View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6208_high_5 (Length: 380)

Name: NF6208_high_5
Description: NF6208
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6208_high_5
NF6208_high_5
[»] chr2 (21 HSPs)
chr2 (6-364)||(12075461-12075826)
chr2 (198-355)||(12053789-12053946)
chr2 (198-362)||(12074256-12074419)
chr2 (106-173)||(6761772-6761839)
chr2 (203-266)||(12058610-12058675)
chr2 (207-346)||(12066702-12066839)
chr2 (197-295)||(12046974-12047073)
chr2 (321-362)||(12062654-12062695)
chr2 (106-197)||(2826002-2826095)
chr2 (203-306)||(12064055-12064159)
chr2 (107-171)||(33275940-33276004)
chr2 (106-174)||(44195499-44195567)
chr2 (198-266)||(5584908-5584978)
chr2 (106-173)||(13811033-13811099)
chr2 (118-198)||(18053075-18053157)
chr2 (106-198)||(18223080-18223174)
chr2 (211-266)||(5570071-5570128)
chr2 (112-205)||(42924469-42924563)
chr2 (111-173)||(45076179-45076241)
chr2 (29-62)||(6581651-6581684)
chr2 (106-197)||(5962009-5962104)
[»] chr3 (10 HSPs)
chr3 (112-197)||(30464009-30464094)
chr3 (95-196)||(49003102-49003201)
chr3 (111-172)||(54912049-54912110)
chr3 (106-175)||(1511325-1511395)
chr3 (111-171)||(38094453-38094513)
chr3 (117-197)||(34758896-34758978)
chr3 (107-197)||(29099142-29099235)
chr3 (106-171)||(37775364-37775429)
chr3 (110-177)||(18399209-18399277)
chr3 (139-175)||(41571647-41571683)
[»] chr5 (12 HSPs)
chr5 (106-175)||(27016662-27016731)
chr5 (111-197)||(34032141-34032229)
chr5 (104-171)||(8761922-8761989)
chr5 (106-175)||(31672402-31672472)
chr5 (112-170)||(35395184-35395242)
chr5 (106-175)||(32017464-32017533)
chr5 (111-171)||(27650859-27650919)
chr5 (93-198)||(28793301-28793408)
chr5 (108-195)||(17098234-17098323)
chr5 (110-171)||(8247062-8247123)
chr5 (106-154)||(12448683-12448731)
chr5 (111-175)||(14475051-14475115)
[»] chr6 (2 HSPs)
chr6 (106-194)||(31702786-31702874)
chr6 (118-175)||(12383076-12383133)
[»] chr1 (17 HSPs)
chr1 (106-197)||(4521054-4521145)
chr1 (106-174)||(36321671-36321739)
chr1 (111-175)||(45584530-45584594)
chr1 (106-176)||(4039648-4039718)
chr1 (106-172)||(5115652-5115718)
chr1 (106-172)||(34445663-34445729)
chr1 (86-168)||(38570380-38570462)
chr1 (106-155)||(5787488-5787537)
chr1 (106-170)||(50875699-50875764)
chr1 (106-174)||(1048716-1048783)
chr1 (112-168)||(28171534-28171590)
chr1 (106-173)||(40203124-40203191)
chr1 (95-198)||(4771988-4772093)
chr1 (112-154)||(5597728-5597770)
chr1 (111-197)||(7549810-7549898)
chr1 (106-166)||(52757398-52757459)
chr1 (118-174)||(40377034-40377090)
[»] chr4 (17 HSPs)
chr4 (51-174)||(7627951-7628073)
chr4 (110-175)||(53919859-53919924)
chr4 (107-176)||(35180652-35180721)
chr4 (106-175)||(42370360-42370428)
chr4 (110-174)||(31871105-31871169)
chr4 (111-200)||(39727605-39727695)
chr4 (110-174)||(44647931-44647995)
chr4 (106-174)||(53737840-53737908)
chr4 (104-171)||(37179686-37179753)
chr4 (106-171)||(23230281-23230347)
chr4 (106-166)||(18089617-18089678)
chr4 (110-196)||(33982393-33982481)
chr4 (106-170)||(40666965-40667030)
chr4 (110-175)||(44646575-44646640)
chr4 (93-174)||(44690296-44690377)
chr4 (113-194)||(40480223-40480306)
chr4 (119-175)||(41468075-41468131)
[»] chr8 (9 HSPs)
chr8 (110-196)||(7691327-7691415)
chr8 (112-177)||(45368775-45368840)
chr8 (106-171)||(42760193-42760258)
chr8 (106-194)||(7513341-7513431)
chr8 (86-194)||(37564358-37564468)
chr8 (106-171)||(12782772-12782837)
chr8 (106-171)||(33636713-33636778)
chr8 (107-175)||(20279602-20279670)
chr8 (107-175)||(21066229-21066297)
[»] chr7 (8 HSPs)
chr7 (51-172)||(8920694-8920815)
chr7 (106-175)||(17157815-17157885)
chr7 (104-197)||(47507577-47507672)
chr7 (117-198)||(5248062-5248144)
chr7 (118-171)||(8170026-8170079)
chr7 (106-196)||(28770445-28770537)
chr7 (106-171)||(33887898-33887963)
chr7 (110-154)||(38452183-38452227)
[»] scaffold0246 (1 HSPs)
scaffold0246 (113-194)||(18162-18245)


Alignment Details
Target: chr2 (Bit Score: 248; Significance: 1e-137; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 6 - 364
Target Start/End: Original strand, 12075461 - 12075826
Alignment:
Q  6 agtgagatgaaagtaaatacaaaaaaggaaaatgttaacgagtg-------acactcttt-aagacctttaaaagttaacnnnnnnnngaaaacttatgt 97  Q
    |||||| |||||||||||| |||||||  ||||||||||||||        ||||||||| |||||||||||||||||||        ||||||||||||    
T  12075461 agtgaggtgaaagtaaatagaaaaaagcgaaatgttaacgagttccccaaaacactcttttaagacctttaaaagttaacttttttt-gaaaacttatgt 12075559  T
Q  98 aactagtacattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccccgacactcgtttacaagaccct 197  Q
    ||||| |||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  12075560 aactaatacattggaaattgaaatatttgacttttgtatgaaatagtttcttcttttggtatgcttaaagagtgcccccggcactcgttaacaagaccct 12075659  T
Q  198 agtaaaaatatggtttttagtcccatattgctagcaaagaaacataatatgtgaagttgttctatataaagataacaaatgaatgactaacaattgcaat 297  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12075660 agtaaaaatagggtttttagtcccatattgctagcaaagaaacataatacgtgaagttgttctatataaagataacaaatgaatgactaacaattgcaat 12075759  T
