| |  | ||||| ||||||||||||||||||||||||    
T  49598817 ccatgactcaaggattttgcccatcgttcatgtttttcctttgaaaagattaaatt 49598762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 29436099 - 29436307
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||| |  ||||||  ||||||||||| ||||||||||||||||||||||||||    
T  29436099 tggatcgatacgcgggtgacgttgctgagatcaactgaagatatcatcaacaacttgattaagccagaagatcgtcattagttagggtaaggtgcattcc 29436198  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    ||||||||||||| |||||||| || ||||   | ||||||||| || |||||   ||  |||||| ||||| ||||||||||||| ||||||| |||||    
T  29436199 aactgcaacaattttcttacct-ttgaatgaaataaattcaaacctgccaaac-aacatgactcaagcatttcgctcggcattcatgtttttccattgaa 29436296  T
Q  279 aagattaaatt 289  Q
    |||||||||||    
T  29436297 aagattaaatt 29436307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 80 - 232
Target Start/End: Complemental strand, 21484723 - 21484573
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||| ||||||||||||||||||    
T  21484723 tggatcgatatgcgagtgacgttgctgagatcaactgaagatatcatcaaaagtttgatttcaccagaagatcgtcattaggtagggtaaggtgcattcc 21484624  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacg 232  Q
    |||| ||||||||||||| ||| || |||  ||||||||||||||| ||||||    
T  21484623 aactacaacaattgtctt-cct-ttgaatatggtaattcaaacttgccaaacg 21484573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 44597827 - 44598035
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    |||||||||||| |||||||| || ||||||||||||||||||||||||| |  ||||||||||| ||||||| |||||||||||||||| |||||||||    
T  44597827 tggatcgatatgtgggtgacgttgatgagatcaactgaagatatcatcaacaacttgattccgccggaagatcgtcattagttagggtaaagtgcattcc 44597926  T
Q  180 aactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaa 278  Q
    |||| ||||||||||||||||| || |||| | | ||||||||| || |||||   ||| |||    ||||| ||||||||||||| |||||||||||||    
T  44597927 aacttcaacaattgtcttacct-ttgaatgagataaattcaaacctgccaaac-aacaggacttttgcatttcgctcggcattcatgtttttcctttgaa 44598024  T
Q  279 aagattaaatt 289  Q
    |||||||||||    
T  44598025 aagattaaatt 44598035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 80 - 234
Target Start/End: Complemental strand, 14173838 - 14173683
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--t 176  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||| |  ||||  |    
T  14173838 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggtatgaatgcacct 14173739  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||| || ||||||||||||| ||| || |||||||||||||||||||| ||||||||    
T  14173738 tccagctacaacaattgtctt-cct-ttgaatggggtaattcaaacttgccaaacggc 14173683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 22527680 - 22527782
Alignment:
Q  127 caaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgt 226  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| || |||||||||||||||||||||    
T  22527680 caaaagtttgatttcgccagaagatcatcattagttagggtaaggtgcattccaactacaacaattgtctt-cct-ttgaatggggtaattcaaacttgt 22527777  T
Q  227 caaac 231  Q
    |||||    
T  22527778 caaac 22527782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 156
Target Start/End: Complemental strand, 24270443 - 24270367
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatca 156  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24270443 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatca 24270367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 36909687 - 36909767
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  36909687 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 36909767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 37778207 - 37778285
Alignment:
Q  82 gatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37778207 gatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 37778285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 17686441 - 17686361
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17686441 tggatcgatatgcgggtgacgtagctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 17686361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 80 - 232
Target Start/End: Original strand, 49396830 - 49396983
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--t 176  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| || || | |  ||||  |    
T  49396830 tggattgatatgcgggtgacgttgctgagatcaactgaagatatcaacaaaagtttgattccgccagaagatcgtcattaggtatggaatgaatgcacct 49396929  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacg 232  Q
    |||| || ||||||||||||| ||| || |||||||||||||||||||| ||||||    
