View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6210_high_89 (Length: 228)
Name: NF6210_high_89
Description: NF6210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6210_high_89 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 8180188 - 8180415
Alignment:
| Q |
1 |
attaattagctataagttataactaaccaaacccatttgttttgtttctgaaatcaatcaactttgtactttttggaaggaaaatcaattcaatatggat |
100 |
Q |
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| T |
8180188 |
attaattagctataagttataactaaccaaacccatttgttttgtttctgaaatcaatcaactttgtactttttggaaggaaaatcaattcaatatggat |
8180287 |
T |
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| Q |
101 |
gaagtggagctagcttgtgagtctagcttggaatgcaagaaaaccaaagaggaaggaacgtcgaaaaaacaaagtaaagtggagagtgtttcgttttttg |
200 |
Q |
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| T |
8180288 |
gaagtggagctagcttgtgagtctagcttggaatgcaagaaaaccaaagaggaaggaacgtcgaaaaaacaaagtaaagtggagagtgtttcgttttttg |
8180387 |
T |
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| Q |
201 |
gattgtttggtgcagctgatagaactga |
228 |
Q |
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|||||||||||||||| ||||||||||| |
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| T |
8180388 |
gattgtttggtgcagccgatagaactga |
8180415 |
T |
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