View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6208_high_1 (Length: 745)

Name: NF6208_high_1
Description: NF6208
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6208_high_1
NF6208_high_1
[»] chr3 (24 HSPs)
chr3 (20-733)||(12088711-12089420)
chr3 (81-448)||(33140278-33140645)
chr3 (106-432)||(46163837-46164162)
chr3 (80-333)||(32808267-32808524)
chr3 (106-432)||(3157679-3158004)
chr3 (111-448)||(45708469-45708807)
chr3 (81-343)||(26244858-26245119)
chr3 (198-438)||(55213977-55214217)
chr3 (81-332)||(2051586-2051835)
chr3 (106-343)||(26121976-26122213)
chr3 (380-448)||(12089289-12089357)
chr3 (251-448)||(36012582-36012780)
chr3 (197-330)||(43031238-43031374)
chr3 (311-448)||(33140505-33140643)
chr3 (81-176)||(36012686-36012782)
chr3 (382-448)||(26244860-26244926)
chr3 (106-175)||(46163844-46163914)
chr3 (311-448)||(26244163-26244301)
chr3 (81-149)||(12088989-12089057)
chr3 (311-419)||(26121982-26122091)
chr3 (81-152)||(33140276-33140347)
chr3 (374-448)||(2051759-2051833)
chr3 (371-448)||(43031128-43031205)
chr3 (99-176)||(7565750-7565828)
[»] chr7 (21 HSPs)
chr7 (93-423)||(35315869-35316199)
chr7 (198-448)||(47174-47424)
chr7 (81-349)||(33189882-33190148)
chr7 (193-349)||(7511169-7511323)
chr7 (82-330)||(25658388-25658634)
chr7 (81-271)||(32047233-32047422)
chr7 (106-448)||(26073168-26073510)
chr7 (81-152)||(36642607-36642678)
chr7 (371-448)||(25658389-25658466)
chr7 (106-448)||(26096955-26097297)
chr7 (241-328)||(527541-527628)
chr7 (311-438)||(35316071-35316199)
chr7 (79-181)||(47325-47428)
chr7 (371-448)||(7511081-7511158)
chr7 (81-152)||(7511079-7511150)
chr7 (358-448)||(32047235-32047325)
chr7 (380-448)||(36642609-36642677)
chr7 (81-175)||(26073417-26073512)
chr7 (81-175)||(26097204-26097299)
chr7 (358-421)||(32056869-32056932)
chr7 (374-448)||(21297715-21297789)
[»] chr8 (23 HSPs)
chr8 (81-333)||(41480624-41480875)
chr8 (212-448)||(5074381-5074618)
chr8 (218-349)||(18385825-18385956)
chr8 (81-349)||(42950443-42950710)
chr8 (106-423)||(38225459-38225776)
chr8 (218-335)||(11732709-11732826)
chr8 (85-335)||(42027059-42027308)
chr8 (220-424)||(23488724-23488928)
chr8 (212-335)||(42373332-42373455)
chr8 (264-335)||(16997211-16997282)
chr8 (81-214)||(5074487-5074620)
chr8 (358-446)||(42027220-42027308)
chr8 (108-291)||(34153370-34153551)
chr8 (358-419)||(38225709-38225770)
chr8 (358-448)||(23488972-23489062)
chr8 (358-427)||(34153487-34153555)
chr8 (81-152)||(16997093-16997164)
chr8 (106-152)||(23488993-23489039)
chr8 (358-448)||(41480783-41480873)
chr8 (106-152)||(7905658-7905704)
chr8 (108-188)||(23488845-23488927)
chr8 (106-152)||(38225457-38225503)
chr8 (371-448)||(11732595-11732672)
[»] chr2 (13 HSPs)
chr2 (81-432)||(26407419-26407770)
chr2 (104-448)||(36937527-36937869)
chr2 (197-423)||(29469542-29469770)
chr2 (218-349)||(29166806-29166937)
chr2 (107-175)||(29469541-29469610)
chr2 (106-188)||(26407426-26407510)
chr2 (256-335)||(25961197-25961276)
chr2 (358-448)||(26407678-26407768)
chr2 (106-151)||(36937801-36937846)
chr2 (358-418)||(18143985-18144045)
chr2 (371-442)||(25961089-25961160)
chr2 (311-349)||(29469746-29469784)
chr2 (380-438)||(36937516-36937574)
[»] chr1 (17 HSPs)
chr1 (212-419)||(27133982-27134190)
chr1 (108-328)||(34535316-34535535)
chr1 (197-438)||(49784533-49784773)
chr1 (117-427)||(33321071-33321381)
chr1 (195-330)||(23329417-23329552)
chr1 (212-423)||(4067009-4067220)
chr1 (358-439)||(27133830-27133911)
chr1 (371-438)||(34535301-34535368)
chr1 (374-448)||(2464202-2464276)
chr1 (108-152)||(2464207-2464251)
chr1 (104-176)||(23329319-23329392)
chr1 (269-446)||(38208261-38208438)
chr1 (93-145)||(38208522-38208574)
chr1 (93-156)||(49784817-49784880)
chr1 (358-448)||(2464056-2464146)
chr1 (106-152)||(4067176-4067222)
chr1 (311-340)||(33321146-33321175)
[»] chr6 (12 HSPs)
chr6 (81-350)||(67339-67607)
chr6 (211-448)||(16434806-16435043)
chr6 (81-330)||(10388218-10388466)
chr6 (81-333)||(30847624-30847875)
chr6 (371-448)||(67341-67418)
chr6 (311-448)||(30847626-30847764)
chr6 (375-447)||(3687627-3687699)
chr6 (81-151)||(16434804-16434873)
chr6 (197-259)||(30122746-30122807)
chr6 (84-152)||(3687627-3687695)
chr6 (251-297)||(30122481-30122527)
chr6 (106-175)||(30122817-30122887)
[»] chr5 (7 HSPs)
chr5 (108-421)||(36150761-36151073)
chr5 (212-448)||(13932689-13932926)
chr5 (198-331)||(20730450-20730585)
chr5 (82-214)||(13932795-13932927)
chr5 (199-340)||(8999644-8999787)
chr5 (371-446)||(20730617-20730692)
chr5 (358-395)||(22843906-22843943)
[»] chr4 (30 HSPs)
chr4 (106-335)||(4872571-4872797)
chr4 (81-332)||(51103364-51103614)
chr4 (198-335)||(34932173-34932309)
chr4 (104-448)||(22886419-22886766)
chr4 (104-448)||(22938083-22938430)
chr4 (165-334)||(45302440-45302607)
chr4 (90-438)||(35251394-35251742)
chr4 (139-335)||(43049156-43049351)
chr4 (93-349)||(4892397-4892650)
chr4 (195-440)||(54511429-54511671)
chr4 (193-321)||(40681566-40681693)
chr4 (196-338)||(42077134-42077276)
chr4 (81-176)||(39864090-39864186)
chr4 (358-448)||(39864092-39864182)
chr4 (371-441)||(33611234-33611304)
chr4 (371-448)||(51103366-51103443)
chr4 (311-423)||(4892412-4892525)
chr4 (81-180)||(51103633-51103733)
chr4 (371-438)||(40681721-40681788)
chr4 (106-152)||(35004497-35004543)
chr4 (81-149)||(22886417-22886485)
chr4 (81-149)||(22938081-22938149)
chr4 (112-152)||(42077056-42077096)
chr4 (81-144)||(4892689-4892752)
chr4 (81-131)||(5808246-5808296)
chr4 (374-448)||(35004474-35004548)
chr4 (358-423)||(35251412-35251477)
chr4 (106-151)||(35251684-35251729)
chr4 (106-151)||(40681730-40681775)
chr4 (309-350)||(42077249-42077290)
[»] scaffold0024 (2 HSPs)
scaffold0024 (285-439)||(70765-70920)
scaffold0024 (106-188)||(70822-70906)
[»] scaffold0081 (1 HSPs)
scaffold0081 (197-298)||(8565-8665)


Alignment Details
Target: chr3 (Bit Score: 510; Significance: 0; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 510; E-Value: 0
Query Start/End: Original strand, 20 - 733
Target Start/End: Complemental strand, 12089420 - 12088711
Alignment:
Q  20 aaaggtaaatcctctcggatgataaggagtctaaaaataattgttggataccttagtgaaggagtaaatcattaaatttgtctatatctttgtaccaaat 119  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||    
T  12089420 aaaggtaaatcctttaggatgataaggagtctaaaaataattgttggataccttagtgaaggagtaaatcattaaatttgtccatgtttttgtaccaaat 12089321  T
Q  120 tctcaaattggttcttgactctattaataactctaaaggtccctctctttgtcaaacatttt-cagattgattcccccgactctattagttatttttgta 218  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||    
T  12089320 tcttaaattggttcttgactctattaataactctaaaggtccctctctttgtcaaacatttttcagattgat-cccccgactctattagttgtttttgta 12089222  T
Q  219 ttttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagccattaacactcaaaataca 318  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||| | ||||||||||||||||||||    
T  12089221 ttttaagtcattaacgtatcaaataagattctaaaggcattatgacattaaccactaaataatatccaaaagacatttaaccattaacactcaaaataca 12089122  T
Q  319 aaacaactaatagagtcggggaccactctgaannnnnnn-gacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaagaatttgg 417  Q
    ||||||||||||||||||||||| | ||| ||        || ||| |||||||||||||| | ||||||| | ||||| |||||||||||| |||||||    
T  12089121 aaacaactaatagagtcggggactaatctaaaaaaattttgataaatacatgaaccattttgaattattaataaagtcagggaccaatttaaaaatttgg 12089022  T
Q  418 tacaaaaacatggactaatttaatgatttacccttagtaaaagattcaaatgaacaaggagtagaatgtaacccattaagaagaattaacggtgctaaga 517  Q
    ||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12089021 tacaaaaacatagaccaatttaatgatttactcttagtaaaagattcaaatgaacaaggagtagaatgtaacccattaagaagaattaacggtgctaaga 12088922  T
Q  518 gaagagctaagatgaatataatttaaagtaggaaatggtgagttaaggcacaaggtaaggttagaagtaattaaaatgacggggcaaaatgttaagtttc 617  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||      
T  12088921 gaagagctaagatgaatataatttaaattaggaaatggtgagttaaggcactaggtaaggttagaagtaattaaaatgatggggcgaaatgttaagtt-- 12088824  T
Q  618 ttcttaaagtatatagtaaaagtttgtagtggcataattggtgtagttatatggacgtaaatggtggtggtggtgttaatatatgaggtgagactattgt 717  Q
     |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  12088823 -tcttaatgtatatagtaaaagtttgtagtggcataactggtgtagttatatggacgtaaatggtggtggtggtgtta--atatgaggtgagactattgt 12088727  T
Q  718 taattatgatgatatt 733  Q
    ||||| ||||||||||    
T  12088726 taattttgatgatatt 12088711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 81 - 448
Target Start/End: Complemental strand, 33140645 - 33140278
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacatt 179  Q
    |||||||||| |||||| |||  | |||||||||||||| ||||||||| |   |||||||||||||||||| ||| |||| || |||||||||||||||    
T  33140645 gagtaaatcactaaattggtccttgtctttgtaccaaatgctcaaattgatctctgactctattaataactcaaaatggtcactgtctttgtcaaacatt 33140546  T
Q  180 t-tcagattgattcccccgactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaat 278  Q
    | |||||||| |  |||||||||| ||||||||||| ||||||||| |||||||| || ||||||||||   |||||||||||| |||||||   | |||    
T  33140545 tctcagattggt--ccccgactcttttagttatttt-gtattttaagtcattaacataccaaataagatcaaaaaggcattatgtcattaacggttaaat 33140449  T
Q  279 aatattcaaaagatattgagccattaacactcaaaatacaaaacaactaatagagtcggggaccactctg-aannnnnnngacaaagacatgaaccattt 377  Q
    ||||| ||||||| ||| || |||||||||||||||||||||| |||||||| ||| |  ||||| | || ||       ||||||||||  || |||||    
T  33140448 aatatccaaaagacattaagacattaacactcaaaatacaaaataactaataaagttgatgaccaatttgaaaaatgtttgacaaagacaaaaatcattt 33140349  T
Q  378 taagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    | ||||||||| |||||||   || |||||||||||||| |||||| |||||||| || ||||||||||||    
T  33140348 tgagttattaatagagtcagaaactaatttaagaatttgatacaaagacatggaccaaattaatgatttac 33140278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 106 - 432
Target Start/End: Complemental strand, 46164162 - 46163837
Alignment:
Q  106 tctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacattt-tcagattgattcccccgactcta 203  Q
    |||||||| |||||||||||||| || | |||||||||||||||||| ||| |||| || |||||||||||| ||| ||| |||| |  ||| |||||||    
T  46164162 tctttgtatcaaattctcaaattagtccctgactctattaataactcaaaatggtctctgtctttgtcaaacgtttctcatattggt--ccctgactcta 46164065  T
Q  204 ttagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagccatt 303  Q
    |||||| | || | |||||||  |||||||||| |||||||||| | |||| ||||||| ||||||| ||| |||||||| ||||||| |||||||||||    
T  46164064 ttagttgtatt-gcattttaagccattaacgtaccaaataagatccaaaagacattatgccattaactactaaataatatccaaaagacattgagccatt 46163966  T
Q  304 aacactcaaaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattttaagttattaacagagtcatggacc 402  Q
    ||||||||||||||||||||| ||||||||||  ||| || ||||| |       |||||||||| | |||||||| ||||||||| ||||||  |||||    
T  46163965 aacactcaaaatacaaaacaattaatagagtc-aggatcaatctgagaaacatttgacaaagacagggaccattttgagttattaatagagtcgcggacc 46163867  T
Q  403 aatttaagaatttggtacaaaaacatggac 432  Q
    || || ||||||||||||||| ||| ||||    
T  46163866 aaattgagaatttggtacaaagacagggac 46163837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 80 - 333
Target Start/End: Complemental strand, 32808524 - 32808267
Alignment:
Q  80 ggagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctatta--ataactctaaa-ggtccctctctttgtcaaac 176  Q
    |||||||||||  ||||| |||| | ||||||||||||| | |||||||||| |||| ||||||||  ||||||| ||| |||| || ||||||||||||    
T  32808524 ggagtaaatcaccaaattggtctctgtctttgtaccaaaatttcaaattggtccttggctctattatgataactcaaaatggtctctatctttgtcaaac 32808425  T
Q  177 attt-tcagattgattcccccgactctattagttatt--tttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccac 273  Q
     ||| |||||||| |  ||| ||||||||||||| ||  |||| |||||||  | ||||||||||||||||||| | |||| |||||||  |||||||||    
T  32808424 gtttctcagattggt--ccctgactctattagttgttgttttgcattttaagcccttaacgtatcaaataagatccaaaagacattatgctattaaccac 32808327  T
Q  274 tgaataatattcaaaagatattgagccattaacactcaaaatacaaaacaactaatagag 333  Q
    | |||||||| ||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  32808326 taaataatatccaaaagacattgaactattaacactcaaaatacaaaacaactaatagag 32808267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 106 - 432
Target Start/End: Complemental strand, 3158004 - 3157679
Alignment:
Q  106 tctttgtaccaaattctcaaattggttcttgactctattaataactctaaa--ggtccctctctttgtcaaacatttt-cagattgattcccccgactct 202  Q
    |||||||| ||||||||||||||  | | ||| ||||||||||| | ||||  |||| || ||||||||||||||||| |||||||||||     |||||    
T  3158004 tctttgtatcaaattctcaaattaatccatgattctattaataaatttaaaatggtctctgtctttgtcaaacatttttcagattgattcta---actct 3157908  T
Q  203 attagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagccat 302  Q