Q  298 ttgacagagatgtctattggttattcctttcccaatgacactgttcaagtgccacaccgctgaaatt 364  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12075760 ttgacagagatgtctattggttattcctgtcccaatgacactgttcaagtgccacaccgctgaaatt 12075826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 198 - 355
Target Start/End: Original strand, 12053789 - 12053946
Alignment:
Q  198 agtaaaaatatggtttttagtcccatattgctagcaaagaaacataatatgtgaagttgttctatataaagataacaaatgaatgactaacaattgcaat 297  Q
    |||| |||||||| |||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||| |||| |||||||||||||| ||||||    
T  12053789 agtataaatatggcttttagtcccatattgcttgcaaagaaacataatacgtgaagtttttctatataaagatgacaagtgaatgactaacaaatgcaat 12053888  T
Q  298 ttgacagagatgtctattggttattcctttcccaatgacactgttcaagtgccacacc 355  Q
    ||| | |||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  12053889 ttggctgagatgtctattggttattcctgtcccaatgacactgttctagtgccacacc 12053946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 198 - 362
Target Start/End: Original strand, 12074256 - 12074419
Alignment:
Q  198 agtaaaaatatggtttttagtcccatattgctagcaaagaaacataatatgtgaagttgttctatataaagataacaaatgaatgactaacaattgcaat 297  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||| | ||||||||||||||||||| |||   || ||||| |||||||||||||||    
T  12074256 agtaaaaatatggcttttagtcccatattgctaggaaagaaacataacacgtgaagttgttctatataa-gatggtaagtgaattactaacaattgcaat 12074354  T
Q  298 ttgacagagatgtctattggttattcctttcccaatgacactgttcaagtgccacaccgctgaaa 362  Q
    ||||||||||||||| |||||||||||| ||| |||||||||||||||| |||||||| ||||||    
T  12074355 ttgacagagatgtcttttggttattcctgtcctaatgacactgttcaagggccacaccactgaaa 12074419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 6761772 - 6761839
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcc 173  Q
    |||||||||||||||||||| |||||| ||||||||  ||| ||||||||| ||||||||||||||||    
T  6761772 cattggaaattgaaatatttgacttttttatagaatgatttattcttttggaatgcttaaagagtgcc 6761839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 12058610 - 12058675
Alignment:
Q  203 aaatatggtttttagtcccatattgctagcaaagaaacata--atatgtgaagttgttctatataa 266  Q
    |||||||| ||||||||||||||||||||||||||||||||  | ||||||||||||| |||||||    
T  12058610 aaatatggcttttagtcccatattgctagcaaagaaacataacacatgtgaagttgttatatataa 12058675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 346
Target Start/End: Original strand, 12066702 - 12066839
Alignment:
Q  207 atggtttttagtcccatattgctagcaaagaaacata--atatgtgaagttgttctatataaagataacaaatgaatgactaacaattgcaatttgacag 304  Q
    |||| ||||||||||| ||||||| ||||||||||||  | ||||||||||||||||||| ||||||  | |||| | || |||| ||||||||  ||||    
T  12066702 atggcttttagtcccacattgctaccaaagaaacataacacatgtgaagttgttctatat-aagata--agatgact-acaaacatttgcaattgcacag 12066797  T
Q  305 agatgtctattggttattcctttcccaatgacactgttcaag 346  Q
    ||| ||||||||| |||  || || |||||||||||||||||    
T  12066798 agaagtctattggctatcactgtctcaatgacactgttcaag 12066839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 295
Target Start/End: Original strand, 12046974 - 12047073
Alignment:
Q  197 tagtaaaaatatggtttttagtcccatattgctagcaaagaaacata--atatgtgaagttgttctatataaagataacaaatgaatgactaacaattgc 294  Q
    ||||| ||| |||| ||||||||||| |||||||||||||||| |||  | ||||||||||||| ||||| |||||  ||| ||||| ||||||||||||    
T  12046974 tagtataaaaatggcttttagtcccacattgctagcaaagaaaaataacacatgtgaagttgttatatat-aagattgcaagtgaattactaacaattgc 12047072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 362
Target Start/End: Original strand, 12062654 - 12062695
Alignment:
Q  321 ttcctttcccaatgacactgttcaagtgccacaccgctgaaa 362  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  12062654 ttcctgtcccaatgacactgttcaagtgccacaccgctgaaa 12062695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 2826002 - 2826095
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccc--cgacactcgtttacaagaccct 197  Q
    |||||||||| ||||||||| |||||| || | |||| |||||| |||| ||||||||||||||| || |   |||||||||| ||||||||||    
T  2826002 cattggaaatcgaaatattttacttttttaaaaaataatttcttattttagtatgcttaaagagtaccacagggacactcgttaacaagaccct 2826095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 306
Target Start/End: Original strand, 12064055 - 12064159
Alignment:
Q  203 aaatatggtttttagtcccatattgctagcaaagaaacata--atatgtgaagttgttctatataaagataacaaatgaatgactaacaattgcaatttg 300  Q
    |||||||  ||||||||||| |||||||| |||||||||||  | ||||||||||||| ||||  |||||  ||| ||||| ||||||||||||| |||     
T  12064055 aaatatgacttttagtcccacattgctaggaaagaaacataacacatgtgaagttgttatata-caagattgcaagtgaattactaacaattgcagtttc 12064153  T
Q  301 acagag 306  Q
    ||||||    
T  12064154 acagag 12064159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 33275940 - 33276004
Alignment:
Q  107 attggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtg 171  Q
    |||| ||||||||||||||||||||| || | |||| |||||| |||| | ||||||||||||||    
T  33275940 attgaaaattgaaatatttaacttttttaaaaaataatttcttgttttagaatgcttaaagagtg 33276004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 44195567 - 44195499
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgccc 174  Q
    ||||| |||||||| ||||||||||||||| |||||| ||||||  |||   |||||||||||||||||    
T  44195567 cattgtaaattgaattatttaacttttgtaaagaataatttcttaatttaaaatgcttaaagagtgccc 44195499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 266
