View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6210_high_93 (Length: 221)

Name: NF6210_high_93
Description: NF6210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6210_high_93
NF6210_high_93
[»] chr8 (52 HSPs)
chr8 (1-221)||(24551285-24551504)
chr8 (1-221)||(45538360-45538579)
chr8 (1-221)||(9320579-9320800)
chr8 (1-221)||(1237648-1237867)
chr8 (1-221)||(24832977-24833197)
chr8 (1-221)||(15336009-15336228)
chr8 (1-221)||(15425074-15425293)
chr8 (1-221)||(15516378-15516597)
chr8 (1-221)||(23185147-23185366)
chr8 (6-221)||(19943246-19943464)
chr8 (1-221)||(17797433-17797652)
chr8 (1-221)||(36105206-36105425)
chr8 (1-221)||(40845309-40845527)
chr8 (6-221)||(30421354-30421569)
chr8 (9-221)||(16207317-16207530)
chr8 (1-221)||(22673789-22674008)
chr8 (6-221)||(39693546-39693762)
chr8 (1-213)||(22663135-22663346)
chr8 (19-221)||(6407737-6407928)
chr8 (20-221)||(23263549-23263752)
chr8 (53-221)||(16188995-16189162)
chr8 (20-217)||(33082872-33083070)
chr8 (78-221)||(602718-602860)
chr8 (1-221)||(19156207-19156428)
chr8 (76-221)||(12757759-12757903)
chr8 (1-221)||(21932894-21933115)
chr8 (55-221)||(17914470-17914635)
chr8 (53-167)||(20255538-20255652)
chr8 (26-216)||(16681247-16681438)
chr8 (6-208)||(18121033-18121236)
chr8 (19-221)||(14989399-14989591)
chr8 (20-141)||(43639864-43639985)
chr8 (76-216)||(17525725-17525864)
chr8 (53-221)||(17701756-17701923)
chr8 (73-213)||(29693334-29693473)
chr8 (1-107)||(3598267-3598373)
chr8 (6-221)||(17441732-17441947)
chr8 (20-221)||(20382332-20382534)
chr8 (78-216)||(18679831-18679968)
chr8 (117-221)||(18719012-18719115)
chr8 (117-162)||(18722683-18722728)
chr8 (117-162)||(18731028-18731073)
chr8 (4-221)||(24646349-24646567)
chr8 (19-221)||(18151604-18151786)
chr8 (151-217)||(33560295-33560360)
chr8 (148-217)||(13430696-13430764)
chr8 (117-162)||(18685434-18685479)
chr8 (20-217)||(21301037-21301224)
chr8 (20-221)||(17267485-17267686)
chr8 (99-217)||(19707521-19707638)
chr8 (99-221)||(43644907-43645028)
chr8 (88-217)||(21288418-21288537)
[»] chr3 (55 HSPs)
chr3 (1-221)||(53056649-53056868)
chr3 (1-221)||(29855427-29855647)
chr3 (1-221)||(2785082-2785302)
chr3 (5-221)||(33583247-33583464)
chr3 (6-221)||(20627358-20627572)
chr3 (1-221)||(14955445-14955664)
chr3 (1-217)||(24775454-24775671)
chr3 (17-221)||(11223581-11223784)
chr3 (6-221)||(47207724-47207939)
chr3 (23-221)||(5213595-5213791)
chr3 (6-221)||(40799892-40800106)
chr3 (17-221)||(46349782-46349985)
chr3 (6-221)||(47405348-47405562)
chr3 (6-173)||(11869133-11869300)
chr3 (21-221)||(22140782-22140981)
chr3 (60-221)||(41495017-41495177)
chr3 (89-217)||(50300245-50300372)
chr3 (1-221)||(2561206-2561427)
chr3 (21-221)||(18142692-18142893)
chr3 (17-221)||(28582124-28582329)
chr3 (19-221)||(21640885-21641085)
chr3 (53-217)||(13824091-13824254)
chr3 (53-221)||(14969345-14969512)
chr3 (20-221)||(49553428-49553630)
chr3 (20-221)||(49642701-49642903)
chr3 (1-221)||(18121542-18121763)
chr3 (6-221)||(6090750-6090966)
chr3 (6-221)||(38177568-38177784)
chr3 (19-141)||(49666355-49666476)
chr3 (76-221)||(37467351-37467495)
chr3 (53-221)||(12726204-12726371)
chr3 (6-213)||(13948362-13948570)
chr3 (88-221)||(13780593-13780725)
chr3 (76-221)||(14393001-14393145)
chr3 (53-221)||(15903216-15903384)
chr3 (53-221)||(17238896-17239063)
chr3 (26-221)||(46796324-46796508)
chr3 (6-220)||(52920425-52920639)
chr3 (117-221)||(20646172-20646275)
chr3 (19-221)||(30054166-30054358)
chr3 (124-221)||(16032543-16032639)
chr3 (20-217)||(21636620-21636807)
chr3 (20-217)||(40850990-40851177)
chr3 (117-221)||(16658656-16658759)
chr3 (119-221)||(25398295-25398396)
chr3 (1-67)||(50300373-50300439)
chr3 (26-167)||(19888889-19889033)
chr3 (20-221)||(21605604-21605795)
chr3 (53-221)||(29951412-29951579)
chr3 (53-221)||(30000566-30000733)
chr3 (176-221)||(11868287-11868332)
chr3 (88-221)||(31303404-31303536)
chr3 (5-69)||(33598020-33598084)
chr3 (134-221)||(11909079-11909165)
chr3 (134-206)||(45858804-45858875)
[»] chr7 (66 HSPs)
chr7 (1-219)||(12174264-12174482)
chr7 (1-221)||(35952611-35952831)
chr7 (21-221)||(14426562-14426761)
chr7 (1-221)||(16111808-16112027)
chr7 (7-221)||(4821489-4821701)
chr7 (17-210)||(16542960-16543152)
chr7 (17-210)||(16622510-16622702)
chr7 (21-221)||(30945300-30945499)
chr7 (1-220)||(28622280-28622498)
chr7 (6-219)||(33605702-33605915)
chr7 (21-221)||(30944267-30944466)
chr7 (1-221)||(48236826-48237045)
chr7 (6-221)||(2265448-2265662)
chr7 (6-217)||(9709731-9709941)
chr7 (25-196)||(15704447-15704617)
chr7 (17-221)||(33691650-33691855)
chr7 (1-221)||(44467079-44467301)
chr7 (25-221)||(28409054-28409251)
chr7 (17-221)||(23279897-23280101)
chr7 (6-221)||(10883100-10883316)
chr7 (53-221)||(21283349-21283516)
chr7 (20-221)||(22577962-22578164)
chr7 (1-221)||(9069577-9069798)
chr7 (1-220)||(21695417-21695637)
chr7 (60-221)||(15088535-15088695)
chr7 (20-221)||(2913549-2913751)
chr7 (20-221)||(21692302-21692504)
chr7 (20-221)||(19339202-19339393)
chr7 (53-221)||(13137871-13138038)
chr7 (1-221)||(331660-331880)
chr7 (25-221)||(15467931-15468128)
chr7 (20-221)||(32264669-32264861)
chr7 (20-221)||(24788156-24788358)
chr7 (20-216)||(13302830-13303027)
chr7 (109-220)||(14193130-14193240)
chr7 (53-215)||(2500059-2500220)
chr7 (19-221)||(8182945-8183145)
chr7 (6-221)||(11792922-11793138)
chr7 (19-221)||(27871733-27871926)
chr7 (99-221)||(29935380-29935501)
chr7 (60-221)||(13880119-13880279)
chr7 (20-221)||(48062772-48062963)
chr7 (25-221)||(12366694-12366891)
chr7 (99-221)||(19237065-19237186)
chr7 (53-221)||(13648744-13648911)
chr7 (20-221)||(16316498-16316700)
chr7 (20-216)||(19710954-19711151)
chr7 (54-213)||(13730652-13730810)
chr7 (151-217)||(24794788-24794854)
chr7 (116-221)||(5000861-5000965)
chr7 (1-213)||(30025928-30026141)
chr7 (6-221)||(11319420-11319636)
chr7 (25-221)||(14425462-14425647)
chr7 (25-101)||(7339822-7339898)
chr7 (103-195)||(16556664-16556755)
chr7 (103-195)||(16608907-16608998)
chr7 (20-140)||(21381380-21381500)
chr7 (79-221)||(1293045-1293176)
chr7 (99-221)||(13018527-13018648)
chr7 (53-142)||(13692435-13692524)
chr7 (117-221)||(39284604-39284707)
chr7 (131-216)||(16309961-16310045)
chr7 (99-220)||(13880604-13880725)
chr7 (151-217)||(48805953-48806018)
chr7 (22-107)||(4494634-4494721)
chr7 (117-165)||(13472620-13472668)
[»] chr1 (49 HSPs)
chr1 (1-221)||(35040184-35040403)
chr1 (1-221)||(2327282-2327502)
chr1 (1-221)||(25448407-25448628)
chr1 (1-221)||(22427200-22427419)
chr1 (21-221)||(14263312-14263513)
chr1 (17-221)||(2834708-2834911)
chr1 (21-221)||(2267107-2267306)
chr1 (6-221)||(22600028-22600244)
chr1 (3-221)||(48570077-48570293)
chr1 (20-221)||(46089007-46089198)
chr1 (17-221)||(39200851-39201054)
chr1 (6-221)||(29215815-29216029)
chr1 (17-221)||(32785795-32785999)
chr1 (6-221)||(1900363-1900579)
chr1 (53-221)||(35401827-35401994)
chr1 (1-221)||(44821388-44821607)
chr1 (19-221)||(21702832-21703032)
chr1 (20-221)||(22153875-22154077)
chr1 (88-221)||(16235226-16235358)
chr1 (17-221)||(22464667-22464871)
chr1 (76-221)||(36134208-36134351)
chr1 (1-221)||(28492245-28492466)
chr1 (19-221)||(30572215-30572415)
chr1 (53-221)||(23036422-23036589)
chr1 (53-221)||(33256246-33256413)
chr1 (53-221)||(33276418-33276585)
chr1 (6-221)||(7744938-7745152)
chr1 (88-221)||(1577885-1578017)
chr1 (1-119)||(10251096-10251213)
chr1 (53-220)||(2268550-2268713)
chr1 (88-221)||(22201666-22201798)
chr1 (53-221)||(19717542-19717709)
chr1 (6-221)||(38282585-38282800)
chr1 (53-221)||(7309837-7310003)
chr1 (20-216)||(10757444-10757642)
chr1 (20-221)||(12284441-12284643)
chr1 (53-213)||(48704230-48704389)
chr1 (20-221)||(42284646-42284836)
chr1 (117-221)||(17024923-17025026)
chr1 (99-221)||(21191806-21191927)
chr1 (151-217)||(21204916-21204981)
chr1 (151-217)||(21984618-21984683)
chr1 (151-217)||(37642270-37642335)
chr1 (151-217)||(21121057-21121122)
chr1 (179-216)||(21135180-21135217)
chr1 (151-216)||(23024811-23024875)
chr1 (99-219)||(12613756-12613874)
chr1 (181-221)||(26702151-26702191)
chr1 (117-221)||(30893110-30893213)
[»] chr2 (54 HSPs)
chr2 (1-221)||(6392646-6392867)
chr2 (1-221)||(28711565-28711785)
chr2 (1-221)||(30557187-30557408)
chr2 (1-221)||(28701096-28701316)
chr2 (1-219)||(45087050-45087269)
chr2 (1-221)||(31800755-31800974)
chr2 (23-221)||(22802473-22802670)
chr2 (1-217)||(20151902-20152118)
chr2 (1-221)||(31327833-31328053)
chr2 (1-221)||(31334554-31334774)
chr2 (1-216)||(34321804-34322018)
chr2 (1-221)||(33074239-33074458)
chr2 (6-221)||(23235020-23235236)
chr2 (1-221)||(35743870-35744087)
chr2 (1-221)||(6573990-6574211)
chr2 (20-221)||(25829147-25829349)
chr2 (20-216)||(20568635-20568832)
chr2 (55-221)||(13963900-13964065)
chr2 (23-221)||(30667002-30667201)
chr2 (1-221)||(1586910-1587120)
chr2 (53-217)||(38781416-38781579)
chr2 (6-221)||(22317606-22317823)
chr2 (21-221)||(44840447-44840635)
chr2 (6-221)||(25037130-25037346)
chr2 (6-221)||(25041237-25041453)
chr2 (19-221)||(28550814-28551005)
chr2 (53-221)||(18376826-18376993)
chr2 (20-221)||(19540429-19540631)
chr2 (6-221)||(22187973-22188189)
chr2 (19-141)||(22785551-22785672)
chr2 (21-221)||(22776186-22776375)
chr2 (21-221)||(22781564-22781753)
chr2 (26-221)||(21537139-21537335)
chr2 (99-221)||(24576048-24576169)
chr2 (19-221)||(31967939-31968130)
chr2 (76-221)||(30621229-30621373)
chr2 (76-221)||(30623850-30623994)
chr2 (1-221)||(24377114-24377335)
chr2 (35-162)||(9015270-9015399)
chr2 (20-221)||(10009634-10009837)
chr2 (76-221)||(40782490-40782634)
chr2 (6-217)||(24850536-24850749)
chr2 (19-221)||(40332100-40332292)
chr2 (53-167)||(22260472-22260586)
chr2 (26-221)||(3277043-3277228)
chr2 (99-221)||(23595535-23595654)
chr2 (151-221)||(14581528-14581597)
chr2 (176-221)||(39037684-39037729)
chr2 (173-221)||(22455029-22455077)
chr2 (117-160)||(24779416-24779459)
chr2 (99-162)||(26619067-26619130)
chr2 (175-221)||(23184345-23184391)
chr2 (117-167)||(28140603-28140653)
chr2 (176-221)||(25189411-25189456)
[»] chr5 (40 HSPs)
chr5 (1-221)||(14086440-14086661)
chr5 (19-221)||(42243695-42243897)
chr5 (1-221)||(33933282-33933505)
chr5 (26-221)||(30742995-30743189)
chr5 (19-221)||(4887037-4887238)
chr5 (1-217)||(11993907-11994122)
chr5 (1-221)||(33022679-33022898)
chr5 (21-217)||(31117896-31118092)
chr5 (19-221)||(3245363-3245563)
chr5 (3-221)||(26759164-26759381)
chr5 (1-221)||(15516984-15517203)
chr5 (1-221)||(41566335-41566556)
chr5 (1-221)||(29138311-29138528)
chr5 (1-127)||(5429991-5430118)
chr5 (21-221)||(20550910-20551111)
chr5 (20-221)||(89342-89544)
chr5 (53-221)||(17814983-17815150)
chr5 (20-221)||(21910571-21910773)
chr5 (1-216)||(28464252-28464456)
chr5 (99-221)||(7745694-7745815)
chr5 (19-221)||(9088984-9089175)
chr5 (60-221)||(26765513-26765672)
chr5 (19-119)||(25930086-25930186)
chr5 (20-119)||(10848880-10848979)
chr5 (20-221)||(23412894-23413096)
chr5 (26-216)||(6512357-6512545)
chr5 (117-221)||(13545531-13545634)
chr5 (99-216)||(21072241-21072357)
chr5 (1-221)||(26784369-26784590)
chr5 (20-221)||(32160781-32160982)
chr5 (104-221)||(28139622-28139738)
chr5 (19-140)||(35986162-35986282)
chr5 (19-69)||(30115797-30115847)
chr5 (99-217)||(35932016-35932124)
chr5 (124-221)||(30115863-30115959)
chr5 (141-221)||(21199046-21199125)
chr5 (176-221)||(642784-642829)
chr5 (176-221)||(6499254-6499299)
chr5 (176-221)||(12352872-12352917)
chr5 (176-216)||(25930233-25930273)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-221)||(215370-215589)
[»] chr6 (44 HSPs)
chr6 (4-221)||(19832946-19833163)
chr6 (1-221)||(20487828-20488048)
chr6 (1-221)||(15954722-15954941)
chr6 (35-221)||(16877232-16877417)
chr6 (1-221)||(21618263-21618482)
chr6 (20-221)||(12349012-12349211)
chr6 (1-216)||(16336151-16336365)
chr6 (19-221)||(22076336-22076537)
chr6 (17-221)||(20730631-20730834)
chr6 (1-221)||(22802160-22802379)
chr6 (1-221)||(32544284-32544505)
chr6 (26-221)||(9717862-9718058)
chr6 (21-217)||(19688789-19688984)
chr6 (21-221)||(29918036-29918236)
chr6 (6-221)||(13435551-13435767)
chr6 (64-221)||(12423280-12423435)
chr6 (1-221)||(16265061-16265280)
chr6 (1-221)||(26972137-26972356)
chr6 (1-221)||(18435575-18435796)
chr6 (21-221)||(14100369-14100570)
chr6 (26-213)||(23284591-23284779)
chr6 (7-221)||(20112614-20112830)
chr6 (76-221)||(15302219-15302363)
chr6 (88-221)||(15531622-15531754)
chr6 (76-221)||(18378333-18378477)
chr6 (76-221)||(21625120-21625263)
chr6 (26-221)||(12715353-12715550)
chr6 (19-221)||(33351858-33352056)
chr6 (76-221)||(15987252-15987397)
chr6 (20-217)||(19065957-19066144)
chr6 (1-95)||(139279-139374)
chr6 (1-95)||(147300-147395)
chr6 (26-162)||(13602249-13602387)
chr6 (20-160)||(19624058-19624200)
chr6 (20-210)||(34451596-34451787)
chr6 (135-221)||(21235144-21235229)
chr6 (176-221)||(17381540-17381585)
chr6 (1-50)||(17381603-17381652)
chr6 (76-141)||(19086246-19086311)
chr6 (53-221)||(24116847-24117015)
chr6 (1-96)||(21235256-21235351)
chr6 (151-216)||(19482776-19482840)
chr6 (176-216)||(17316610-17316650)
chr6 (177-221)||(25594087-25594131)
[»] chr4 (50 HSPs)
chr4 (1-221)||(8105650-8105871)
chr4 (5-217)||(56532943-56533156)
chr4 (47-221)||(29121383-29121556)
chr4 (1-221)||(10692864-10693083)
chr4 (1-221)||(10906630-10906849)
chr4 (6-221)||(54679943-54680155)
chr4 (1-221)||(413015-413234)
chr4 (1-221)||(6517498-6517717)
chr4 (6-221)||(22675404-22675618)
chr4 (1-221)||(17247257-17247475)
chr4 (1-221)||(19884715-19884935)
chr4 (53-217)||(3483738-3483901)
chr4 (20-221)||(37435431-37435633)
chr4 (6-217)||(13575998-13576208)
chr4 (21-221)||(3105319-3105517)
chr4 (1-221)||(17398563-17398772)
chr4 (1-221)||(3395603-3395824)
chr4 (6-221)||(45833407-45833623)
chr4 (53-221)||(14604837-14605005)
chr4 (64-221)||(25651046-25651202)
chr4 (76-216)||(9140930-9141069)
chr4 (65-221)||(16940029-16940183)
chr4 (21-221)||(19620958-19621159)
chr4 (26-221)||(16632453-16632649)
chr4 (20-191)||(56034617-56034789)
chr4 (53-221)||(12601114-12601281)
chr4 (53-221)||(19666385-19666552)
chr4 (37-221)||(37985525-37985710)
chr4 (27-162)||(55731851-55731985)
chr4 (53-167)||(14833462-14833576)
chr4 (76-210)||(29680498-29680631)
chr4 (89-221)||(12811145-12811273)
chr4 (6-221)||(19911762-19911979)
chr4 (20-162)||(14904252-14904396)
chr4 (20-221)||(55380303-55380505)
chr4 (77-221)||(10072948-10073091)
chr4 (134-221)||(16853516-16853602)
chr4 (173-217)||(39419784-39419828)
chr4 (178-221)||(1672402-1672445)
chr4 (178-221)||(1674877-1674920)
chr4 (151-217)||(9751569-9751634)
chr4 (151-217)||(22190863-22190928)
chr4 (8-69)||(3793287-3793348)
chr4 (176-221)||(6641697-6641742)
chr4 (19-96)||(14571161-14571238)
chr4 (151-217)||(38513895-38513960)
chr4 (115-221)||(40846112-40846217)
chr4 (176-217)||(3499705-3499746)
chr4 (20-213)||(15475050-15475233)
chr4 (151-216)||(20977475-20977539)
[»] scaffold1359 (2 HSPs)
scaffold1359 (21-221)||(548-747)
scaffold1359 (25-221)||(1662-1847)
[»] scaffold0043 (1 HSPs)
scaffold0043 (19-219)||(78257-78456)
[»] scaffold0439 (1 HSPs)
scaffold0439 (1-221)||(6613-6832)
[»] scaffold1331 (1 HSPs)
scaffold1331 (27-219)||(1598-1789)
[»] scaffold0471 (1 HSPs)
scaffold0471 (1-221)||(3323-3542)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-221)||(9174-9392)
[»] scaffold0414 (1 HSPs)
scaffold0414 (19-221)||(7047-7248)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-221)||(5472-5694)
[»] scaffold0004 (4 HSPs)
scaffold0004 (23-221)||(211417-211614)
scaffold0004 (6-221)||(377435-377651)
scaffold0004 (6-221)||(220257-220472)
scaffold0004 (100-221)||(244256-244376)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-221)||(60822-61041)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-221)||(89928-90147)
[»] scaffold0227 (1 HSPs)
scaffold0227 (1-221)||(22695-22916)
[»] scaffold0527 (2 HSPs)
scaffold0527 (19-209)||(7963-8151)
scaffold0527 (19-107)||(1-88)
[»] scaffold0035 (2 HSPs)
scaffold0035 (1-221)||(99081-99297)
scaffold0035 (53-216)||(19397-19559)
[»] scaffold0011 (3 HSPs)
scaffold0011 (19-162)||(65320-65462)