    ||||||| |||| | ||| |||  ||||||| || |||||||||| | |||| ||||||| |||||| |||| |||||||| ||||| | ||||| ||||    
T  3157907 attagttgtttt-gcattataagccattaacataccaaataagatccaaaagacattatgtcattaatcactaaataatatccaaaaaacattgaaccat 3157809  T
Q  303 taacactcaaaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattttaagttattaacagagtcatggac 401  Q
    |||||||||||||| ||||||| ||||||||||  |||||  ||||| |       |||||||| | |||||||||||| ||||||| ||||| ||||||    
T  3157808 taacactcaaaataaaaaacaattaatagagtc-aggaccgatctgagaaacatttgacaaagaaaagaaccattttaaattattaatagagttatggac 3157710  T
Q  402 caatttaagaatttggtacaaaaacatggac 432  Q
     ||  | ||||||||||||||| ||| ||||    
T  3157709 gaaactgagaatttggtacaaagacaaggac 3157679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 111 - 448
Target Start/End: Original strand, 45708469 - 45708807
Alignment:
Q  111 gtaccaaattctcaaattggttcttgactctattaataactctaaa--ggtccctctctttgtcaaacattt-tcagattgattcccccgactctattag 207  Q
    |||||||||| | ||||||||   | |||||||||||||||| |||  | | | | |||||||||||| ||| |||||||| |  | ||| |||||||||    
T  45708469 gtaccaaatttttaaattggtctctaactctattaataactcaaaaatgattcatgtctttgtcaaacgtttctcagattggt--ctccgtctctattag 45708566  T
Q  208 ttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagccattaaca 307  Q
    || |||| ||||||||| |||| |||||| |||||||||| | |||   |||||| ||||||| ||| ||||||||  |||||| |||||| ||||||||    
T  45708567 ttctttt-gtattttaagtcatcaacgtaccaaataagatccaaaaaaaattatgtcattaacgactaaataatatctaaaagacattgagtcattaaca 45708665  T
Q  308 ctcaaaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattttaagttattaacagagtcatggaccaatt 406  Q
     ||||||||||||||||||||| ||||| | ||||| | |||         ||||||||||    ||||||| ||||||||||| |||||  ||||||||    
T  45708666 gtcaaaatacaaaacaactaatcgagtcagagaccaatttgaggaacgtttgacaaagacagaggccattttgagttattaacatagtcagtgaccaatt 45708765  T
Q  407 taagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    ||| | ||| ||||||| |||||||| |||||||||||||||    
T  45708766 taaaattttagtacaaagacatggaccaatttaatgatttac 45708807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 81 - 343
Target Start/End: Original strand, 26244858 - 26245119
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacatt 179  Q
    |||||||| |||||||| |||  | ||||||||||||||| | |||||||| | |||||||||||||||  | ||| |||| || ||||||||||| |||    
T  26244858 gagtaaattattaaattggtcagtgtctttgtaccaaatttttaaattggtccatgactctattaataaaacaaaatggtctctgtctttgtcaaatatt 26244957  T
Q  180 t-tcagattgattcccccgactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaat 278  Q
    | |||||||| |  |   |||||||||| || |||| ||||||||| ||| ||| ||| |||||||||| | |||  ||||||| ||||||||||| |||    
T  26244958 tatcagattggt--cagtgactctattaattgtttt-gtattttaagtcactaatgtaccaaataagatccaaaaaacattatgtcattaaccactaaat 26245054  T
Q  279 aatattcaaaagatattgagccattaacactcaaaatacaaaacaactaatagagtcggggacca 343  Q
    ||||||||||||| |||||| ||||| || ||||||||| |||||| || ||||||  |||||||    
T  26245055 aatattcaaaagacattgagtcattaccattcaaaatacgaaacaattattagagttagggacca 26245119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 198 - 438
Target Start/End: Complemental strand, 55214217 - 55213977
Alignment:
Q  198 actctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattga 297  Q
    |||||||||||| |||| |||||| || | |||||| || |||||||||||| |||| |||||||  |||||||||| |||||||| ||||||| |||||    
T  55214217 actctattagttgtttt-gtatttgaagtgattaacataccaaataagattcaaaagacattatgttattaaccactaaataatatccaaaagacattga 55214119  T
Q  298 gccattaacactcaaaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattttaagttattaacagagtca 396  Q
      |||||||||||||||| |||||| |||||||||||||| ||||| | ||| |       ||||||||| |  |||||||| ||||||||| ||| |||    
T  55214118 atcattaacactcaaaatgcaaaaccactaatagagtcggagaccaatttgagaaacgtttgacaaagaccttgaccattttgagttattaatagattca 55214019  T
Q  397 tggaccaatttaagaatttggtacaaaaacatggactaattt 438  Q
       |||||||| | ||||||||||||| |||  |||||||||    
T  55214018 gataccaatttgaaaatttggtacaaagacagagactaattt 55213977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 81 - 332
Target Start/End: Complemental strand, 2051835 - 2051586
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacatt 179  Q
    |||||||||| |||||| ||||   | |||||| |||||| | |||||||| | ||||| |||||||||||| |||  |||||| | ||| |||||||||    
T  2051835 gagtaaatcactaaattggtctccgtttttgtatcaaatttttaaattggtccatgactttattaataactcaaaatagtccctgtttttatcaaacatt 2051736  T
Q  180 ttcagattgattcccccgactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaata 279  Q
    |||| |||| ||   || ||||||||| ||  |||||||||||||  |||||||||| |||||||||| | |||| |||||||  || ||||||| ||||    
T  2051735 ttcatattggtt--tccaactctattaatt-gttttgtattttaagccattaacgtaccaaataagatccaaaagacattatgttatcaaccactaaata 2051639  T
Q  280 atattcaaaagatattgagccattaacactcaaaatacaaaacaactaataga 332  Q
     |||  |||||  ||||| |||||||| |||||||||||||||||||||||||    
T  2051638 ttatctaaaaggcattgaaccattaaccctcaaaatacaaaacaactaataga 2051586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 106 - 343
Target Start/End: Original strand, 26121976 - 26122213
Alignment:
Q  106 tctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacattt-tcagattgattcccccgactcta 203  Q
    ||||| |||||||||||||||||||| | |||||||||||||||| | ||| |||  || |||||||||||  ||| | |||||| |  ||  |||||||    
T  26121976 tctttataccaaattctcaaattggtccatgactctattaataacacaaaatggtatctgtctttgtcaaatgtttcttagattggt--ccatgactcta 26122073  T
Q  204 ttagttatttttgtattttaaatcattaacgtatcaaataagattctaaagg-cattatgacattaaccactgaataatattcaaaagatattgagccat 302  Q
    |||||| |||| ||||||||||||||||| ||| |||||||||| | |||   || | |  ||||||||||| |||||||| ||||||| |||||| |||    
T  26122074 ttagttgtttt-gtattttaaatcattaatgtaccaaataagatccaaaaaaacactctctcattaaccactaaataatatccaaaagacattgagtcat 26122172  T
Q  303 taacactcaaaatacaaaacaactaatagagtcggggacca 343  Q
    || |||||||||||| |||||| || ||||||  |||||||    
T  26122173 taccactcaaaataccaaacaattattagagttagggacca 26122213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 380 - 448
Target Start/End: Original strand, 12089289 - 12089357
Alignment:
Q  380 agttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    ||||||||| ||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12089289 agttattaatagagtcaagaaccaatttaagaatttggtacaaaaacatggacaaatttaatgatttac 12089357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 251 - 448
Target Start/End: Original strand, 36012582 - 36012780
Alignment:
Q  251 aaaggcattatgacattaaccactgaataatattcaaaagatattgagccattaacactcaaaatacaaaacaactaatagagtcggggaccactctga- 349  Q
    |||| |||||||  |||||  ||| |||||||||||||||| |||||| |||||| ||||||||||||||||||||||||   || || |||| | |||     
T  36012582 aaagacattatgctattaatgactaaataatattcaaaagacattgagtcattaatactcaaaatacaaaacaactaataagatcaggaaccaatttgag 36012681  T
Q  350 annnnnnngacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    |       || ||||||| | |||||||| ||||||||| |||||||  || |||||| | ||||||||||||| |||  ||| |||||| ||||||||    
T  36012682 aaacgtttgaaaaagacagggaccattttgagttattaatagagtcagagatcaatttgataatttggtacaaagacagagaccaatttagtgatttac 36012780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 197 - 330
Target Start/End: Original strand, 43031238 - 43031374
Alignment:
Q  197 gactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattg 296  Q
    ||||||||||||| |||| | ||||||| ||||||| ||||||||||| |||| |||| |||||||  |||||||||| ||||||||   ||||||| ||    
T  43031238 gactctattagttgtttt-gcattttaagtcattaaagtatcaaataaaattcaaaagacattatgctattaaccactaaataatatcgcaaagatactg 43031336  T
Q  297 agcc----attaacactcaaaatacaaaacaactaata 330  Q
    | ||    ||||||| |||||||||||||||| |||||    
T  43031337 atccattaattaacattcaaaatacaaaacaattaata 43031374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 311 - 448
Target Start/End: Original strand, 33140505 - 33140643
Alignment:
Q  311 aaaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaa 409  Q
    ||||||||||| |||||| |||||||||||||| ||||| |       ||||||||||   |||||||| ||||||||| |||||||  || |||||| |    
T  33140505 aaaatacaaaataactaaaagagtcggggaccaatctgagaaatgtttgacaaagacagtgaccattttgagttattaatagagtcagagatcaatttga 33140604  T
Q  410 gaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    | |||||||||||| ||| |||| |||||| ||||||||    
T  33140605 gcatttggtacaaagacaaggaccaatttagtgatttac 33140643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 36012782 - 36012686
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaac 176  Q
    |||||||||| |||||| |||| | ||||||||||||||| |||||||| |   |||||||||||||||||| ||| ||||||| ||||| ||||||    
T  36012782 gagtaaatcactaaattggtctctgtctttgtaccaaattatcaaattgatctctgactctattaataactcaaaatggtccctgtctttttcaaac 36012686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 382 - 448
Target Start/End: Complemental strand, 26244926 - 26244860
Alignment:
Q  382 ttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    ||||||| |||||||||||||||||||| ||||||||||||| |||  ||| |||||||| ||||||    
T  26244926 ttattaatagagtcatggaccaatttaaaaatttggtacaaagacactgaccaatttaataatttac 26244860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 46163844 - 46163914
Alignment:
Q  106 tctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaa 175  Q
    |||||||||||||||||||| ||||| |  ||||||||||||||||| ||| ||||||| |||||||||||    
T  46163844 tctttgtaccaaattctcaatttggtccgcgactctattaataactcaaaatggtccctgtctttgtcaaa 46163914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 311 - 448
Target Start/End: Complemental strand, 26244301 - 26244163
Alignment:
Q  311 aaaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaa 409  Q
    |||||||||||||||||||||||||  |||||| ||||| |       ||||||||||   ||||||||  |||||||| ||||||||||| ||||||||    
T  26244301 aaaatacaaaacaactaatagagtcaaggaccaatctgagaaacattggacaaagacagagaccattttgtgttattaatagagtcatggatcaatttaa 26244202  T
Q  410 gaatttggtacaaaaacatggactaatttaatgatttac 448  Q
     |||||| |||||| |||   || |||||||| ||||||    
T  26244201 aaatttgttacaaagacagtaaccaatttaataatttac 26244163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 149
Target Start/End: Original strand, 12088989 - 12089057
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataa 149  Q
    ||||||||||||||||| |||||| | ||||||||||||| | |||||||| | ||||| |||||||||    
T  12088989 gagtaaatcattaaattggtctatgtttttgtaccaaatttttaaattggtccctgactttattaataa 12089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 419
Target Start/End: Complemental strand, 26122091 - 26121982
Alignment:
Q  311 aaaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaa 409  Q
    |||||||||||||||||||||||||  |||||| ||| | |       ||||||||||   ||||||||  |||||||| |||||||||||||||||| |    
T  26122091 aaaatacaaaacaactaatagagtcatggaccaatctaagaaacatttgacaaagacagataccattttgtgttattaatagagtcatggaccaatttga 26121992  T
Q  410 gaatttggta 419  Q
    ||||||||||    
T  26121991 gaatttggta 26121982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 152
Target Start/End: Original strand, 33140276 - 33140347
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactc 152  Q
    |||||||||||||| || ||| || |||||||| |||||||| ||||| |||  ||||||||||||||||||    
T  33140276 gagtaaatcattaatttggtccatgtctttgtatcaaattcttaaattagtttctgactctattaataactc 33140347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 374 - 448
Target Start/End: Original strand, 2051759 - 2051833
Alignment:
Q  374 attttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    ||||| ||||||||| | |||||||||||||||||| |||||| |||||||||   ||| |||||| ||||||||    
T  2051759 attttgagttattaataaagtcatggaccaatttaaaaatttgatacaaaaacggagaccaatttagtgatttac 2051833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 371 - 448
Target Start/End: Complemental strand, 43031205 - 43031128
Alignment:
Q  371 accattttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    |||||||||||||||||| ||||||   ||||||||||| |||||| ||||||  ||||||  ||||||| |||||||    
T  43031205 accattttaagttattaatagagtccgtgaccaatttaaaaatttgatacaaagtcatggatcaatttaacgatttac 43031128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 7565828 - 7565750
Alignment:
Q  99 gtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaac 176  Q
    |||| ||||| |||||||||||||||| |||||    |||| |||||||||||| ||| ||||| ||||||||||||||    
T  7565828 gtctttatctctgtaccaaattctcaatttggtctacgactttattaataactcaaaatggtccatctctttgtcaaac 7565750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 2e-57; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 93 - 423
Target Start/End: Complemental strand, 35316199 - 35315869
Alignment:
