View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6210_high_41 (Length: 323)
Name: NF6210_high_41
Description: NF6210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6210_high_41 |
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Alignment Details
Target: chr6 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 14 - 301
Target Start/End: Original strand, 9388928 - 9389213
Alignment:
| Q |
14 |
ataatactcctgctattacatttaaatcaagactttttaatacaaaattagatggttttaaccacacgaaattttttggatggttgcataggcttaatta |
113 |
Q |
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| T |
9388928 |
ataatactcttgctattacatttaaatcaagactttt-aatacaaaattagatggttttaaccacacaaaaaaatttggatggttgcataggcttaataa |
9389026 |
T |
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| Q |
114 |
caattgagtagtaaatatgggatgaatttttattaagtaggtagacgtcttcaactcttacaaactagtataaattaaaagtgagnnnnnnntttaatgc |
213 |
Q |
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| T |
9389027 |
caattgagtagtaaatatgggatgaatttttattaattaggcagacgtcttcaactcttacaaa-tagtataaaataaaagtgagaaaaaaatttaatgc |
9389125 |
T |
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| Q |
214 |
tgnnnnnnntatgggagcagtatgcattgaatttcttttctcactattaaaattcaaccccatgacatgtacttggtgatgatagcca |
301 |
Q |
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| T |
9389126 |
tgaaaaaaatatgggagcagtatgcattgaatttcttttctcactattaaaatccaaccccatgacatgtacttggtgatgatagcca |
9389213 |
T |
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