View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6208_high_10 (Length: 339)
Name: NF6208_high_10
Description: NF6208
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6208_high_10 |
 |  |
|
| [»] scaffold0085 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 18 - 315
Target Start/End: Complemental strand, 14395537 - 14395248
Alignment:
| Q |
18 |
catagtgcagatattagcaatatgtgtaactaaatattatttatcaaaaatatcaatgnnnnnnnttattttctctaatgttttctctatatgattttga |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
14395537 |
catagtgcagatattagcaatatgtgtaact----------tatcaaaaatatcaatgaaaaaaattattttctctaatgttttctctatatagttttga |
14395448 |
T |
 |
| Q |
118 |
ttatatatata--gagggcatatctagtgagaatgagttatttatgtgagaatggtgagaacacttctcaatctttggataaaaaatgaatggaccagat |
215 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
14395447 |
ttatatatatatagagggcatatctaatgagaatgagttatttatgtgagaatggtgagaacacttatcaacctttggataaaaaatgaatggaccagat |
14395348 |
T |
 |
| Q |
216 |
taaaaacttaacatgagttttaccctattctataaaaattcatgaacccacctacgcttctttgttcttcgcgttccaataccaagcttatctctacgtg |
315 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14395347 |
taaaaacttaacatgagtttcaccctattctataaaaattcatgaacccacctacgcttctttgttcttcgcgttccaataccaagcttatctctacgtg |
14395248 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 13208663 - 13208789
Alignment:
| Q |
120 |
atatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaacacttctcaatctttggat-aaaaaatgaatggaccagattaa |
218 |
Q |
| |
|
|||||||||| ||||||||| |||||||| | ||||||||||||||||||||||||| |||| |||| ||| ||||||||||||||||||||||| |
|
|
| T |
13208663 |
atatatatagggggcatatcacatgagaatggacaacttatgtgagaatggtgagaacacttatcaacctttagataaaaaaatgaatggaccagattaa |
13208762 |
T |
 |
| Q |
219 |
aaacttaacatgagttttaccctattc |
245 |
Q |
| |
|
|| ||| ||||| || | ||||||||| |
|
|
| T |
13208763 |
aagcttcacatgtgtctcaccctattc |
13208789 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 2707405 - 2707505
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaacacttctcaatctttggataaaaaatgaatggaccagattaa |
218 |
Q |
| |
|
|||||||||| | | ||||||||||||||||| |||| |||| |||||||||||||||| ||| |||| |||| |||||||||| ||||| ||||||||| |
|
|
| T |
2707405 |
tatatatatatatgacatatctagtgagaatgggttaattatatgagaatggtgagaac-cttatcaacctttagataaaaaataaatggtccagattaa |
2707503 |
T |
 |
| Q |
219 |
aa |
220 |
Q |
| |
|
|| |
|
|
| T |
2707504 |
aa |
2707505 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 119 - 221
Target Start/End: Complemental strand, 34064955 - 34064853
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaacacttctcaatctttggataaaaaatgaatggaccagattaa |
218 |
Q |
| |
|
|||||||||||||| |||||| ||||||||| ||| |||| |||||||||||||||||||| |||| |||| ||| |||||| ||||| | ||||||| |
|
|
| T |
34064955 |
tatatatatagaggatgtatctaatgagaatgacttaattatatgagaatggtgagaacacttatcaacctttagattaaaaataaatggtctagattaa |
34064856 |
T |
 |
| Q |
219 |
aaa |
221 |
Q |
| |
|
||| |
|
|
| T |
34064855 |
aaa |
34064853 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 34064090 - 34064162
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaacacttctcaatcttt |
191 |
Q |
| |
|
|||||||||||||| |||||| ||||||||| ||| |||| |||||||||||||||||||| |||| |||| |
|
|
| T |
34064090 |
tatatatatagaggatgtatctaatgagaatgacttaattatatgagaatggtgagaacacttatcaaccttt |
34064162 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 3969385 - 3969336
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaat |
168 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||| |||||||||||| |
|
|
| T |
3969385 |
tatatatatagaggacatatctagtgagaatgggtttgttatgtgagaat |
3969336 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 2312940 - 2312989
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaat |
168 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||| |||||||||||| |
|
|
| T |
2312940 |
tatatatatatagaacatatctagtgagaatgagtttgttatgtgagaat |
2312989 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 11571254 - 11571311
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaa |
176 |
Q |
| |
|
||||||||||| ||||||||| ||||||||| | | |||||||||||||||||||| |
|
|
| T |
11571254 |
tatatatatagggggcatatcacatgagaatgactaacttatgtgagaatggtgagaa |