Q  93 aaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacattt-tcagattgat 190  Q
    ||||| |||| | ||||||||||||||||| |||||||| | |||||||||||||||||| ||| ||||||| ||||| |||||| ||| |||||||| |    
T  35316199 aaattagtctctgtctttgtaccaaattcttaaattggtccctgactctattaataactcaaaatggtccctgtctttctcaaacgtttctcagattggt 35316100  T
Q  191 tcccccgactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaag 290  Q
      |||  |||||||||||| |||| | ||||||| |||||||||||||||||||||| | |||||||||||| ||||||||||| || ||||| ||||||    
T  35316099 --ccctaactctattagttgtttt-gcattttaagtcattaacgtatcaaataagatccaaaaggcattatgtcattaaccactaaaaaatatccaaaag 35316003  T
Q  291 atattgagccattaacactcaaaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattttaagttattaac 389  Q
    | |||| | || ||||||||||||||||||||||||||||||||| |||| || ||||| |       |||||||||||  || ||||| |||||||||     
T  35316002 acattgggtcaataacactcaaaatacaaaacaactaatagagtcagggagcaatctgagaaacatttgacaaagacatagactattttgagttattaat 35315903  T
Q  390 agagtcatggaccaatttaagaatttggtacaaa 423  Q
    ||||||| ||||| | || | |||||||||||||    
T  35315902 agagtcagggaccgaattgacaatttggtacaaa 35315869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 198 - 448
Target Start/End: Original strand, 47174 - 47424
Alignment:
Q  198 actctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattga 297  Q
    |||||||||||| ||||  |||||||| |||||||||||||||||||||||| |||  ||||||  ||||||||||| ||||||||||||||||||||||    
T  47174 actctattagttgtttta-tattttaagtcattaacgtatcaaataagattcaaaatacattatatcattaaccactaaataatattcaaaagatattga 47272  T
Q  298 gccattaacactcaaaatacaaaacaactaatagagtcggggaccactctg-aannnnnnngacaaagacatgaaccattttaagttattaacagagtca 396  Q
    ||| ||||||||||||||||||||||||||||||| || ||||||| |||| ||       ||||||||||   | |||||| ||||||||| |||| ||    
T  47273 gccgttaacactcaaaatacaaaacaactaatagaatcagggaccaatctgaaaaatgttcgacaaagacagagatcattttgagttattaatagagaca 47372  T
Q  397 tggaccaatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
      ||||||||||| ||||||||||||| | |  ||| |||||||| ||||||    
T  47373 aagaccaatttaataatttggtacaaagatagagaccaatttaataatttac 47424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 81 - 349
Target Start/End: Original strand, 33189882 - 33190148
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacatt 179  Q
    ||||||| ||| ||| | |||| | |||||||||||| |||||||||||||  ||||||||||||||||||| ||| |||   | ||||| |||||  ||    
T  33189882 gagtaaaccatcaaactggtctctgtctttgtaccaacttctcaaattggtctttgactctattaataactcaaaatggtatttgtctttatcaaaagtt 33189981  T
Q  180 t-tcagattgattcccccgactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaat 278  Q
    | |||||||| |  ||| ||||||||||||| |||| | |||||||  | |||||||| |||||||||| | ||| | |||||| ||||||||||| |||    
T  33189982 tctcagattggt--ccctgactctattagttgtttt-gcattttaagcctttaacgtaccaaataagat-caaaatgtattatgccattaaccactaaat 33190077  T
Q  279 aatattcaaaagatattgagccattaacactcaaaatacaaaacaactaatagagtcggggaccactctga 349  Q
    ||||| ||||||| |||||| |||||||||| ||||||||||||||||||||||||| | ||||| |||||    
T  33190078 aatatccaaaagacattgagacattaacacttaaaatacaaaacaactaatagagtcagagaccaatctga 33190148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 193 - 349
Target Start/End: Complemental strand, 7511323 - 7511169
Alignment:
Q  193 ccccgactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagat 292  Q
    |||||| ||||||||||||||| ||||||||| |||||||||||| ||||||||||  ||| |||||||| ||||||| ||| |||||||||| |||||     
T  7511323 ccccgattctattagttatttt-gtattttaagtcattaacgtataaaataagatttaaaaagcattatgtcattaactactaaataatattc-aaagac 7511226  T
Q  293 attgagccattaacactcaaaatacaaaacaactaatagagtcggggaccactctga 349  Q
    ||||| | ||||||||| |||||||||||||| |||||||||  ||||||| |||||    
T  7511225 attgaactattaacacttaaaatacaaaacaattaatagagttagggaccaatctga 7511169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 82 - 330
Target Start/End: Original strand, 25658388 - 25658634
Alignment:
Q  82 agtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacattt 180  Q
    ||||||||| |||||| |||  |||||||||||||||||||||||||||| | ||||||| |||||||||| ||| ||||  | | |||||||||| |||    
T  25658388 agtaaatcagtaaattagtccctatctttgtaccaaattctcaaattggtccctgactctgttaataactcaaaatggtcattgtttttgtcaaacgttt 25658487  T
Q  181 -tcagattgattcccccgactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaata 279  Q
     |||||||| |  || ||||| ||||||||  |||||||||||||  || ||| ||| |||||||||| | |||  |||||||  |||| ||||| ||||    
T  25658488 atcagattgct--cctcgactttattagtt-gttttgtattttaagccactaaagtaccaaataagatccaaaacacattatgcaattatccactaaata 25658584  T
Q  280 atattcaaaagatattgagccattaacactcaaaatacaaaacaactaata 330  Q
    ||| ||||||||  ||||  ||||||||||||||||| |||||||||||||    
T  25658585 ata-tcaaaagacgttgaatcattaacactcaaaatataaaacaactaata 25658634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 81 - 271
Target Start/End: Original strand, 32047233 - 32047422
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacatt 179  Q
    ||||||||||  ||||| |||  ||||||||||||||||||||||||||||   |||||||||||||||||| ||| |||| || |||||||||||| ||    
T  32047233 gagtaaatcaccaaattggtccctatctttgtaccaaattctcaaattggtctctgactctattaataactcaaaatggtctctgtctttgtcaaacttt 32047332  T
Q  180 t-tcagattgattcccccgactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaacc 271  Q
    | ||| ||| ||| |||| ||||||||||||  |||||||||||||  |||||| ||| |||| ||| | | |||||||||||| ||||||||    
T  32047333 tctcatatt-att-ccccaactctattagtt-gttttgtattttaagccattaaggtaccaaaaaagttccaaaaggcattatgccattaacc 32047422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 106 - 448
Target Start/End: Original strand, 26073168 - 26073510
Alignment:
Q  106 tctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacattt-tcagattgattcccccgactcta 203  Q
    ||||||||||||||| ||||||||     | |||||||||||||||| ||| |||| || |||||||||||| ||| |||||||| |  ||| | |||||    
T  26073168 tctttgtaccaaattttcaaattgacctctaactctattaataactcaaaatggtcactttctttgtcaaacgtttctcagattggt--ccctgcctcta 26073265  T
Q  204 ttagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagccatt 303  Q
    |||||| |||| | |||||||  |||||||||| |||||||||| | |||||||||||  ||| ||||| | |||||||| ||||| |  ||||  |  |    
T  26073266 ttagttgtttt-gcattttaagccattaacgtaccaaataagatccaaaaggcattattccataaaccagtaaataatatccaaaacacgttgaatcgat 26073364  T
Q  304 aacactcaaaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattttaagttattaacagagtcatggacc 402  Q
    ||||||||||||||||||||| ||||| || | | ||||| ||| | |       ||||||||||   |||||||| | ||||||| ||||||| |||||    
T  26073365 aacactcaaaatacaaaacaattaataaaggcagagaccaatctaagaaacatttgacaaagacagagaccattttgaattattaatagagtcagggacc 26073464  T
Q  403 aatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    || || | ||||||||||||| |||  ||| ||||| ||| |||||    
T  26073465 aaattgaaaatttggtacaaagacagtgaccaatttgatggtttac 26073510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 81 - 152
Target Start/End: Original strand, 36642607 - 36642678
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactc 152  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  36642607 gagtaaatcattaaattggtctctatctttgtaccaaattttcaaattggtccctgactctattaataactc 36642678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 371 - 448
Target Start/End: Complemental strand, 25658466 - 25658389
Alignment:
Q  371 accattttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    |||||||| ||||||||||||||||| |||||||||| ||||||||||||||| | | ||||||||||| ||||||||    
T  25658466 accattttgagttattaacagagtcagggaccaatttgagaatttggtacaaagatagggactaatttactgatttac 25658389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 106 - 448
Target Start/End: Original strand, 26096955 - 26097297
Alignment:
Q  106 tctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacattt-tcagattgattcccccgactcta 203  Q
    ||||||||||||||| ||||||||     | |||||||||||||||| ||| |||| || |||||||||||| ||| ||| |||| |  ||| | |||||    
T  26096955 tctttgtaccaaattttcaaattgacctctaactctattaataactcaaaatggtcactttctttgtcaaacgtttctcaaattggt--ccctgcctcta 26097052  T
Q  204 ttagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagccatt 303  Q
    |||||| |||| | |||||||  |||||||||| |||||||||| | |||||||||||  ||| ||||| | |||||||| ||||| |  ||||  |  |    
T  26097053 ttagttgtttt-gcattttaagccattaacgtaccaaataagatccaaaaggcattattccataaaccagtaaataatatccaaaacacgttgaatcgat 26097151  T
Q  304 aacactcaaaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattttaagttattaacagagtcatggacc 402  Q
    ||||||||||||||||||||| ||||| || | | ||||| ||| | |       ||||||||||   |||||||| | ||||||| ||||||| |||||    
T  26097152 aacactcaaaatacaaaacaattaataaaggcagagaccaatctaagaaacatttgacaaagacagagaccattttgaattattaatagagtcagggacc 26097251  T
Q  403 aatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    || || | ||||||||||||| |||  ||| ||||| ||| |||||    
T  26097252 aaattgaaaatttggtacaaagacagtgaccaatttgatggtttac 26097297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 241 - 328
Target Start/End: Complemental strand, 527628 - 527541
Alignment:
Q  241 ataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagccattaacactcaaaatacaaaacaactaa 328  Q
    ||||||||| |||| | ||||| ||||||||||| ||||||||  |||| | |||||| |||||||||||||||||||||||||||||    
T  527628 ataagattcaaaagacgttatgtcattaaccactaaataatatctaaaaaacattgagtcattaacactcaaaatacaaaacaactaa 527541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 311 - 438
Target Start/End: Original strand, 35316071 - 35316199
Alignment:
Q  311 aaaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaa 409  Q
    ||||| ||||||||||||||||||  ||||||| ||||| |       || ||||||| | |||||||| ||||||||| ||||||| ||||||||||||    
T  35316071 aaaatgcaaaacaactaatagagttagggaccaatctgagaaacgtttgagaaagacagggaccattttgagttattaatagagtcagggaccaatttaa 35316170  T
Q  410 gaatttggtacaaaaacatggactaattt 438  Q
    |||||||||||||| |||  |||||||||    
T  35316171 gaatttggtacaaagacagagactaattt 35316199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 47428 - 47325
Alignment:
Q  79 aggagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaaca 177  Q
    |||||||||| |||||||| |||| ||||||||||||||||| | ||||||||  ||| ||||||||||||||| ||| | || || |||||||| ||||    
T  47428 aggagtaaattattaaattggtctctatctttgtaccaaattattaaattggtctttgtctctattaataactcaaaatgatctctgtctttgtcgaaca 47329  T
Q  178 tttt 181  Q
    ||||    
T  47328 tttt 47325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 371 - 448
Target Start/End: Complemental strand, 7511158 - 7511081
Alignment:
Q  371 accattttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    |||||||| |||||||||||||||||| ||||||||| ||||||||||||||| | | |||| ||||| ||| |||||    
T  7511158 accattttgagttattaacagagtcattgaccaatttgagaatttggtacaaagatagggaccaatttgatggtttac 7511081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 152
Target Start/End: Original strand, 7511079 - 7511150
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactc 152  Q
    ||||||| ||| ||||| |||  ||||||||||||||||||||||||||||   ||||||| ||||||||||    
T  7511079 gagtaaaccatcaaattggtccctatctttgtaccaaattctcaaattggtcaatgactctgttaataactc 7511150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 358 - 448
Target Start/End: Complemental strand, 32047325 - 32047235
Alignment:
Q  358 gacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    ||||||||||   |||||||| ||||||||| |||||||  ||||||||| ||||||||||||||| | | |||| |||||  ||||||||    
T  32047325 gacaaagacagagaccattttgagttattaatagagtcagagaccaatttgagaatttggtacaaagatagggaccaatttggtgatttac 32047235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 380 - 448
Target Start/End: Complemental strand, 36642677 - 36642609
Alignment:
Q  380 agttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    ||||||||| ||||||| |||||||||| | ||||||||||||| | |  ||| |||||||||||||||    
T  36642677 agttattaatagagtcagggaccaatttgaaaatttggtacaaagatagagaccaatttaatgatttac 36642609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 175
Target Start/End: Complemental strand, 26073512 - 26073417
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaa 175  Q
    ||||||| ||| ||||| |||  | ||||||||||||||| |||| ||||| | ||||||||||||||| || ||| |||| || |||||||||||    
T  26073512 gagtaaaccatcaaattggtcactgtctttgtaccaaattttcaatttggtccctgactctattaataattcaaaatggtctctgtctttgtcaaa 26073417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 175
Target Start/End: Complemental strand, 26097299 - 26097204
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaa 175  Q
    ||||||| ||| ||||| |||  | ||||||||||||||| |||| ||||| | ||||||||||||||| || ||| |||| || |||||||||||    