Target Start/End: Complemental strand, 5584978 - 5584908
Alignment:
Q  198 agtaaaaatatggt--ttttagtcccatattgctagcaaagaaacataatatgtgaagttgttctatataa 266  Q
    ||||||||||||||  || |||||| | || |||||||||||||||||| || |||| |||||||||||||    
T  5584978 agtaaaaatatggtcattctagtccaacatcgctagcaaagaaacataacatatgaacttgttctatataa 5584908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 13811099 - 13811033
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcc 173  Q
    ||||||||||| |||||||| |||||| || |||||| || ||| ||||||| |||||||||||||||    
T  13811099 cattggaaattaaaatattttacttttttaaagaataattgcttgttttggt-tgcttaaagagtgcc 13811033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 18053075 - 18053157
Alignment:
Q  118 aaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccccg--acactcgtttacaagacccta 198  Q
    |||||||| |||||| |||| |||| ||||||||||||  || ||||||||||| ||| |  ||||||||| |||||||||||    
T  18053075 aaatatttgacttttttataaaataatttcttcttttgaaatccttaaagagtgtcccaggaacactcgttaacaagacccta 18053157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 198
Target Start/End: Complemental strand, 18223174 - 18223080
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccc--cgacactcgtttacaagacccta 198  Q
    |||||||||||||||||||  | |||| || |||||| || ||| |||||||||||||||| |||| |||   |||||||||| |||| ||||||    
T  18223174 cattggaaattgaaatattctatttttttaaagaataattgcttgttttggtatgcttaaaaagtgtcccgaagacactcgttaacaaaacccta 18223080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 5570128 - 5570071
Alignment:
Q  211 tttttagtcccatattgctagcaaagaaacata--atatgtgaagttgttctatataa 266  Q
    |||||||||||| ||||| ||||||||||||||  ||| | |||||||||||||||||    
T  5570128 tttttagtcccacattgccagcaaagaaacataacatacgggaagttgttctatataa 5570071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 42924469 - 42924563
Alignment:
Q  112 aaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgc-ccccgacactcgtttacaagaccctagtaaaaa 205  Q
    |||||||||||||| | |||| |  | |||| || |||||||| | ||||||||||||||| ||  |||||||||| ||||||||||| ||||||    
T  42924469 aaattgaaatatttgattttttttaaaaataattacttcttttagaatgcttaaagagtgcaccgagacactcgttgacaagaccctattaaaaa 42924563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 45076179 - 45076241
Alignment:
Q  111 gaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcc 173  Q
    |||||| ||||||||||||||| || |||||| || ||| |||| ||||| ||||||||||||    
T  45076179 gaaattaaaatatttaacttttttaaagaataattgcttattttagtatgtttaaagagtgcc 45076241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 6581684 - 6581651
Alignment:
Q  29 aaaggaaaatgttaacgagtgacactctttaaga 62  Q
    ||||||||||||||||||||| ||||||||||||    
T  6581684 aaaggaaaatgttaacgagtgtcactctttaaga 6581651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 5962009 - 5962104
Alignment:
Q  106 cattggaaattgaaatatttaa-cttttgtatagaata-gtttcttcttttggtatgcttaaagagtgcccccga--cactcgtttacaagaccct 197  Q
    ||||||||||||||||||||||  |||| ||| |||||  ||||||||||| | |||||||||||||| | | ||  |||||||| ||||||||||    
T  5962009 cattggaaattgaaatatttaattttttttatggaatatttttcttcttttagaatgcttaaagagtgtctcggaggcactcgttaacaagaccct 5962104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 30464009 - 30464094
Alignment:
Q  112 aaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccccgacactcgtttacaagaccct 197  Q
    |||||||||| ||| |||||| ||||||||| ||||||||||||| |||||||| |||||||||  ||||||||| ||||||||||    
T  30464009 aaattgaaatgtttgacttttttatagaataatttcttcttttggaatgcttaacgagtgccccgaacactcgttaacaagaccct 30464094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 95 - 196
Target Start/End: Original strand, 49003102 - 49003201
Alignment:
Q  95 tgtaactagtacattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccccgacactcgtttacaagac 194  Q
    ||||| || |||||||||||||||||| ||| |||||| ||| ||||| |||  |||| |   |||||||||||||||||| |||||||||| |||||||    
T  49003102 tgtaattaatacattggaaattgaaatctttgacttttttatggaataattt--tcttataaaatgcttaaagagtgccccggacactcgttaacaagac 49003199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 54912049 - 54912110
Alignment:
Q  111 gaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgc 172  Q
    |||||||||||||||||||||  |||| |||||||| ||||||||| || ||||||||||||    
T  54912049 gaaattgaaatatttaactttgttataaaatagtttattcttttggaattcttaaagagtgc 54912110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 175
Target Start/End: Complemental strand, 1511395 - 1511325
Alignment:
Q  106 cattggaaattgaaatatttaacttttgt-atagaatagtttcttcttttggtatgcttaaagagtgcccc 175  Q
    |||||||||||||||| ||| || ||| | || ||||| ||||||||||||| ||||||||||||||||||    
T  1511395 cattggaaattgaaatctttgacatttttgatggaataatttcttcttttggcatgcttaaagagtgcccc 1511325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 38094513 - 38094453
Alignment:
Q  111 gaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtg 171  Q
    ||||||||||||||| |||||| ||| ||||| ||||||||| ||| ||||||||| ||||    
T  38094513 gaaattgaaatatttgacttttatatggaataatttcttcttatggaatgcttaaaaagtg 38094453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 34758978 - 34758896