11571311 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 17219027 - 17219079
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggt |
171 |
Q |
| |
|
|||||||||| || |||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
17219027 |
tatatatatatgggacatatcaagtgagaatgagtattttatgtgagaatggt |
17219079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 86; Significance: 4e-41; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 193 - 314
Target Start/End: Original strand, 31872051 - 31872171
Alignment:
| Q |
193 |
gataaaaaatgaatggaccagattaaaaacttaacatgagttttaccctattctataaaaattcatgaacccacctacgcttctttgttcttcgcgttcc |
292 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
31872051 |
gataaaaaatgaatggaccagattaaaagcttaacatgtatttctgcctattctataaaaattcatgaacccacatac-cttctttgttcttcgcgttcc |
31872149 |
T |
 |
| Q |
293 |
aataccaagcttatctctacgt |
314 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
31872150 |
aataccaagcttatctctacgt |
31872171 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 23365401 - 23365308
Alignment:
| Q |
128 |
agagggcatatctagtgagaatgagttatttatgtgagaatggtgagaacacttctcaatctttggataaaaaatgaatggaccagattaaaaa |
221 |
Q |
| |
|
||||| |||||||||||||||| | | |||||||||||| |||||||||||| ||| |||| ||||||||||||||| ||||||||||||| |
|
|
| T |
23365401 |
agaggacatatctagtgagaatagataacttatgtgagaattgtgagaacacttaccaacctttagataaaaaatgaatgaaccagattaaaaa |
23365308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 37034795 - 37034844
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaat |
168 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
37034795 |
tatatatatagagaacatatctagtgagaatgagtttcttatgtgagaat |
37034844 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 45551935 - 45551992
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaa |
176 |
Q |
| |
|
||||||||||| ||||||||| | ||||||||||| |||||||||||||||||||| |
|
|
| T |
45551935 |
tatatatatagggggcatatcaaatgagaatgagtatcttatgtgagaatggtgagaa |
45551992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 43444589 - 43444539
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatg |
169 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||| || ||||| |||||||| |
|
|
| T |
43444589 |
tatatatatagaggacatatctaatgagaatgacttctttatttgagaatg |
43444539 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 31872003 - 31872036
Alignment:
| Q |
127 |
tagagggcatatctagtgagaatgagttatttat |
160 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| |
|
|
| T |
31872003 |
tagagggcatatctagtaagaatgagttatttat |
31872036 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 39586649 - 39586730
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaacacttctcaatctttggataaaaa |
200 |
Q |
| |
|
|||||||||| | | ||||||||||||||||| || ||| ||||| ||||||||||| |||| | || | ||||||||||| |
|
|
| T |
39586649 |
tatatatatatatgacatatctagtgagaatgtcttctttttgtgaaaatggtgagaatacttattaaccgttggataaaaa |
39586730 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 23364379 - 23364423
Alignment:
| Q |
125 |
tatagagggcatatctagtgagaatgagttatttatgtgagaatg |
169 |
Q |
| |
|
||||||||| |||||||||||||||| || | ||||||||||||| |
|
|
| T |
23364379 |
tatagagggtatatctagtgagaatgggtaacttatgtgagaatg |
23364423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 119 - 248
Target Start/End: Complemental strand, 29703564 - 29703435
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaacacttctcaatctttggataaaaaatgaatggaccagattaa |
218 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||| ||| |||||| ||||| | | ||||| |
|
|
| T |
29703564 |
tatatatatagagaccatatctagtgagaatgagttaattatgtgagaatggtgagaacacttatcaacctttagatcaaaaattaatggtctaaattaa |
29703465 |
T |
 |
| Q |
219 |
aaacttaacatgagttttaccctattctat |
248 |
Q |
| |
|
|||||| ||||| || | | |||||||||| |
|
|
| T |
29703464 |
aaacttcacatgtgtctcatcctattctat |
29703435 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 208
Target Start/End: Complemental strand, 5664338 - 5664264
Alignment:
| Q |
134 |
catatctagtgagaatgagttatttatgtgagaatggtgagaacacttctcaatctttggataaaaaatgaatgg |
208 |
Q |
| |
|
||||||||||||||||| |||| |||| |||||||||||||||||||| |||| |||| ||| |||||| ||||| |
|
|
| T |
5664338 |
catatctagtgagaatgggttaattatatgagaatggtgagaacacttatcaacctttagatgaaaaataaatgg |