T  26097299 gagtaaaccatcaaattggtcactgtctttgtaccaaattttcaatttggtccctgactctattaataattcaaaatggtctctgtctttgtcaaa 26097204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 358 - 421
Target Start/End: Original strand, 32056869 - 32056932
Alignment:
Q  358 gacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaagaatttggtaca 421  Q
    ||||||||||  ||||||||||||||||||| | ||||  ||||||| || |||||||||||||    
T  32056869 gacaaagacagaaaccattttaagttattaataaagtccgggaccaaattgagaatttggtaca 32056932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 374 - 448
Target Start/End: Complemental strand, 21297789 - 21297715
Alignment:
Q  374 attttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    ||||| ||||||||| |||||||  ||| || |||||||||||||||||| ||| |||| ||||| ||| |||||    
T  21297789 attttgagttattaatagagtcagagactaaattaagaatttggtacaaagacagggaccaatttgatggtttac 21297715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 3e-56; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 81 - 333
Target Start/End: Complemental strand, 41480875 - 41480624
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacatt 179  Q
    ||||||||||| || || |||  ||||||||||||||||||||| |||| | | ||||| |||||||||||| ||| |||  || |||||||||||||||    
T  41480875 gagtaaatcatcaatttagtccctatctttgtaccaaattctcatattgttccctgactttattaataactcaaaatggttactgtctttgtcaaacatt 41480776  T
Q  180 tt-cagattgattcccccgactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaat 278  Q
    || || ||||||  ||  ||||||||||||| |||| ||||||||| ||||||||||| |||||||||||| ||||  |||||| ||||||||||| |||    
T  41480775 tttcatattgat--ccttgactctattagttgtttt-gtattttaagtcattaacgtaccaaataagattcgaaagatattatgccattaaccactaaat 41480679  T
Q  279 aatattcaaaagatattgagccattaacactcaaaatacaaaacaactaatagag 333  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  41480678 aatattcaaaagacattgagtcattaacactcaaaatacaaaacaactaatagag 41480624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 212 - 448
Target Start/End: Original strand, 5074381 - 5074618
Alignment:
Q  212 ttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagccattaacactca 311  Q
    |||||||||||||| |||||||||| |||||| |||    ||||||||||| ||||||||||  |||||||| ||||||| |||||| ||||||||||||    
T  5074381 ttttgtattttaaaccattaacgtaccaaatatgatcgagaaggcattatgccattaaccaccaaataatatccaaaagacattgagtcattaacactca 5074480  T
Q  312 aaatacaaaacaactaatagagtcggggaccactctg-aannnnnnngacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaag 410  Q
    |||||||||||||||||||||||| || |||| |||| ||       |||||||||| | |||||||| ||||||||| |||| || |||||||||| ||    
T  5074481 aaatacaaaacaactaatagagtcaggaaccaatctgaaaaacatttgacaaagacagggaccattttgagttattaatagagacagggaccaatttgag 5074580  T
Q  411 aatttggtacaaaaacatggactaatttaatgatttac 448  Q
    ||||||||||||| | |||||  ||||| ||| |||||    
T  5074581 aatttggtacaaagatatggatcaatttgatggtttac 5074618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 218 - 349
Target Start/End: Complemental strand, 18385956 - 18385825
Alignment:
Q  218 attttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagccattaacactcaaaatac 317  Q
    ||||||||||||||| ||| |||||||||||| |||| ||||||| ||||||||||| ||||||||||||||||||||||| |||||||||| |||||||    
T  18385956 attttaaatcattaatgtaccaaataagattcaaaagacattatgtcattaaccactaaataatattcaaaagatattgagtcattaacacttaaaatac 18385857  T
Q  318 aaaacaactaatagagtcggggaccactctga 349  Q
    ||||||| |||| |||| |||||||| |||||    
T  18385856 aaaacaattaatggagttggggaccaatctga 18385825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 81 - 349
Target Start/End: Complemental strand, 42950710 - 42950443
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacatt 179  Q
    ||||||| ||| | ||| |||||| ||||||||  ||||| | |||| |||   |||||||||||||||||| ||| ||||  | |||||||||||||||    
T  42950710 gagtaaaccatcagattagtctatgtctttgtattaaatttttaaataggtctctgactctattaataactcaaaatggtcattgtctttgtcaaacatt 42950611  T
Q  180 t-tcagattgattcccccgactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaat 278  Q
    | ||| ||||||  | | ||||||||||||| ||||   ||||||| | |||||||||||||||||||| | |||| |||||||  |||| ||||| |||    
T  42950610 tctcatattgat--ctctgactctattagttgttttac-attttaagttattaacgtatcaaataagatccaaaagacattatgttattagccactaaat 42950514  T
Q  279 aatattcaaaagatattgagccattaacactcaaaatacaaaacaactaatagagtcggggaccactctga 349  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||| ||| |||||  ||||||| |||||    
T  42950513 aatattcaaaagacattgaaccattaacactcaaaatacaaaacaattaacagagttagggaccaatctga 42950443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 106 - 423
Target Start/End: Complemental strand, 38225776 - 38225459
Alignment:
Q  106 tctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacattt-tcagattgattcccccgactcta 203  Q
    ||||| ||||||||| |||||||||| | ||||||||||||||| |  ||| ||| | | |||||||||||||||  ||| |||| |  ||| |||||||    
T  38225776 tctttataccaaattatcaaattggtccctgactctattaataatttaaaatggttcatgtctttgtcaaacattcctcatattggt--ccctgactcta 38225679  T
Q  204 ttagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagccatt 303  Q
    ||| || |||| | ||||||| ||||| ||| | |||||| ||| | ||||| |||||| ||||||| |||||||||||| ||||||| |||||||||||    
T  38225678 ttatttgtttt-gcattttaagtcattgacgcaccaaataggatccaaaaggtattatgtcattaacaactgaataatatccaaaagacattgagccatt 38225580  T
Q  304 aacactcaaaatacaaaacaactaatagagtcggggaccactctg-aannnnnnngacaaagacatgaaccattttaagttattaacagagtcatggacc 402  Q
    |||||| ||||| ||||||||||||||||||| | ||||| |||| ||       |||||| ||    |||||||| ||||||||| ||||| | |||||    
T  38225579 aacacttaaaatgcaaaacaactaatagagtcagagaccaatctgaaaaatatttgacaaataccaagaccattttgagttattaatagagtaagggacc 38225480  T
Q  403 aatttaagaatttggtacaaa 423  Q
    || || |||||||||||||||    
T  38225479 aaattgagaatttggtacaaa 38225459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 218 - 335
Target Start/End: Complemental strand, 11732826 - 11732709
Alignment:
Q  218 attttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagccattaacactcaaaatac 317  Q
    |||||||  |||||||||| |||||||||| | ||| |||||||| ||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||    
T  11732826 attttaagccattaacgtaccaaataagatccaaaatgcattatgccattaaccactaaataatattcaaatgatattgagtcattaacactcaaaatac 11732727  T
Q  318 aaaacaactaatagagtc 335  Q
    |||||||| |||||||||    
T  11732726 aaaacaacaaatagagtc 11732709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 85 - 335
Target Start/End: Complemental strand, 42027308 - 42027059
Alignment:
Q  85 aaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacattt-tc 182  Q
    |||||| |||||| |||  | ||||| ||| ||||||| ||||||||   |||||||||||||||||  ||| ||| | | |||||||||||  ||| ||    
T  42027308 aaatcactaaattagtcattgtctttatacaaaattcttaaattggtctctgactctattaataacttaaaatggttcttgtctttgtcaaatctttctc 42027209  T
Q  183 agattgattcccccgactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataata 282  Q
    | ||||||  |||| ||||||||| ||  |||  |||||||| ||||||| |||||||||||||| | |||||||||||| ||| ||||||| |||||||    
T  42027208 aaattgat--ccccaactctattaattgattta-tattttaagtcattaatgtatcaaataagatccaaaaggcattatgtcataaaccactaaataata 42027112  T
Q  283 ttcaaaagatattgagccattaacactcaaaatacaaaacaactaatagagtc 335  Q
    | ||||||| |||||| |||||| |||||||||||||||||| ||||||||||    
T  42027111 tccaaaagacattgagtcattaaaactcaaaatacaaaacaattaatagagtc 42027059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 220 - 424
Target Start/End: Original strand, 23488724 - 23488928
Alignment:
Q  220 tttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagccattaacactcaaaatacaa 319  Q
    ||||| ||||||||||||||||||||||   |||  ||||||| || |||||||| |||||||| ||||||| |||||| ||||||||||||||||||||    
T  23488724 tttaagtcattaacgtatcaaataagatctaaaaaccattatgtcactaaccactaaataatatccaaaagacattgagtcattaacactcaaaatacaa 23488823  T
Q  320 aacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaagaatttggt 418  Q
    ||| ||||||||||||  |||||| ||||| |       ||||||||||   |||||||| | ||||| | ||||||| |||||||||| ||||||||||    
T  23488824 aac-actaatagagtcaaggaccaatctgagaaatatttgacaaagacagagaccattttgaattattcatagagtcagggaccaatttgagaatttggt 23488922  T
Q  419 acaaaa 424  Q
     |||||    
T  23488923 tcaaaa 23488928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 212 - 335
Target Start/End: Original strand, 42373332 - 42373455
Alignment:
Q  212 ttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagccattaacactca 311  Q
    ||||||||||||| |||||||| |||||||||| || | |||| ||||||  ||| ||||| | ||||||||| |||| ||||||| |||||||||||||    
T  42373332 ttttgtattttaagtcattaacatatcaaataacatccaaaagacattattccatgaaccattaaataatatttaaaaaatattgaaccattaacactca 42373431  T
Q  312 aaatacaaaacaactaatagagtc 335  Q
    |||||| |||||| ||||||||||    
T  42373432 aaatactaaacaagtaatagagtc 42373455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 16997282 - 16997211
Alignment:
Q  264 cattaaccactgaataatattcaaaagatattgagccattaacactcaaaatacaaaacaactaatagagtc 335  Q
    ||||||||||| |||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||    
T  16997282 cattaaccactaaataatattcaaaagacattgaaccattaaaactcaaaatacaaaacaactaatagagtc 16997211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 81 - 214
Target Start/End: Complemental strand, 5074620 - 5074487
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaa-cat 178  Q
    ||||||| ||| |||||  || ||||||||||||||||||||||||||||| | || ||||||||||||||| ||| ||||||| |||||||||||   |    
T  5074620 gagtaaaccatcaaattgatccatatctttgtaccaaattctcaaattggtccctgtctctattaataactcaaaatggtccctgtctttgtcaaatgtt 5074521  T
Q  179 tttcagattgattcccccgactctattagttatttt 214  Q
    |||||||||| ||  || ||||||||||||| ||||    
T  5074520 tttcagattggtt--cctgactctattagttgtttt 5074487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 358 - 446
Target Start/End: Original strand, 42027220 - 42027308
Alignment:
Q  358 gacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgattt 446  Q
    |||||||||| |||||||||||||||||||| |||||||  ||||||||||||||||| ||| ||| |||  |||||||||| ||||||    
T  42027220 gacaaagacaagaaccattttaagttattaatagagtcagagaccaatttaagaattttgtataaagacaatgactaatttagtgattt 42027308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 108 - 291
Target Start/End: Complemental strand, 34153551 - 34153370
Alignment:
Q  108 tttgtaccaaattctcaaattggttcttgactctattaataactctaaaggtccctctctttgtcaaacattt-tcagattgattcccccgactctatta 206  Q
    ||||||||||||| ||||||||||   |||||||||||||||||| ||| |    | |||||||||||| ||| ||| |||| |||    ||||||||||    
T  34153551 tttgtaccaaattatcaaattggtctatgactctattaataactcaaaatgattatgtctttgtcaaacgtttctcaaattggttctt--gactctatta 34153454  T
Q  207 gttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaaga 291  Q
     || |||| | |||||||  |||||| |||||||||||||| | ||| |||||||| ||||||||||| |||||||| |||||||    
T  34153453 attgtttt-gcattttaagccattaatgtatcaaataagatccaaaatgcattatgccattaaccactaaataatatccaaaaga 34153370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 358 - 419
Target Start/End: Original strand, 38225709 - 38225770
Alignment:
Q  358 gacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaagaatttggta 419  Q
    ||||||||||||||||||||||| ||||||| ||||||| |||||||||| | |||||||||    
T  38225709 gacaaagacatgaaccattttaaattattaatagagtcagggaccaatttgataatttggta 38225770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 358 - 448
Target Start/End: Original strand, 23488972 - 23489062
Alignment:
Q  358 gacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    ||||||||||   |||||||| ||||||| | |||||||||||||||||| ||||||||||||||| ||| |||  |||||  ||||||||    
T  23488972 gacaaagacaatgaccattttgagttattcatagagtcatggaccaatttgagaatttggtacaaagacaaggatcaatttggtgatttac 23489062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 358 - 427
Target Start/End: Original strand, 34153487 - 34153555
Alignment:
Q  358 gacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaaca 427  Q
    ||||||||||| || |||||| ||||||||| |||||||| ||||||||| | |||||||||||||||||    
T  34153487 gacaaagacat-aatcattttgagttattaatagagtcatagaccaatttgataatttggtacaaaaaca 34153555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 152
Target Start/End: Original strand, 16997093 - 16997164
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactc 152  Q
    ||||||| ||| ||||| |||  ||||||||||||||||| |||| ||||||| | ||||||||||||||||    
T  16997093 gagtaaaccatcaaattggtccctatctttgtaccaaattatcaatttggttcctaactctattaataactc 16997164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 23489039 - 23488993
Alignment:
Q  106 tctttgtaccaaattctcaaattggttcttgactctattaataactc 152  Q
    |||||||||||||||||||||||||| | ||||||||| ||||||||    
