View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6210_high_32 (Length: 358)
Name: NF6210_high_32
Description: NF6210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6210_high_32 |
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Alignment Details
Target: chr8 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 17 - 355
Target Start/End: Complemental strand, 8155292 - 8154954
Alignment:
| Q |
17 |
atttatatcttttaannnnnnnaattaacatctcatacatttaaccttgatctgatgaaacattatgttggtaattattatgcaggggagatcaaggttt |
116 |
Q |
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| T |
8155292 |
atttatatcttttaatttttttaattaacatctcatacatttaaccttgatctgatgaaacattatgttggtaattattatgcaggggagatcaaggttt |
8155193 |
T |
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| Q |
117 |
ctgcagcatagagtgcaggaacagacaaatagttttggatgagatgaaagaattagagatctctaccnnnnnnntagtactatgttatagacaatgtagt |
216 |
Q |
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|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||| ||||||||||||||||||| |
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| T |
8155192 |
ctgcagtatagagtgcaggaacagacaaatagttttagatgagatgaaagaattagagatctctaccaaaaaaatggtacaatgttatagacaatgtagt |
8155093 |
T |
|
| Q |
217 |
aatgaggcacgcagagagacacgtcttatacttgaggacattcgaatgcaaagactcaaaaataaagtataatccatttccatgtaatccaaactagtta |
316 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
8155092 |
aatgaggcacgcagagagacacgtcttatacttgaggacattcgaatgcaaagactcaaaaataaagtataatccatttccatgtaatcaaaactagtta |
8154993 |
T |
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| Q |
317 |
tatagtcagattttattttccggccatattcttcgacat |
355 |
Q |
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||||| |||||||||||| |||||||| | |||||||| |
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| T |
8154992 |
aatagttagattttatttttcggccataattttcgacat |
8154954 |
T |
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