5664264 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 35044485 - 35044436
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaat |
168 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| || ||||||||||||| |
|
|
| T |
35044485 |
tatatatatagaggacatatctagtgagaatgacttctttatgtgagaat |
35044436 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 31042718 - 31042776
Alignment:
| Q |
119 |
tatatatata-gagggcatatctagtgagaatgagttatttatgtgagaatggtgagaa |
176 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||| ||| |||| ||||||||||||||| |
|
|
| T |
31042718 |
tatatatataagaggacatatctagtgagaatgacttagttatatgagaatggtgagaa |
31042776 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 40317132 - 40317189
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaa |
176 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||| | |||||||||||||||| |||| |
|
|
| T |
40317132 |
tatatatatagggggcatatcaagtgagaatgatatttttatgtgagaatggtaagaa |
40317189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 527783 - 527725
Alignment:
| Q |
119 |
tatatatata-gagggcatatctagtgagaatgagttatttatgtgagaatggtgagaa |
176 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||| || |||||||||||||| |||||| |
|
|
| T |
527783 |
tatatatatatgaggacatatctagtgagaatgtcttctttatgtgagaatgatgagaa |
527725 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 12296139 - 12296083
Alignment:
| Q |
120 |
atatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaa |
176 |
Q |
| |
|
||||||||| | | ||||||||||||||||| || ||||||||||||| ||||||| |
|
|
| T |
12296139 |
atatatatatatgacatatctagtgagaatgcattttttatgtgagaattgtgagaa |
12296083 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0085 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0085
Description:
Target: scaffold0085; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 245
Target Start/End: Original strand, 39096 - 39184
Alignment:
| Q |
157 |
ttatgtgagaatggtgagaacacttctcaatctttggataaaaaatgaatggaccagattaaaaacttaacatgagttttaccctattc |
245 |
Q |
| |
|
||||||||||| | ||||||||||| ||| ||||| |||||||||||||||||||||||||||||||| ||||| || | ||||||||| |
|
|
| T |
39096 |
ttatgtgagaacgatgagaacacttgtcagtctttagataaaaaatgaatggaccagattaaaaacttcacatgtgtctcaccctattc |
39184 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 221
Target Start/End: Original strand, 52206391 - 52206492
Alignment:
| Q |
120 |
atatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaacacttctcaatctttggataaaaaatgaatggaccagattaaa |
219 |
Q |
| |
|
||||||||| | | ||||||||||||||||| ||| |||| ||||||||||||||| ||||||||| | |||||| |||||| ||||| ||||||||| |
|
|
| T |
52206391 |
atatatatatatgacatatctagtgagaatggcttagttatatgagaatggtgagaatacttctcaacccttggatcaaaaataaatggttcagattaaa |
52206490 |
T |
 |
| Q |
220 |
aa |
221 |
Q |
| |
|
|| |
|
|
| T |
52206491 |
aa |
52206492 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 53522822 - 53522894
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaacacttctcaatcttt |
191 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||| |||| |||| |||||||||||||||||||| |||| |||| |
|
|
| T |
53522822 |
tatatatatataggacatatctagtgagaatgggttaattatatgagaatggtgagaacacttatcaaccttt |
53522894 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 30938899 - 30938832
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaacacttctcaa |
186 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| |||| ||||||| || ||||||||| |||| |
|
|
| T |
30938899 |
tatatatatatagggcatatctagtgagaatgagttaattatatgagaatagtaagaacacttatcaa |
30938832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 217
Target Start/End: Complemental strand, 56459828 - 56459730
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaacacttctcaatctttggataaaaaatgaatggaccagatta |
217 |
Q |
| |
|
|||||||||||||| | |||| ||||||||| ||| |||| |||||||||||||||||||| |||| |||| ||| |||||| ||||| |||||||| |
|
|
| T |
56459828 |
tatatatatagaggatgtttctaatgagaatgacttaattatatgagaatggtgagaacacttatcaacctttagattaaaaataaatggtccagatta |
56459730 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 4782608 - 4782542
Alignment:
| Q |
155 |
atttatgtgagaatggtgagaacacttctcaatctttggataaaaaatgaatggaccagattaaaaa |