Alignment:
Q  117 gaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccccga--cactcgtttacaagaccct 197  Q
    ||||||||| |||||| |||| |||| || |||||||| | || ||||||||||||||| ||  |||||||| ||||||||||    
T  34758978 gaaatatttcacttttttataaaataattacttctttttgaatccttaaagagtgccccggaggcactcgttaacaagaccct 34758896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 29099235 - 29099142
Alignment:
Q  107 attggaaattgaaatatttaacttttgt-atagaatagtttcttcttttggtatgcttaaagagtgcccccg--acactcgtttacaagaccct 197  Q
    |||| |||||||||| ||| |||||| | || ||||  ||||||||||||| ||||||||| |||||||| |  ||||||||| ||||||||||    
T  29099235 attgaaaattgaaatttttgactttttttatggaatcatttcttcttttggaatgcttaaaaagtgcccctggaacactcgttaacaagaccct 29099142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 37775364 - 37775429
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtg 171  Q
    ||||| |||| |||||||||||||||| |||| |||| |||||||||| || || |||| ||||||    
T  37775364 cattgtaaatcgaaatatttaacttttttataaaataatttcttctttaggaattcttatagagtg 37775429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 177
Target Start/End: Original strand, 18399209 - 18399277
Alignment:
Q  110 ggaaattgaaatatttaacttttgtatagaa-tagtttcttcttttggtatgcttaaagagtgcccccg 177  Q
    |||||| ||||||||| |||||| |||| || |  ||||||||||||| || |||||||||||||||||    
T  18399209 ggaaatcgaaatatttgacttttttataaaaattatttcttcttttggaatccttaaagagtgcccccg 18399277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 41571647 - 41571683
Alignment:
Q  139 aatagtttcttcttttggtatgcttaaagagtgcccc 175  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  41571647 aataatttcttcttttggaatgcttaaagagtgcccc 41571683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 106 - 175
Target Start/End: Complemental strand, 27016731 - 27016662
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccc 175  Q
    |||||||||||||||| ||| |||||| ||| ||||| ||||||||||||| ||||||||||||||||||    
T  27016731 cattggaaattgaaatttttgacttttttatggaataatttcttcttttggaatgcttaaagagtgcccc 27016662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 111 - 197
Target Start/End: Original strand, 34032141 - 34032229
Alignment:
Q  111 gaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccc--cgacactcgtttacaagaccct 197  Q
    |||||||||||||||||||||| || |||||| || ||| |||| | ||||||||||||||||||   |||||||||| ||||||||||    
T  34032141 gaaattgaaatatttaacttttttaaagaataattacttattttagaatgcttaaagagtgccccaaggacactcgttaacaagaccct 34032229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 8761989 - 8761922
Alignment:
Q  104 tacattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtg 171  Q
    ||||||| ||||||||||||||||||||| ||||||||| |||||| |||| | || |||||||||||    
T  8761989 tacattgaaaattgaaatatttaacttttttatagaataatttctttttttagaatccttaaagagtg 8761922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 106 - 175
Target Start/End: Complemental strand, 31672472 - 31672402
Alignment:
Q  106 cattggaaattgaaatatttaacttttgt-atagaatagtttcttcttttggtatgcttaaagagtgcccc 175  Q
    ||||||||||||||| |||| |||||| | || ||||||||||| ||||||| ||||||||||||||||||    
T  31672472 cattggaaattgaaacatttgactttttttatggaatagtttctccttttggaatgcttaaagagtgcccc 31672402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 170
Target Start/End: Complemental strand, 35395242 - 35395184
Alignment:
Q  112 aaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagt 170  Q
    ||||| |||||||| |||||| |||| |||||||||||||||||| || ||||||||||    
T  35395242 aaattaaaatatttgacttttttataaaatagtttcttcttttggaatccttaaagagt 35395184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 32017464 - 32017533
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccc 175  Q
    ||||| |||||||||||||| |||||| || |||||| || ||| ||||| |||| ||||||||||||||    
T  32017464 cattgaaaattgaaatattttacttttttaaagaataattgcttgttttgatatgtttaaagagtgcccc 32017533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 27650859 - 27650919
Alignment:
Q  111 gaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtg 171  Q
    |||||| ||||||||||||||| |||| |||| |||||| |||||| ||| ||||||||||    
T  27650859 gaaattaaaatatttaacttttttatataataatttctttttttggaatgtttaaagagtg 27650919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 198
Target Start/End: Complemental strand, 28793408 - 28793301
Alignment:
Q  93 tatgtaactagtacattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccccga--cactcgtttaca 190  Q
    ||||||| || | ||| |||||| ||||||||| |||||| |||| |||  ||||||||||||| || ||||||||| || || ||  |||||||| |||    
T  28793408 tatgtaattaatgcatcggaaatcgaaatatttgacttttttataaaatcatttcttcttttggaatccttaaagagcgcaccggaagcactcgttaaca 28793309  T
Q  191 agacccta 198  Q
    ||||||||    
T  28793308 agacccta 28793301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 17098234 - 17098323
Alignment:
Q  108 ttggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccc--cgacactcgtttacaagacc 195  Q
    |||||||| ||||||||| |||||| || | |||| || ||| |||||  ||| ||||||||||||||  ||||||||||| ||||||||    
T  17098234 ttggaaatcgaaatatttgacttttttaaataataattgcttattttgtgatgtttaaagagtgccccggcgacactcgttaacaagacc 17098323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 8247123 - 8247062