T  49396930 tccagctacaacaattgtctt-cct-ttgaatggggtaattcaaacttgccaaacg 49396983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 49926460 - 49926380
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  49926460 tggatcgatatgcaggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcgtcattag 49926380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 80 - 232
Target Start/End: Original strand, 17697172 - 17697322
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||| ||| |||||||||||||||||| | ||||| || || || |  | ||||    
T  17697172 tggatcgatatgcgggtgacgttgctgagatcaactgaagatattatcaagagtctgattccgccagaagatcgtgattaggtaagg-aatgcaccttcc 17697270  T
Q  180 aactgcaacaattgtcttacctcttaaat-ggggtaattcaaacttgtcaaacg 232  Q
    |||| ||||| ||||||| ||| |||||| ||||||||||||||||||||||||    
T  17697271 aactacaacagttgtctt-cct-ttaaatgggggtaattcaaacttgtcaaacg 17697322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 35587009 - 35586928
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagt 161  Q
    ||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  35587009 tggatcgatatgcgggtgaccttgctgagatcaattgaagatatcatcaaaagtttgattccgccagaagatcgtcattagt 35586928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 48215324 - 48215409
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagg 165  Q
    ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  48215324 tggatcgatatgcgggtgaagttgcttagatcaactgaagatatcatcaaaagtttgattccgccagaagatagtcattagttagg 48215409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 234
Target Start/End: Original strand, 13973050 - 13973205
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--t 176  Q
    |||||| |||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||| || || | |  ||||  |    
T  13973050 tggatcaatatgcgggtgacattgctgagatcaattgaagatatcatcaaaagtttgattccgccataagatcgtcattaggtacggaatgaatgcacct 13973149  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||| || ||||||||||||| ||| || |||||||||||||||||||| ||||||||    
T  13973150 tccagctacaacaattgtctt-cct-ttgaatggggtaattcaaacttgccaaacggc 13973205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 234
Target Start/End: Original strand, 35185097 - 35185252
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--t 176  Q
    ||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||| |  || | |  ||||  |    
T  35185097 tggatcgatatgcaggtgacgttgctgaaatcaattgaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtgcggaatgaatgcacct 35185196  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||| || ||||||||||||| ||| || |||| ||||||||||||||||||||||||    
T  35185197 tccagctacaacaattgtctt-cct-ttgaatgaggtaattcaaacttgtcaaacggc 35185252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 234
Target Start/End: Complemental strand, 40533366 - 40533211
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--t 176  Q
    ||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||  | | |  ||||  |    
T  40533366 tggatcgatatgcgggtaacgttgccgagatcaactgaagatatcatcaaaagtttaattccgccagaagatcgtcattaggtaccgaatgaatgcacct 40533267  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||| || |||||||||| || |||| ||| |||||||||||||||||||||||||||    
T  40533266 tccagctacaacaattgt-tttcctc-taactggggtaattcaaacttgtcaaacggc 40533211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 80 - 249
Target Start/End: Original strand, 17372853 - 17373019
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||| || || ||| || ||||||||||||||||||||||| ||||||| ||| |||||||||||| ||||||| || || || |  | ||||    
T  17372853 tggatcgatatacgtgtaacgttgatgagatcaactgaagatatcatcgaaagtttaatttcgccagaagatcgtcattaggtatggaaatgcaccttcc 17372952  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacatt 249  Q
    |||| ||||||||||||| ||| || |||| |||||||||||||||| |||||| ||| |||||||||||    
T  17372953 aactacaacaattgtctt-cct-ttgaatgaggtaattcaaacttgttaaacgg-caggactcaaacatt 17373019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 23342767 - 23342847
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||    
T  23342767 tggatcgatatgcgggtaacgttgctgagataaactgaagatatcatcaaaagtttgattcctccagaagatcgtcattag 23342847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 35526257 - 35526189
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaa 148  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  35526257 tggatcgatatgcgggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccgctagaa 35526189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 80 - 234
Target Start/End: Original strand, 6435898 - 6436053
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--t 176  Q