scaffold0011 (19-162)||(144365-144507)
scaffold0011 (26-221)||(164843-165038)
[»] scaffold0217 (3 HSPs)
scaffold0217 (19-221)||(9579-9779)
scaffold0217 (1-221)||(22004-22223)
scaffold0217 (53-221)||(19050-19217)
[»] scaffold0411 (1 HSPs)
scaffold0411 (53-221)||(12228-12395)
[»] scaffold0290 (1 HSPs)
scaffold0290 (20-221)||(18511-18713)
[»] scaffold0161 (2 HSPs)
scaffold0161 (17-221)||(9994-10200)
scaffold0161 (176-221)||(14819-14864)
[»] scaffold0084 (3 HSPs)
scaffold0084 (1-221)||(32504-32725)
scaffold0084 (6-221)||(49351-49567)
scaffold0084 (122-221)||(339-437)
[»] scaffold0120 (2 HSPs)
scaffold0120 (26-220)||(36671-36866)
scaffold0120 (26-220)||(42139-42334)
[»] scaffold0005 (3 HSPs)
scaffold0005 (53-221)||(212373-212541)
scaffold0005 (53-167)||(6123-6237)
scaffold0005 (19-96)||(246138-246215)
[»] scaffold0337 (1 HSPs)
scaffold0337 (53-221)||(14667-14834)
[»] scaffold0210 (1 HSPs)
scaffold0210 (20-221)||(1679-1881)
[»] scaffold0065 (1 HSPs)
scaffold0065 (53-221)||(1709-1876)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-221)||(7722-7943)
[»] scaffold0026 (2 HSPs)
scaffold0026 (53-216)||(60040-60202)
scaffold0026 (25-221)||(7945-8142)
[»] scaffold0479 (1 HSPs)
scaffold0479 (26-221)||(9988-10184)
[»] scaffold0861 (1 HSPs)
scaffold0861 (53-221)||(4872-5039)
[»] scaffold0171 (1 HSPs)
scaffold0171 (20-221)||(27319-27521)
[»] scaffold0023 (1 HSPs)
scaffold0023 (25-221)||(103591-103788)
[»] scaffold0771 (1 HSPs)
scaffold0771 (6-213)||(502-710)
[»] scaffold0047 (2 HSPs)
scaffold0047 (53-167)||(30296-30410)
scaffold0047 (176-221)||(9922-9967)
[»] scaffold0083 (2 HSPs)
scaffold0083 (6-216)||(25851-26062)
scaffold0083 (76-167)||(44652-44743)
[»] scaffold0146 (1 HSPs)
scaffold0146 (53-221)||(15136-15303)
[»] scaffold0247 (2 HSPs)
scaffold0247 (19-117)||(23454-23551)
scaffold0247 (113-221)||(25384-25491)
[»] scaffold0056 (2 HSPs)
scaffold0056 (20-221)||(25566-25757)
scaffold0056 (26-221)||(34711-34896)
[»] scaffold0249 (1 HSPs)
scaffold0249 (19-221)||(17666-17857)
[»] scaffold0426 (1 HSPs)
scaffold0426 (76-221)||(13590-13734)
[»] scaffold0116 (1 HSPs)
scaffold0116 (35-221)||(20876-21063)
[»] scaffold0007 (1 HSPs)
scaffold0007 (60-173)||(143154-143267)
[»] scaffold0473 (2 HSPs)
scaffold0473 (1-140)||(2585-2723)
scaffold0473 (176-221)||(2738-2783)
[»] scaffold1434 (1 HSPs)
scaffold1434 (20-167)||(676-825)
[»] scaffold0359 (1 HSPs)
scaffold0359 (27-221)||(5587-5782)
[»] scaffold0280 (1 HSPs)
scaffold0280 (97-221)||(2700-2822)
[»] scaffold0132 (1 HSPs)
scaffold0132 (35-221)||(37991-38177)
[»] scaffold0069 (1 HSPs)
scaffold0069 (20-140)||(5225-5345)
[»] scaffold0220 (1 HSPs)
scaffold0220 (134-221)||(1803-1889)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-161)||(39503-39665)
scaffold0022 (1-161)||(137563-137725)
[»] scaffold0387 (1 HSPs)
scaffold0387 (151-217)||(7404-7469)
[»] scaffold0364 (1 HSPs)
scaffold0364 (120-220)||(6027-6126)
[»] scaffold0352 (1 HSPs)
scaffold0352 (25-217)||(727-909)
[»] scaffold0324 (1 HSPs)
scaffold0324 (117-221)||(9975-10078)
[»] scaffold0193 (1 HSPs)
scaffold0193 (21-167)||(15866-16015)
[»] scaffold0045 (1 HSPs)
scaffold0045 (151-217)||(87623-87688)
[»] scaffold0908 (1 HSPs)
scaffold0908 (176-221)||(3942-3987)
[»] scaffold0530 (1 HSPs)
scaffold0530 (176-221)||(2042-2087)
[»] scaffold0334 (1 HSPs)
scaffold0334 (117-162)||(9872-9917)


Alignment Details
Target: chr8 (Bit Score: 161; Significance: 5e-86; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 24551504 - 24551285
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  24551504 agtttatcagaagccaaaaatcaccagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagttgtttaatggattcaacctcgtctaaagat 24551405  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| ||||||||||||||||||||||||||||||||  ||||||| |||||||||||| |||| || ||| |||||| ||| |||||||||| |||    
T  24551404 tgcagaagactggaaaagtgaagcaacgactattttgaaaagatttgaaggcattggatgcttgttcttc-aaagagcgttaacatagtacgtttgtacg 24551306  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  24551305 aagtgtacaaccactacctcc 24551285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 45538360 - 45538579
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  45538360 agtttatcataagccaaaaatcaccagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagttgtttaatggattcaacctcgtctaaagat 45538459  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| ||||||||||||||||||| ||||||||||||| |||||||  ||||||||||| |||| || ||| ||||||||||||  ||||||| |||    
T  45538460 tgcagaagactggaaaagtgaagcaacaactattttgaaaggatttgaagacattggatgcttgttcttc-aaagagcgttgacaaatcacgtttgtacg 45538558  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  45538559 aagtgtacaaccactacctcc 45538579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 9320800 - 9320579
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaat-ggattcaacctcgtctaaaga 99  Q
    |||||||||||||| |||||||| |||||||||||||||||||  |||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  9320800 agtttatcagaagctaaaaatcaccagaagctgcagttcatcagaggatgcaacttaaggcttcaaaagctgtttaattggattcaacctcgtctaaaga 9320701  T
Q  100 ttgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaac 199  Q
    |||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||||||||||  ||| |||||| |||||||||||||||  |||| ||    
T  9320700 ttgcagaagactggaaaagtgaagcaacaattattttgaaaggatttgaacgcattggatgcttattcttcaaaagagcgttgacaaagtatatttgtac 9320601  T
Q  200 gaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||||||||    
T  9320600 gaagtgtacaaccactacctcc 9320579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 1237867 - 1237648
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1237867 agtttatcagaagccaaaaattaccagaagctgcaattcatcatgggatgcaacttaaggcttcaaaagctgtttaatggattcaacctcgtctaaagat 1237768  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| || |||||||||||||||||||||||||||||| ||||||| |||||||||  | |||| || ||| |||||||||||||||| ||||  ||    
T  1237767 tgcagaagaccggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatatttgttcttc-aaagagcgttgacaaagtacttttgtgcg 1237669  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  1237668 aagtgtacaaccactacctcc 1237648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 24832977 - 24833197
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatgg-attcaacctcgtctaaaga 99  Q
    ||||||| |||||| |||||||| |||||||||||||||||||  |||||||||||||||||||||||||| |||||||| |||||||||||||||| ||    
T  24832977 agtttattagaagctaaaaatcaccagaagctgcagttcatcagaggatgcaacttaaggcttcaaaagctgtttaatgggattcaacctcgtctaagga 24833076  T
Q  100 ttgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaac 199  Q
    |||||||| |||| ||||||||||||| | ||| |||||| | |||||||||||||||||||| ||||||||||| ||||||||||  ||||||||| ||    
T  24833077 ttgcagaagactg-aaaagtgaagcaatggctactttgaagggatttgaacgcattggatgcttgttcctcaaaagagcgttgacatggtacgtttgtac 24833175  T
Q  200 gaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||||||||    
T  24833176 gaagtgtacaaccactacctcc 24833197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 15336009 - 15336228
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||  | ||||| ||||||||| ||||||||| | |||||||||||| |||||||||| | ||||||||| |||| |||||||||||||    
T  15336009 agtttatcagaagctgagaatcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaatggaatcaaactcgtctaaagat 15336108  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| ||||  ||||||||||||||||||||||||||| ||||||| ||||||||||||  ||| || ||| ||||||||||||||||||||| |||    
T  15336109 tgcagaagactgagaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttattcgtc-aaagagcgttgacaaagtacgtttgtacg 15336207  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  15336208 aagtgtacaaccactacctcc 15336228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 15425074 - 15425293
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||  | ||||| ||||||||| ||||||||| | |||||||||||| |||||||||| | ||||||||| |||| |||||||||||||    
T  15425074 agtttatcagaagctgagaatcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaatggaatcaaactcgtctaaagat 15425173  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| ||||  ||||||||||||||||||||||||||| ||||||| ||||||||||||  ||| || ||| ||||||||||||||||||||| |||    
T  15425174 tgcagaagactgagaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttattcgtc-aaagagcgttgacaaagtacgtttgtacg 15425272  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  15425273 aagtgtacaaccactacctcc 15425293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 15516378 - 15516597
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||  | ||||| ||||||||| ||||||||| | |||||||||||| |||||||||| | ||||||||| |||| |||||||||||||    
T  15516378 agtttatcagaagctgagaatcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaatggaatcaaactcgtctaaagat 15516477  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| ||||  ||||||||||||||||||||||||||| ||||||| ||||||||||||  ||| || ||| ||||||||||||||||||||| |||    
T  15516478 tgcagaagactgagaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttattcgtc-aaagagcgttgacaaagtacgtttgtacg 15516576  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  15516577 aagtgtacaaccactacctcc 15516597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 23185147 - 23185366
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||| |||||||||  ||||||| ||||||||||||||||||| | |||||||| ||| |||||||| | | || |||||||| || |||||||||  ||    
T  23185147 agttcatcagaagctgaaaatcaccagaagctgcagttcatcaggagatgcaacataaagcttcaaaggttgttcaatggatttaatctcgtctaagcat 23185246  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| |||||||||||||||||||||||| |||||||| ||||||| ||||||||||||  ||| || ||| ||||||||||||||||  ||| |||    
T  23185247 tgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcattggatgcttattcttc-aaagagcgttgacaaagtacaattgtacg 23185345  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  23185346 aagtgtacaaccactacctcc 23185366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 19943464 - 19943246
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaag-ctatttaatggattcaacctcgtctaaagattg 102  Q
    ||||||||| ||| ||||  |||||||| ||||||||| | |||||||  ||||| |||||||||| ||||| |||||||| || |||||||||  ||||    
T  19943464 atcagaagctaaagatcactagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaaggctattcaatggatttaatctcgtctaagcattg 19943365  T
Q  103 cagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaa 202  Q
    ||||| ||||||| ||||||||||| ||||||||||||| ||||||| |||||||||||| ||||||  |||||||||||||||||||   ||| |||||    
T  19943364 cagaagactggaagagtgaagcaacaactattttgaaaggatttgaaggcattggatgcttgttcctttaaaaagcgttgacaaagtaaaattgtacgaa 19943265  T
Q  203 gtgtacaaccactacctcc 221  Q
    |||||||||||||||||||    
T  19943264 gtgtacaaccactacctcc 19943246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 17797652 - 17797433
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||| |||||||||  ||||||| |||||||||||| |||||| | |||||||||||| || ||||||| | || ||||||||||| |||||||||  ||    
T  17797652 agttcatcagaagctgaaaatcaccagaagctgcagctcatcaggagatgcaacttaaagcctcaaaagttgttcaatggattcaatctcgtctaaccat 17797553  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    | ||||| ||||||||||||| |||||| ||| |||||||| | ||||| |||||||||||| |||| || ||| ||||||||||||||||  ||| |||    
T  17797552 tacagaagactggaaaagtgatgcaacggctagtttgaaaggaattgaaggcattggatgcttgttcttc-aaagagcgttgacaaagtacaattgtacg 17797454  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  17797453 aagtgtacaaccactacctcc 17797433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 36105425 - 36105206
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||  ||||||| ||||||||  ||||||||| | |||||||||||| |||||||||||| ||||| |||||||| |||||||||||||    
T  36105425 agtttatcagaagctgaaaatcaccagaagctatagttcatcaggagatgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagat 36105326  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| | |||||||||  | ||||| |||||||| ||| ||||||| |||||||||| |  ||| || ||| |||||||| | |||||||||| ||     
T  36105325 tgcagaagattggaaaagtataacaacggctattttggaaggatttgaaggcattggatgtttattcttc-aaagagcgttgatatagtacgtttgtaca 36105227  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  36105226 aagtgtacaaccactacctcc 36105206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 40845309 - 40845527
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||||||||||||| || | ||| ||||||||  ||||||||| | |||||| ||||| |||||||||| | ||||| |||||||| |||||||||||||    
T  40845309 agtttatcagaagctaagactcaccagaagctatagttcatcaggagatgcagcttaaagcttcaaaagttgtttaa-ggattcaaactcgtctaaagat 40845407  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| |||||||||||  |||||||||||||||| ||| ||| ||| ||||||||||||  ||| || ||| |||||||||| |||||| ||| |||    
T  40845408 tgcagaagactggaaaagtatagcaacgactattttggaaggattggaaggcattggatgcttattcttc-aaagagcgttgacatagtacgattgtacg 40845506  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||| ||||    
T  40845507 aagtgtacaaccactatctcc 40845527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 221
Target Start/End: Original strand, 30421354 - 30421569
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcag 105  Q
    |||||||||  ||||||| |||||||||||||||||||   |||||||| ||| |||||||| ||| || |||||||| || |||||||||  |||||||    
T  30421354 atcagaagctcaaaatcaccagaagctgcagttcatcagaagatgcaacataaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcag 30421453  T
Q  106 aatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttc-ctcaaaaaagcgttgacaaagtacgtttgaacgaagt 204  Q
    || |||||||||||||||||||||||| |||||| | ||||||| |||||||||||| ||||  |  ||| ||||||||||||||||  ||| |||||||    
T  30421454 aagactggaaaagtgaagcaacgactagtttgaatggatttgaaggcattggatgcttgttcttttcaaagagcgttgacaaagtac-attgtacgaagt 30421552  T
Q  205 gtacaaccactacctcc 221  Q
     ||||||||||||||||    
T  30421553 ttacaaccactacctcc 30421569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 16207530 - 16207317
Alignment:
Q  9 agaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcaga 106  Q
    |||||| ||| |||| ||||||||  ||||||||| | |||||||  ||||| |||||||| ||| || |||||||| || |||||||||  ||||||||    
T  16207530 agaagctaaagatcaccagaagctctagttcatcaggagatgcaagacttaaagcttcaaacgctgttcaatggatttaatctcgtctaagcattgcaga 16207431  T
Q  107 atactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgt 206  Q
    | ||||||| ||| ||||||| ||||||||||||| ||||||| |||||||||||| |||| || ||| ||||||||||||||||  ||| |||||||||    
T  16207430 agactggaagagtaaagcaactactattttgaaaggatttgaaggcattggatgcttgttcttc-aaagagcgttgacaaagtacaattgtacgaagtgt 16207332  T
Q  207 acaaccactacctcc 221  Q
    |||||||||| ||||    
T  16207331 acaaccactatctcc 16207317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 22674008 - 22673789
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||  || |||| |||||| || ||||||||  | |||||||||||| |||||||||| | ||||| |||||||| |||||||  ||||    
T  22674008 agtttatcagaagctgaagatcaccagaagttgtagttcatccggagatgcaacttaaagcttcaaaagttgtttaacggattcaaactcgtctggagat 22673909  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| ||| |||||||  ||||||  |||||||| ||| ||| |||  |||||||||||  ||| || ||| |||||||||| |||||||||| |||    
T  22673908 tgcagaagactagaaaagtatagcaacatctattttggaaggattagaagacattggatgcttattcttc-aaagagcgttgacatagtacgtttgtacg 22673810  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||| ||||    
T  22673809 aagtgtacaaccactatctcc 22673789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 39693762 - 39693546
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    |||||||||  || |||| |||||| || || |||||| | |||||||  ||||| |||||||| | | || ||||||||||| |||||||||  |||||    
T  39693762 atcagaagctgaagatcaccagaagttgtagctcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggattcaatctcgtctaagcattgc 39693663  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| ||||||| |||||||||| |||||||||||||| ||||||| |||||||||||| ||| ||   || ||||||||||||||||  ||| ||||||    
T  39693662 agaagactggaagagtgaagcaatgactattttgaaaggatttgaaagcattggatgcttgtt-ctttgaagagcgttgacaaagtacaattgtacgaag 39693564  T