Alignment:
Q  110 ggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtg 171  Q
    |||||| ||||||||| |||||| |||| |||  ||||||||||||| || |||||||||||    
T  8247123 ggaaatcgaaatatttgacttttttataaaattatttcttcttttggaatccttaaagagtg 8247062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 12448731 - 12448683
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttctttt 154  Q
    ||||| ||||||||||||||||||||| ||| ||||| |||||| ||||    
T  12448731 cattgaaaattgaaatatttaacttttttattgaataatttcttatttt 12448683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 14475051 - 14475115
Alignment:
Q  111 gaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccc 175  Q
    ||||||||||||||| || ||| ||||||||| |||||||||||   |||||| ||||| |||||    
T  14475051 gaaattgaaatatttgacatttttatagaataatttcttcttttaaaatgcttgaagagagcccc 14475115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 194
Target Start/End: Original strand, 31702786 - 31702874
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccccgacactcgtttacaagac 194  Q
    |||| |||||| ||||| ||||||||| |||| |||| ||||||||||||  || ||||||||||||||| |||||||||| |||||||    
T  31702786 cattagaaattaaaatacttaacttttttataaaataatttcttcttttgaaattcttaaagagtgccccggacactcgttaacaagac 31702874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 12383076 - 12383133
Alignment:
Q  118 aaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccc 175  Q
    ||||||||||||||| |||| |||| ||||| ||||||  || |||||||||||||||    
T  12383076 aaatatttaacttttttataaaataatttctccttttgaaattcttaaagagtgcccc 12383133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 6e-16; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 4521054 - 4521145
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccccgacactcgtttacaagaccct 197  Q
    |||||||||||||||| |||||||||| || |||||| |  ||| |||| |||||||||||||||||||  | |||||||| ||||||||||    
T  4521054 cattggaaattgaaatgtttaacttttttaaagaataatcgcttgttttagtatgcttaaagagtgcccgaggcactcgttaacaagaccct 4521145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 36321671 - 36321739
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgccc 174  Q
    |||||||||| ||||| |||||||||| || |||||| || ||| ||||||||||||||||||||||||    
T  36321671 cattggaaatcgaaatgtttaacttttctaaagaataattacttgttttggtatgcttaaagagtgccc 36321739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 45584594 - 45584530
Alignment:
Q  111 gaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccc 175  Q
    |||||| ||||||||||||||| |||| |||| ||||||||||||| || |||||||||||||||    
T  45584594 gaaattaaaatatttaacttttttataaaataatttcttcttttggaatccttaaagagtgcccc 45584530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 4039648 - 4039718
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgccccc 176  Q
    |||||||||| ||||||||| |||||| |||| |||| ||| ||||||||| || ||||||||||||||||    
T  4039648 cattggaaatcgaaatatttgacttttttataaaataatttattcttttggaatccttaaagagtgccccc 4039718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 5115652 - 5115718
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgc 172  Q
    ||||||||||||||||||||||||||| ||||  ||| ||| ||||||| | || ||||||||||||    
T  5115652 cattggaaattgaaatatttaacttttttataacataatttattcttttagaatccttaaagagtgc 5115718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 34445729 - 34445663
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgc 172  Q
    |||||||||| ||||||||| |||||| |||| | || ||||||||||||| || ||||||||||||    
T  34445729 cattggaaatcgaaatatttgacttttttataaattaatttcttcttttggaatccttaaagagtgc 34445663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 38570380 - 38570462
Alignment:
Q  86 gaaaacttatgtaactagtacattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaaga 168  Q
    |||||||||||||| || | ||||| |||||||||||||| ||||||  ||  |||  ||||||||||||| |||||||||||    
T  38570380 gaaaacttatgtaattaatgcattgaaaattgaaatatttgactttttgatgaaatcatttcttcttttgggatgcttaaaga 38570462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 5787488 - 5787537
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttg 155  Q
    |||||||||||||||||||||||| || |||| |||| ||||||||||||    
T  5787488 cattggaaattgaaatatttaactattttataaaatattttcttcttttg 5787537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 50875764 - 50875699
Alignment:
Q  106 cattggaaattgaaatatttaactttt-gtatagaatagtttcttcttttggtatgcttaaagagt 170  Q
    |||||||||||||||||||| ||||||  ||||||||| ||||| ||||| | |||||||||||||    
T  50875764 cattggaaattgaaatatttgacttttcctatagaataatttctccttttagaatgcttaaagagt 50875699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 1048716 - 1048783
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgccc 174  Q
    ||||| |||||||| |||||||||||| || |||||| ||| ||  |||||||||||||||||||||||    
T  1048716 cattgaaaattgaactatttaactttt-taaagaataattttttaatttggtatgcttaaagagtgccc 1048783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 28171534 - 28171590
Alignment:
Q  112 aaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaaga 168  Q
    ||||||||||||||||||||| |||| |||| ||| ||||||| | |||||||||||    