T  23489039 tctttgtaccaaattctcaaattggtccatgactctatgaataactc 23488993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 358 - 448
Target Start/End: Original strand, 41480783 - 41480873
Alignment:
Q  358 gacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    ||||||||||  ||||||||| ||||||||| | ||||| ||| |||| | ||||||||||||||| | | ||||||| || |||||||||    
T  41480783 gacaaagacagtaaccattttgagttattaataaagtcagggaacaatatgagaatttggtacaaagatagggactaaattgatgatttac 41480873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 7905658 - 7905704
Alignment:
Q  106 tctttgtaccaaattctcaaattggttcttgactctattaataactc 152  Q
    ||||||||||||||| ||||||| || | ||||||||||||||||||    
T  7905658 tctttgtaccaaattttcaaattagtccctgactctattaataactc 7905704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 23488927 - 23488845
Alignment:
Q  108 tttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacattt-tcagattg 188  Q
    |||| ||||||||||||||||||| | ||||||||| ||||| || ||| |||| || ||||||||||| |||| ||||||||    
T  23488927 tttgaaccaaattctcaaattggtccctgactctatgaataattcaaaatggtctctgtctttgtcaaatatttctcagattg 23488845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 38225457 - 38225503
Alignment:
Q  106 tctttgtaccaaattctcaaattggttcttgactctattaataactc 152  Q
    |||||||||||||||||||| ||||| | | ||||||||||||||||    
T  38225457 tctttgtaccaaattctcaatttggtcccttactctattaataactc 38225503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 371 - 448
Target Start/End: Complemental strand, 11732672 - 11732595
Alignment:
Q  371 accattttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    |||||||| | ||||||| |||||||  |||||| || | ||||||||||||| ||||| |||||||| ||| |||||    
T  11732672 accattttgaattattaatagagtcagtgaccaaattgaaaatttggtacaaagacatgtactaatttgatggtttac 11732595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 1e-55; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 81 - 432
Target Start/End: Complemental strand, 26407770 - 26407419
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacatt 179  Q
    ||||||||||| || || |||  | ||||||||||||||| ||| |||||| | ||||||||||||||| || ||| ||||||| |||||||||| ||||    
T  26407770 gagtaaatcatcaatttagtccctgtctttgtaccaaattttcatattggtccctgactctattaataattcaaaatggtccctgtctttgtcaatcatt 26407671  T
Q  180 tt-cagattgattcccccgactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaat 278  Q
    || ||  |||||  ||  ||||||||||||| |||| ||||||||| | ||||||||| |||||||||| | ||||||||||   ||||||||||| |||    
T  26407670 tttcatgttgat--ccttgactctattagttgtttt-gtattttaagttattaacgtaccaaataagatccgaaaggcattagaccattaaccactaaat 26407574  T
Q  279 aatattcaaaagatattgagccattaacactcaaaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattt 377  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |  |||||| ||||| |       |||||||||| | |||||||    
T  26407573 aatattcaaaagatattgaaccattaacactcaaaatacaaatcaactaatagagacatggaccaatctgagaaaagtttgacaaagacagggaccattt 26407474  T
Q  378 taagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggac 432  Q
    | ||||||||| ||||||    |||||||| | ||||||||||||| ||||||||    
T  26407473 tgagttattaatagagtctgaaaccaatttgaaaatttggtacaaagacatggac 26407419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 104 - 448
Target Start/End: Original strand, 36937527 - 36937869
Alignment:
Q  104 tatctttgtaccaaattctcaaattggttcttgactctattaataactctaaaggtccctctctttgtcaaacattt-tcagattgattcccccgactct 202  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||| || ||||  | |||||||||||||||| | |||||| | |    ||||||    
T  36937527 tatctttgtaccaaattctcaaattggtctctgactctattaataactc-aatggtctttgtctttgtcaaacatttcttagattggtactt--gactct 36937623  T
Q  203 attagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagccat 302  Q
    ||||||| |||| | |||||||  ||| |||||| |||||||||| | |||||||||||| ||||||||||| ||||||||  |||||||| |||| |||    
T  36937624 attagttgtttt-gcattttaagccatcaacgtaccaaataagatccaaaaggcattatgtcattaaccactaaataatatctaaaagatactgagtcat 36937722  T
Q  303 taacactcaaaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattttaagttattaacagagtcatggac 401  Q
    ||||||||||||||||||||||||||||||||| |||| || | ||| |        |||||||||   |||||||| ||||||||| ||||||| ||||    
T  36937723 taacactcaaaatacaaaacaactaatagagtcagggatcaatttgagaaacatttcacaaagacagagaccattttcagttattaatagagtcaaggac 36937822  T
Q  402 caatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    ||| || ||||||||||||||| ||| | || ||||| ||| |||||    
T  36937823 caaattgagaatttggtacaaagacaagaaccaatttgatggtttac 36937869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 197 - 423
Target Start/End: Complemental strand, 29469770 - 29469542
Alignment:
Q  197 gactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattg 296  Q
    ||||||||||||| |||| ||||||||| ||||||||||||||||||||||   |||| ||||||| ||||||||||| |||||||| ||||||| ||||    
T  29469770 gactctattagttgtttt-gtattttaagtcattaacgtatcaaataagatcgaaaagacattatgtcattaaccactaaataatatccaaaagacattg 29469672  T
Q  297 agccattaacactcaaaatacaaaacaactaatagagtc--ggggaccactctga-annnnnnngacaaagacatgaaccattttaagttattaacagag 393  Q
    || ||||||||||||||||||||||||| ||||||||||  |||||| | ||||| |       ||||||||||   |||||||| ||||||||| ||||    
T  29469671 agtcattaacactcaaaatacaaaacaattaatagagtcagggggactaatctgagaaacatttgacaaagacagcgaccattttgagttattaatagag 29469572  T
Q  394 tcatggaccaatttaagaatttggtacaaa 423  Q
    |||  ||||||||| |||||||||||||||    
T  29469571 tcaatgaccaatttgagaatttggtacaaa 29469542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 218 - 349
Target Start/End: Complemental strand, 29166937 - 29166806
Alignment:
Q  218 attttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagccattaacactcaaaatac 317  Q
    ||||||| |||||||||||  ||||||||| | |||||||||||  ||||||||||| |||||||||||||||| ||| || ||||||||||| ||||||    
T  29166937 attttaagtcattaacgtactaaataagatccaaaaggcattataccattaaccactaaataatattcaaaagacattaagtcattaacactcgaaatac 29166838  T
Q  318 aaaacaactaatagagtcggggaccactctga 349  Q
    ||||||||||||||| || ||| ||| |||||    
T  29166837 aaaacaactaatagactcagggcccaatctga 29166806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 29469541 - 29469610
Alignment:
Q  107 ctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaa 175  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||| |||| || |||||||||||    
T  29469541 ctttgtaccaaattctcaaattggtcattgactctattaataactcaaaatggtcgctgtctttgtcaaa 29469610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 106 - 188
Target Start/End: Original strand, 26407426 - 26407510
Alignment:
Q  106 tctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacattt-tcagattg 188  Q
    ||||||||||||||| |||||||||||   ||||||||||||||||| ||| ||||||| |||||||||||| ||| ||||||||    
T  26407426 tctttgtaccaaattttcaaattggtttcagactctattaataactcaaaatggtccctgtctttgtcaaacttttctcagattg 26407510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 256 - 335
Target Start/End: Complemental strand, 25961276 - 25961197
Alignment:
Q  256 cattatgacattaaccactgaataatattcaaaagatattgagccattaacactcaaaatacaaaacaactaatagagtc 335  Q
    ||||||| ||||||||||| ||||||||  |||| | ||||||||||||||||| | | |||||||||| ||||||||||    
T  25961276 cattatgtcattaaccactaaataatatctaaaaaacattgagccattaacacttacagtacaaaacaattaatagagtc 25961197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 358 - 448
Target Start/End: Original strand, 26407678 - 26407768
Alignment:
Q  358 gacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    |||||||||| | |||||||| | ||||||| ||||||| |||||||| | | ||||||||||||| ||| ||||||| || |||||||||    
T  26407678 gacaaagacagggaccattttgaattattaatagagtcagggaccaatatgaaaatttggtacaaagacagggactaaattgatgatttac 26407768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 36937846 - 36937801
Alignment:
Q  106 tctttgtaccaaattctcaaattggttcttgactctattaataact 151  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||    
T  36937846 tctttgtaccaaattctcaatttggtccttgactctattaataact 36937801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 358 - 418
Target Start/End: Original strand, 18143985 - 18144045
Alignment:
Q  358 gacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaagaatttggt 418  Q
    |||||| |||||||||||||| ||||||||| |||||||  ||||||||||| ||||||||    
T  18143985 gacaaaaacatgaaccattttgagttattaatagagtcagagaccaatttaaaaatttggt 18144045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 371 - 442
Target Start/End: Complemental strand, 25961160 - 25961089
Alignment:
Q  371 accattttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatg 442  Q
    |||||||||||||||||| |||||||||||  ||||||||| |||  ||||||  || |||| |||||||||    
T  25961160 accattttaagttattaatagagtcatggataaatttaagattttaatacaaagtcagggaccaatttaatg 25961089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 311 - 349
Target Start/End: Original strand, 29469746 - 29469784
Alignment:
Q  311 aaaatacaaaacaactaatagagtcggggaccactctga 349  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  29469746 aaaatacaaaacaactaatagagtcagggaccaatctga 29469784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 438
Target Start/End: Complemental strand, 36937574 - 36937516
Alignment:
Q  380 agttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaattt 438  Q
    ||||||||| |||||||  ||||||||| ||||||||||||||| | | ||||||||||    
T  36937574 agttattaatagagtcagagaccaatttgagaatttggtacaaagatagggactaattt 36937516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 4e-49; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 212 - 419
Target Start/End: Original strand, 27133982 - 27134190
Alignment:
Q  212 ttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagccattaacactca 311  Q
    ||||| ||||||| ||||||||||| |||||||||| | |||| ||||||| ||||||||||| |||||||| ||||| | |||||| ||||||||||||    
T  27133982 ttttgcattttaagtcattaacgtaccaaataagatccaaaagacattatgccattaaccactaaataatatccaaaatacattgagtcattaacactca 27134081  T
Q  312 aaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaag 410  Q
    |||||||||||||||||||||||| | ||||| ||||| |       ||||||||||||||||||||| ||||||||| |||||||  |||||||||||     
T  27134082 aaatacaaaacaactaatagagtcagagaccaatctgagaaacatttgacaaagacatgaaccattttgagttattaatagagtcaaagaccaatttaaa 27134181  T
Q  411 aatttggta 419  Q
    |||||||||    
T  27134182 aatttggta 27134190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 108 - 328
Target Start/End: Original strand, 34535316 - 34535535
Alignment:
Q  108 tttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacattt-tcagattgattcccccgactctatt 205  Q
    ||||||||||||| ||||||| || |||||||||||||||||||  ||| |||| ||   |||||||||| ||| ||| |||| |  ||| |||| ||||    
T  34535316 tttgtaccaaattttcaaattagtccttgactctattaataacttaaaatggtcactgaatttgtcaaacgtttctcaaattggt--ccctgactgtatt 34535413  T
Q  206 agttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagccattaa 305  Q
    ||||||||| | ||||||||||||||||||| |||||||||||| ||| | || ||  ||||||||||| |||||||||||||||| |||||||||||||    
T  34535414 agttatttt-gcattttaaatcattaacgtaccaaataagattcaaaaagtatcatatcattaaccactaaataatattcaaaagacattgagccattaa 34535512  T
Q  306 cactcaaaatacaaaacaactaa 328  Q
    |||||||||||||||||||||||    
T  34535513 cactcaaaatacaaaacaactaa 34535535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 197 - 438
Target Start/End: Complemental strand, 49784773 - 49784533
Alignment:
Q  197 gactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattg 296  Q
    ||||||||||||| |||||  ||||||| |||||||||||   |||||||||| |||| ||||||| |||||||||||  ||||||||||||| | ||||    
T  49784773 gactctattagttttttttacattttaagtcattaacgtacttaataagattcaaaagacattatgccattaaccactacataatattcaaaacacattg 49784674  T
Q  297 agccattaacactcaaaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattttaagttattaacagagtc 395  Q
    | |||| |||||||||||||||||||||||||| ||||| ||||||| ||||| |       |||||||||||  |||||||| ||||||||| ||||||    
T  49784673 aaccatcaacactcaaaatacaaaacaactaattgagtcagggaccaatctgagaaacacttgacaaagacat--accattttgagttattaatagagtc 49784576  T
Q  396 atggaccaatttaagaatttggtacaaaaacatggactaattt 438  Q
    | |||| || || | ||||| ||||||| ||| ||||||||||    
T  49784575 agggactaaattgaaaatttagtacaaagacagggactaattt 49784533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 117 - 427
Target Start/End: Original strand, 33321071 - 33321381
Alignment:
Q  117 aattctcaaattggttcttgactctattaataactctaaagg-tccctctctttgtcaaacattt-tcagattgattcccccgactctattagttatttt 214  Q
    |||||||||||||||  |||||||||||||||| |  ||| | || || |||||||||||||||| | | ||||||  ||||||||||||||||| ||||    
T  33321071 aattctcaaattggtcattgactctattaataatttaaaatgatctctgtctttgtcaaacatttcttatattgat--ccccgactctattagttgtttt 33321168  T