Q  204 tgtacaaccactacctcc 221  Q
    ||||||||||||| ||||    
T  39693563 tgtacaaccactatctcc 39693546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 22663346 - 22663135
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||| ||||||  || ||||  ||||| || ||||||| | | |||||||||||| |||||||||||| ||||| |||||||| ||||||| |||||    
T  22663346 agtttattagaagctgaagatcactagaagttgtagttcattaggagatgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctgaagat 22663247  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| ||||||||| |  |||||| ||||||||| ||  ||| |||  |||||||||||  ||| || ||| |||||||||| |||||||||| |||    
T  22663246 tgcagaagactggaaaaatatagcaacaactattttggaaagattagaagacattggatgcttattcttc-aaagagcgttgacatagtacgtttgtacg 22663148  T
Q  201 aagtgtacaacca 213  Q
    |||||||||||||    
T  22663147 aagtgtacaacca 22663135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 6407928 - 6407737
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| ||||||||||||||||||| | |||||||||||| |||||||||||| ||||| |||||||| ||||||| |||||||||||| ||||||||||    
T  6407928 aatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagctgtttaaaggattcaaactcgtct-aagattgcagaagactggaaaag 6407830  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    |    ||||| ||||||||         ||| ||||||||||||| ||| || ||| |||||||||| |||||||||  ||||||||||||||||||| |    
T  6407829 tattacaacggctattttg---------gaaggcattggatgctaattcttc-aaagagcgttgacatagtacgtttctacgaagtgtacaaccactatc 6407740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 23263549 - 23263752
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaagg-cttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaa 116  Q
    |||||||||||||| ||||||||| | |||||||  ||||||  ||||||| | | || ||| |||| || |||||||||| | ||||||| ||| |||     
T  23263549 atcatcagaagctgaagttcatcaggagatgcaaaacttaagaacttcaaaggttgttcaatagatttaatctcgtctaaacaatgcagaagactagaag 23263648  T
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    |||||| ||| |||||||||||||| ||||||| |||||||||| | |||| || ||| ||||||||||||||||  ||| |||||||||||||||||||    
T  23263649 agtgaaacaatgactattttgaaaggatttgaaggcattggatgtttgttcttc-aaagagcgttgacaaagtacagttgtacgaagtgtacaaccacta 23263747  T
Q  217 cctcc 221  Q
    |||||    
T  23263748 cctcc 23263752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 16189162 - 16188995
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| | | ||||||||||| || |||||| ||  ||||||||| ||||||| ||||||||||||||||||||||||  ||||||| ||    
T  16189162 acttaaagcttcaaaggttgtttaatggatttaatctcgtccaaccattgcagaagactggaagagtgaagcaacgactattttgaaatgatttgaaggc 16189063  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||  ||| ||  || ||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  16189062 attggatgcttattcttc-taagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctcc 16188995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 33083070 - 33082872
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| ||||||||| ||||||||| | |||||||  ||||| |||||||| | | || |||||||| || |||||||||  ||||||||| |   ||| |    
T  33083070 atcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagatcagaaga 33082971  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| ||| ||   || ||||||||||||||||  ||| ||||||||||||||||||||    
T  33082970 gtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgtt-ctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactac 33082872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 602718 - 602860
Alignment:
Q  78 tggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaag 177  Q
    ||||||||| |||||||||  ||||||||| ||| ||| |||||||||| |||||||||||||| ||||||| |||||||||||| ||| ||   || ||    
T  602718 tggattcaatctcgtctaagcattgcagaagacttgaagagtgaagcaatgactattttgaaaggatttgaaagcattggatgcttgtt-ctttgaagag 602816  T
Q  178 cgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||  ||| ||||||||||||||||||| ||||    
T  602817 cgttgacaaagtacaattgtacgaagtgtacaaccactatctcc 602860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 19156428 - 19156207
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaac--ttaaggcttcaaaagctatttaatggattcaacctcgtctaaag 98  Q
    |||| |||||||||  || |||| |||||| || ||||||||| | |||||||   |||| |||||||| ||| || |||||||| || ||||||||       
T  19156428 agttcatcagaagctgaagatcaccagaagttgtagttcatcaagagatgcaagaattaaagcttcaaaggctgttcaatggatttaatctcgtctatgc 19156329  T
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||| ||| |||||||||||||||| |||||||| ||||||| |||||||||||| ||| ||   || ||||||||||||||||  ||| |    
T  19156328 attgcagaagactagaagagtgaagcaacgactaatttgaaaggatttgaaggcattggatgcttgtt-ctttgaagagcgttgacaaagtacaattgta 19156230  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    |||| ||||||||||||| ||||    
T  19156229 cgaaatgtacaaccactatctcc 19156207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 76 - 221
Target Start/End: Original strand, 12757759 - 12757903
Alignment:
Q  76 aatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaa 175  Q
    |||||||| || |||||||||  ||||||||| |||| || ||||||||||| ||||||||||||| ||||||| |||||||||||| ||| ||   ||     
T  12757759 aatggatttaatctcgtctaagcattgcagaagactgaaagagtgaagcaacaactattttgaaaggatttgaaggcattggatgcttgtt-ctttgaag 12757857  T
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  12757858 agcgttgacaaagtacaattgtacgaagtgtacaaccactatctcc 12757903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 21933115 - 21932894
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaag 98  Q
    |||| |||||||||  ||||||| ||||||||  | ||||||| | |||||||  ||||| |||||||| | | || |||||||| || |||||||||      
T  21933115 agttcatcagaagctgaaaatcaccagaagctctatttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagc 21933016  T
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    |||||| || |||| || |||||| ||||| |||||||||||| |||| || |||||| ||||| |||  || ||| |||||||||||||||   ||| |    
T  21933015 attgcataagactgaaagagtgaaacaacggctattttgaaaggatttaaaggcattgtatgcttgtttttc-aaagagcgttgacaaagtaaaattgta 21932917  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||||    
T  21932916 cgaagtgtacaaccactacctcc 21932894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 55 - 221
Target Start/End: Complemental strand, 17914635 - 17914470
Alignment:
Q  55 ttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcat 154  Q
    |||| |||||||||| | || |||||||| || |||||||||  ||||||||| |||| || ||||||||||| ||||||||||||| ||||||| ||||    
T  17914635 ttaaagcttcaaaagttgttcaatggatttaatctcgtctaagcattgcagaagactgtaagagtgaagcaacaactattttgaaaggatttgaaggcat 17914536  T
Q  155 tggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    | |||||| ||| ||   || ||||||||||||||||  ||| |||||||||| |||||||| ||||    
T  17914535 tagatgcttgtt-ctttgaagagcgttgacaaagtacaattgtacgaagtgtataaccactatctcc 17914470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 20255538 - 20255652
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| || ||||| ||| || |||||||| || |||||||||  ||| ||||| ||||||||||||||||||||||||||||||||| ||||||| ||    
T  20255538 acttaaagcgtcaaaggctgttcaatggatttaatctcgtctaagcattacagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggc 20255637  T
Q  153 attggatgctagttc 167  Q
    |||||||||| ||||    
T  20255638 attggatgcttgttc 20255652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 26 - 216
Target Start/End: Original strand, 16681247 - 16681438
Alignment:
Q  26 agaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaag 123  Q
    |||||||  ||||||||| | |||||||  ||||  |||||||| ||| || |||||||| || |||||||||  ||||||||| ||||||| |||||||    
T  16681247 agaagctaaagttcatcaggagatgcaagacttagagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaag 16681346  T
Q  124 caacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    ||||| ||| |||||||| ||||||| ||||| |||||| ||| ||   || |||||||||| |||||  ||| |||||||||||||||||||    
T  16681347 caacgtctagtttgaaaggatttgaaggcattagatgcttgtt-ctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccacta 16681438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 6 - 208
Target Start/End: Original strand, 18121033 - 18121236
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    ||||||||| ||| |||| ||||||||  ||||||||| | |||||||  ||||| | |||||| ||| || |||||||| || |||||||||  |||||    
T  18121033 atcagaagctaaagatcaccagaagctctagttcatcaggagatgcaagacttaaagtttcaaaggctgttcaatggatttaatctcgtctaagcattgc 18121132  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| ||| ||| |||||||||||  |||||||||||| |||| || |||||||||||| |||| || ||| ||| || |||||||||  ||| ||||||    
T  18121133 agaagactagaagagtgaagcaactgctattttgaaaggatttaaaggcattggatgcttgttcttc-aaagagcattaacaaagtacaattgtacgaag 18121231  T
Q  204 tgtac 208  Q
    |||||    
T  18121232 tgtac 18121236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 14989399 - 14989591
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| ||||||||||| ||||||| | |||||||||||| |||||||||||  ||||| |||||||| ||||||| |||||||| ||| | ||||||||    
T  14989399 aatcaccagaagctgcaattcatcaggagatgcaacttaaagcttcaaaagccgtttaaaggattcaaactcgtctgaagattgctgaagattggaaaag 14989498  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    |  | ||||| ||| ||||         ||| ||||||||||||  ||| || ||| |||||||||| |||||||||| ||||| ||||||||||||| |    
T  14989499 tataacaacggctaatttg---------gaaggcattggatgcttattcttc-aaagagcgttgacatagtacgtttgtacgaattgtacaaccactatc 14989588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 43639985 - 43639864
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagt 119  Q
    |||| |||||| |||||||||||||| |||||||||||| |||||||||| | ||| | |||||||| |||| ||||| |||||| || |||||||||||    
T  43639985 atcaccagaagatgcagttcatcatgagatgcaacttaaagcttcaaaagttgtttcaaggattcaaactcgcctaaaaattgcaaaagactggaaaagt 43639886  T
Q  120 gaagcaacgactattttgaaag 141  Q
        ||||||||||||||||||    
T  43639885 atgacaacgactattttgaaag 43639864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 76 - 216
Target Start/End: Original strand, 17525725 - 17525864
Alignment:
Q  76 aatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaa 175  Q
    |||||||| ||  ||||||||  | ||||||| ||||||| |||||| |||| ||||||||||||| ||||||| |||||||||||| ||| ||   ||     
T  17525725 aatggatttaatatcgtctaagcactgcagaagactggaagagtgaaacaacaactattttgaaaggatttgaaagcattggatgcttgtt-ctttgaag 17525823  T
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    ||||||||||||||||  ||| || ||||||||||||||||    
T  17525824 agcgttgacaaagtacaattgtacaaagtgtacaaccacta 17525864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 17701923 - 17701756
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| | | || |||| ||| || |||||||||  ||||||||| |   ||| ||||||||||| ||||||||||||| ||||||| ||    
T  17701923 acttaaagcttcaaaggttgttcaatgaatttaatctcgtctaagcattgcagaagatcagaagagtgaagcaacaactattttgaaaggatttgaaggc 17701824  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||| |||||   || ||||||| |||||||   ||| ||||||| ||||||||||||||||    
T  17701823 attggatgctaattcct-ttaagagcgttggcaaagtataattgtacgaagtttacaaccactacctcc 17701756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 73 - 213
Target Start/End: Complemental strand, 29693473 - 29693334
Alignment:
Q  73 tttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaa 172  Q
    ||||||| ||| || |||||||||  ||||||||| |||| || ||||||||||| ||||||||||||| ||||||| |||||| ||||| |||| |  |    
T  29693473 tttaatgaatttaatctcgtctaagcattgcagaagactgaaagagtgaagcaaccactattttgaaaggatttgaaagcattgtatgcttgttctttga 29693374  T
Q  173 aaaagcgttgacaaagtacgtttgaacgaagtgtacaacca 213  Q
    | | || ||||||||||||  ||| ||||||||||||||||    
T  29693373 aga-gctttgacaaagtacaattgtacgaagtgtacaacca 29693334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 3598267 - 3598373
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||| |||||||||  | ||||| |||||| || ||||||||| | |||||||||||| |||||||||| | |||||  ||||||| |||||||||||||    
T  3598267 agttcatcagaagctgagaatcaccagaagttgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaacagattcaaactcgtctaaagat 3598366  T
Q  101 tgcagaa 107  Q
    |||||||    
T  3598367 tgcagaa 3598373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 221
Target Start/End: Original strand, 17441732 - 17441947
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    |||||||||  || |||| ||||||||  ||||||||| | |||||||  ||||| |||| ||| | | || |||||| | || ||| |||||  |||||    
T  17441732 atcagaagctgaagatcaccagaagctctagttcatcaggagatgcaagacttaaagctttaaaggttgttcaatggacttaatctcctctaagcattgc 17441831  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| ||||||| | | ||||||||||||||||||||| ||||||| ||||||||||||  || ||   || ||||||||||||||||  ||| || |||    
T  17441832 agaagactggaagactaaagcaacgactattttgaaaggatttgaa-gcattggatgcttatt-ctttgaagagcgttgacaaagtacaattgtactaag 17441929  T
Q  204 tgtacaaccactacctcc 221  Q
    ||||||||||||| ||||    
T  17441930 tgtacaaccactatctcc 17441947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 20382332 - 20382534
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| ||||||||| ||||||||| | |||||||  ||||| |||||||| ||| || ||||||||||| |||||| |   |||||| || ||| ||  |    
T  20382332 atcaccagaagctgaagttcatcaggagatgcaagtcttaaagcttcaaaggctgttcaatggattcaatctcgtccatgcattgcaaaagactagagga 20382431  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    ||||||||||| ||||| |||||| ||||||| | | |||||| | ||| ||   || |||||||||| |||||  ||| |||||||||||||||||||     
T  20382432 gtgaagcaacggctattctgaaaggatttgaaagtagtggatgtttgtt-ctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactat 20382530  T
Q  218 ctcc 221  Q
    ||||    
T  20382531 ctcc 20382534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 216
Target Start/End: Complemental strand, 18679968 - 18679831
Alignment:
Q  78 tggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaag 177  Q
    ||||||||| |||||||||  |||||| || ||  ||  ||| |||||||||||||||||| || ||||||| |||||||||||| ||| ||   || ||    
T  18679968 tggattcaatctcgtctaagcattgcaaaagaccagaggagtaaagcaacgactattttgataggatttgaaagcattggatgcttgtt-ctttgaagag 18679870  T
Q  178 cgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    |||||||| |||||  ||| |||||||||||||||||||    
T  18679869 cgttgacatagtacaattgtacgaagtgtacaaccacta 18679831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 221
Target Start/End: Complemental strand, 18719115 - 18719012
Alignment:
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    |||||||||||||||||||||| || ||||||| |||||||||||| ||| ||   || ||||||| || |||||  ||| |||||||||||||||||||    
T  18719115 agtgaagcaacgactattttgataggatttgaaagcattggatgcttgtt-ctttgaagagcgttgtcatagtacaattgtacgaagtgtacaaccacta 18719017  T
Q  217 cctcc 221  Q
     ||||    
T  18719016 tctcc 18719012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 18722683 - 18722728
Alignment:
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgct 162  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  18722683 agtgaagcaacgactattttgaaagaatttgaaggcattagatgct 18722728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 18731028 - 18731073
Alignment:
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgct 162  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  18731028 agtgaagcaacgactattttgaaagaatttgaaggcattagatgct 18731073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 221
Target Start/End: Complemental strand, 24646567 - 24646349
Alignment:
Q  4 ttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaac--ttaaggcttcaaaagctatttaatggattcaacctcgtctaaagatt 101  Q
    |||||||||||  || |||| ||||||||  ||||||||| | |||||||   |||| |||||||| | | || ||| |||| || |||||||||  |||    
T  24646567 ttatcagaagctgaagatcaccagaagctctagttcatcaagagatgcaagagttaaagcttcaaaggttgttcaattgatttaatctcgtctaagcatt 24646468  T
Q  102 gcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacga 201  Q
    ||| || |||  || |||| ||||||  |||||||||||| ||||| | ||||||||||||  || ||   || || |||||||||||||  ||| ||||    