    |||||||||||| | |||||| || ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| || || | |  ||||  |    
T  6435898 tggatcgatatgtgagtgacgttgttgagatcaagtgaagatatcatcaaaagtttgattccgccagaagatcgtcattaggtacggaatgaatgcacct 6435997  T
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||| || ||||||||||||| ||| || |||| ||||||||||||||| ||||||||    
T  6435998 tccagctacaacaattgtctt-cct-ttgaatgaggtaattcaaacttgccaaacggc 6436053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 18170153 - 18170231
Alignment:
Q  82 gatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  18170153 gatcgatatgcgggtgacattgctgagctcaactgaagatatcatcaaaggtttgattccgccagaagatcgtcattag 18170231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 38046512 - 38046434
Alignment:
Q  82 gatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    |||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  38046512 gatcaatatgccggtgacgttgctgagatcaactgaagatatcatcaaaagtttgattccaccagaagatcgtcattag 38046434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 226
Target Start/End: Original strand, 13283831 - 13283974
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||| ||| ||| ||||||||||||||||| |||| ||||| ||| |||||||||||||||||| | ||||| ||| | || |  | ||||    
T  13283831 tggatcgatatgcaggtaacgttgctgagatcaactgaatatattatcaacagtctgattccgccagaagatcgtgattaggtagag-aatgcaccttcc 13283929  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgt 226  Q
    |||| ||||||||||||| ||| || |||||||||||||||||||||    
T  13283930 aactacaacaattgtctt-cct-ttgaatggggtaattcaaacttgt 13283974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 80 - 198
Target Start/End: Original strand, 5765332 - 5765449
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| |||||||||||| ||||||||| |||||  || |||||||||||||||||| | ||||| ||||| || |  | ||||    
T  5765332 tggatcgatatgcgggtaacgttgctgagatcaaatgaagatattatcaaccgtctgattccgccagaagatcgtgattaggtaggg-aatgcaccttcc 5765430  T
Q  180 aactgcaacaattgtctta 198  Q
    |||| ||||||||||||||    
T  5765431 aactacaacaattgtctta 5765449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 234
Target Start/End: Original strand, 41780825 - 41780974
Alignment:
Q  86 gatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaag-gtgca--ttccaac 182  Q
    ||||||| ||||||| |||| |||||||||||| |||||||||||||||||||| ||||||||| || ||||||| || || | |  ||||  || || |    
T  41780825 gatatgcaggtgacgttgctaagatcaactgaatatatcatcaaaagtttgatttcgccagaagttcgtcattaggtacggaatgaatgcaccttgcagc 41780924  T
Q  183 tgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    | ||||||||||||| ||| || |||||||||||||||||||| ||||||||    
T  41780925 tacaacaattgtctt-cct-ttgaatggggtaattcaaacttgccaaacggc 41780974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 289
Target Start/End: Original strand, 47487694 - 47487811
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||| ||||||||||||||||| || |||||||| |||||||||||| |||||   ||| |||||| ||||| || | |||||||| ||||    
T  47487694 gtgcattccaactacaacaattgtcttacct-ttgaatggggtaaattcaaacttgccaaac-aacaggactcaagcatttcgccccgcattcatgtttt 47487791  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||||| ||||||    
T  47487792 tcctttgaaaagaataaatt 47487811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 80 - 226
Target Start/End: Complemental strand, 24363880 - 24363737
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||| | ||| || ||||| ||||||||||||| ||||| ||||||||||||  |||||||| | ||||| ||||| || |  | ||||    
T  24363880 tggatcgatatgcggttaacgttgttgagagcaactgaagatattatcaagagtttgattccgttagaagatcgtgattaggtaggg-aatgcaccttcc 24363782  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgt 226  Q
    |||| ||||||||||||| ||| || |||| ||||||||||||||||    
T  24363781 aactacaacaattgtctt-cct-ttgaatgaggtaattcaaacttgt 24363737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 18842565 - 18842637
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatc 152  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||  |||| ||| |||| |||||||||||||    
T  18842565 tggatcgatatgcgggtaacgttgctgagatcaactgaagatattgtcaagagtctgatcccgccagaagatc 18842637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 289
Target Start/End: Complemental strand, 3659018 - 3658904
Alignment:
Q  174 cattccaactgcaacaattgtcttacctcttaaatggggtaa-ttcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcc 272  Q
    |||| ||||| ||||||||||||||||| || |||||||||| |||||||||| |||||  | || |||||| ||||| || || ||||||| |||||||    
T  3659018 cattacaactacaacaattgtcttacct-ttgaatggggtaaattcaaacttgccaaacaac-aggactcaagcatttcgcccgacattcatgtttttcc 3658921  T
