View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6210_high_49 (Length: 285)
Name: NF6210_high_49
Description: NF6210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6210_high_49 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 12 - 285
Target Start/End: Complemental strand, 7042922 - 7042649
Alignment:
| Q |
12 |
acagacacactaagtgcaaagaagtggagaattgcgggttcaaacccgtgcatttggccacttatttgttgacataaaccctgcttcagtcagtccaatg |
111 |
Q |
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| T |
7042922 |
acagacacactaagtgcaaagaagtggagaattgcgggttcgaacccgtgcatttggctacttatttgttgacataaaccctgcttcagtcagtccaatg |
7042823 |
T |
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| Q |
112 |
agaattaacaaagtactcaatattttcttgattaattcccaaatgggagagaaatcatttaatagctaagaagctttagtaattaaacaccattttaaaa |
211 |
Q |
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| T |
7042822 |
agaattaacaaagtactcaatattttcttgattaattcccaaatgggagagaaatcatttaatagctaagaagctttagtaattaaacaccattttaaaa |
7042723 |
T |
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| Q |
212 |
gaaaaaatcagtatcttttcatcaattttgaaaagaataaattcacaacaaatttaattcagtcgaaaacatat |
285 |
Q |
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| T |
7042722 |
gaaaaaatcggtatcttttcatcaattttgaaaagaataaattcacagcaaatttaattcagtccaaaacatat |
7042649 |
T |
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