Q  215 tgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagccattaacactcaaaa 314  Q
     ||||||||| ||||||||||| ||||||| |||| |||||||| ||| ||||||| | | |||||||| ||||||| | |||| ||||| |||||||||    
T  33321169 -gtattttaagtcattaacgtaccaaataaaattcaaaaggcatcatgtcattaacgattaaataatatccaaaagacaatgagtcattatcactcaaaa 33321267  T
Q  315 tacaaaacaactaatagagtcggggaccactctg-aannnnnnngacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaagaat 413  Q
    |||||||||| |||||||| |   ||||| | || ||       ||||||||| || || ||||| ||||||||| |||||||   |||||||||| |||    
T  33321268 tacaaaacaaataatagagacaatgaccaatttgaaaaaagtttgacaaagacgtggactattttgagttattaatagagtcagaaaccaatttaaaaat 33321367  T
Q  414 ttggtacaaaaaca 427  Q
    ||||||||||||||    
T  33321368 ttggtacaaaaaca 33321381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 195 - 330
Target Start/End: Complemental strand, 23329552 - 23329417
Alignment:
Q  195 ccgactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatat 294  Q
    |||||||||||||||  ||||||||||||||||||||| ||| |||||||||| | |||||||||||| ||||||||||| |||||||||| ||||| ||    
T  23329552 ccgactctattagtttcttttgtattttaaatcattaatgtaccaaataagatccaaaaggcattatgtcattaaccactaaataatattctaaagacat 23329453  T
Q  295 tgagccattaacactcaaaatacaaaacaactaata 330  Q
    ||| | ||||||||| ||||||||||||||||||||    
T  23329452 tgaactattaacactaaaaatacaaaacaactaata 23329417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 212 - 423
Target Start/End: Original strand, 4067009 - 4067220
Alignment:
Q  212 ttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagccattaacactca 311  Q
    ||||||||||||| ||||||||||| |||||||||| | |||| ||||||| |||| || ||  |||||||| ||||||| |||||||||||||||||||    
T  4067009 ttttgtattttaagtcattaacgtaccaaataagatccaaaagacattatgtcatttactacgaaataatatccaaaagacattgagccattaacactca 4067108  T
Q  312 aaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaag 410  Q
    ||||| ||||||| ||| ||||||  |||||| ||||| |       ||||||||| || |||||||| ||||||||| |||||||  |||||||||||     
T  4067109 aaataaaaaacaattaacagagtcatggaccaatctgagaaacatttgacaaagacgtg-accattttgagttattaatagagtcaatgaccaatttaaa 4067207  T
Q  411 aatttggtacaaa 423  Q
    |||||||||||||    
T  4067208 aatttggtacaaa 4067220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 27133911 - 27133830
Alignment:
Q  358 gacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaattta 439  Q
    |||||||||||  |||||||| ||||||||| | ||||| ||| |||||||||||||||||||||| ||| |||| ||||||    
T  27133911 gacaaagacatagaccattttgagttattaataaagtcagggatcaatttaagaatttggtacaaagacagggaccaattta 27133830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 371 - 438
Target Start/End: Complemental strand, 34535368 - 34535301
Alignment:
Q  371 accattttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaattt 438  Q
    |||||||||||||||||| ||||||| |||| ||||| | ||||||||||||||||| |||| |||||    
T  34535368 accattttaagttattaatagagtcaaggactaatttgaaaatttggtacaaaaacagggaccaattt 34535301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 374 - 448
Target Start/End: Original strand, 2464202 - 2464276
Alignment:
Q  374 attttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    ||||| ||||||||| |||||||||||||||||| ||||||||||||||| |||   ||||||||  ||||||||    
T  2464202 attttgagttattaatagagtcatggaccaatttgagaatttggtacaaatacaaaaactaatttggtgatttac 2464276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 2464251 - 2464207
Alignment:
Q  108 tttgtaccaaattctcaaattggttcttgactctattaataactc 152  Q
    |||||||||||||||||||||||| | ||||||||||||||||||    
T  2464251 tttgtaccaaattctcaaattggtccatgactctattaataactc 2464207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 23329319 - 23329392
Alignment:
Q  104 tatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaac 176  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||| ||| ||| |||| || | ||||||||||    
T  23329319 tatctttgtatcaaattctcaatttggttcctgactctattaatacctcgaaatggtctctgtgtttgtcaaac 23329392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 269 - 446
Target Start/End: Complemental strand, 38208438 - 38208261
Alignment:
Q  269 accactgaataatattcaaaagatattgagccattaacactcaaaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagaca 367  Q
    |||||| |||||||| ||| ||| |||||| |||| ||||||||||||||||| || |||||| |||   ||||| ||||| |       |||||||| |    
T  38208438 accactaaataatatccaagagacattgagtcatttacactcaaaatacaaaataattaatagtgtcaatgaccaatctgagaaatatttgacaaagata 38208339  T
Q  368 tgaaccattttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgattt 446  Q
    | ||||||||| |||||| || |||||||  |||||| |||| ||||| ||| ||| ||| | || |||||||||||||    
T  38208338 taaaccattttgagttatcaatagagtcagagaccaaattaaaaatttagtataaagaca-gaaccaatttaatgattt 38208261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 38208574 - 38208522
Alignment:
Q  93 aaatttgtctatatctttgtaccaaattctcaaattggttcttgactctatta 145  Q
    ||||| |||| | |||||||||||||||||||||||||| | |||||||||||    
T  38208574 aaattggtctctgtctttgtaccaaattctcaaattggtccctgactctatta 38208522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 49784880 - 49784817
Alignment:
Q  93 aaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa 156  Q
    ||||| ||| || |||||||||||| |||||| |||||| | |||||||||||||||||| |||    
T  49784880 aaattggtccatgtctttgtaccaagttctcatattggtccctgactctattaataactcaaaa 49784817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 358 - 448
Target Start/End: Complemental strand, 2464146 - 2464056
Alignment:
Q  358 gacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    |||||||||||||  |||||| |||||||||  |||||  ||||||| |||| ||||| ||||||| | |||||| ||||| ||| |||||    
T  2464146 gacaaagacatgagtcattttgagttattaatggagtctgggaccaaattaaaaatttagtacaaagatatggaccaatttgatggtttac 2464056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 4067222 - 4067176
Alignment:
Q  106 tctttgtaccaaattctcaaattggttcttgactctattaataactc 152  Q
    ||||||||||||||| | ||||||||  |||||||||||||||||||    
T  4067222 tctttgtaccaaatttttaaattggtcattgactctattaataactc 4067176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 311 - 340
Target Start/End: Complemental strand, 33321175 - 33321146
Alignment:
Q  311 aaaatacaaaacaactaatagagtcgggga 340  Q
    ||||||||||||||||||||||||||||||    
T  33321175 aaaatacaaaacaactaatagagtcgggga 33321146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 3e-47; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 81 - 350
Target Start/End: Original strand, 67339 - 67607
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacatt 179  Q
    ||||||||||  ||||| ||| || |||||||||||||||||||||||||| | ||||| |||||||||||  ||| ||||||| | ||| |||||||||    
T  67339 gagtaaatcaccaaattggtccatgtctttgtaccaaattctcaaattggtccctgactatattaataacttaaaatggtccctgtttttatcaaacatt 67438  T
Q  180 t-tcagattgattcccccgactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaat 278  Q
    | |||||||| | || |  ||||| ||| || |||| ||||||||| ||||||| ||| |||||||||||| |||||||||| | ||| ||||||| |||    
T  67439 tctcagattggtccctc--actctgttaattgtttt-gtattttaactcattaatgtaccaaataagattcaaaaggcattaggccatcaaccactaaat 67535  T
Q  279 aatattcaaaagatattgagccattaacactcaaaatacaaaacaactaatagagtcggggaccactctgaa 350  Q
    ||||| ||||||  ||||| | ||||||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  67536 aatatccaaaaggcattgatcaattaacactgaaaatacaaaacaactaatagagtcagggaccaatctgaa 67607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 211 - 448
Target Start/End: Complemental strand, 16435043 - 16434806
Alignment:
Q  211 tttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagccattaacactc 310  Q
    ||||| |||||||| ||||||||||| ||||||||||   ||| |||||||   |||||||||| |||||||| ||||| | ||||||| ||||||||||    
T  16435043 tttttatattttaagtcattaacgtaccaaataagatctaaaatgcattatactattaaccactaaataatatccaaaatacattgagctattaacactc 16434944  T
Q  311 aaaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaa 409  Q
    |||||||||||||||||||| ||||  |||||| ||||| |       ||||||||||   |||||||| ||||||||| |||||||| ||||||||| |    
T  16434943 aaaatacaaaacaactaataaagtcaaggaccaatctgagaaatttttgacaaagacagataccatttttagttattaatagagtcat-gaccaatttga 16434845  T
Q  410 gaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    |||||||||||||| | |  ||||||||| ||| |||||    
T  16434844 gaatttggtacaaagagagagactaatttgatggtttac 16434806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 81 - 330
Target Start/End: Original strand, 10388218 - 10388466
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacatt 179  Q
    |||||||| ||||||||  ||| | ||||| ||||||||| | ||| ||||   |||||||||||||||||| ||| |||| || ||||||| |||  ||    
T  10388218 gagtaaattattaaattgatctttgtctttataccaaatttttaaactggtctctgactctattaataactcaaaatggtctctgtctttgttaaatgtt 10388317  T
Q  180 t-tcagattgattcccccgactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaat 278  Q
    | ||| |||| |  | | ||||||||||| | |||| ||||||||| ||||||| |||  ||||||||| | |||| ||||||| ||||||||||  |||    
T  10388318 tctcatattggt--ctctgactctattaggtgtttt-gtattttaagtcattaaggtactaaataagatccaaaagacattatgccattaaccacaaaat 10388414  T
Q  279 aatattcaaaagatattgagccattaacactcaaaatacaaaacaactaata 330  Q
    ||||| ||||||| |||||| |||||| ||||||||||||||||||||||||    
T  10388415 aatatccaaaagacattgagtcattaatactcaaaatacaaaacaactaata 10388466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 81 - 333
Target Start/End: Original strand, 30847624 - 30847875
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacatt 179  Q
    ||||||| ||||||||| |||||| ||||| |||||||||||  |||||||   ||| ||||||||||| |  ||| ||||||| |||||||||||| ||    
T  30847624 gagtaaaccattaaattggtctatgtctttataccaaattcttgaattggtctatgattctattaataatttaaaatggtccctatctttgtcaaacgtt 30847723  T
Q  180 t-tcagattgattcccccgactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaat 278  Q
    | |||||||| |  | |  |||||||||||| |||| ||||||||| ||||||||||| ||||||| || | |||   |||||| ||||||||||| |||    
T  30847724 tctcagattggt--ctctaactctattagttgtttt-gtattttaagtcattaacgtaccaaataaaatacaaaaaatattatgtcattaaccactaaat 30847820  T
Q  279 aatattcaaaagatattgagccattaacactcaaaatacaaaacaactaatagag 333  Q
    |  || ||||| | |||||  |||||||||| |||||||||| ||||||||||||    
T  30847821 agaatccaaaaaacattgaatcattaacacttaaaatacaaagcaactaatagag 30847875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 371 - 448
Target Start/End: Complemental strand, 67418 - 67341
Alignment:
Q  371 accattttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    |||||||||||||||||| | ||||| |||||||||| ||||||||||||||| |||||||| |||||  ||||||||    
T  67418 accattttaagttattaatatagtcagggaccaatttgagaatttggtacaaagacatggaccaatttggtgatttac 67341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 311 - 448
Target Start/End: Complemental strand, 30847764 - 30847626
Alignment:
Q  311 aaaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaa 409  Q
    ||||||||||||||||||||||||  | ||||| ||||| |       |||||||| | | |||||||||| ||||||| ||| |||| |||||||| ||    
T  30847764 aaaatacaaaacaactaatagagttagagaccaatctgagaaacgtttgacaaagatagggaccattttaaattattaatagaatcatagaccaattcaa 30847665  T
Q  410 gaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    |||||||||| ||| |||| ||| ||||||||| |||||    
T  30847664 gaatttggtataaagacatagaccaatttaatggtttac 30847626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 375 - 447
Target Start/End: Complemental strand, 3687699 - 3687627
Alignment:
Q  375 ttttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgattta 447  Q
    |||| ||||||||||||||||||||| |||||| |||||||| |||||| |||  ||| ||||||||||||||    
T  3687699 ttttgagttattaacagagtcatggatcaatttgagaatttgatacaaagacagagaccaatttaatgattta 3687627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 16434804 - 16434873
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataact 151  Q
    ||||||| ||| ||||| |||| | ||||||||||||||||||||||||| || |||||||||||||||||    
T  16434804 gagtaaaccatcaaattagtctctctctttgtaccaaattctcaaattgg-tcatgactctattaataact 16434873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 30122807 - 30122746
Alignment:
Q  197 gactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcatt 259  Q
    ||||||||||||| |||| | ||||||||||||||||||| |||||||||||| |||||||||    
T  30122807 gactctattagttgtttt-gcattttaaatcattaacgtaccaaataagattcaaaaggcatt 30122746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 3687627 - 3687695
Alignment:
Q  84 taaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactc 152  Q
    |||||||||||||| |||| | |||||||| ||||||||||||||| | | ||||||| ||||||||||    