T  24646467 gcataagactaaaagagtgtagcaacagctattttgaaaggatttgcaggcattggatgcttatt-ctttgaagagtgttgacaaagtacaattgtacga 24646369  T
Q  202 agtgtacaaccactacctcc 221  Q
    ||||||||||||||| ||||    
T  24646368 agtgtacaaccactatctcc 24646349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 18151604 - 18151786
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| |||||| ||||||||||||   |||||||||||| ||||||||||          ||||||| ||||||| |||||||||||| ||||||||||    
T  18151604 aatcaccagaagttgcagttcatcagaagatgcaacttaaagcttcaaaag----------gattcaaactcgtctgaagattgcagaagactggaaaag 18151693  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    |  | ||||||||| ||||         ||| ||||||||||||  ||| || ||| ||| |||||| |||||||||| ||||| ||||||||||||| |    
T  18151694 tataacaacgactaatttg---------gaaggcattggatgcttattcttc-aaagagcattgacatagtacgtttgtacgaattgtacaaccactatc 18151783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 33560295 - 33560360
Alignment:
Q  151 gcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    ||||||||||||| ||| ||||| | ||||||||| | |||||||| ||||||||||||||||||||    
T  33560295 gcattggatgctaattcttcaaaga-gcgttgacataatacgtttgtacgaagtgtacaaccactac 33560360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 13430696 - 13430764
Alignment:
Q  148 aacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    |||||||||||||||  ||| ||||| | | ||||||| |||||||||| ||||||||||||||||||||    
T  13430696 aacgcattggatgcttattcttcaaaga-gtgttgacatagtacgtttgtacgaagtgtacaaccactac 13430764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 18685434 - 18685479
Alignment:
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgct 162  Q
    ||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  18685434 agtgaagcaacaactattttgaaagaatttgaaggcattagatgct 18685479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 21301224 - 21301037
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagt 119  Q
    |||| ||||||||||||||||||| |  ||  |||| || | |||||||||| ||| |  || || | |||| ||||||||||||||| | |||||||||    
T  21301224 atcaccagaagctgcagttcatcaggaaattgaactcaaagtttcaaaagctgtttcaatgactctaactcgcctaaagattgcagaagattggaaaagt 21301125  T
Q  120 gaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
       |||||| |||||||||||          ||||||||||||   |||||||| | ||||||||| |||||||||| || |||||||||||||||||    
T  21301124 atggcaacggctattttgaaat---------gcattggatgcttactcctcaaaga-gcgttgacatagtacgtttgtacaaagtgtacaaccactac 21301037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 17267686 - 17267485
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| ||||||||| ||||||||| | |||||||  ||||| |||||||| | | || ||||| ||||| |||||| ||  |||||| || || | |  |    
T  17267686 atcaccagaagctgaagttcatcaagagatgcaagacttaaagcttcaaaggttgttcaatgg-ttcaatctcgtccaagcattgcaaaagaccgcagga 17267588  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    ||||||||||  |||||||||||| ||||||| ||||| |||||| |||| |  || | || |||||| |||||  ||| ||||| |||||||||||||     
T  17267587 gtgaagcaacagctattttgaaaggatttgaaagcattagatgcttgttctttgaaga-gcattgacatagtacaattgtacgaattgtacaaccactat 17267489  T
Q  218 ctcc 221  Q
    ||||    
T  17267488 ctcc 17267485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 217
Target Start/End: Complemental strand, 19707638 - 19707521
Alignment:
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||  ||| |||||||||||| ||| ||  || ||||||||| |||||| ||| | |||| |  || || ||||||||||||||  ||| |    
T  19707638 attgcagaagaccagaagagtgaagcaacggctaattcaaatgaatttgaaggcattgaatggttgttctttgaagaa-cgttgacaaagtacaattgta 19707540  T
Q  199 cgaagtgtacaaccactac 217  Q
    |||||||||||||||||||    
T  19707539 cgaagtgtacaaccactac 19707521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 221
Target Start/End: Complemental strand, 43645028 - 43644907
Alignment:
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||  ||| ||||||| |||| ||| ||  || ||||||||| |||||||||||| |||| |  || | ||||| | |||||||  ||| |    
T  43645028 attgcagaagaccagaagagtgaagaaacggctaattcaaatgaatttgaaggcattggatgcttgttctttgaaga-gcgttaataaagtacaattgta 43644930  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||||    
T  43644929 cgaagtgtacaaccactacctcc 43644907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 217
Target Start/End: Complemental strand, 21288537 - 21288418
Alignment:
Q  88 ctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaa 187  Q
    |||| ||||||||||||||| |||||||||||   |||||| |||||||||         || | ||||||||||   ||||| ||| |||||||||| |    
T  21288537 ctcgcctaaagattgcagaagactggaaaagtatggcaacggctattttga---------aatgtattggatgcttactcctc-aaagagcgttgacata 21288448  T
Q  188 gtacgtttgaacgaagtgtacaaccactac 217  Q
    || |||||| ||||||||||||||||||||    
T  21288447 gttcgtttgtacgaagtgtacaaccactac 21288418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 161; Significance: 5e-86; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 53056649 - 53056868
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||    
T  53056649 agtttatcagaagccaaaaatcactagaagctgcagttcatcatgggatgcaacttaaggtttcaaaagctgtttaatggattcaacatcgtctaaagat 53056748  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||| || ||| |||||| |||||||||||||| |||    
T  53056749 tgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttcttc-aaagagcgtttacaaagtacgtttgtacg 53056847  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  53056848 aagtgtacaaccactacctcc 53056868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 29855647 - 29855427
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  29855647 agtttatcggaagccaaaaatcaccaaaacctgcagttcatcatgggatgcaacttaagacttcaaaagctgtttaatggattcaacctcgtctaaagat 29855548  T
Q  101 tgcagaatact-ggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaac 199  Q
    ||||||| |||   ||||||||||||||| ||| |||||||||||||||| |||||||||||| |||| || |||||||||||||| |||||||||| ||    
T  29855547 tgcagaagactaaaaaaagtgaagcaacggctagtttgaaagaatttgaaggcattggatgcttgttcttc-aaaaagcgttgacagagtacgtttgtac 29855449  T
Q  200 gaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||||||||    
T  29855448 gaagtgtacaaccactacctcc 29855427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 2785302 - 2785082
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||| ||||||  | ||||| |||||| || ||||||||| | |||||||||||| |||||||||| | ||||| |||||||| |||||||||||||    
T  2785302 agtttattagaagctgagaatcaccagaagttgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaacggattcaaactcgtctaaagat 2785203  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||| |||||||||| |||    
T  2785202 tgcagaagactggaaaagtgaagcaacaactattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacatagtacgtttgtacg 2785103  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  2785102 aagtgtacaaccactacctcc 2785082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 33583464 - 33583247
Alignment:
Q  5 tatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatgg-attcaacctcgtctaaagattgc 103  Q
    |||||||||| |||||||| || ||| || |||||||||  |||||||||||||||||||||||| | ||| |||| ||||||||| |||||| |||||     
T  33583464 tatcagaagctaaaaatcaccaaaagttgtagttcatcagaggatgcaacttaaggcttcaaaagttgttttatgggattcaaccttgtctaaggattgt 33583365  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||    
T  33583364 agaagactggaaaagtgaagcaacggctattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgtacgaag 33583265  T
Q  204 tgtacaaccactacctcc 221  Q
    ||||||||||||||||||    
T  33583264 tgtacaaccactacctcc 33583247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 6 - 221
Target Start/End: Original strand, 20627358 - 20627572
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcag 105  Q
    |||||||||  ||||||| |||||| |||||||||||| | |||||||||||| |||||||||| | |||||||||||||| ||||||||| ||||||||    
T  20627358 atcagaagctgaaaatcaccagaagttgcagttcatcaggagatgcaacttaaagcttcaaaagatgtttaatggattcaaactcgtctaatgattgcag 20627457  T
Q  106 aatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtg 205  Q
    || ||||||||||||||||||| ||||||||||| | ||||||| |||||||||||| |||  || ||| ||||||||||||||||||||| ||||||||    
T  20627458 aagactggaaaagtgaagcaacaactattttgaatggatttgaaggcattggatgcttgtttatc-aaagagcgttgacaaagtacgtttgtacgaagtg 20627556  T
Q  206 tacaaccactacctcc 221  Q
    ||||||||||||||||    
T  20627557 tacaaccactacctcc 20627572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 14955664 - 14955445
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||  | ||||| |||||| |||||||||||| | |||| |||| || |||||||||||| |||||||||||||| |||||||||||||    
T  14955664 agtttatcagaagctgagaatcaccagaagttgcagttcatcaggagatgtaactcaaagcttcaaaagctgtttaatggattcaaactcgtctaaagat 14955565  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| |||||||| || ||||||| ||||||||||||| ||||||| ||||||||||||  ||| || ||| ||||||||||||||||||||| |||    
T  14955564 tgcagaagactggaaaggtaaagcaacaactattttgaaagtatttgaaggcattggatgcttattcttc-aaagagcgttgacaaagtacgtttgtacg 14955466  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  14955465 aagtgtacaaccactacctcc 14955445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 24775454 - 24775671
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgc--agttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaag 98  Q
    ||||||||| ||||  | ||||| ||||||||||  ||||||||| | |||||||||||| |||||||||||| ||||| |||||||| |||||||||||    
T  24775454 agtttatcacaagctgagaatcaccagaagctgcgcagttcatcaggagatgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag 24775553  T
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| ||||||| |||||| |||||  ||| || ||| ||| ||||||||||||||||| |    
T  24775554 attgcagaagactggaaaagtgaagcaacaactattttgaaaggatttgaaggcattgaatgcttattcttc-aaagagctttgacaaagtacgtttgta 24775652  T
Q  199 cgaagtgtacaaccactac 217  Q
    |||||||||||||||||||    
T  24775653 cgaagtgtacaaccactac 24775671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 17 - 221
Target Start/End: Complemental strand, 11223784 - 11223581
Alignment:
Q  17 aaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaa 116  Q
    ||||||| ||||||| ||||||||||| | ||| ||||||   |||||||||||| || ||||| ||||| ||||||||   ||||||||| |||| |||    
T  11223784 aaaatcaccagaagcagcagttcatcaggagatacaactttgagcttcaaaagctgttcaatgggttcaatctcgtctatgcattgcagaagactgaaaa 11223685  T
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||| |||| || ||| ||||||||||||||| ||||| |||||||||||||||||||    
T  11223684 agtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttcttc-aaagagcgttgacaaagtatgtttgtacgaagtgtacaaccacta 11223586  T
Q  217 cctcc 221  Q
     ||||    
T  11223585 tctcc 11223581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 47207939 - 47207724
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaag-attgca 104  Q
    |||||||||  ||||||| ||||||||||||||||||| | |||||||| |||  ||||||| | | || |||||||| || ||||||||||| ||||||    
T  47207939 atcagaagctgaaaatcaccagaagctgcagttcatcaggagatgcaacataaaacttcaaaggttgttcaatggatttaatctcgtctaaagcattgca 47207840  T
Q  105 gaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagt 204  Q
    ||| |||||||||||||||||||| ||| |||||||  ||||||| |||||||||||| |||| || ||| ||||||||||||||||  ||| |||||||    
T  47207839 gaagactggaaaagtgaagcaacggctagtttgaaatgatttgaaggcattggatgcttgttcttc-aaagagcgttgacaaagtacaattgtacgaagt 47207741  T
Q  205 gtacaaccactacctcc 221  Q
    |||||||||||||||||    
T  47207740 gtacaaccactacctcc 47207724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 5213791 - 5213595
Alignment:
Q  23 atcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaa 122  Q
    ||||||||||| ||||||||| | |||||||||||| |||||||||||| ||||| |||||||| ||||| |||||||||||||| |||||||||||  |    
T  5213791 atcagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtataaagattgcagaagactggaaaagtata 5213692  T
Q  123 gcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||| ||||||||| ||| ||||||| ||||| ||||||  ||  ||  ||||||||||||  |||||||||| ||||||||||||||||||||||||    
T  5213691 gcaacaactattttggaaggatttgaaggcattagatgcttattattc--aaaagcgttgacgtagtacgtttgtacgaagtgtacaaccactacctcc 5213595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 40800106 - 40799892
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcag 105  Q
    |||||||||  ||||||| ||||||||||||||||||| | |||||| | ||| |||||||| ||| || |||||||| || |||||||||  |||||||    
T  40800106 atcagaagctgaaaatcaccagaagctgcagttcatcaagagatgcatcataaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcag 40800007  T
Q  106 aatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtg 205  Q
    || |||||||||| ||||||||||||| |||||||| ||||||| | ||||||| || |||| || ||| ||||||||||||||||  ||| ||||||||    
T  40800006 aagactggaaaagcgaagcaacgactagtttgaaagtatttgaaggaattggatacttgttcttc-aaagagcgttgacaaagtacaattgtacgaagtg 40799908  T
Q  206 tacaaccactacctcc 221  Q
    ||||||||||||||||    
T  40799907 tacaaccactacctcc 40799892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 221
Target Start/End: Original strand, 46349782 - 46349985
Alignment:
Q  17 aaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaa 116  Q
    ||||||| |||||| |||||||||||| | || |||||||||| ||||||||| | || ||| ||| ||| |||||||||  ||||||||| ||||||||    
T  46349782 aaaatcaccagaagttgcagttcatcaggagaagcaacttaagacttcaaaagttgttcaattgatccaatctcgtctaagcattgcagaagactggaaa 46349881  T
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||| |||| ||| | || | ||||||||||||| ||| ||||||||||||||||||     
T  46349882 agtgaagcaacgactaatttgaaaggatttgaaggcattggatgcttgttcttcagagaa-cattgacaaagtacgattgtacgaagtgtacaaccactg 46349980  T
Q  217 cctcc 221  Q
    |||||    
T  46349981 cctcc 46349985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 6 - 221
Target Start/End: Original strand, 47405348 - 47405562
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcag 105  Q
    |||||||||  ||||||| ||||||||||||||||||| | |||||||| ||| |||||||| ||| || |||||||| || |||||||||  |||||||    
T  47405348 atcagaagctgaaaatcaccagaagctgcagttcatcacgagatgcaacataaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcag 47405447  T
Q  106 aatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtg 205  Q
    || ||||||||| ||||||||| |||| |||||||| ||||||| ||||| |||| | |||| || ||| || |||||||||||||  ||| ||||||||    
T  47405448 aagactggaaaaatgaagcaacaactagtttgaaaggatttgaaggcatttgatgtttgttcttc-aaagagtgttgacaaagtacaattgtacgaagtg 47405546  T
Q  206 tacaaccactacctcc 221  Q
    ||||||||||||||||    
T  47405547 tacaaccactacctcc 47405562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 173
Target Start/End: Complemental strand, 11869300 - 11869133
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcag 105  Q
    |||||||||  ||||||| ||||||||||||||||||| ||||||||||||||||||||||||  | ||||||| |||||| |||||||||  | | |||    
T  11869300 atcagaagctgaaaatcaccagaagctgcagttcatcaggggatgcaacttaaggcttcaaaatttgtttaatgaattcaatctcgtctaagaaatacag 11869201  T
Q  106 aatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaa 173  Q
    || |||||||||||||||||||| ||| |||||||| ||||||| |||||||||||| |||| |||||    
T  11869200 aagactggaaaagtgaagcaacgtctagtttgaaaggatttgaaggcattggatgcttgttcttcaaa 11869133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 221
Target Start/End: Complemental strand, 22140981 - 22140782
Alignment:
Q  21 tcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtg 120  Q
    |||||||||||| |||||||||| | |||||||||||| | |||||||||| || || |||||||| |||| |||| |||||||||| ||| || |||||    
T  22140981 tcatcagaagctacagttcatcaggagatgcaacttaaagtttcaaaagctgttcaacggattcaaactcgcctaaggattgcagaagactagataagtg 22140882  T
Q  121 aagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctc 220  Q
    || |||||||||||||||| |  ||||||  ||||||||||| |||| || ||| |||||||||| ||||||| || |||||||||| ||||||||||||    
T  22140881 aaccaacgactattttgaagggttttgaaaacattggatgcttgttcttc-aaagagcgttgacatagtacgtatgtacgaagtgtataaccactacctc 22140783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 60 - 221
Target Start/End: Complemental strand, 41495177 - 41495017
Alignment:
Q  60 gcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggat 159  Q
