View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6210_high_55 (Length: 257)
Name: NF6210_high_55
Description: NF6210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6210_high_55 |
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Alignment Details
Target: chr3 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 16 - 249
Target Start/End: Complemental strand, 30354862 - 30354629
Alignment:
| Q |
16 |
caaaacttatgtcttgaaatcaactctttgagtctagcgatttgttttctcagtttcagatgctgaatatctcttattctccttccattttctttccaat |
115 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
30354862 |
caaaacttatgtcttgaaatcaactctttgagtctagagatttgttttctcagtttcagatgctgaatatctcttattctccttccattttctttccagt |
30354763 |
T |
|
| Q |
116 |
tagggtttttaaatatttgttcacaccttggcctcctcagctcttcaccttcttgctctctcttttttaccctgtaattttcttcttcttcccacgttcc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30354762 |
tagggtttttaaatatttgttcacaccttggcctcctcagctcttcaccttcttgctctctcttttttaccctgtaattttcttcttcttcccacgttcc |
30354663 |
T |
|
| Q |
216 |
atcaaaaccttatatttacctttctcttcttcat |
249 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
30354662 |
atcaaaaccttatatttacctttctcttcttcat |
30354629 |
T |
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