T  28171534 aaattgaaatatttaacttttttataaaataattttttctttttgaatgcttaaaga 28171590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 40203124 - 40203191
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcc 173  Q
    |||||||||||||||||||| |||||| |||  |||| |||||| |||||  || |||||||||||||    
T  40203124 cattggaaattgaaatatttgacttttttatgaaataatttcttgttttgtaatccttaaagagtgcc 40203191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 4772093 - 4771988
Alignment:
Q  95 tgtaactagtacattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccccga--cactcgtttacaag 192  Q
    ||||| || ||||||| |||| ||||||||  ||||||  | | |||| || |||| |||||||||||||||||||||||| ||  |||||||| ||||     
T  4772093 tgtaattaatacattgaaaatcgaaatattctactttttaaaaaaataattgcttcatttggtatgcttaaagagtgccccggaggcactcgttaacaaa 4771994  T
Q  193 acccta 198  Q
    ||||||    
T  4771993 acccta 4771988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 5597770 - 5597728
Alignment:
Q  112 aaattgaaatatttaacttttgtatagaatagtttcttctttt 154  Q
    ||||| ||||||||||||||| ||||||||| |||||||||||    
T  5597770 aaattaaaatatttaacttttttatagaataatttcttctttt 5597728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 197
Target Start/End: Complemental strand, 7549898 - 7549810
Alignment:
Q  111 gaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccc--cgacactcgtttacaagaccct 197  Q
    ||||| ||||||||| |||||| |||| |||  ||||||||||||  || ||||||||||| |||   |||||||||| ||||||||||    
T  7549898 gaaatcgaaatatttgacttttttataaaattatttcttcttttgaaattcttaaagagtgtcccgaggacactcgttaacaagaccct 7549810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 52757459 - 52757398
Alignment:
Q  106 cattggaaattgaaatatttaac-ttttgtatagaatagtttcttcttttggtatgcttaaa 166  Q
    |||||||||||||||||||| || |||| | ||||||| ||||| ||||||| |||||||||    
T  52757459 cattggaaattgaaatatttgactttttttgtagaataatttctccttttggaatgcttaaa 52757398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 40377090 - 40377034
Alignment:
Q  118 aaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgccc 174  Q
    |||||||| |||||| |||| |||  ||||||||||||| || ||||||||||||||    
T  40377090 aaatatttgacttttttataaaattatttcttcttttggaatccttaaagagtgccc 40377034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 174
Target Start/End: Complemental strand, 7628073 - 7627951
Alignment:
Q  51 cactctttaagacctttaaaagttaacnnnnnnnngaaaacttatgtaactagtacattggaaattgaaatatttaacttttgtatagaatagtttcttc 150  Q
    |||||||||||||||||||||| ||||        ||||| ||||||||| | |  |||||||||||||| |||| |||||| ||| ||||| ||||| |    
T  7628073 cactctttaagacctttaaaaggtaacttttttt-gaaaagttatgtaaccaatgtattggaaattgaaacatttgacttttctatggaataatttctcc 7627975  T
Q  151 ttttggtatgcttaaagagtgccc 174  Q
    |||||| |||||||||||||||||    
T  7627974 ttttggaatgcttaaagagtgccc 7627951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 53919924 - 53919859
Alignment:
Q  110 ggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccc 175  Q
    |||||||||||| ||| |||||| ||||||||| ||| ||||||||  ||||||||||||||||||    
T  53919924 ggaaattgaaatttttgacttttttatagaataatttattcttttgaaatgcttaaagagtgcccc 53919859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 35180652 - 35180721
Alignment:
Q  107 attggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgccccc 176  Q
    |||| ||||||||| |||| |||||| ||| ||||| ||||| |||| || |||||||||||||||||||    
T  35180652 attgaaaattgaaacatttgacttttctatggaataatttctcctttaggaatgcttaaagagtgccccc 35180721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 42370360 - 42370428
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccc 175  Q
    ||||| ||||| |||||||| |||||| || |||||| || ||| |||||||||||||||||||||||||    
T  42370360 cattgaaaattaaaatattttactttt-taaagaataattgcttgttttggtatgcttaaagagtgcccc 42370428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 31871105 - 31871169
Alignment:
Q  110 ggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgccc 174  Q
    |||||||||||||||| |||||| |||| |||| ||||||||||||  ||||||| | |||||||    
T  31871105 ggaaattgaaatattttacttttttataaaataatttcttcttttgaaatgcttagaaagtgccc 31871169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 39727605 - 39727695
Alignment:
Q  111 gaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccccg--acactcgtttacaagaccctagt 200  Q
    ||||||||||||||| |||||| ||||||||| ||| ||||||| | || ||||||| ||||||| |  ||||||||| |||| ||||||||    
T  39727605 gaaattgaaatatttgactttt-tatagaataatttattcttttagaatccttaaagtgtgccccaggaacactcgttaacaaaaccctagt 39727695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 44647931 - 44647995
Alignment:
Q  110 ggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgccc 174  Q
    |||||||||||||||| | |||  |||| |||||||||||||||||| ||  |||||||||||||    
T  44647931 ggaaattgaaatatttgattttattataaaatagtttcttcttttggaatctttaaagagtgccc 44647995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 53737840 - 53737908
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgccc 174  Q
    |||||||||| ||||||||| | |||| || |||||| |||||| |||||| | |||||||||||||||    
T  53737840 cattggaaatcgaaatatttgaattttttaaagaataatttcttattttggaacgcttaaagagtgccc 53737908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 104 - 171