    |||||||| ||| || |||||||| || |||||||||| ||||||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||||||    
T  41495177 gcttcaaaggctgttcaatggatttaatctcgtctaaacattgcagaagactggaagagtgaagcaacgactattttgaaaggatttgaaggcattggat 41495078  T
Q  160 gctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||| ||| ||   || ||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  41495077 gcttgtt-ctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctcc 41495017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 89 - 217
Target Start/End: Complemental strand, 50300372 - 50300245
Alignment:
Q  89 tcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaag 188  Q
    |||||||| |||||||||| |||||||||||||||||||  |||||| ||| | ||||||||||||||||||   ||||||||||| |||||||||||||    
T  50300372 tcgtctaaggattgcagaagactggaaaagtgaagcaactgctattt-gaagggatttgaacgcattggatgtatgttcctcaaaagagcgttgacaaag 50300274  T
Q  189 tacgtttgaacgaagtgtacaaccactac 217  Q
    |||||||| ||||||||||||||||||||    
T  50300273 tacgtttgtacgaagtgtacaaccactac 50300245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 2561427 - 2561206
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaag 98  Q
    |||| |||||||||  | ||||| ||||||||  ||||||||| | |||||||  ||||| |||||||| | | || |||||||| || |||||||||      
T  2561427 agttcatcagaagctgagaatcaccagaagctctagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagc 2561328  T
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||| |||||||   |||||||||| |||| || ||| | ||||||||||||||   || |    
T  2561327 attgcagaagactggaagagtgaagcaacaactattttgaaaggatttgaagaaattggatgcttgttcttc-aaagatcgttgacaaagtacaagtgta 2561229  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||||    
T  2561228 cgaagtgtacaaccactacctcc 2561206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 21 - 221
Target Start/End: Original strand, 18142692 - 18142893
Alignment:
Q  21 tcatcagaagctgcagttcatcatgggatgcaac--ttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||||||||||  ||||||||| | |||||||   |||| |||||||| |||||| ||||||||||| ||||| | |  ||||||||| ||||||| ||    
T  18142692 tcatcagaagctctagttcatcaggagatgcaagatttaaagcttcaaaggctattcaatggattcaatctcgtttgagcattgcagaagactggaagag 18142791  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    ||||||||| ||||||||||||| |||| || |||||| |||||  ||| || ||| |||||| |||||||||  ||| |||||||||||||||||||||    
T  18142792 tgaagcaacaactattttgaaaggatttaaaggcattgaatgctttttcttc-aaagagcgtttacaaagtacaattgtacgaagtgtacaaccactacc 18142890  T
Q  219 tcc 221  Q
    |||    
T  18142891 tcc 18142893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 17 - 221
Target Start/End: Complemental strand, 28582329 - 28582124
Alignment:
Q  17 aaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactgga 114  Q
    ||||||| ||||||||  | ||||||| | |||||||  ||||| |||||||| ||| || |||||||| || ||||||||   ||||||||| | ||||    
T  28582329 aaaatcaccagaagctctatttcatcaggagatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtctatgcattgcagaagattgga 28582230  T
Q  115 aaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccac 214  Q
    | ||||||||||||||||||||||||| |||| |  |||||||||||| |||| || ||| |||||||||||| |||  ||| |||||||||||||||||    
T  28582229 agagtgaagcaacgactattttgaaaggatttaatggcattggatgcttgttcttc-aaagagcgttgacaaaatacaattgtacgaagtgtacaaccac 28582131  T
Q  215 tacctcc 221  Q
    |||||||    
T  28582130 tacctcc 28582124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 21641085 - 21640885
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| |||||| |||||||||||| | |||||||||||| || ||||||||| ||| | |||||||| |||| || ||||||| |||| ||||||||||    
T  21641085 aatcaccagaagttgcagttcatcaggagatgcaacttaaagcctcaaaagctgtttcaaggattcaaactcgcct-aagattgtagaagactggaaaag 21640987  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    |  ||||||| |||||||| ||| |||  || ||||||||||||  ||  || ||| |||||||||| |||||||||  ||||||||||||||||||| |    
T  21640986 tatagcaacggctattttggaaggattgaaaagcattggatgcttatttttc-aaagagcgttgacatagtacgtttttacgaagtgtacaaccactatc 21640888  T
Q  219 tcc 221  Q
    |||    
T  21640887 tcc 21640885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 217
Target Start/End: Complemental strand, 13824254 - 13824091
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| | | || |||||||| || |||||||||| | || |||| ||||||| ||||||||||| ||||||||||||  ||||||| ||    
T  13824254 acttaaagcttcaaaggttgttcaatggatttaatctcgtctaaacaatgaagaagactggaagagtgaagcaacaactattttgaaatgatttgaaggc 13824155  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    |||||||| | |||| || ||| ||||||||||||||||  ||| ||||||||||||||||||||    
T  13824154 attggatgtttgttcttc-aaagagcgttgacaaagtacaattgtacgaagtgtacaaccactac 13824091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 14969512 - 14969345
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| | | || |||||||| || |||||||||  ||||||||| ||||||| ||| ||||||| ||||||||||||| ||||||  ||    
T  14969512 acttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtaaagcaacaactattttgaaaggatttgatggc 14969413  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||  ||| || ||| |||||||||||||||| |||  ||||||||||||||||||| ||||    
T  14969412 attggatgcttattcttc-aaatagcgttgacaaagtacatttttacgaagtgtacaaccactatctcc 14969345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 49553428 - 49553630
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| ||||||| | ||||||||| | |||||||  ||||| | |||||| ||| |||||| |||| ||| ||||||||  ||||||||| | || || |    
T  49553428 atcaccagaagccgaagttcatcaggagatgcaagacttaaagtttcaaaggctgtttaatagatttaacatcgtctaagcattgcagaagattgaaaga 49553527  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    ||||||||  |||||||||||||| ||||||| |||||||||| | |||| || | | ||||||||||||||||  ||| ||||||||||||||||||||    
T  49553528 gtgaagcagtgactattttgaaaggatttgaaggcattggatgtttgttcttc-agagagcgttgacaaagtacaattgtacgaagtgtacaaccactac 49553626  T
Q  218 ctcc 221  Q
    ||||    
T  49553627 ctcc 49553630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 49642701 - 49642903
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| |||||| || ||||||||| | |||||||  ||||| |||||||| | | || ||| |||| || |||||||||  ||||||||| ||||||| |    
T  49642701 atcaccagaagttgtagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatagatttaatctcgtctaagcattgcagaagactggaaga 49642800  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    |||||||||||||||||||||||| ||||||| |||||||||| | ||| ||   || ||||||||||||||||  ||| || ||||||||||||||||     
T  49642801 gtgaagcaacgactattttgaaaggatttgaaggcattggatgattgtt-cttttaagagcgttgacaaagtacaattgtacaaagtgtacaaccactat 49642899  T
Q  218 ctcc 221  Q
    ||||    
T  49642900 ctcc 49642903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 18121542 - 18121763
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaac--ttaaggcttcaaaagctatttaatggattcaacctcgtctaaag 98  Q
    |||| |||| |||| ||| |||| ||||||||  ||||||||| | |||||||   |||| |||||||| | | || ||||||||||| ||||| | |      
T  18121542 agttcatcataagctaaagatcaccagaagctctagttcatcaggagatgcaagatttaaagcttcaaaggttgttcaatggattcaatctcgtttgagc 18121641  T
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||| |||| || |||||| |||||  ||| || ||| |||||| |||||||||  ||| |    
T  18121642 attgcagaagactggaagagtgaagcaacaactattttgaaaggatttaaaggcattgaatgctttttcttc-aaagagcgtttacaaagtacaattgta 18121740  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||||    
T  18121741 cgaagtgtacaaccactacctcc 18121763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 6090966 - 6090750
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    |||||||||  || |||| ||||||||| ||||||||| | |||||||  |||||  ||||||| | |  | |||||||| || |||||||||  |||||    
T  6090966 atcagaagcagaagatcaccagaagctgaagttcatcaggagatgcaagacttaaaacttcaaaggttgctcaatggatttaatctcgtctaagcattgc 6090867  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| ||| ||| |||||||||||  ||| |||||||| ||||||| |||||| ||||| ||| ||  ||||||| ||||||||||||  ||| ||||||    
T  6090866 agaagactagaagagtgaagcaacatctaatttgaaaggatttgaaggcattgaatgcttgtt-ctttaaaaagctttgacaaagtacaattgtacgaag 6090768  T
Q  204 tgtacaaccactacctcc 221  Q
    ||||||||||||||||||    
T  6090767 tgtacaaccactacctcc 6090750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 221
Target Start/End: Original strand, 38177568 - 38177784
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    |||||||||  || |||||||||||||  |||| || | | |||||||  ||||| |||||||| | | || |||| ||| || ||||||| |  | |||    
T  38177568 atcagaagcagaagatcatcagaagctctagtttattaggagatgcaagacttaaagcttcaaaggttgttcaatgaatttaatctcgtctgagcaatgc 38177667  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| | ||||| ||||||||||| ||||||||||||| ||||||| |||||||||||| ||| ||  ||| ||||||||||||||||  ||| ||||||    
T  38177668 agaagattggaagagtgaagcaacaactattttgaaaggatttgaaggcattggatgcttgtt-ctttaaagagcgttgacaaagtacaattgtacgaag 38177766  T
Q  204 tgtacaaccactacctcc 221  Q
    ||||||||||||||||||    
T  38177767 tgtacaaccactacctcc 38177784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 49666355 - 49666476
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| ||||||||||||||||||| | |||||||||||| |||||||||| | ||| | |||||||| ||||||| |||||||||||| ||||||||||    
T  49666355 aatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggattcaaactcgtct-aagattgcagaagactggaaaag 49666453  T
Q  119 tgaagcaacgactattttgaaag 141  Q
    |  | ||||||||||||||||||    
T  49666454 tataacaacgactattttgaaag 49666476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 76 - 221
Target Start/End: Complemental strand, 37467495 - 37467351
Alignment:
Q  76 aatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaa 175  Q
    |||||||| || ||| |||||  |||| |||| ||||||| ||||||||||||||||||||||||| ||||||| |||||||||||| ||| ||   ||     
T  37467495 aatggatttaatctcatctaagcattgtagaagactggaagagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgtt-ctttgaag 37467397  T
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  37467396 agcgttgacaaagtacaattgtacgaagtgtacaaccactatctcc 37467351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 12726204 - 12726371
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| |||||| ||||||||||| |||||||||   |||||||| ||| ||| ||||||| ||||||||||||||||| ||||||| ||    
T  12726204 acttaaagcttcaaaggctattcaatggattcaatctcgtctaagctttgcagaagactagaagagtgaagtaacgactattttgaaaggatttgaaagc 12726303  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||   | ||  ||| || ||| |||||||||  ||| || |||||||||||||||||||||    
T  12726304 attggatgcttact-ctttaaagagagttaacaaagtacaattgtacaaagtgtacaaccactacctcc 12726371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 213
Target Start/End: Complemental strand, 13948570 - 13948362
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    |||||||||  || |||| ||||||||  || |||||| | |||||||  ||||| || ||||| | | || ||| |||| || |||||||||  |||||    
T  13948570 atcagaagctgaagatcaccagaagctaaagctcatcaggagatgcaagacttaaagcgtcaaaggatgttcaattgatttaatctcgtctaagcattgc 13948471  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| ||||||| ||||||||||||||||||||||||| ||||||| |||||||||||| ||| ||   || |||||||||| |||||  ||| ||||||    
T  13948470 agaagactggaatagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgtt-ctttgaagagcgttgacatagtacaattgtacgaag 13948372  T
Q  204 tgtacaacca 213  Q
    ||||||||||    
T  13948371 tgtacaacca 13948362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 13780593 - 13780725
Alignment:
Q  88 ctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaa 187  Q
    |||||||||  ||||||||| |||| || ||||||||||||||||||||||||| ||||||| |||||||||||| |||  |   || ||||||||||||    
T  13780593 ctcgtctaagcattgcagaagactgaaagagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgtt-atttgaagagcgttgacaaa 13780691  T
Q  188 gtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||  ||| ||||||||||||||||||| ||||    
T  13780692 gtacaattgtacgaagtgtacaaccactatctcc 13780725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 76 - 221
Target Start/End: Original strand, 14393001 - 14393145
Alignment:
Q  76 aatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaa 175  Q
    |||||||| || |||||||||  ||||||||| ||  ||| |||||| |||||||||||||||||| ||||||| |||||||||||| ||| ||   ||     
T  14393001 aatggatttaatctcgtctaagcattgcagaagaccagaagagtgaaacaacgactattttgaaaggatttgaaagcattggatgcttgtt-ctttgaag 14393099  T
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  14393100 agcgttgacaaagtacaattgtacgaagtgtacaaccactatctcc 14393145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 15903384 - 15903216
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| ||| || ||||||||||| |||||||||  ||| ||||| ||| ||| ||||||||||||||||||||||||| ||||||| ||    
T  15903384 acttaaagcttcaaacgctgttcaatggattcaatctcgtctaagcattacagaagactagaagagtgaagcaacgactattttgaaaggatttgaaagc 15903285  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||| |||||   | ||   || ||| ||||||||||||  ||| |||||||||||||| |||| ||||    
T  15903284 attgcatgctttgttctttgaagagcattgacaaagtacaattgtacgaagtgtacaacaactatctcc 15903216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 17238896 - 17239063
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| |||  | |||||||| || |||||||||  ||||||||| ||  ||| ||||||||| ||||||||||||||| ||||||| ||    
T  17238896 acttaaagcttcaaaggctgatcaatggatttaatctcgtctaagcattgcagaagaccagaagagtgaagcatcgactattttgaaaggatttgaaagc 17238995  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||| | ||| ||   || ||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  17238996 attggatgattgtt-ctttgaatagcgttgacaaagtacaattgtacgaagtgtacaaccactatctcc 17239063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 26 - 221
Target Start/End: Original strand, 46796324 - 46796508
Alignment:
Q  26 agaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagca 125  Q
    |||||||||||||||||| | |||||||||||| |||||||||| | ||||| |||||||| ||||||| |||||||||||| |||||||||||    ||    
T  46796324 agaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttaaaggattcaaactcgtct-aagattgcagaagactggaaaagtattaca 46796422  T
Q  126 acgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||| ||| ||||||||         ||||| ||| ||  ||| || ||| |||||||||| |||||||||| ||||||||||||||||||| ||||    
T  46796423 acggctaatttgaaag---------gcattagatacttattcttc-aaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctcc 46796508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 220
Target Start/End: Complemental strand, 52920639 - 52920425
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    |||||||||  || |||| ||||||||| ||||||||| | |||||||  ||||| | |||||| |||  | |||||||| || |||||||||  |||||    
T  52920639 atcagaagctgaagatcaccagaagctgaagttcatcaggagatgcaagacttaaagtttcaaaggctgctcaatggatttaatctcgtctaagcattgc 52920540  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| ||| ||| ||||||||||| |||| ||| |||| ||||||| ||||| |||||| ||| ||  ||| |||||||||||| ||   ||| ||||||    
T  52920539 agaagactagaagagtgaagcaacaactaattt-aaagtatttgaaggcatttgatgcttgtt-ctttaaagagcgttgacaaattaaaattgtacgaag 52920442  T
Q  204 tgtacaaccactacctc 220  Q
    | |||||||||||||||    
T  52920441 tatacaaccactacctc 52920425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 117 - 221
Target Start/End: Complemental strand, 20646275 - 20646172
Alignment:
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    |||||||||||| |||||||||||| ||||||| |||||||||||| ||| ||   || |||||||||| |||||  ||| |||||||||||||||||||    
T  20646275 agtgaagcaacgtctattttgaaaggatttgaaagcattggatgcttgtt-ctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccacta 20646177  T
Q  217 cctcc 221  Q
    |||||    
T  20646176 cctcc 20646172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 30054166 - 30054358
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| ||||| || |||||||||| | ||||||| | || |||||||||||| ||| | | |||||| |||| ||||| ||||||||| ||| ||||||    