Q  273 tttgaaaagattaaatt 289  Q
    |||||||||| ||||||    
T  3658920 tttgaaaagaataaatt 3658904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 289
Target Start/End: Original strand, 49262654 - 49262771
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||| ||| ||||||||||||| || |||||||| |||||||||||| |||||   ||| |||||| ||||| || | |||||||| ||||    
T  49262654 gtgcattccaactacaagaattgtcttacct-ttgaatggggtaaattcaaacttgccaaac-aacaggactcaagcatttcgccccgcattcatgtttt 49262751  T
Q  270 tcctttgaaaagattaaatt 289  Q
     |||||||||||| ||||||    
T  49262752 ccctttgaaaagaataaatt 49262771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 289
Target Start/End: Original strand, 50067916 - 50068033
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatgggg-taattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||| ||||||||||||||||| || |||||||  |||||||||||| |||||   ||| |||||| |||||||| |  ||||||| ||||    
T  50067916 gtgcattccaactacaacaattgtcttacct-ttgaatggggcaaattcaaacttgccaaac-aacaggactcaagcattttgcccctcattcatgtttt 50068013  T
Q  270 tcctttgaaaagattaaatt 289  Q
    || |||||||||| ||||||    
T  50068014 tcatttgaaaagaataaatt 50068033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 289
Target Start/End: Complemental strand, 51270349 - 51270233
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||| ||||||||||||||||| || |||||||| |||||||||||| |||||  | || ||||||||||||  | | ||||||||  |||    
T  51270349 gtgcattccaactacaacaattgtcttacct-ttgaatggggtcaattcaaacttgccaaacaacaag-actcaaacatttcacccagcattcat-gttt 51270253  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||||| ||||||    
T  51270252 tcctttgaaaagaataaatt 51270233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 12790925 - 12790870
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||    
T  12790925 tccaactgcaacaattgtctt-cctct-aaatggggtaattcaaacttgttaaacggc 12790870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 200
Target Start/End: Complemental strand, 16532170 - 16532051
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgca--tt 177  Q
    ||||| |||||||| || ||| |||||||||||||||||||||| ||||| ||| ||||| ||| |||||||| | ||||| || || |   ||||  ||    
T  16532170 tggattgatatgcgtgtaacgttgctgagatcaactgaagatattatcaatagtctgatttcgctagaagatcgtgattaggtatggaa---tgcatctt 16532074  T
Q  178 ccaactgcaacaattgtcttacc 200  Q
    |||||| ||||||||||||||||    
T  16532073 ccaactacaacaattgtcttacc 16532051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 289
Target Start/End: Original strand, 48226824 - 48226872
Alignment:
Q  241 tcaaacattttgctcggcattcatatttttcctttgaaaagattaaatt 289  Q
    |||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  48226824 tcaaacctttcgctcggcattcatgtttttcctttgaaaagattaaatt 48226872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 225
Target Start/End: Complemental strand, 14772586 - 14772468
Alignment:
Q  106 gagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaacaattgtcttacctctta 205  Q
    |||||||| ||||||| |  |||| |||||||||| ||||||||||| | ||||| ||||| || |  | |||||||| ||| |||||| |||||||| |    
T  14772586 gagatcaattgaagatgttctcaacagtttgattctgccagaagatcgtgattaggtaggg-aatgcaccttccaactacaagaattgtgttacctctaa 14772488  T
Q  206 aatggggtaattcaaacttg 225  Q
    |||| | |||||||||||||    
T  14772487 aatgagataattcaaacttg 14772468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 289
Target Start/End: Original strand, 27034975 - 27035092
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||| ||| ||||||||||||| | ||||||||| |||||||||||| |||||   ||  |||||| |||||  | ||||||||||  |||    
T  27034975 gtgcattccaactacaataattgtcttacctttgaaatggggtaaattcaaacttgccaaac-aacatgactcaagcatttcacccggcattcat-gttt 27035072  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||||| ||||||    
T  27035073 tcctttgaaaagaataaatt 27035092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 44597691 - 44597726
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||||||||||||||    
T  44597691 cagagacacaaggagggtggaacaccttcggtataa 44597726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 289
Target Start/End: Complemental strand, 45689668 - 45689551
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggtaa-ttcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||| ||| ||||||||||||||||| || |||||||||| ||||||||||  ||||  | || |||||| ||||| || | |||||||| ||||    
T  45689668 gtgcattcctactacaacaattgtcttacct-ttgaatggggtaaattcaaacttgctaaacaac-aggactcaagcatttcgccccgcattcatgtttt 45689571  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||| | ||||||    