Target Start/End: Complemental strand, 37179753 - 37179686
Alignment:
Q  104 tacattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtg 171  Q
    |||||||||||| ||||| ||| |||||| || | |||| || ||| |||||||||||||||||||||    
T  37179753 tacattggaaatcgaaatgtttgacttttctaaaaaataattacttgttttggtatgcttaaagagtg 37179686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 23230281 - 23230347
Alignment:
Q  106 cattggaaattgaaatatttaacttttgt-atagaatagtttcttcttttggtatgcttaaagagtg 171  Q
    ||||| ||||||||| ||||||||||| | || ||||| ||||| ||||||| ||||||||||||||    
T  23230281 cattgaaaattgaaacatttaacttttttcatggaataatttctccttttggaatgcttaaagagtg 23230347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 18089678 - 18089617
Alignment:
Q  106 cattggaaattgaaatatttaac-ttttgtatagaatagtttcttcttttggtatgcttaaa 166  Q
    |||||||||||||||||||| || |||| | ||||||| ||||| ||||||| |||||||||    
T  18089678 cattggaaattgaaatatttgactttttttgtagaataatttctccttttggaatgcttaaa 18089617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 33982481 - 33982393
Alignment:
Q  110 ggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccccga--cactcgtttacaagaccc 196  Q
    |||||| |||||||||||||||| |||| |||| ||| ||||||||  || |||||||| | |||| ||  |||||||| |||||||||    
T  33982481 ggaaatcgaaatatttaacttttttataaaataattttttcttttgaaatccttaaagaataccccggagccactcgttcacaagaccc 33982393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 40667030 - 40666965
Alignment:
Q  106 cattggaaattgaaatatttaacttttgt-atagaatagtttcttcttttggtatgcttaaagagt 170  Q
    ||||||||||||||||  || |||||||| || ||||| ||||||||||| | |||||||||||||    
T  40667030 cattggaaattgaaattatttacttttgttatggaataatttcttcttttagaatgcttaaagagt 40666965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 44646575 - 44646640
Alignment:
Q  110 ggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccc 175  Q
    |||||| ||||||||| |||||  |||| |||||||||||||||||  || |||||||| ||||||    
T  44646575 ggaaatcgaaatatttgactttattataaaatagtttcttcttttgaaatccttaaagaatgcccc 44646640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 174
Target Start/End: Original strand, 44690296 - 44690377
Alignment:
Q  93 tatgtaactagtacattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgccc 174  Q
    ||||||| || ||||||| |||| |||||||||||||||| || |  ||| || ||| |||| ||||| |||||||||||||    
T  44690296 tatgtaattattacattgaaaatcgaaatatttaacttttttaaaagataattacttattttagtatgtttaaagagtgccc 44690377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 40480223 - 40480306
Alignment:
Q  113 aattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccccga--cactcgtttacaagac 194  Q
    ||||||||||||| |||||| |||   ||| ||||||||||| | || ||||||||||| ||| ||  ||||||||||||||||    
T  40480223 aattgaaatatttgacttttttatgacataatttcttcttttagcatccttaaagagtgtcccagaggcactcgtttacaagac 40480306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 41468131 - 41468075
Alignment:
Q  119 aatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccc 175  Q
    |||||||||||||| ||||  ||| ||||||||||||| || |||||||||| ||||    
T  41468131 aatatttaacttttttataacataatttcttcttttggaattcttaaagagtacccc 41468075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 110 - 196
Target Start/End: Complemental strand, 7691415 - 7691327
Alignment:
Q  110 ggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgccccc--gacactcgtttacaagaccc 196  Q
    |||||||||||||||||| |||||||| ||||| |||||||||||   ||||||||||||||| |||  |||||||||| |||| ||||    
T  7691415 ggaaattgaaatatttaatttttgtatggaataatttcttcttttaaaatgcttaaagagtgctcccgagacactcgttaacaaaaccc 7691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 45368775 - 45368840
Alignment:
Q  112 aaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccccg 177  Q
    ||||||||||||||||||||| |||| |||| |||||| |||||| || |||||||||||||||||    
T  45368775 aaattgaaatatttaacttttttataaaataatttctttttttggaatccttaaagagtgcccccg 45368840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 42760193 - 42760258
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtg 171  Q
    ||||||||||||||| |||| | |||| ||| ||||| ||||| ||||||| ||||||||||||||    
T  42760193 cattggaaattgaaacatttgatttttttatggaataatttctccttttggaatgcttaaagagtg 42760258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 194
Target Start/End: Original strand, 7513341 - 7513431
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccccg--acactcgtttacaagac 194  Q
    ||||| |||| ||||| ||||| |||| || |||||| || ||| ||||| ||||||||||||||||||| |  ||||||||| |||||||    
T  7513341 cattgaaaatcgaaatgtttaatttttctaaagaataattgcttgttttgatatgcttaaagagtgccccgggaacactcgttaacaagac 7513431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 37564358 - 37564468
Alignment:
Q  86 gaaaacttatgtaactagtacattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccccga--cactc 183  Q
    |||||||| ||||  || |||||||||||||||| ||||| |||||| || |||||| ||||||  ||| | ||| |||||||||| ||| ||  |||||    
T  37564358 gaaaacttgtgtatttaatacattggaaattgaactatttgacttttttaaagaataatttcttaatttagcatgtttaaagagtgtcccagaggcactc 37564457  T
Q  184 gtttacaagac 194  Q
    ||| |||||||    
T  37564458 gttaacaagac 37564468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 12782837 - 12782772