T  30054166 aatcaccagaaacttcagttcatcaggagatgcaattcaaagcttcaaaagctgtttcaagaattcaaactcgcctaaa-attgcagaagacttgaaaag 30054264  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    |  ||||||||||| ||||||||         ||||||| ||||  |||  ||||| |||||||||| |||||||||| ||||| ||||||||||||| |    
T  30054265 tatagcaacgactactttgaaag---------gcattgggtgcttattcaacaaaagagcgttgacatagtacgtttgtacgaaatgtacaaccactaac 30054355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 221
Target Start/End: Complemental strand, 16032639 - 16032543
Alignment:
Q  124 caacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||| ||||||| |||||||||||| |||| |  || | || ||||||||||||  ||| ||||||||||||||||||||||||    
T  16032639 caacgactattttgaaaggatttgaaggcattggatgcttgttctttgaaga-gcattgacaaagtacaattgtacgaagtgtacaaccactacctcc 16032543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 21636620 - 21636807
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagt 119  Q
    |||| ||||||  ||||||||||| | | || ||||||| |||||||||||| ||| | ||| || | |||| ||| | ||||||||| |||||||||||    
T  21636620 atcaccagaagtggcagttcatcaggagttggaacttaaagcttcaaaagctgtttcaaggactctaactcgcctagaaattgcagaagactggaaaagt 21636719  T
Q  120 gaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
       ||||||||||||||||         || ||||||||||||  ||| || ||| |||||||||| |||||||||| ||||||||||||||||||||    
T  21636720 atggcaacgactattttga---------aatgcattggatgcttattcttc-aaagagcgttgacatagtacgtttgtacgaagtgtacaaccactac 21636807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 40851177 - 40850990
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagt 119  Q
    |||| |||||||| |||||||||| | |||| ||||||| ||||||||||||  || | ||| || | |||| ||| | ||||||||| |||||||||||    
T  40851177 atcaccagaagctacagttcatcaggagatggaacttaaagcttcaaaagctggttcaaggactctaactcgcctagaaattgcagaagactggaaaagt 40851078  T
Q  120 gaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
       ||||||||||||||||         || ||||||||||||  ||| || ||| |||||||||| |||| ||||| ||||||||||||||||||||    
T  40851077 atggcaacgactattttga---------aatgcattggatgcttattcttc-aaagagcgttgacatagtatgtttgtacgaagtgtacaaccactac 40850990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 117 - 221
Target Start/End: Original strand, 16658656 - 16658759
Alignment:
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||  || ||   || |||||||||| | |||  ||| |||||||||||||||||||    
T  16658656 agtgaagcaacgactattttgaaaggatttgaaagcattggatgcttatt-ctttgaagagcgttgacataatacaattgtacgaagtgtacaaccacta 16658754  T
Q  217 cctcc 221  Q
    |||||    
T  16658755 cctcc 16658759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 221
Target Start/End: Original strand, 25398295 - 25398396
Alignment:
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    ||||||||||||||||||||||| ||||||| |||||| ||  | | || || ||| ||||||||||||| ||  ||| |||||||||||||||||||||    
T  25398295 tgaagcaacgactattttgaaaggatttgaaggcattgcatatttgctcttc-aaagagcgttgacaaagcacaattgtacgaagtgtacaaccactacc 25398393  T
Q  219 tcc 221  Q
    |||    
T  25398394 tcc 25398396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 50300439 - 50300373
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaa 67  Q
    ||||||||| |||  |||||||| |||||||||||||||||||  ||||||||||||||||||||||    
T  50300439 agtttatcataagttaaaaatcaccagaagctgcagttcatcagaggatgcaacttaaggcttcaaa 50300373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 26 - 167
Target Start/End: Original strand, 19888889 - 19889033
Alignment:
Q  26 agaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaag-ctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaa 122  Q
    |||||||  ||||||||| | |||||||  ||||| |||| ||||| || || ||||||||||| |||||| ||  |||||| || ||  ||  ||||||    
T  19888889 agaagctaaagttcatcaagagatgcaagacttaaagcttaaaaagactgttcaatggattcaatctcgtccaagcattgcaaaagaccagatgagtgaa 19888988  T
Q  123 gcaacgactattttgaaagaatttgaacgcattggatgctagttc 167  Q
    ||||||||||||||||||| ||||||| |||||||||||| ||||    
T  19888989 gcaacgactattttgaaaggatttgaaagcattggatgcttgttc 19889033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 21605604 - 21605795
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagt 119  Q
    |||| |||||| |||||||||||| | |||| ||||||| |||||||||| | ||| | ||| || | |||| ||| | ||||||||| |||||||||||    
T  21605604 atcaccagaagttgcagttcatcaggagatggaacttaaagcttcaaaagttgtttcaaggactctaactcgcctagaaattgcagaagactggaaaagt 21605703  T
Q  120 gaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacct 219  Q
        |||||||||||||||         || ||||||||||||  ||| || ||| |||||||||| | |||||||| ||||||||||||||||||| ||    
T  21605704 atgacaacgactattttga---------aatgcattggatgcttattcttc-aaagagcgttgacataatacgtttgtacgaagtgtacaaccactatct 21605793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 29951412 - 29951579
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| | | || |||||||| || |||||||||  |||| |||| ||  ||  ||||||||||| ||||||||||||| ||||||| ||    
T  29951412 acttaaagcttcaaaggtttttcaatggatttaatctcgtctaagcattgtagaagaccagaggagtgaagcaacaactattttgaaaggatttgaaggc 29951511  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||| ||| ||   || || ||| |||||||||  ||| || |||||||||||||||| ||||    
T  29951512 attggatgcttgtt-ctttgaagagagttaacaaagtacaattgtacaaagtgtacaaccactatctcc 29951579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 30000566 - 30000733
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| | | || |||||||| || |||||||||  |||| |||| ||  ||  ||||||||||| ||||||||||||| ||||||| ||    
T  30000566 acttaaagcttcaaaggtttttcaatggatttaatctcgtctaagcattgtagaagaccagaggagtgaagcaacaactattttgaaaggatttgaaggc 30000665  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||| ||| ||   || || ||| |||||||||  ||| || |||||||||||||||| ||||    
T  30000666 attggatgcttgtt-ctttgaagagagttaacaaagtacaattgtacaaagtgtacaaccactatctcc 30000733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 11868332 - 11868287
Alignment:
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  11868332 agcgttgacaaagtacgattgtacgaagtgtacaaccactacctcc 11868287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 31303536 - 31303404
Alignment:
Q  88 ctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaa 187  Q
    |||||||||  ||||||||| |||| || ||||||| ||| ||||||||||||| |||||||  |||| |||| | ||| ||   || ||||||||||||    
T  31303536 ctcgtctaagcattgcagaagactgaaagagtgaaggaacaactattttgaaaggatttgaagacatttgatgtttgtt-ctttgaagagcgttgacaaa 31303438  T
Q  188 gtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||  ||| |||||||||||||| |||| ||||    
T  31303437 gtacaattgtacgaagtgtacaacaactatctcc 31303404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 33598084 - 33598020
Alignment:
Q  5 tatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaag 69  Q
    |||||||||| |||||||| || ||| || |||||||||  ||||||||||||||||||||||||    
T  33598084 tatcagaagctaaaaatcaccaaaagttgtagttcatcagaggatgcaacttaaggcttcaaaag 33598020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 11909079 - 11909165
Alignment:
Q  134 tttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||| ||||||| ||||||||||||  | | ||||| | ||||||||||||||||| |  ||||||||||| ||||||||||||    
T  11909079 tttgaaaggatttgaaggcattggatgcttatccttcaaaga-gcgttgacaaagtacgtctttacgaagtgtacgaccactacctcc 11909165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 45858804 - 45858875
Alignment:
Q  134 tttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgt 206  Q
    |||||||| ||||||| ||||||||||||  | | ||||| | ||||||||||||||||| || |||||||||    
T  45858804 tttgaaaggatttgaaggcattggatgcttatccttcaaaga-gcgttgacaaagtacgtctgtacgaagtgt 45858875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 156; Significance: 5e-83; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 12174264 - 12174482
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatgg-attcaacctcgtctaaaga 99  Q
    |||||||||||||| |||||||| |||||||||||||||||||  |||||||||||||| ||||||||||| ||| |||| |||||||||||||||| ||    
T  12174264 agtttatcagaagctaaaaatcaccagaagctgcagttcatcagaggatgcaacttaag-cttcaaaagctgttttatgggattcaacctcgtctaagga 12174362  T
Q  100 ttgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaac 199  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  12174363 ttgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgtac 12174462  T
Q  200 gaagtgtacaaccactacct 219  Q
    ||||||||||||||||||||    
T  12174463 gaagtgtacaaccactacct 12174482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 35952611 - 35952831
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatgg-attcaacctcgtctaaaga 99  Q
    |||||||||||||| |||||||| |||||| ||||||||||||  |||||||||||||||||||||||||| |||||||| |||||||||||||||| ||    
T  35952611 agtttatcagaagctaaaaatcaccagaagttgcagttcatcagaggatgcaacttaaggcttcaaaagctgtttaatgggattcaacctcgtctaagga 35952710  T
Q  100 ttgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaac 199  Q
    ||| |||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||| | |||| || ||| ||||||||||||||||||||| ||    
T  35952711 ttgaagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgtttgttcatc-aaagagcgttgacaaagtacgtttgtac 35952809  T
Q  200 gaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||||||||    
T  35952810 gaagtgtacaaccactacctcc 35952831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 21 - 221
Target Start/End: Complemental strand, 14426761 - 14426562
Alignment:
Q  21 tcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtg 120  Q
    |||||||||| |||||||||||| | |||||||||||| |||||| ||||| |||||||||||||| ||| |||||||||||||||| ||||||||||||    
T  14426761 tcatcagaaggtgcagttcatcaggagatgcaacttaaagcttcagaagctgtttaatggattcaaactcatctaaagattgcagaagactggaaaagtg 14426662  T
Q  121 aagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctc 220  Q
    ||||||||||||||||||||| ||||||| |||||||||||| |||| || ||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  14426661 aagcaacgactattttgaaaggatttgaaggcattggatgcttgttcttc-aaagagcgttgacaaagtacgtttgtactaagtgtacaaccactacctc 14426563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 16111808 - 16112027
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||| |||||  |||||||| |||||||||||||| ||||  ||||||||||||| |||||||||| | ||| |||||||||||||||||||||||     
T  16111808 agtttattagaagataaaaatcaccagaagctgcagttgatcagaggatgcaacttaaagcttcaaaagttgttttatggattcaacctcgtctaaagag 16111907  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| || | |||||||||||||||||| ||||| ||||| ||||| |||||||||||| |||| || ||| ||||||||||||||||  ||| |||    
T  16111908 tgcagaagacggaaaaagtgaagcaacgacttttttggaagaaattgaaggcattggatgcttgttcttc-aaagagcgttgacaaagtacaattgtacg 16112006  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||| ||||    
T  16112007 aagtgtacaaccactatctcc 16112027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 7 - 221
Target Start/End: Complemental strand, 4821701 - 4821489
Alignment:
Q  7 tcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcaga 106  Q
    ||||||||  ||||||| ||||||||||||||||||  | ||| |||||||| |||||||||||| |||||   |||||| |||||||||||||| ||||    
T  4821701 tcagaagctgaaaatcaccagaagctgcagttcatccggagatacaacttaaagcttcaaaagctgtttaacaaattcaaactcgtctaaagattacaga 4821602  T
Q  107 atactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgt 206  Q
    | ||| |||||||| ||||||| |||||||||||| ||||||| |||||||||||| |||| || ||| |||||||| |||||||||||| |||||||||    
T  4821601 agactagaaaagtggagcaacggctattttgaaag-atttgaaggcattggatgcttgttcttc-aaagagcgttgaaaaagtacgtttgtacgaagtgt 4821504  T
Q  207 acaaccactacctcc 221  Q
    |||||||||||||||    
T  4821503 acaaccactacctcc 4821489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 17 - 210
Target Start/End: Original strand, 16542960 - 16543152
Alignment:
Q  17 aaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaa 116  Q
    ||||||| || |||||||||||||||| | |||||||| ||| |||||||||||| |||||||||||||| ||||| ||| |||||||||| ||||||||    
T  16542960 aaaatcaccataagctgcagttcatcaggagatgcaacataatgcttcaaaagctgtttaatggattcaaactcgtttaatgattgcagaagactggaaa 16543059  T
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaa 210  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||| |||| || ||| |||  |||||||||||||||| |||| ||||||||    
T  16543060 agtgaagcaacgactattttgaaatgatttgaaggcattggatgcttgttcttc-aaagagctctgacaaagtacgtttgtacgatgtgtacaa 16543152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 17 - 210
Target Start/End: Complemental strand, 16622702 - 16622510
Alignment:
Q  17 aaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaa 116  Q
    ||||||| || |||||||||||||||| | |||||||| ||| |||||||||||| |||||||||||||| ||||| ||| |||||||||| ||||||||    
T  16622702 aaaatcaccataagctgcagttcatcaggagatgcaacataatgcttcaaaagctgtttaatggattcaaactcgtttaatgattgcagaagactggaaa 16622603  T
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaa 210  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||| |||| || ||| |||  |||||||||||||||| |||| ||||||||    
T  16622602 agtgaagcaacgactattttgaaatgatttgaaggcattggatgcttgttcttc-aaagagctctgacaaagtacgtttgtacgatgtgtacaa 16622510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 21 - 221
Target Start/End: Original strand, 30945300 - 30945499
Alignment:
Q  21 tcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtg 120  Q
    ||||||||||||||||||||||| | |||||||||||| |||||||| | | || || ||||| || |||||||||  |||| |||| | ||||||||||    
T  30945300 tcatcagaagctgcagttcatcaggagatgcaacttaaagcttcaaaggttgttcaacggatttaatctcgtctaagtattgtagaagattggaaaagtg 30945399  T
Q  121 aagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctc 220  Q
    ||||||| ||||||||||||| ||||||| |||||||||||| ||||||| ||| ||||||||||||||||  ||| |||||||||||||||||||||||    
T  30945400 aagcaacaactattttgaaaggatttgaaggcattggatgcttgttcctc-aaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctc 30945498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 28622280 - 28622498
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||| |||| |||| |||||||| ||||||||||||||||||| | |||||||||||| |||||||||| | || ||||||||||| |||||||||  ||    
T  28622280 agttcatcataagctaaaaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgttcaatggattcaatctcgtctaagcat 28622379  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||||||| |||||||||||||||| ||| |||||||| ||||||| |||||||||| | |||  || |||  |||||||||||||||  ||| |||    
T  28622380 tgcagaatactagaaaagtgaagcaacggctaatttgaaaggatttgaaggcattggatgtttgtttttc-aaagggcgttgacaaagtacaattgtacg 28622478  T
Q  201 aagtgtacaaccactacctc 220  Q
    | ||||||||||||||||||    
T  28622479 aggtgtacaaccactacctc 28622498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 219
Target Start/End: Complemental strand, 33605915 - 33605702
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaag-ctatttaatggattcaacctcgtctaaagattgca 104  Q
    |||||||||  ||||||| ||||||||||||||||||| | |||||||| ||| |||||||||| || || || ||||| || |||||||||  | ||||    
T  33605915 atcagaagctgaaaatcaccagaagctgcagttcatcaggagatgcaacataaagcttcaaaaggcttttcaacggatttaatctcgtctaagcaatgca 33605816  T
Q  105 gaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagt 204  Q
    ||  ||||||||| |||||||| |||||||||||||| ||||||| |||||||||||| |||| || ||| ||||||||||||||||| ||| |||||||    
T  33605815 gatgactggaaaattgaagcaatgactattttgaaaggatttgaaggcattggatgcttgttcttc-aaagagcgttgacaaagtacgattgtacgaagt 33605717  T
Q  205 gtacaaccactacct 219  Q
    |||||||||||||||    
T  33605716 gtacaaccactacct 33605702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 221
Target Start/End: Original strand, 30944267 - 30944466
Alignment:
Q  21 tcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtg 120  Q
    ||||||||||||||||||||||| | |||||||||||| |||||||| | | || || ||||| || |||||||||  ||||||||| | ||||||||||    
T  30944267 tcatcagaagctgcagttcatcaggagatgcaacttaaagcttcaaaggttgttcaacggatttaatctcgtctaagtattgcagaagattggaaaagtg 30944366  T
Q  121 aagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctc 220  Q
    ||||||| ||||||||||||| ||||||| ||||||||||||  ||| || ||| |||||||||||| |||  ||| |||||||||||||||||||||||    
