View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6210_high_48 (Length: 285)
Name: NF6210_high_48
Description: NF6210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6210_high_48 |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 41289983 - 41289761
Alignment:
| Q |
18 |
gatggttggttggcgtttgagagagagaagctcggagcctgtgacgtatgagatactgtgagccatcttctctactggtaattcactatttctacgctga |
117 |
Q |
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| T |
41289983 |
gatggttggttggcgtttgagagagagaagctcggagcctgttacgtatgagatactgtgagccatcttctctgctggtaattcactatttctacgctga |
41289884 |
T |
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| Q |
118 |
ctactctttccgactcccatgcctctcagattgacttttatttggggaaacagaggctggccccgaatccaactcattttgcaacccaaccggatgcatg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41289883 |
ctactctttccgactcccatgcctctcagattgacttttatttggggaaacagacgctggccccgaatccaactcattttgcaacccaaccggatgcatg |
41289784 |
T |
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| Q |
218 |
cacacggtgcacttttcattaac |
240 |
Q |
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||||||||||||||||||||||| |
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| T |
41289783 |
cacacggtgcacttttcattaac |
41289761 |
T |
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