T  45689570 tcctttgaaaaaaataaatt 45689551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 48226760 - 48226799
Alignment:
Q  155 cattagttagggtaaggtgcattccaactgcaacaattgt 194  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  48226760 cattagttagggtaaggtgcattccaactacaacaattgt 48226799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 19262471 - 19262413
Alignment:
Q  102 tgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattag 160  Q
    ||||||||||||||||||||||  |||| |||||||||||||| |||||| || |||||    
T  19262471 tgctgagatcaactgaagatattctcaacagtttgattccgcctgaagattatgattag 19262413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 46
Target Start/End: Complemental strand, 29762436 - 29762402
Alignment:
Q  12 agagacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||||||||||||||||||||||||||    
T  29762436 agagacacaaggagggtggaacaccttcggtataa 29762402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 38044844 - 38044784
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaa 239  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||||| ||||||| ||||    
T  38044844 tccaactgcaacaattgtctt-cctctgaa-tggggtaattcaaacttgttaaacggcaagaa 38044784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 14173410 - 14173355
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||||||||||||||||| ||||| ||||| |||||||||||||||| |||||||    
T  14173410 tccaactgcaacaattgtctt-cctct-aaatgcggtaattcaaacttgttaaacggc 14173355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 16098061 - 16098014
Alignment:
Q  185 caacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacgg 233  Q
    ||||||||||||||| ||| |||||||||||||||||||||| ||||||    
T  16098061 caacaattgtcttac-tctgaaatggggtaattcaaacttgttaaacgg 16098014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 49397198 - 49397252
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacgg 233  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||||||| ||||||    
T  49397198 tccaactgcaacaattgtctt-cct-ttgaatggggtaattcaaacttgttaaacgg 49397252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 14173974 - 14173939
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  14173974 cagagacacaaggagggtggaacacgttcggtataa 14173939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 18170015 - 18170050
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  18170015 cagagacacaaggagggtggaacacgttcggtataa 18170050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 24270579 - 24270544
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  24270579 cagagacacaaggagggtggaacacgttcggtataa 24270544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 29435963 - 29435998
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  29435963 cagagacacaaggagggtggaacacgttcggtataa 29435998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 29707196 - 29707250
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttg 225  Q
    ||||||||||||| ||||||||||||||||| || |||||||| ||||||||||||    
T  29707196 gtgcattccaactacaacaattgtcttacct-ttgaatggggtcaattcaaacttg 29707250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 35587145 - 35587110
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  35587145 cagagacacaaggagggtggaacacgttcggtataa 35587110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 38046650 - 38046615
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  38046650 cagagacacaaggagggtggaacacgttcggtataa 38046615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 39224413 - 39224378
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  39224413 cagagacacaaggagggtggaacacgttcggtataa 39224378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 42571992 - 42571957
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||| ||||||||||    
T  42571992 cagagacacaaggagggtggaacacgttcggtataa 42571957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 44337535 - 44337500
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||||| |||||||||||||||||||||    
T  44337535 cagagacacaaggatggtggaacaccttcggtataa 44337500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 51269792 - 51269827
Alignment:
Q  11 cagagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||||||||| ||||||    
T  51269792 cagagacacaaggagggtggaacaccttctgtataa 51269827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 12790693 - 12790742
Alignment:
Q  176 ttccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttg 225  Q
    ||||||||||||||||| ||||||||| |||||||||| ||||||||||||    
T  12790693 ttccaactgcaacaattatcttacctc-taaatggggtaaattcaaacttg 12790742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 289