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtg 171  Q
    |||||||||| |||||||| ||||||| || |||||| || | | |||| ||||||||||||||||    
T  12782837 cattggaaatcgaaatattcaacttttttaaagaataattgcatattttagtatgcttaaagagtg 12782772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 33636778 - 33636713
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtg 171  Q
    ||||||||||||||| |||| |||||| |||  |||| ||||| ||||| | ||||||||||||||    
T  33636778 cattggaaattgaaacatttgacttttttatgaaataatttctccttttagaatgcttaaagagtg 33636713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 20279602 - 20279670
Alignment:
Q  107 attggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccc 175  Q
    |||| |||||||||||||| ||||||  | |||||| || ||| |||| | ||||||||||||||||||    
T  20279602 attgaaaattgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgcccc 20279670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 21066229 - 21066297
Alignment:
Q  107 attggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccc 175  Q
    |||| |||||||||||||| ||||||  | |||||| || ||| |||| | ||||||||||||||||||    
T  21066229 attgaaaattgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgcccc 21066297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 51 - 172
Target Start/End: Original strand, 8920694 - 8920815
Alignment:
Q  51 cactctttaagacctttaaaagttaacnnnnnnnngaaaacttatgtaactagtacattggaaattgaaatatttaacttttgtatagaatagtttcttc 150  Q
    |||||||||||||||||||||| |||         ||||| ||||||||  | | ||||||||||||||| |||| |||||| ||| ||||| ||||| |    
T  8920694 cactctttaagacctttaaaaggtaatttttttttgaaaagttatgtaatcaatgcattggaaattgaaacatttgacttttctatggaataatttctcc 8920793  T
Q  151 ttttggtatgcttaaagagtgc 172  Q
    |||||| |||||||||||||||    
T  8920794 ttttggaatgcttaaagagtgc 8920815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 17157815 - 17157885
Alignment:
Q  106 cattggaaattgaaatatttaacttttgt-atagaatagtttcttcttttggtatgcttaaagagtgcccc 175  Q
    ||||||||||||||| |||| |||||| | || ||||| ||||| ||||||| ||||||||||||||||||    
T  17157815 cattggaaattgaaacatttgactttttttatggaataatttctccttttggaatgcttaaagagtgcccc 17157885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 197
Target Start/End: Complemental strand, 47507672 - 47507577
Alignment:
Q  104 tacattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccc--cgacactcgtttacaagaccct 197  Q
    ||||| |||||||||||| ||| | |||| |||| |||  ||||||||||| | || |||||||||||||||   |||||||||| ||||||||||    
T  47507672 tacatcggaaattgaaatctttgatttttttataaaattatttcttcttttagaatccttaaagagtgccccggagacactcgttaacaagaccct 47507577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 198
Target Start/End: Complemental strand, 5248144 - 5248062
Alignment:
Q  117 gaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtg-cccccgacactcgtttacaagacccta 198  Q
    ||||||||| |||||| |||| |||| ||||||||||||  || |||||||| || |||| ||||||| || |||||||||||    
T  5248144 gaaatatttgacttttttataaaataatttcttcttttgaaatccttaaagaatgtccccagacactctttaacaagacccta 5248062  T

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Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 8170079 - 8170026
Alignment:
Q  118 aaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtg 171  Q
    |||||||| |||||| |||| |||| ||||||||||||| || |||||||||||    
T  8170079 aaatatttgacttttttataaaataatttcttcttttggaatccttaaagagtg 8170026  T

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Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 196
Target Start/End: Complemental strand, 28770537 - 28770445
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccccga--cactcgtttacaagaccc 196  Q
    |||||||||||| |||| || ||||||  | |||||| || ||  |||||| |||||||||||||||||| ||  |||||||| |||||||||    
T  28770537 cattggaaattgtaatagttgacttttcaaaagaataattactaattttgggatgcttaaagagtgccccggaggcactcgttaacaagaccc 28770445  T

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Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 33887898 - 33887963
Alignment:
Q  106 cattggaaattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtg 171  Q
    ||||| |||||||||||||| |||||| || |||||| ||  || |||||| ||||||||||||||    
T  33887898 cattgaaaattgaaatatttgacttttttaaagaataattatttattttggaatgcttaaagagtg 33887963  T

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Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 38452227 - 38452183
Alignment:
Q  110 ggaaattgaaatatttaacttttgtatagaatagtttcttctttt 154  Q
    |||||||||||||||| |||||| |||| |||| |||||||||||    
T  38452227 ggaaattgaaatatttgacttttttataaaataatttcttctttt 38452183  T

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Target: scaffold0246 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 18162 - 18245
Alignment:
Q  113 aattgaaatatttaacttttgtatagaatagtttcttcttttggtatgcttaaagagtgcccccga--cactcgtttacaagac 194  Q
    ||||||||||||| |||||| |||   ||| ||||||||||| | || ||||||||||| ||| ||  ||||||||||||||||    
T  18162 aattgaaatatttgacttttttatgacataatttcttcttttagcatccttaaagagtgtcccagaggcactcgtttacaagac 18245  T

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