T  30944367 aagcaacaactattttgaaaggatttgaaggcattggatgcttattcttc-aaagagcgttgacaaaatacaattgtacgaagtgtacaaccactacctc 30944465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 48236826 - 48237045
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||| |||||||||  ||||||| ||||||||||||||||||| | |||||||||||| |||||||||| | || ||||||||||| |||||||||  ||    
T  48236826 agttcatcagaagctgaaaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgttcaatggattcaatctcgtctaagcat 48236925  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    |||| || |||| ||| ||||||||||||| | |||||||| ||||||| ||||  ||||||  ||| || ||| ||||||||||||||||  ||| |||    
T  48236926 tgcataagactgaaaaggtgaagcaacgacaagtttgaaaggatttgaaggcatcagatgcttattcttc-aaagagcgttgacaaagtacaattgtacg 48237024  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  48237025 aagtgtacaaccactacctcc 48237045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 6 - 221
Target Start/End: Original strand, 2265448 - 2265662
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcag 105  Q
    |||||||||  | ||||| |||||| || ||||||||| | |||||||||||| |||| ||||||| |||||  ||||||| ||||||||||||||||||    
T  2265448 atcagaagctgagaatcaccagaagttgtagttcatcaggagatgcaacttaaagctttaaaagctgtttaacagattcaaactcgtctaaagattgcag 2265547  T
Q  106 aatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtg 205  Q
    || |||| ||||||  ||||||| |||||||| ||| ||||||| | |||  |||||  ||| || ||| |||||||||| |||||||||| ||||||||    
T  2265548 aagactgaaaaagtatagcaacggctattttggaaggatttgaaggtatttaatgcttattcttc-aaagagcgttgacatagtacgtttgtacgaagtg 2265646  T
Q  206 tacaaccactacctcc 221  Q
    ||||||||||||||||    
T  2265647 tacaaccactacctcc 2265662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 217
Target Start/End: Original strand, 9709731 - 9709941
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcag 105  Q
    |||||||||  ||||||| ||||||||||||||||||| | |||||||| ||| ||||||||  || || |||||||| || |||||||||  |||||||    
T  9709731 atcagaagctgaaaatcaccagaagctgcagttcatcaggagatgcaacataaagcttcaaagcctgttcaatggatttaatctcgtctaagcattgcag 9709830  T
Q  106 aatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtg 205  Q
    || ||||||| |||||||||||| ||| |||||||| ||||||| ||||| |||||| |||| || ||| |||||||||| |||||   || ||||||||    
T  9709831 aagactggaagagtgaagcaacgcctagtttgaaaggatttgaaggcattagatgcttgttcttc-aaagagcgttgacatagtacaactgtacgaagtg 9709929  T
Q  206 tacaaccactac 217  Q
    || |||||||||    
T  9709930 taaaaccactac 9709941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 15704447 - 15704617
Alignment:
Q  25 cagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagc 124  Q
    |||||| || |||||||||   |||| ||||||| |||||||||||| ||||| |||||||| |||||||||||||||||||| |||||||||||  |||    
T  15704447 cagaagttgtagttcatcagaagatgaaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagattgcagaagactggaaaagtatagc 15704546  T
Q  125 aacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttg 196  Q
    ||||||||||||| ||| ||||||| ||||||||||||  ||| || ||| |||||||||| ||||||||||    
T  15704547 aacgactattttggaaggatttgaaggcattggatgcttattcttc-aaagagcgttgacatagtacgtttg 15704617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 221
Target Start/End: Original strand, 33691650 - 33691855
Alignment:
Q  17 aaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactgga 114  Q
    ||||||| ||||||||  ||||||||| | |||||||  | ||| |||||||| ||| || |||||||| || |||||||||  ||||||||| ||||||    
T  33691650 aaaatcaccagaagctctagttcatcaggagatgcaagacataaagcttcaaaggctgttaaatggatttaatctcgtctaagcattgcagaagactgga 33691749  T
Q  115 aaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccac 214  Q
    | |||||||||||||||||||||||||||||| || || || |||||| |||| || ||| ||||||||||||||||  ||| |||||||||| ||||||    
T  33691750 agagtgaagcaacgactattttgaaagaatttaaaggcgttagatgcttgttcttc-aaagagcgttgacaaagtacaattgtacgaagtgtataaccac 33691848  T
Q  215 tacctcc 221  Q
    |||||||    
T  33691849 tacctcc 33691855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 44467301 - 44467079
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctattt-aatggattcaacctcgtctaaa 97  Q
    |||| |||||||||  || |||| || |||||| ||||||||| | |||||||  ||||| |||||||||| |  || |||||||| || |||||||||     
T  44467301 agttcatcagaagctgaagatcaccaaaagctgaagttcatcaggagatgcaagacttaaagcttcaaaaggttgttcaatggatttaatctcgtctaag 44467202  T
Q  98 gattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttga 197  Q
     ||||||||| ||| ||| ||||||||||||||||||||||||| ||||||| |||||||||||| ||| ||  ||| || |||||||||||||  |||     
T  44467201 cattgcagaagactagaagagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgtt-ctttaaagagtgttgacaaagtacaattgt 44467103  T
Q  198 acgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||||||||||    
T  44467102 acgaagtgtacaaccactacctcc 44467079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 221
Target Start/End: Complemental strand, 28409251 - 28409054
Alignment:
Q  25 cagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaa 122  Q
    ||||||||  ||||||||| | |||||||  | |||||||||||| | | || |||||||| || |||||||||| ||||||||| ||| ||| ||||||    
T  28409251 cagaagctaaagttcatcaagagatgcaagacataaggcttcaaaggttgttcaatggatttaatctcgtctaaacattgcagaagactagaagagtgaa 28409152  T
Q  123 gcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||| | ||||||||||| ||||||| |||||||||| | |||| || ||| ||||||||||||||||  ||| ||||||||||||||||||||||||    
T  28409151 gcaacaattattttgaaaggatttgaaggcattggatgtttgttcttc-aaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctcc 28409054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 17 - 221
Target Start/End: Original strand, 23279897 - 23280101
Alignment:
Q  17 aaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactgga 114  Q
    ||||||| |||||| || ||||||||| | |||||||  ||||| |||||||| |||||| | |||||| || || ||||||  |||| |||| ||||||    
T  23279897 aaaatcaccagaagttgtagttcatcaggagatgcaagacttaaagcttcaaaggctattca-tggatttaatcttgtctaagcattgtagaagactgga 23279995  T
Q  115 aaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccac 214  Q
    |||||| ||||||| ||| |||||||| ||||||| |||||||||||| |||| || ||| ||||||||||||||||  ||| |||||||||||||||||    
T  23279996 aaagtggagcaacggctagtttgaaaggatttgaaggcattggatgcttgttcttc-aaagagcgttgacaaagtacaattgtacgaagtgtacaaccac 23280094  T
Q  215 tacctcc 221  Q
    || ||||    
T  23280095 tatctcc 23280101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 221
Target Start/End: Original strand, 10883100 - 10883316
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    |||||||||  || |||| ||||||||| ||||||||| | |||||||  ||||| | |||||| | | || |||||||| || |||||||||  ||| |    
T  10883100 atcagaagctgaagatcaccagaagctgtagttcatcaggagatgcaagacttaaagtttcaaaggttgttcaatggatttaatctcgtctaatcatttc 10883199  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| ||||||| ||||||||||||||||||||||||| ||||||| |||||||||||  ||| ||   || ||||||||||||||||  ||| ||||||    
T  10883200 agaagactggaagagtgaagcaacgactattttgaaaggatttgaaggcattggatgcctgtt-ctttgaagagcgttgacaaagtacaattgtacgaag 10883298  T
Q  204 tgtacaaccactacctcc 221  Q
    ||||||| ||||||||||    
T  10883299 tgtacaatcactacctcc 10883316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 21283349 - 21283516
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| | | || |||||||| || |||||||||  ||||||||| ||||||| ||| |||||||| | |||||||||| ||||||| ||    
T  21283349 acttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtaaagcaacgtccattttgaaaggatttgaaggc 21283448  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||| |||  || ||| ||||||||||||||||  ||| ||||||||||||||||||||||||    
T  21283449 attggatgcttgttattc-aaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctcc 21283516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 22577962 - 22578164
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| ||||||||| ||||||||| | |||||||  ||||| |||||||| | | || ||| |||| || ||||| |||  ||||||||| |||| || |    
T  22577962 atcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaagggtgttcaatagatttaatctcgtttaagcattgcagaagactgtaaga 22578061  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    |||||||||| ||||||||||||| ||||||| |||||| ||| | ||| || |||| ||||||||||||||||  ||| ||||||||||||||||||||    
T  22578062 gtgaagcaacaactattttgaaaggatttgaaggcattgaatgattgtt-cttaaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactac 22578160  T
Q  218 ctcc 221  Q
    ||||    
T  22578161 ctcc 22578164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 9069798 - 9069577
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaag 98  Q
    |||| |||||||||  ||||||| ||||||||  | ||||||| | |||||||  ||||| |||||||| | | || || ||||| ||  ||||||||      
T  9069798 agttcatcagaagctgaaaatcaccagaagctctatttcatcaggagatgcaaaacttaaagcttcaaaggttgttcaagggatttaatatcgtctaagc 9069699  T
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| |||| || |||||| ||||| |||| || ||  ||| ||||||||||||  ||| |    
T  9069698 attgcagaagactggaagagtgaagcaacgactattttgaaaggatttaaaggcattgtatgcttgttcttc-aaggagcattgacaaagtacaattgta 9069600  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||||    
T  9069599 cgaagtgtacaaccactacctcc 9069577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 21695637 - 21695417
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaag 98  Q
    |||| |||||||||  || |||| ||||||||| ||||||||| | |||||||  ||||| |||||||||| | || |||||||| || |||||||||      
T  21695637 agttcatcagaagctgaagatcaccagaagctgaagttcatcaagagatgcaagacttaaagcttcaaaagttgttcaatggatttaatctcgtctaagc 21695538  T
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||  ||| |||||||||||||||||||  |||  ||||||| |||||||||||| ||| ||   || ||||||||||||||||  ||| |    
T  21695537 attgcagaagaccagaagagtgaagcaacgactatttcaaaatgatttgaaggcattggatgcttgtt-ctttgaagagcgttgacaaagtacaattgta 21695439  T
Q  199 cgaagtgtacaaccactacctc 220  Q
    ||||||||||||||| ||||||    
T  21695438 cgaagtgtacaaccagtacctc 21695417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 60 - 221
Target Start/End: Complemental strand, 15088695 - 15088535
Alignment:
Q  60 gcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggat 159  Q
    |||||||| ||| || |||||||| || |||||||||  ||||||||| |||| || ||||||||||||||||||||||||| |||||||  ||||||||    
T  15088695 gcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactgaaagagtgaagcaacgactattttgaaaggatttgaagacattggat 15088596  T
Q  160 gctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||| ||| ||   || ||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  15088595 gcttgtt-cttttaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctcc 15088535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 2913549 - 2913751
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| ||||| ||| ||||||||| | |||||||  |||||  ||||||| ||| || |||| ||| || ||| |||||| | ||||||| ||| |||||    
T  2913549 atcaccagaaactgtagttcatcaggagatgcaagacttaaatcttcaaaggctgttcaatgaatttaatctcatctaaacaatgcagaagactagaaaa 2913648  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    ||| |||||||||||||||||||| ||||||| |||||||||||| ||| ||   || ||||||||||||||||  ||| |||||||||||||||||||     
T  2913649 gtggagcaacgactattttgaaaggatttgaaggcattggatgcttgtt-ctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactat 2913747  T
Q  218 ctcc 221  Q
    ||||    
T  2913748 ctcc 2913751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 21692504 - 21692302
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||||||||||||| ||||||| | | |||||||  ||||| |||||||||| |||| ||||  || || ||| |||||  ||||||||| ||  ||| |    
T  21692504 atcatcagaagctgaagttcattaggagatgcaagacttaaagcttcaaaagttattcaatgattttaatctcttctaagcattgcagaagaccagaaga 21692405  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    |||||||||||||| ||||||||| ||||||| |||||||||||| ||| ||   || ||||||||||||||||  ||| | ||||||||||||||||||    
T  21692404 gtgaagcaacgactgttttgaaaggatttgaaggcattggatgcttgtt-ctttgaagagcgttgacaaagtacaattgtatgaagtgtacaaccactac 21692306  T
Q  218 ctcc 221  Q
    ||||    
T  21692305 ctcc 21692302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 19339202 - 19339393
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagt 119  Q
    |||| ||||||||||||||||||| | |||  ||||||| | ||||||| || ||| | ||| || | |||| ||||||||||||||| |||||||||||    
T  19339202 atcaccagaagctgcagttcatcaggagattgaacttaaagtttcaaaacctgtttcaaggactctaactcgcctaaagattgcagaagactggaaaagt 19339301  T
Q  120 gaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacct 219  Q
    |  ||||||||||||||||         || ||||||||||||  ||| || ||| |||||||||| |||||||||| ||||||||||||||||||||||    
T  19339302 gtggcaacgactattttga---------aatgcattggatgcttattcttc-aaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacct 19339391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 13137871 - 13138038
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| | || | |||||||| || |||||||||  ||||||||| |||| || ||||||||||| ||||||||||||  ||||||| ||    
T  13137871 acttaaagcttcaaaggttaatcaatggatttaatctcgtctaagcattgcagaagactgaaagagtgaagcaacaactattttgaaaagatttgaaggc 13137970  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||| ||| ||   || ||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  13137971 attggatgcttgtt-ctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctcc 13138038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 331880 - 331660
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgca-acttaaggcttcaaaagctatttaatggattcaacctcgtctaaaga 99  Q
    |||| |||||||||  || |||| ||||||||| ||| ||||| | |||||  |||||| |||||||| | | ||| ||||||||||  ||||| ||  |    
T  331880 agttcatcagaagctgaagatcaccagaagctgaagtccatcaggagatgcggacttaaagcttcaaaggttgttttatggattcaaggtcgtccaagca 331781  T
Q  100 ttgcagaatactggaaaagtgaagcaacgactatttt-gaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    |||||||| ||||||| |||||||||||  ||||||| ||||| || |||| ||||||||||||  || |||||||  |||||||||||||||   || |    
T  331780 ttgcagaagactggaagagtgaagcaacagctatttttgaaaggatctgaaggcattggatgcttattgctcaaaa--gcgttgacaaagtacaaatgta 331683  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||||    
T  331682 cgaagtgtacaaccactacctcc 331660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 25 - 221
Target Start/End: Complemental strand, 15468128 - 15467931
Alignment:
Q  25 cagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaa 122  Q
    ||||||||  ||||||||| | |||||||  ||||| |||||||| | | || ||| |||| || ||||||||   | ||||||| ||||||| ||||||    
T  15468128 cagaagctctagttcatcaggagatgcaagacttaaagcttcaaagggtgttcaatagatttaatctcgtctaggcaatgcagaagactggaagagtgaa 15468029  T
Q  123 gcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
     ||||||||||||| |||| ||||||| |||||||||||| |||| || ||| ||||||||||||||||  ||| |||| ||||||||||| |||||||    
T  15468028 tcaacgactattttaaaaggatttgaaggcattggatgcttgttcttc-aaagagcgttgacaaagtacaattgtacgaggtgtacaaccattacctcc 15467931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 32264669 - 32264861
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagt 119  Q
    |||| ||||||||||||||||||| | ||||| |||||| |||||||||| ||||| | |||||||| |||| ||| | ||||||||| |||||||||||    
T  32264669 atcaccagaagctgcagttcatcaggagatgcgacttaaagcttcaaaagttatttcaaggattcaaactcgcctagaaattgcagaagactggaaaagt 32264768  T
Q  120 gaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacct 219  Q
       |||||| |||||||||         || |||||||||| |  ||| ||||| ||||||||||| |||||||||| ||  |||||||||||| |||||    
T  32264769 atggcaacggctattttga---------aatgcattggatgtttattcttcaaagaagcgttgacatagtacgtttgtacagagtgtacaaccagtacct 32264859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 24788358 - 24788156
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| ||||||||| ||||||| | | |||||||  ||||| |||||||| | | || ||| |||| ||  || |||||  ||||||||| ||| ||| |    
T  24788358 atcaccagaagctgaagttcattaggagatgcaagacttaaagcttcaaaggttgttcaatagatttaatatcatctaagcattgcagaagactagaaga 24788259  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    |||||||||||| ||||||||||| ||||||| ||||||| |||| |||| || ||| ||  ||||||||||||  ||| ||||||||||||||||||||    