Target Start/End: Complemental strand, 18170569 - 18170457
Alignment:
Q  176 ttccaactgcaacaattgtcttacctcttaaatggggtaa-ttcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctt 274  Q
    |||||||| |||||||||| |||||||| || |||||||| |||||||| | |||||  | ||| ||||||||||| || |||| ||| |  ||||||||    
T  18170569 ttccaactacaacaattgtgttacctctgaa-tggggtaaattcaaactggccaaacaacaaga-ctcaaacatttcgcccggcgttcttgcttttcctt 18170472  T
Q  275 tgaaaagattaaatt 289  Q
    |||||||| ||||||    
T  18170471 tgaaaagaataaatt 18170457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 35185540 - 35185592
Alignment:
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||    
T  35185540 aactgcaacaattgtctt-cct-ttaaatgtggtaattcaaacttgttaaacggc 35185592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 289
Target Start/End: Original strand, 39223856 - 39223971
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatattttt 270  Q
    ||||||||||||| ||||||||||||||| | || ||||||  ||||||||| ||||||||   ||  |||||| |||||  | ||||||||||  ||||    
T  39223856 gtgcattccaactacaacaattgtcttacat-ttgaatgggtaaattcaaacctgtcaaac-aacatgactcaagcatttcacccggcattcat-gtttt 39223952  T
Q  271 cctttgaaaagattaaatt 289  Q
    |||||||||||| ||||||    
T  39223953 cctttgaaaagaataaatt 39223971  T

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Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 201
Target Start/End: Original strand, 44336978 - 44337008
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacct 201  Q
    |||||||||||||||||||||||||||||||    
T  44336978 gtgcattccaactgcaacaattgtcttacct 44337008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 49926030 - 49925978
Alignment:
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||| |||||||    
T  49926030 aactgcaacaattgtctt-cctct-aaatggggcaattcaaacttgttaaacggc 49925978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 6436326 - 6436381
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||||||||||||||||| |||| | |||| |||||||||||||||| |||||||    
T  6436326 tccaactgcaacaattgtctt-cctc-tgaatgtggtaattcaaacttgttaaacggc 6436381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 201
Target Start/End: Original strand, 21484432 - 21484465
Alignment:
Q  168 aaggtgcattccaactgcaacaattgtcttacct 201  Q
    |||||||||||||||| |||||||||||||||||    
T  21484432 aaggtgcattccaactacaacaattgtcttacct 21484465  T

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Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 35576331 - 35576364
Alignment:
Q  13 gagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||| ||||||||||    
T  35576331 gagacacaaggagggtggaacacgttcggtataa 35576364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 35586571 - 35586516
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||||||||||||||||| ||| || |||| |||||||||||||||| |||||||    
T  35586571 tccaactgcaacaattgtctt-cct-ttgaatgaggtaattcaaacttgttaaacggc 35586516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 40532938 - 40532883
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||| ||||||||||||| ||||| ||||| |||||||||||||||| |||||||    
T  40532938 tccaactacaacaattgtctt-cctct-aaatgaggtaattcaaacttgttaaacggc 40532883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 42571428 - 42571373
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    ||||||||||||||||||||| ||| || | ||||||||||||||||||| |||||||    
T  42571428 tccaactgcaacaattgtctt-cct-ttgagtggggtaattcaaacttgttaaacggc 42571373  T

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Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 22528054 - 22528104
Alignment:
Q  174 cattccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgt 226  Q
    ||||||||||||||||||||||||| ||| || |||||| |||||||||||||    
T  22528054 cattccaactgcaacaattgtctta-ctc-tagatggggcaattcaaacttgt 22528104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 35184963 - 35184995
Alignment:
Q  14 agacacaaggagggtggaacaccttcggtataa 46  Q
    |||||||||||||||||||||| ||||||||||    
T  35184963 agacacaaggagggtggaacacgttcggtataa 35184995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 36910114 - 36910168
Alignment:
Q  177 tccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacgg 233  Q
    ||||||||||||||| ||||| ||||| || ||||||||||||||||||| ||||||    
T  36910114 tccaactgcaacaatcgtctt-cctctgaa-tggggtaattcaaacttgttaaacgg 36910168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 234
Target Start/End: Original strand, 41781221 - 41781276
Alignment:
Q  178 ccaactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggc 234  Q