T  3687627 taaatcattaaattggtctctgtctttgtatcaaattctcaaattgatccatgactctgttaataactc 3687695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 30122527 - 30122481
Alignment:
Q  251 aaaggcattatgacattaaccactgaataatattcaaaagatattga 297  Q
    |||||||||||| ||||||||||| |||||||| ||||||| |||||    
T  30122527 aaaggcattatgtcattaaccactaaataatatacaaaagacattga 30122481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 175
Target Start/End: Complemental strand, 30122887 - 30122817
Alignment:
Q  106 tctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaa 175  Q
    |||||||| ||||||||||||||||| | | ||| |||||||||||| ||| |||| || |||||||||||    
T  30122887 tctttgtatcaaattctcaaattggtccctaactttattaataactcaaaatggtctctgtctttgtcaaa 30122817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 2e-45; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 108 - 421
Target Start/End: Complemental strand, 36151073 - 36150761
Alignment:
Q  108 tttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacattt-tcagattgattcccccgactctatt 205  Q
    |||||||||||||||||||||||||| | ||||||| |||||||| ||| |||| || |||||||||||| ||| ||| ||||||  |||||||||| ||    
T  36151073 tttgtaccaaattctcaaattggttcctaactctatgaataactcaaaatggtctctgtctttgtcaaacgtttctcaaattgat--ccccgactctctt 36150976  T
Q  206 agttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagccattaa 305  Q
    |||| |||| ||||||||| ||||||| ||| |||||||||| | ||| |||||||| ||||||||||| |||||||| ||||||| |||||| || |||    
T  36150975 agttgtttt-gtattttaagtcattaatgtaccaaataagatccaaaaagcattatgccattaaccactaaataatatccaaaagacattgagtcaataa 36150877  T
Q  306 cactcaaaatacaaaacaactaatagagtcggggaccactctga-annnnnnngac-aaagacatgaaccattttaagttattaacagagtcatggacca 403  Q
    ||||| ||||||||||| |||||||||| | | ||| | ||||| |       ||| |||||||||||||||||| ||||||| | ||||| | ||||||    
T  36150876 cactc-aaatacaaaac-actaatagagccagtgacaaatctgagaaacatttgacaaaagacatgaaccattttgagttattcatagagttagggacca 36150779  T
Q  404 atttaagaatttggtaca 421  Q
    |||| ||||||| |||||    
T  36150778 atttgagaatttagtaca 36150761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 212 - 448
Target Start/End: Original strand, 13932689 - 13932926
Alignment:
Q  212 ttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagccattaacactca 311  Q
    ||||||||||||| |||||| |||| |||||||||||| |||   |||||| ||||||||||| |||| |||| ||||||||||||||||||||||||||    
T  13932689 ttttgtattttaagtcattatcgtaccaaataagattcaaaatatattatgtcattaaccactaaatagtattaaaaagatattgagccattaacactca 13932788  T
Q  312 aaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaag 410  Q
    |||||||||| |||||||||||||| ||| || ||||| |       |||||||||||  |||||||| ||||||||| ||||||  | | |||||| ||    
T  13932789 aaatacaaaataactaatagagtcgtggatcaatctgagaaacgtttgacaaagacattgaccattttgagttattaatagagtcgagaatcaatttgag 13932888  T
Q  411 aatttggtacaaaaacatggactaatttaatgatttac 448  Q
    ||||| ||||||||| | |||| ||||| ||| |||||    
T  13932889 aatttagtacaaaaatagggaccaatttgatggtttac 13932926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 198 - 331
Target Start/End: Complemental strand, 20730585 - 20730450
Alignment:
Q  198 actctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaa---aagatat 294  Q
    |||||||||||| |||| |||||||||  ||||||||||| ||||||||| |  || |||||||| ||||||||||| |||||||| |||   |||| ||    
T  20730585 actctattagttgtttt-gtattttaagccattaacgtattaaataagatccataatgcattatgtcattaaccactaaataatatccaaaagaagacat 20730487  T
Q  295 tgagccattaacactcaaaatacaaaacaactaatag 331  Q
    ||| ||||| |||||||||||||||||||| ||||||    
T  20730486 tgaaccattgacactcaaaatacaaaacaattaatag 20730450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 82 - 214
Target Start/End: Complemental strand, 13932927 - 13932795
Alignment:
Q  82 agtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacattt 180  Q
    |||||| ||| ||||| |||  ||| ||||||| |||||||||||||| |||| ||||||||||||||||| ||| ||||  | |||||||||||| |||    
T  13932927 agtaaaccatcaaattggtccctatttttgtactaaattctcaaattgattctcgactctattaataactcaaaatggtcaatgtctttgtcaaacgttt 13932828  T
Q  181 -tcagattgattcccccgactctattagttatttt 214  Q
     ||||||||||  || |||||||||||||||||||    
T  13932827 ctcagattgat--ccacgactctattagttatttt 13932795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 199 - 340
Target Start/End: Original strand, 8999644 - 8999787
Alignment:
Q  199 ctctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgag 298  Q
    ||||||||||| |||| |||||| ||||||||| |||| ||||||| || | ||||| ||||| |||||||||| | |||||||| ||||||| |||||     
T  8999644 ctctattagttgtttt-gtatttcaaatcattaccgtaccaaataaaatccaaaaggtattataacattaaccattaaataatatccaaaagacattgaa 8999742  T
Q  299 ccattaacactcaaaatacaaaaca---actaatagagtcgggga 340  Q
    ||||||||  || ||||| ||||||   |||||||||||| ||||    
T  8999743 ccattaacgttcgaaatataaaacaacaactaatagagtcaggga 8999787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 371 - 446
Target Start/End: Original strand, 20730617 - 20730692
Alignment:
Q  371 accattttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgattt 446  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||| ||| ||| |||| || || |||||||    
T  20730617 accattttaagttattaatagagtcatggaccaatttaagtatttggtataaagacagggaccaaattgatgattt 20730692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 22843906 - 22843943
Alignment:
Q  358 gacaaagacatgaaccattttaagttattaacagagtc 395  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  22843906 gacaaagacatggaccattttaagttattaatagagtc 22843943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 2e-39; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 106 - 335
Target Start/End: Original strand, 4872571 - 4872797
Alignment:
Q  106 tctttgtaccaaattctcaaattggttcttgactctattaataactctaaagg-tccctctctttgtcaaacattttcagattgattcccccgactctat 204  Q
    ||||||||||||||||| |||||| |   | |||||||||||||||| ||| | || || |||||||||||| |||  ||||||||  ||| ||||||||    
T  4872571 tctttgtaccaaattcttaaattgatctctaactctattaataactcaaaatgatctctgtctttgtcaaacgtttctagattgat--ccctgactctat 4872668  T
Q  205 tagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagccatta 304  Q
    ||||| |||| | || |||| |||||||||||  ||||||||||| |||| |||| || ||||| ||||| |||||||| ||||||| ||||||||||||    
T  4872669 tagttgtttt-gcatattaagtcattaacgtactaaataagattcaaaagacatt-tgccattagccactaaataatatacaaaagacattgagccatta 4872766  T
Q  305 acactcaaaatacaaaacaactaatagagtc 335  Q
    |||| ||||||||||||||||||||||||||    
T  4872767 acacccaaaatacaaaacaactaatagagtc 4872797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 81 - 332
Target Start/End: Original strand, 51103364 - 51103614
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacatt 179  Q
    |||||||||| |||||| |||| | |||||||||||||||||||||||||| | ||||||||||||||| || ||| ||||  |  ||||||||||  ||    
T  51103364 gagtaaatcactaaattggtctctgtctttgtaccaaattctcaaattggtccctgactctattaataattcaaaatggtcattgcctttgtcaaaagtt 51103463  T
Q  180 t-tcagattgattcccccgactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaat 278  Q
    | || ||||| |  |  | |||||||||||| |||| ||||||||| |||||| |||| |||||||||  | |||||||||||  | | ||||||| |||    
T  51103464 tctcggattggt--cttcaactctattagttctttt-gtattttaagtcattagcgtaccaaataagacccaaaaggcattatatcctcaaccactaaat 51103560  T
Q  279 aatattcaaaagatattgagccattaacactcaaaatacaaaacaactaataga 332  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  51103561 aatatccaaaagacattgaaccattaacactcaaaatacaaaacaactaataga 51103614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 198 - 335
Target Start/End: Original strand, 34932173 - 34932309
Alignment:
Q  198 actctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattga 297  Q
    |||||||||||| |||| ||||||||| ||||||| |||||||||||||| | |||||||||||  ||||||||||| |||||||||||||||| |||||    
T  34932173 actctattagttctttt-gtattttaactcattaatgtatcaaataagatccaaaaggcattatatcattaaccactaaataatattcaaaagacattga 34932271  T
Q  298 gccattaacactcaaaatacaaaacaactaatagagtc 335  Q
    ||||||||||||||||||| |||  |||||||||||||    
T  34932272 gccattaacactcaaaatataaagtaactaatagagtc 34932309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 104 - 448
Target Start/End: Complemental strand, 22886766 - 22886419
Alignment:
Q  104 tatctttgtaccaaattctcaaattggttcttgactctattaataactctaaag-gtccctctctttgtcaaacattttc-agattgattcccccgactc 201  Q
    |||||||||| |||||| | ||||||||  |||||||||||||||| || |||  ||  || |||||||||||| ||||  |||||| |  |  ||||||    
T  22886766 tatctttgtatcaaatttttaaattggtctttgactctattaataattcaaaatagtttctatctttgtcaaacgttttttagattggt--cttcgactc 22886669  T
Q  202 tattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagcca 301  Q
    ||||| || |||| ||||||||| ||||||||||| |||||||||| | |||  ||||||  ||||||||||| |||||||||||||||| |||||||||    
T  22886668 tattacttgtttt-gtattttaagtcattaacgtaacaaataagatccaaaacacattatatcattaaccactaaataatattcaaaagacattgagcca 22886570  T
Q  302 ttaacactcaaaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattttaag---ttattaacagagtcat 397  Q
    | |||||| |||||||||||||||||||||| |  | ||| | ||||| |       |||||||||| | || ||||| ||   ||||||| | |||||     
T  22886569 tgaacactaaaaatacaaaacaactaatagaattagagactaatctgagaaacatttgacaaagacaagtactattttgagttattattaataaagtcag 22886470  T
Q  398 ggaccaatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    | |||||||||||||||||||||||| ||||| || ||||| |||||||||    
T  22886469 gaaccaatttaagaatttggtacaaatacatgaaccaatttgatgatttac 22886419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 104 - 448
Target Start/End: Complemental strand, 22938430 - 22938083
Alignment:
Q  104 tatctttgtaccaaattctcaaattggttcttgactctattaataactctaaag-gtccctctctttgtcaaacattttc-agattgattcccccgactc 201  Q
    |||||||||| |||||| | ||||||||  |||||||||||||||| || |||  ||  || |||||||||||| ||||  |||||| |  |  ||||||    
T  22938430 tatctttgtatcaaatttttaaattggtctttgactctattaataattcaaaatagtttctatctttgtcaaacgttttttagattggt--cttcgactc 22938333  T
Q  202 tattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagcca 301  Q
    ||||| || |||| ||||||||| ||||||||||| |||||||||| | |||  ||||||  ||||||||||| |||||||||||||||| |||||||||    
T  22938332 tattacttgtttt-gtattttaagtcattaacgtaacaaataagatccaaaacacattatatcattaaccactaaataatattcaaaagacattgagcca 22938234  T
Q  302 ttaacactcaaaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattttaag---ttattaacagagtcat 397  Q
    | |||||| |||||||||||||||||||||| |  | ||| | ||||| |       |||||||||| | || ||||| ||   ||||||| | |||||     
T  22938233 tgaacactaaaaatacaaaacaactaatagaattagagactaatctgagaaacatttgacaaagacaagtactattttgagttattattaataaagtcag 22938134  T
Q  398 ggaccaatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    | |||||||||||||||||||||||| ||||| || ||||| |||||||||    
T  22938133 gaaccaatttaagaatttggtacaaatacatgaaccaatttgatgatttac 22938083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 165 - 334
Target Start/End: Complemental strand, 45302607 - 45302440
Alignment:
Q  165 tctttgtcaaacatttt-cagattgattcccccgactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatga 263  Q
    ||||||||||||||||| || |||| |  ||| ||||||||||||| |||| | ||||||| |||||||| ||||||||||||||| ||| |||||||||    
T  45302607 tctttgtcaaacatttttcatattggt--ccctgactctattagttgtttt-gcattttaagtcattaacatatcaaataagattcaaaatgcattatga 45302511  T
Q  264 cattaaccactgaataatattcaaaagatattgagccattaacactcaaaatacaaaacaactaatagagt 334  Q
    |||||||||||||||||||| ||||||| | ||  | |||||| |||||||||||||||||||||||||||    
T  45302510 cattaaccactgaataatatccaaaagacactggactattaacgctcaaaatacaaaacaactaatagagt 45302440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 90 - 438
Target Start/End: Original strand, 35251394 - 35251742
Alignment:
Q  90 attaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacattttc-agatt 187  Q
    |||||||| |||  || |||||||| ||||| | |||||||||   || |||||||||||||| ||| |||   | ||||||||||| |||||  |||||    
T  35251394 attaaattggtccctacctttgtactaaatttttaaattggtttaggattctattaataactcaaaatggtttatgtctttgtcaaatattttttagatt 35251493  T
Q  188 gattcccccgactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaa 287  Q
    |||  | | ||| |||||||||||||| | ||||||| |||||||  || |||||||||| | |||| ||||| | ||||||||||| |||||||| |||    
T  35251494 gat--ctctgacgctattagttatttt-gcattttaagtcattaagataccaaataagatccaaaagacattacgtcattaaccactaaataatatccaa 35251590  T
Q  288 aagatattgagccattaacactcaaaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattttaagttatt 386  Q
    |||| ||||||  |||||||||||||||| |||||||||||||||||| | ||||| ||||| |       || |||||||   |||||| |||||||||    
T  35251591 aagacattgagttattaacactcaaaataaaaaacaactaatagagtcagagaccaatctgagaaacatttgagaaagacaaagaccattataagttatt 35251690  T
Q  387 aacagagtcatggaccaatttaagaatttggtacaaaaacatggactaattt 438  Q