221 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| ||| ||||||| |||| ||| ||||||||||| |
|
|
| T |
4782608 |
atttatgtgagaatggtgagaacacttatcaatttttaaataaaaattgaaaggatcagattaaaaa |
4782542 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 56458966 - 56459038
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaacacttctcaatcttt |
191 |
Q |
| |
|
|||||||||||||| |||||| ||||||||| ||| |||| |||||||||||||||||||| |||| |||| |
|
|
| T |
56458966 |
tatatatatagaggatgtatctaatgagaatgacttaattatatgagaatggtgagaacacttatcaaccttt |
56459038 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 44818729 - 44818672
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaa |
176 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||| || |||||||||||||| |||||| |
|
|
| T |
44818729 |
tatatatatataggacatatctagtgagaatgtcttctttatgtgagaatgatgagaa |
44818672 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 44348931 - 44348872
Alignment:
| Q |
127 |
tagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaacacttctcaa |
186 |
Q |
| |
|
|||||| ||||||||||||||||| || | |||| |||||||||||| || ||||||||| |
|
|
| T |
44348931 |
tagaggacatatctagtgagaatgggtaagttatatgagaatggtgaaaatacttctcaa |
44348872 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 169
Target Start/End: Original strand, 50463224 - 50463274
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatg |
169 |
Q |
| |
|
|||||||||| ||| |||||||||||||||| | |||||||| |||||||| |
|
|
| T |
50463224 |
tatatatatataggacatatctagtgagaatcacttatttatatgagaatg |
50463274 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 26341438 - 26341487
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaat |
168 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
26341438 |
tatatatagagagaacatatctagtgagaatgagtttcttatgtgagaat |
26341487 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 33959644 - 33959693
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaat |
168 |
Q |
| |
|
|||||||||||||| |||||| ||||||||||| || |||||||||||| |
|
|
| T |
33959644 |
tatatatatagaggacatatccagtgagaatgaatttgttatgtgagaat |
33959693 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 19330283 - 19330231
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggt |
171 |
Q |
| |
|
|||||||||| |||||||||| |||||||||| || | |||||||||||||| |
|
|
| T |
19330283 |
tatatatatatagggcatatcatgtgagaatgacttttatatgtgagaatggt |
19330231 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 245
Target Start/End: Original strand, 42153169 - 42153258
Alignment:
| Q |
157 |
ttatgtgagaatggtgagaacacttctcaatctttg-gataaaaaatgaatggaccagattaaaaacttaacatgagttttaccctattc |
245 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||| |||| |||| || | ||||||||| |
|
|
| T |
42153169 |
ttatgtgagaatggtgagaacacttatcagccttttagataaaaaatgaatggaccagattaaaagcttatcatgtgtctcaccctattc |
42153258 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 54316685 - 54316604
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaacacttctcaatctttggataaaaa |
200 |
Q |
| |
|
||||||||||| || ||| | |||||||||||| ||| ||||||||||||||||||||||||| |||| |||| ||| |||| |
|
|
| T |
54316685 |
tatatatataggggacatgtttagtgagaatgacttaattatgtgagaatggtgagaacacttgtcaaactttagattaaaa |
54316604 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 24163758 - 24163708
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatg |
169 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
24163758 |
tatatatatagagaacatatctagtgagaatgagtttgttatgtgagaatg |
24163708 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 169
Target Start/End: Original strand, 24162299 - 24162349
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatg |
169 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
24162299 |
tatatatatatagaacatatctagtgagaatgagtttgttatgtgagaatg |
24162349 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 571754 - 571697
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaa |
176 |
Q |
| |
|
|||||||||| |||||||||| ||||||||||| | ||||| |||||||||| |||| |
|
|
| T |
571754 |
tatatatatatagggcatatcaagtgagaatgatatgtttatatgagaatggtaagaa |
571697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 2779698 - 2779755
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaa |
176 |
Q |
| |
|
|||||||||| |||||||||| ||||||||| | | |||||||||||||||||||| |
|
|
| T |
2779698 |
tatatatatatagggcatatcacatgagaatgactaacttatgtgagaatggtgagaa |
2779755 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 6105791 - 6105848
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaa |
176 |
Q |
| |
|
|||||||||| ||| ||||||| |||||||| |||||||| ||||||||||||||| |
|
|
| T |
6105791 |
tatatatatataggacatatcttatgagaatgcattatttatatgagaatggtgagaa |
6105848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 8351306 - 8351363
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaa |
176 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||| | ||||| |||||||||| |||| |
|
|
| T |
8351306 |
tatatatatagggggcatatcaagtgagaatgatatgtttatatgagaatggtaagaa |
8351363 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 35652283 - 35652226
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaa |
176 |
Q |
| |
|
||||||||||| ||||||||| ||||||||| || | ||||||||||||||||||| |
|
|
| T |
35652283 |
tatatatatagggggcatatcacatgagaatgacttttgtatgtgagaatggtgagaa |
35652226 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 55201987 - 55201950
Alignment:
| Q |
134 |
catatctagtgagaatgagttatttatgtgagaatggt |
171 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
55201987 |
catatctagtgagaatgagtttgttatgtgagaatggt |
55201950 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 217
Target Start/End: Original strand, 19402334 - 19402413
Alignment:
| Q |
138 |
tctagtgagaatgagttatttatgtgagaatggtgagaacacttctcaatctttggataaaaaatgaatggaccagatta |
217 |
Q |
| |
|
|||| ||||||||| ||| |||| |||||||||||||||||||| |||| |||| ||| |||||| ||||| |||||||| |
|
|
| T |
19402334 |
tctaatgagaatgacttaattatatgagaatggtgagaacacttatcaacctttagattaaaaataaatggtccagatta |
19402413 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 29117519 - 29117469
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatg |
169 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| || |||||||||||||| |
|
|
| T |
29117519 |
tatatatatagaggacatatctagtgagaatgatttctttatgtgagaatg |
29117469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 1169155 - 1169212
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaa |
176 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| || |||||||||||||| |||||| |
|
|
| T |
1169155 |
tatatatatagaggacatatctagtgagaatgtcttctttatgtgagaatgatgagaa |
1169212 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 1170170 - 1170113
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaa |
176 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| || |||||||||||||| |||||| |
|
|
| T |
1170170 |
tatatatatagaggacatatctagtgagaatgtcttctttatgtgagaatgatgagaa |
1170113 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 19403177 - 19403105
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaacacttctcaatcttt |
191 |
Q |
| |
|
|||||||||||||| |||||| ||||||||| ||| |||| |||||||||||||||||||| |||| |||| |
|
|
| T |
19403177 |
tatatatatagaggatgtatctaatgagaatgacttaattatatgagaatggtgagaacacttatcaaccttt |
19403105 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 169
Target Start/End: Original strand, 29116686 - 29116736
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatg |
169 |
Q |
| |
|
|||||||||| ||| |||||||||||||||||| || |||||||||||||| |
|
|
| T |
29116686 |
tatatatatataggacatatctagtgagaatgatttctttatgtgagaatg |
29116736 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 27789444 - 27789387
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaa |
176 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||| | |||||||||||||||||||| |
|
|
| T |
27789444 |
tatatatatagggggcatatcacatgagaatgagtaacttatgtgagaatggtgagaa |
27789387 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 48578412 - 48578499
Alignment:
| Q |
134 |
catatctagtgagaatgagttatttatgtgagaatggtgagaacacttctcaatctttggataaaaaatgaatggaccagattaaaaa |
221 |
Q |
| |
|
||||||||||||||||| || ||||| ||||||||||||||| || | | |||| || ||| |||||||||||| |||||||||| |
|
|
| T |
48578412 |
catatctagtgagaatgccttctttatatgagaatggtgagaatacatgttaatcattagattaaaaatgaatggttgagattaaaaa |
48578499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 169