    |||||| |||||||||| |||||| || || |||||||||||||||||| |||||||    
T  41781221 ccaactacaacaattgtgttacct-ttgaacggggtaattcaaacttgttaaacggc 41781276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 49397430 - 49397375
Alignment:
Q  176 ttccaactgcaacaattgtcttacctcttaaatggggtaa-ttcaaacttgtcaaac 231  Q
    ||||||||||||||||| ||||| |||| || |||||||| ||||||||||||||||    
T  49397430 ttccaactgcaacaattatcttatctctgaa-tggggtaaattcaaacttgtcaaac 49397375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 80 - 289
Target Start/End: Complemental strand, 17996 - 17787
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||| |    
T  17996 tggatcgatatgcgggtaacgttgctgagatcaactgaagatatcatcaacagcttgattccgccagaagatcgtcattagttagggtaaggtgcatttc 17897  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||| ||||||| ||||||||||||| |||||||  || |||||| ||||| ||||||||||||| ||||||||||| ||    
T  17896 aactacaacaattgtcttacctctgaaatgggataattcaaacttgccaaacggttaggactcaagcatttcgctcggcattcatgtttttcctttggaa 17797  T
Q  280 agattaaatt 289  Q
    | ||||||||    
T  17796 aaattaaatt 17787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 80 - 289
Target Start/End: Original strand, 2395 - 2604
Alignment:
Q  80 tggatcgatatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattcc 179  Q
    ||||||||||||||||| ||| || ||||||||| ||||||||||||||| || |||||||||||| |||||| ||||||||||||||||||||||||||    
T  2395 tggatcgatatgcgggtaacgttgatgagatcaattgaagatatcatcaacagcttgattccgccaaaagatcgtcattagttagggtaaggtgcattcc 2494  T
Q  180 aactgcaacaattgtcttacctcttaaatggggtaattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttttcctttgaaa 279  Q
    |||| ||||||||||||||||||| ||||||||||||||||| ||  ||||||||||  |||||| ||||| || |    ||||| ||||||||||||||    
T  2495 aactacaacaattgtcttacctctgaaatggggtaattcaaaattaccaaacggccatgactcaagcatttcgcccaatgttcatgtttttcctttgaaa 2594  T
Q  280 agattaaatt 289  Q
    ||||||||||    
T  2595 agattaaatt 2604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 2261 - 2294
Alignment:
Q  13 gagacacaaggagggtggaacaccttcggtataa 46  Q
    ||||||||||||||||||||||| ||||||||||    
T  2261 gagacacaaggagggtggaacacgttcggtataa 2294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 88 - 231
Target Start/End: Original strand, 85462 - 85603
Alignment:
Q  88 tatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaa 187  Q
    ||||||||||| | |||| ||||||||| |||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||||||||||| |||    
T  85462 tatgcgggtgaagttgcttagatcaacttaagatatcatcaaaagtttgattcagccataaaatcgtcattagttagggtaaggtgcattccaactacaa 85561  T
Q  188 caattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||||||||| ||| || ||||||||||||||||||||||||||    
T  85562 caattgtctt-cct-ttgaatggggtaattcaaacttgtcaaac 85603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 64099 - 64227
Alignment:
Q  102 tgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaacaattgtcttacct 201  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||| |||||||||| ||||||||||||| |||    
T  64099 tgctgagatcaactgaagatatcatcaaaagtttgattccaccagaagatcgtcattaggtagggtaaggtacattccaactacaacaattgtctt-cct 64197  T
Q  202 cttaaatggggtaattcaaacttgtcaaacg 232  Q
     || ||||  |||||||||||||| ||||||    
T  64198 -ttgaatgaagtaattcaaacttgccaaacg 64227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 88 - 231
Target Start/End: Original strand, 14604 - 14745
Alignment:
Q  88 tatgcgggtgacgctgctgagatcaactgaagatatcatcaaaagtttgattccgccagaagatcatcattagttagggtaaggtgcattccaactgcaa 187  Q
    |||| |||||| | |||| ||||||||| ||||| ||||||||||| |||| |||||| |||||| || ||||||||||||| ||||||||||||| |||    
T  14604 tatgtgggtgaagttgcttagatcaacttaagatttcatcaaaagtatgataccgccataagatcgtcgttagttagggtaacgtgcattccaactacaa 14703  T
Q  188 caattgtcttacctcttaaatggggtaattcaaacttgtcaaac 231  Q
    |||||||||| ||| || ||||||||||||||||||||||||||    
T  14704 caattgtctt-cct-ttgaatggggtaattcaaacttgtcaaac 14745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 289
Target Start/End: Complemental strand, 2504 - 2387
Alignment:
Q  171 gtgcattccaactgcaacaattgtcttacctcttaaatggggt-aattcaaacttgtcaaacggccagaactcaaacattttgctcggcattcatatttt 269  Q
    ||||||||||||| ||||||||||||||||| || |||||||| |||||||||||| ||||   | || |||||| ||||| || |||||||||| ||||    
T  2504 gtgcattccaactacaacaattgtcttacct-ttgaatggggtaaattcaaacttgccaaaaaacaag-actcaagcatttcgcccggcattcatgtttt 2407  T
Q  270 tcctttgaaaagattaaatt 289  Q
    ||||||||||||| ||||||    
T  2406 tcctttgaaaagaataaatt 2387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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