    || ||||| | ||||||| || ||||||||||||||| ||| |||| |||||    
T  35251691 aatagagttagggaccaaattgagaatttggtacaaagacagggaccaattt 35251742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 139 - 335
Target Start/End: Original strand, 43049156 - 43049351
Alignment:
Q  139 tctattaataactctaaa-ggtccctctctttgtcaaacatttt-cagattgattcccccgactctattagttatttttgtattttaaatcattaacgta 236  Q
    |||||||||||||| ||| ||||||| |||||||||| | |||| || |||| | |||  |||||||||| || |||| ||||||||| ||||||| |||    
T  43049156 tctattaataactcaaaatggtccctatctttgtcaagcttttttcaaattggtgccc--gactctattaattgtttt-gtattttaagtcattaatgta 43049252  T
Q  237 tcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattgagccattaacactcaaaatacaaaacaactaatagagtc 335  Q
    |||||||||||   |||||||||||| ||||||||||| |||||||| ||||||| ||||| | ||||||| | |||||||||||||||||||||||||    
T  43049253 tcaaataagatctaaaaggcattatgtcattaaccactaaataatatccaaaagacattgaactattaacattaaaaatacaaaacaactaatagagtc 43049351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 93 - 349
Target Start/End: Original strand, 4892397 - 4892650
Alignment:
Q  93 aaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacattt-tcagattgat 190  Q
    ||||| |||| | ||||||||||||||||| ||||| ||    ||||||||||||||||| ||| |||  || |||||||||||||||| | |||||| |    
T  4892397 aaattggtctctgtctttgtaccaaattcttaaattagtctccgactctattaataactcaaaatggttactgtctttgtcaaacatttcttagattggt 4892496  T
Q  191 tcccccgactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaag 290  Q
      ||| ||||||||||||| |||| | |||||||  || ||||||| |||||||||| | |||  ||||  | |||||| |||| |||||||| ||||||    
T  4892497 --ccctgactctattagttgtttt-gcattttaagccactaacgtaccaaataagatccaaaaaacatt--gccattaaacactaaataatatccaaaag 4892591  T
Q  291 atattgagccattaacactcaaaatacaaaacaactaatagagtcggggaccactctga 349  Q
    | | ||| |||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  4892592 acagtgaaccattaacactcaaaatacaaaacaactaatagagtcgtggaccaatctga 4892650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 195 - 440
Target Start/End: Original strand, 54511429 - 54511671
Alignment:
Q  195 ccgactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatat 294  Q
    ||||||||||||||| |||| |||||||||||||||||||||||| ||||||| | ||||  |||||  ||||||| ||| |||||||| |||||||  |    
T  54511429 ccgactctattagttctttt-gtattttaaatcattaacgtatcagataagatccaaaagatattatatcattaacgactaaataatatccaaaagacgt 54511527  T
Q  295 tgagccattaacactcaaaatacaaaacaactaatagagtcggggaccactct-gaannnnnnngacaaagacatgaaccattttaagttattaacagag 393  Q
    |||   | ||| ||||||||||||||||| ||||||||||| ||||||| | |  ||       ||| |||| ||  |||||||| | ||||||| |||     
T  54511528 tga---actaatactcaaaatacaaaacagctaatagagtcagggaccaatttaaaaaacgtttgactaagatatagaccattttgaattattaatagat 54511624  T
Q  394 tcatggaccaatttaagaatttggtacaaaaacatggactaatttaa 440  Q
    || ||||||||||||||||||||||||||||| |  |||||||||||    
T  54511625 tcgtggaccaatttaagaatttggtacaaaaataccgactaatttaa 54511671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 193 - 321
Target Start/End: Complemental strand, 40681693 - 40681566
Alignment:
Q  193 ccccgactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagat 292  Q
    |||||||| ||||||||||||| ||||||||| ||||||| ||||||| |||||||| |||| ||||||| || | |||| | |||||||| || ||||     
T  40681693 ccccgactgtattagttatttt-gtattttaagtcattaatgtatcaattaagattcaaaagacattatgtcactgaccattaaataatatccataagac 40681595  T
Q  293 attgagccattaacactcaaaatacaaaa 321  Q
    ||||||| |||||||||||||||||||||    
T  40681594 attgagctattaacactcaaaatacaaaa 40681566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 196 - 338
Target Start/End: Complemental strand, 42077276 - 42077134
Alignment:
Q  196 cgactctattagttatttttgtattttaaa-tcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatat 294  Q
    |||||||||||||| |||| ||||||| || ||||||| |||  |||||||||   ||| ||||||||  ||||| |||| |||||||||||||| | ||    
T  42077276 cgactctattagttgtttt-gtattttgaagtcattaatgtactaaataagatcgaaaatgcattatgctattaatcactaaataatattcaaaaaacat 42077178  T
Q  295 tgagccattaacactcaaaatacaaaacaactaatagagtcggg 338  Q
    |||||||||| ||||||||||||||||||||||||||| |||||    
T  42077177 tgagccattatcactcaaaatacaaaacaactaatagaatcggg 42077134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 81 - 176
Target Start/End: Original strand, 39864090 - 39864186
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaac 176  Q
    ||||||||||||||||| |||| | ||||||||||||||| | |||||||| |  ||||||||||||||||| ||| | ||||| ||||||||||||    
T  39864090 gagtaaatcattaaattggtctctgtctttgtaccaaatttttaaattggtccccgactctattaataactcaaaatgatccctgtctttgtcaaac 39864186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 358 - 448
Target Start/End: Complemental strand, 39864182 - 39864092
Alignment:
Q  358 gacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    |||||||||| | | |||||| ||||||||| ||||||  |||||||||||| ||||||||||||| |||  ||| |||||||||||||||    
T  39864182 gacaaagacagggatcattttgagttattaatagagtcggggaccaatttaaaaatttggtacaaagacagagaccaatttaatgatttac 39864092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 441
Target Start/End: Original strand, 33611234 - 33611304
Alignment:
Q  371 accattttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaat 441  Q
    |||||||||||||| ||| ||||| || |||||| |||| ||||||||||||||| |||||| ||||||||    
T  33611234 accattttaagttaataatagagttatagaccaaattaaaaatttggtacaaaaaaatggaccaatttaat 33611304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 371 - 448
Target Start/End: Complemental strand, 51103443 - 51103366
Alignment:
Q  371 accattttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    |||||||| | ||||||| ||||||| |||||||||| ||||||||||||||| |||  ||| |||||| ||||||||    
T  51103443 accattttgaattattaatagagtcagggaccaatttgagaatttggtacaaagacagagaccaatttagtgatttac 51103366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 423
Target Start/End: Complemental strand, 4892525 - 4892412
Alignment:
Q  311 aaaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaa 409  Q
    ||||| ||||||||||||||||||| ||||||| ||| | |       ||||||||||  ||||||||| ||||||||| ||||||   ||| |||||||    
T  4892525 aaaatgcaaaacaactaatagagtcagggaccaatctaagaaatgtttgacaaagacagtaaccattttgagttattaatagagtcggagactaatttaa 4892426  T
Q  410 gaatttggtacaaa 423  Q
    ||||||||||||||    
T  4892425 gaatttggtacaaa 4892412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 180
Target Start/End: Complemental strand, 51103733 - 51103633
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacatt 179  Q
    ||||||| ||| ||||| |||  ||||||||||||||||| ||||||||||   |||||||||||||||||| |||  ||| || ||||| |||||||||    
T  51103733 gagtaaaccatcaaattggtccctatctttgtaccaaattttcaaattggtcactgactctattaataactcaaaatagtctctgtctttatcaaacatt 51103634  T
Q  180 t 180  Q
    |    
T  51103633 t 51103633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 371 - 438
Target Start/End: Original strand, 40681721 - 40681788
Alignment:
Q  371 accattttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaattt 438  Q
    |||||||||||||||||| ||| ||| |||||||||| |||||| |||||||| ||||| || |||||    
T  40681721 accattttaagttattaatagaatcagggaccaatttgagaattcggtacaaagacatgaaccaattt 40681788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 35004497 - 35004543
Alignment:
Q  106 tctttgtaccaaattctcaaattggttcttgactctattaataactc 152  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||||    
T  35004497 tctttgtaccaaattctcatattggtccctgactctattaataactc 35004543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 81 - 149
Target Start/End: Original strand, 22886417 - 22886485
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataa 149  Q
    ||||||||||| ||||| ||  || | ||||||||||||||| |||||||||| ||||| |||||||||    
T  22886417 gagtaaatcatcaaattggttcatgtatttgtaccaaattcttaaattggttcctgactttattaataa 22886485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 81 - 149
Target Start/End: Original strand, 22938081 - 22938149
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctattaataa 149  Q
    ||||||||||| ||||| ||  || | ||||||||||||||| |||||||||| ||||| |||||||||    
T  22938081 gagtaaatcatcaaattggttcatgtatttgtaccaaattcttaaattggttcctgactttattaataa 22938149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 112 - 152
Target Start/End: Original strand, 42077056 - 42077096
Alignment:
Q  112 taccaaattctcaaattggttcttgactctattaataactc 152  Q
    |||||||||||||||||||| ||||||| ||||||||||||    
T  42077056 taccaaattctcaaattggtccttgactttattaataactc 42077096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 4892752 - 4892689
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggttcttgactctatt 144  Q
    ||||||| ||| |||||||| | |||||||||||||||||||||| ||||| |  |||||||||    
T  4892752 gagtaaaccatcaaatttgtttctatctttgtaccaaattctcaatttggtcccagactctatt 4892689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 5808296 - 5808246
Alignment:
Q  81 gagtaaatcattaaatttgtctatatctttgtaccaaattctcaaattggt 131  Q
    |||||||| | |||||| |||  ||||||||||||||||||||||||||||    
T  5808296 gagtaaattactaaattggtccctatctttgtaccaaattctcaaattggt 5808246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 374 - 448
Target Start/End: Complemental strand, 35004548 - 35004474
Alignment:
Q  374 attttaagttattaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaatttaatgatttac 448  Q
    ||||| ||||||||| ||||||| |||||||| | ||||||||||||||| ||| ||| ||| ||  ||||||||    
T  35004548 attttgagttattaatagagtcagggaccaatatgagaatttggtacaaagacagggattaaattggtgatttac 35004474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 358 - 423
Target Start/End: Complemental strand, 35251477 - 35251412
Alignment:
Q  358 gacaaagacatgaaccattttaagttattaacagagtcatggaccaatttaagaatttggtacaaa 423  Q
    ||||||||||| ||||||||| ||||||||| ||| || |  |||||||||| ||||| |||||||    
T  35251477 gacaaagacataaaccattttgagttattaatagaatcctaaaccaatttaaaaatttagtacaaa 35251412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 35251729 - 35251684
Alignment:
Q  106 tctttgtaccaaattctcaaattggttcttgactctattaataact 151  Q
    |||||||||||||||||||| ||||| | | |||||||||||||||    
T  35251729 tctttgtaccaaattctcaatttggtccctaactctattaataact 35251684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 40681775 - 40681730
Alignment:
Q  106 tctttgtaccaaattctcaaattggttcttgactctattaataact 151  Q
    |||||||||| ||||||||||||||| | ||| |||||||||||||    
T  40681775 tctttgtaccgaattctcaaattggtccctgattctattaataact 40681730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 350
Target Start/End: Original strand, 42077249 - 42077290
Alignment:
Q  309 tcaaaatacaaaacaactaatagagtcggggaccactctgaa 350  Q
    ||||||||||||||||||||||||||||  ||||| ||||||    
T  42077249 tcaaaatacaaaacaactaatagagtcgatgaccaatctgaa 42077290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 63; Significance: 5e-27; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 285 - 439
Target Start/End: Original strand, 70765 - 70920
Alignment:
Q  285 caaaagatattgagccattaacactcaaaatacaaaacaactaatagagtcggggaccactctga-annnnnnngacaaagacatgaaccattttaagtt 383  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||| | ||||| ||||| |       |||||||||||| |||||||| || |    
T  70765 caaaagacattgagtcattaacactcaaaatacaaaacaactaatagagtcagagaccaatctgagaaacgtttgacaaagacatggaccattttgagct 70864  T
Q  384 attaacagagtcatggaccaatttaagaatttggtacaaaaacatggactaattta 439  Q
    ||||| |||||||  ||||||||| ||||||| ||||||| ||| |||| ||||||    
T  70865 attaatagagtcagagaccaatttgagaatttagtacaaagacagggaccaattta 70920  T

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Target: scaffold0024; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 70906 - 70822
Alignment:
Q  106 tctttgtaccaaattctcaaattggttcttgactctattaataactctaaa-ggtccctctctttgtcaaacattt-tcagattg 188  Q
    ||||||||| ||||||||||||||||   |||||||||||||| ||| ||| ||||| | |||||||||||| ||| ||||||||    
T  70906 tctttgtactaaattctcaaattggtctctgactctattaatagctcaaaatggtccatgtctttgtcaaacgtttctcagattg 70822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 197 - 298
Target Start/End: Original strand, 8565 - 8665
Alignment:
Q  197 gactctattagttatttttgtattttaaatcattaacgtatcaaataagattctaaaggcattatgacattaaccactgaataatattcaaaagatattg 296  Q
    ||||||||||||| ||||  |||||||||||||||| | | ||||||| || | ||||  |||||| ||||||||||| |||||||| ||||||| ||||    
T  8565 gactctattagttgtttta-tattttaaatcattaaggcaccaaataatatccaaaagatattatgtcattaaccactaaataatatccaaaagacattg 8663  T
Q  297 ag 298  Q
    ||    
T  8664 ag 8665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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