Target Start/End: Original strand, 13258940 - 13258990
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatg |
169 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||| || ||||| |||||||| |
|
|
| T |
13258940 |
tatatatatagaggacatatctaatgagaatgacttctttatatgagaatg |
13258990 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 41432888 - 41432839
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaat |
168 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
41432888 |
tatatatatagaggacatatctagtgagaatgagtttgttatgtgagaat |
41432839 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 30517109 - 30517166
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaa |
176 |
Q |
| |
|
|||||||||| |||||||||| ||||||||||| ||||||||||||||| |||||| |
|
|
| T |
30517109 |
tatatatatatagggcatatcacatgagaatgagtaatttatgtgagaatgatgagaa |
30517166 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 36780940 - 36780881
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaaca |
178 |
Q |
| |
|
|||||||||||||| |||||| ||||||||| || | ||||||||||||||||||||| |
|
|
| T |
36780940 |
tatatatatagaggacatatcacatgagaatgacttttgtatgtgagaatggtgagaaca |
36780881 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 207
Target Start/End: Complemental strand, 3130278 - 3130189
Alignment:
| Q |
119 |
tatatatatag-agggcatatctagtgagaatgagttatttatgtgagaatggtgagaacacttctcaatctttggataaaaaatgaatg |
207 |
Q |
| |
|
||||||||||| ||| ||||| || ||||||||||| | |||| | ||||||||||||| ||||||||| | || ||| |||||| |||| |
|
|
| T |
3130278 |
tatatatataggaggacatatgtattgagaatgagtaagttatataagaatggtgagaatacttctcaacccttagatcaaaaataaatg |
3130189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 15401485 - 15401429
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaa |
176 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||| || ||||||||||||| ||||||| |
|
|
| T |
15401485 |
tatatatatataggacatatctagtgagaatg-cttttttatgtgagaattgtgagaa |
15401429 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 24398703 - 24398760
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaa |
176 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||| | ||||||||||||||| |||| |
|
|
| T |
24398703 |
tatatatatagggggcatatcatatgagaatgagtaacttatgtgagaatggtaagaa |
24398760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 24399507 - 24399450
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaa |
176 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||| | ||||||||||||||| |||| |
|
|
| T |
24399507 |
tatatatatagggggcatatcacatgagaatgagtaacttatgtgagaatggtaagaa |
24399450 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 37570085 - 37570028
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaa |
176 |
Q |
| |
|
|||||||||| ||| ||||||| ||||||||| || | ||||||||||||||||||| |
|
|
| T |
37570085 |
tatatatatataggacatatctcatgagaatgaattttatatgtgagaatggtgagaa |
37570028 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 37; Significance: 0.000000000008; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 29200692 - 29200744
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggt |
171 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
29200692 |
tatatatatagggggcatatcaagtgagaatgagtattttatgtgagaatggt |
29200744 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 29299023 - 29299072
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaat |
168 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
29299023 |
tatatatatataggacatatctagtgagaatgagtttgttatgtgagaat |
29299072 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 8172930 - 8172880
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatg |
169 |
Q |
| |
|
|||||||||| |||||||||| ||||||||| | |||||||||||||||| |
|
|
| T |
8172930 |
tatatatatatagggcatatcaagtgagaataacatatttatgtgagaatg |
8172880 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 30322371 - 30322428
Alignment:
| Q |
119 |
tatatatatagagggcatatctagtgagaatgagttatttatgtgagaatggtgagaa |
176 |
Q |
| |
|
|||||||||| |||||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
30322371 |
tatatatatatagggcatatcacatgagaatgagtatcttatgtgagaatggtgagaa |
30322428 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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