View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6208_low_15 (Length: 247)
Name: NF6208_low_15
Description: NF6208
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6208_low_15 |
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Alignment Details
Target: chr6 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 32824136 - 32823895
Alignment:
| Q |
1 |
attgccaaaatataggtcattaagttgaaaatgttgaaaattgaaatctcaaaggtataaaccttcatgttaattggagacactctttctttacctatca |
100 |
Q |
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| T |
32824136 |
attgccaaaatataggtcattaagttgaaaatgttgaaaattgaaatctcaaaggtataaaccttcatgttaatgggagacactctttctttacctatca |
32824037 |
T |
|
| Q |
101 |
caaagtacacggtttgttatctttaagttcaactaaaatttctttaaagtctcccgacttagagtcatcttcttctaaaacttcaaaggaaacgaagtta |
200 |
Q |
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|||||||||||||||||||| |||||||||||| || ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |
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| T |
32824036 |
caaagtacacggtttgttat-tttaagttcaacaaatttttttttaaagtctcccgactcagagtcatcttcttctaaaacttcaaaggaaacaaagtta |
32823938 |
T |
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| Q |
201 |
tcctttcttccttagagaattttggcactattttattcttctc |
243 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
32823937 |
tcctttcttccttggagaattttggcactattttattcttctc |
32823895 |
T |
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