T  24788258 gtgaagcaacgaatattttgaaaggatttgaaggcattgggtgcttgttcttc-aaagagaattgacaaagtacaattgtacgaagtgtacaaccactac 24788160  T
Q  218 ctcc 221  Q
    ||||    
T  24788159 ctcc 24788156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 13303027 - 13302830
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| ||||||||| ||||||| | | |||||||  ||||| |||||||| | | || |||||||| ||  ||||||||  |||| |||| ||| ||| |    
T  13303027 atcaccagaagctgtagttcattaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatatcgtctaagcattgtagaagactagaaga 13302928  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||| ||| ||   || ||||||||||||||||  ||| || ||||||||||||||||    
T  13302927 gtgaagcaacgactattttgaaaggatttgaaggcattagatgcttgtt-ctttgaagagcgttgacaaagtacaattgtacaaagtgtacaaccacta 13302830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 109 - 220
Target Start/End: Complemental strand, 14193240 - 14193130
Alignment:
Q  109 actggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtac 208  Q
    ||||||| ||||||||||||||||||||||||| ||||||| |||||| ||||| |||| || ||| |||||| |||||||||   || |||||||||||    
T  14193240 actggaagagtgaagcaacgactattttgaaaggatttgaaggcattgaatgcttgttcttc-aaagagcgttaacaaagtacaagtgtacgaagtgtac 14193142  T
Q  209 aaccactacctc 220  Q
    ||||||||||||    
T  14193141 aaccactacctc 14193130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 53 - 215
Target Start/End: Complemental strand, 2500220 - 2500059
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| | | || |||||||| || |||||||||  ||||||||| ||||||| ||||||||||| ||||||||||||| ||||||| ||    
T  2500220 acttaaagcttcaaatgttgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacaactattttgaaaggatttgaaagc 2500121  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccact 215  Q
    ||||||||||   ||||   || || |||||||||||||  ||| || |||||||||||||||    
T  2500120 attggatgct-tatcctttgaagagagttgacaaagtacaattgtacaaagtgtacaaccact 2500059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 8183145 - 8182945
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| ||||||||||||||||||| | ||||||||| || |||| ||||| | | |||  | ||||| ||||||||| |||||||||| ||||||||||    
T  8183145 aatcaccagaagctgcagttcatcaggagatgcaactcaaagcttaaaaagttgtataaaagtttcaaactcgtctaa-gattgcagaagactggaaaag 8183047  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    |  |||||| ||||||||||||| |||  ||  || | ||||||  ||| || ||| |||||||||| | ||||| || ||||||||||||||||||| |    
T  8183046 tatagcaacaactattttgaaaggattgaaagacacttgatgcttattcttc-aaagagcgttgacataatacgtctgtacgaagtgtacaaccactatc 8182948  T
Q  219 tcc 221  Q
    |||    
T  8182947 tcc 8182945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 11793138 - 11792922
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    ||||||||| ||| |||| ||||||||| ||||||||| | |||||||  ||||| |||| ||| | | || |||||| | || |||||||||  |||||    
T  11793138 atcagaagctaaagatcaccagaagctgaagttcatcaggagatgcaagacttaaagctttaaaggttgttcaatggacttaatctcgtctaagcattgc 11793039  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
      || ||   || ||||||||||||||||||||||||| ||||||| ||||| |||||| ||| ||   || ||||||||||||||||  ||| ||||||    
T  11793038 gaaagaccataagagtgaagcaacgactattttgaaagcatttgaaagcatttgatgcttgtt-ctttgaagagcgttgacaaagtacaattgtacgaag 11792940  T
Q  204 tgtacaaccactacctcc 221  Q
    ||||||||||||| ||||    
T  11792939 tgtacaaccactatctcc 11792922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 27871926 - 27871733
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| ||||||||||||||||||| |  ||||||||||| |||||||||| | ||| | ||||||||  ||  ||| | |||||||||  |||||| ||    
T  27871926 aatcaccagaagctgcagttcatcaggaaatgcaacttaaagcttcaaaagttgtttcaaggattcaaattcacctagaaattgcagaagtctggaatag 27871827  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    |   |||||| |||||||||||          ||||||||||||  ||| ||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  27871826 tatggcaacggctattttgaaat---------gcattggatgcttattcttcaaagaagcgttgacatagtacgtttgtacgaagtgtacaaccactacc 27871736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 29935380 - 29935501
Alignment:
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||  ||| ||||||||||||||||||||||||| ||||||| |||||||||||| ||| ||  ||| |||||||||| |||||  ||| |    
T  29935380 attgcagaagaccagaagagtgaagcaacgactattttgaaaggatttgaaagcattggatgcttgtt-ctttaaagagcgttgacatagtacaattgta 29935478  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||| ||||    
T  29935479 cgaagtgtacaaccactatctcc 29935501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 221
Target Start/End: Complemental strand, 13880279 - 13880119
Alignment:
Q  60 gcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggat 159  Q
    |||||||| ||| || |||||| | || |||||||||  ||||||||| ||| ||  ||||||||||||||||||||||||| ||||||| ||||| |||    
T  13880279 gcttcaaaggctgttcaatggacttaatctcgtctaagcattgcagaagactcgacgagtgaagcaacgactattttgaaaggatttgaaggcattagat 13880180  T
Q  160 gctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||  || ||   || ||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  13880179 gcttatt-ctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctcc 13880119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 48062772 - 48062963
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagt 119  Q
    |||| ||||||||||||||||||| | |||||||||||| |||||||||| | ||| | | |||||| |||| ||| | ||||  ||| |||||||||||    
T  48062772 atcaccagaagctgcagttcatcaagagatgcaacttaaagcttcaaaagttgtttcaagaattcaaactcgcctagaaattgtcgaagactggaaaagt 48062871  T
Q  120 gaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacct 219  Q
       |||||||||||||||||||         ||||||||||||  ||| || ||| |||||||||| |||||||||| |||||| |||||||||||| ||    
T  48062872 atggcaacgactattttgaaag---------gcattggatgcttattcttc-aaagagcgttgacatagtacgtttgtacgaagcgtacaaccactatct 48062961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 221
Target Start/End: Original strand, 12366694 - 12366891
Alignment:
Q  25 cagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaa 122  Q
    ||||||||| ||||||||| | | |||||  ||||| |||||||  ||| || |||||||| || ||||| |||  ||||||||| ||||| | ||||||    
T  12366694 cagaagctgaagttcatcaggaggtgcaaaacttaaagcttcaagggctgttcaatggatttaatctcgtttaagcattgcagaagactgggagagtgaa 12366793  T
Q  123 gcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||| ||||||||||||| ||||||| ||||||||||   ||| ||   || |||||||||| |||||  ||| ||||||| ||||||||||||||||    
T  12366794 gcaacaactattttgaaaggatttgaaagcattggatgtctgtt-ctttgaagagcgttgacatagtacaattgtacgaagtatacaaccactacctcc 12366891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 19237065 - 19237186
Alignment:
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||  ||| |||||||||||| ||| |||||||| ||||||| |||||||||||| |||| || ||| |||||||||||| |||  ||  |    
T  19237065 attgcagaagaccagaagagtgaagcaacggctactttgaaaggatttgaaggcattggatgcttgttcttc-aaagagcgttgacaaactacaattata 19237163  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||||    
T  19237164 cgaagtgtacaaccactacctcc 19237186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 13648911 - 13648744
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||||| | || |||||||| || | |||||||  ||||||||| |||| || |||||||||||| |||||||||||| |||| ||  |    
T  13648911 acttaaagcttcaaaagatgttcaatggatttaatcgcgtctaagcattgcagaagactgaaagagtgaagcaacggctattttgaaaggatttaaagac 13648812  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||| | | ||   || |||||||||| |||||  ||| ||||||||||||||||||| ||||    
T  13648811 attggatgcttgat-ctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctcc 13648744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 16316498 - 16316700
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| |||||| || ||||||||| |||||||||  ||||| |||||||| | | || |||||||| || | |||||||  ||||||||| ||  ||| |    
T  16316498 atcaccagaagttgaagttcatcaggggatgcaagacttaaagcttcaaaggttgttcaatggatttaatcacgtctaagaattgcagaagaccagaaga 16316597  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    ||||||||||  |||||||||||| |||||||  ||||||||||| ||| ||   || |||||||| | |||||  ||| |||||||||||||||||||     
T  16316598 gtgaagcaacagctattttgaaaggatttgaagccattggatgcttgtt-ctttgaagagcgttgaaatagtacaattgtacgaagtgtacaaccactat 16316696  T
Q  218 ctcc 221  Q
    ||||    
T  16316697 ctcc 16316700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 20 - 216
Target Start/End: Original strand, 19710954 - 19711151
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaa-agctatttaatggattcaacctcgtctaaagattgcagaatactg--gaaa 116  Q
    |||| ||||| ||| |||||||||   |||||||| ||| | |||||| |||| |||||||||||||| ||||||||||||  |   || ||||  ||||    
T  19710954 atcaccagaaactgtagttcatcagaagatgcaacctaaagtttcaaatagctgtttaatggattcaaactcgtctaaagagagtgaaagactgaagaaa 19711053  T
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    || |  |||||||||| |||||||| ||||||| ||||||||||||  | | ||||| | || ||||||||||||||||| |||||||||||||||||||    
T  19711054 ag-gtggcaacgactaatttgaaaggatttgaaggcattggatgcttatccttcaaaga-gcattgacaaagtacgtttgtacgaagtgtacaaccacta 19711151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 13730652 - 13730810
Alignment:
Q  54 cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgca 153  Q
    ||||| |||||||| | | || |||||||| || |||||||||  |||||| || |||  || |||||||||||| |||||||||||  ||||||| |||    
T  13730652 cttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcataagactaaaagagtgaagcaacggctattttgaaaagatttgaatgca 13730751  T
Q  154 ttggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaacca 213  Q
    ||||||||| ||| ||   || ||||||||||||||||  ||| ||||||||||||||||    
T  13730752 ttggatgcttgtt-ctttgaagagcgttgacaaagtacaattgtacgaagtgtacaacca 13730810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 24794788 - 24794854
Alignment:
Q  151 gcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    ||||||||||||  ||||||||| ||||||||||| |||||||||| ||||||||||||||||||||    
T  24794788 gcattggatgcttattcctcaaagaagcgttgacatagtacgtttgtacgaagtgtacaaccactac 24794854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 221
Target Start/End: Original strand, 5000861 - 5000965
Alignment:
Q  116 aagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccact 215  Q
    |||||||||||||||||||||||||| ||||||| |||||| ||||| |||| |  || || |||||||| |||||  ||| ||||||||||||||||||    
T  5000861 aagtgaagcaacgactattttgaaaggatttgaaagcattgaatgcttgttctttgaagaa-cgttgacatagtacaattgtacgaagtgtacaaccact 5000959  T
Q  216 acctcc 221  Q
    | ||||    
T  5000960 atctcc 5000965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 30026141 - 30025928
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaag 98  Q
    |||| |||||||||  || |||| ||||||||  ||||||||| | |||||||  ||||| |||||||| |||  | |||||||| |  ||||| |||      
T  30026141 agttcatcagaagctgaagatcaccagaagctctagttcatcaagagatgcaagacttaaagcttcaaacgctggtcaatggatttagtctcgtataagc 30026042  T
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    || |||||| |||| || |||||||||||| |||||||||||  | ||||| ||||| |||||| ||| ||   || ||||||||||||||||  ||| |    
T  30026041 atcgcagaagactgaaagagtgaagcaacggctattttgaaaagaattgaaggcattcgatgcttgtt-cttttaagagcgttgacaaagtacaattgta 30025943  T
Q  199 cgaagtgtacaacca 213  Q
    |||||||||||||||    
T  30025942 cgaagtgtacaacca 30025928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 11319636 - 11319420
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    |||||||||  || |||| |||||| || || |||||| | |||||||  ||| | |||||||| | | || |||||||| || || ||||||  |||||    
T  11319636 atcagaagctgaagatcaccagaagttgtaggtcatcaagagatgcaagacttcaagcttcaaaggatgttcaatggatttaatcttgtctaagcattgc 11319537  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| |||| || ||||||| ||| ||||||||||||| ||||||| |||||||||||  |||  |   || |||||||||||| |||  ||| ||||||    
T  11319536 agaagactgaaagagtgaagtaacaactattttgaaaggatttgaatgcattggatgcgtgtt-ttttgaagagcgttgacaaattacaattgcacgaag 11319438  T
Q  204 tgtacaaccactacctcc 221  Q
    ||||||||||||| ||||    
T  11319437 tgtacaaccactatctcc 11319420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 221
Target Start/End: Complemental strand, 14425647 - 14425462
Alignment:
Q  25 cagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagc 124  Q
    ||||||||  ||||||||| | |||||||||||| |||||||||| | ||| | |||||||| |||| || || ||||||||| |||||| ||||   ||    
T  14425647 cagaagctanagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggattcaaactcgcct-aacattgcagaagactgganaagtatggc 14425549  T
Q  125 aacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||| |||||||||         || ||||||||||||  ||| || ||| |||||||||| | |||||||| ||||||||||||||||||| ||||    
T  14425548 aacggctattttga---------aatgcattggatgcttattcttc-aaagagcgttgacatattacgtttgtacgaagtgtacaaccactatctcc 14425462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 7339822 - 7339898
Alignment:
Q  25 cagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagatt 101  Q
    ||||||||||||||||||| | |||||||||||| |||||||||  | ||||||||||| || ||||||||| ||||    
T  7339822 cagaagctgcagttcatcaggagatgcaacttaaagcttcaaaaattgtttaatggatttaaactcgtctaatgatt 7339898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 195
Target Start/End: Original strand, 16556664 - 16556755
Alignment:
Q  103 cagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgttt 195  Q
    ||||| |||||||||||||||||||| |||||||||||| |||| || ||||||  |||| |||| || ||| |||||||| |||||||||||    
T  16556664 cagaagactggaaaagtgaagcaacggctattttgaaaggattttaaggcattgattgcttgttcttc-aaagagcgttgaaaaagtacgttt 16556755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 195
Target Start/End: Complemental strand, 16608998 - 16608907
Alignment:
Q  103 cagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgttt 195  Q
    ||||| |||||||||||||||||||| |||||||||||| |||| || ||||||  |||| |||| || ||| |||||||| |||||||||||    
T  16608998 cagaagactggaaaagtgaagcaacggctattttgaaaggattttaaggcattgattgcttgttcttc-aaagagcgttgaaaaagtacgttt 16608907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 21381380 - 21381500
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagt 119  Q
    |||| ||||||||||||||||||| | |||  ||||||  | |||||||| | ||| | ||| || | |||| ||||||||||||||| |||||||||||    
T  21381380 atcaccagaagctgcagttcatcaggagattgaacttatagtttcaaaagttgtttcaaggactctaactcgcctaaagattgcagaagactggaaaagt 21381479  T
Q  120 gaagcaacgactattttgaaa 140  Q
    |  |||||| |||||||||||    
T  21381480 gtggcaacggctattttgaaa 21381500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 221
Target Start/End: Complemental strand, 1293176 - 1293045
Alignment:
Q  79 ggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagc 178  Q
    |||||||| |||| ||||| |||||| || |||||||||||  |||||| |||||||||||||         ||||||||||||  ||| ||||| | ||    
T  1293176 ggattcaaactcgactaaa-attgcaaaagactggaaaagtatagcaacaactattttgaaag---------gcattggatgcttattcttcaaaga-gc 1293088  T
Q  179 gttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||    
T  1293087 gttgacatagtacgtttgtacgaagtgtacaaccactatctcc 1293045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 13018527 - 13018648
Alignment:
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||| | | |||||||||||||||||||| || ||| ||||| |||||||||||| | |  |   || ||||||||||||||||  ||| |    
T  13018527 attgcagaagactaggagagtgaagcaacgactattttaaatgaagttgaaggcattggatgctggat-ttttgaagagcgttgacaaagtacaattgta 13018625  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||| ||||    
T  13018626 cgaagtgtacaaccactatctcc 13018648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 142
Target Start/End: Complemental strand, 13692524 - 13692435
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaaga 142  Q
    |||||| |||||||| | | || |||||||| || ||||| |||  ||||||||| ||||||| ||||||||||| ||||||||||||||    
T  13692524 acttaaagcttcaaaggttgttcaatggatttaatctcgtataagcattgcagaagactggaagagtgaagcaacaactattttgaaaga 13692435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 221
Target Start/End: Original strand, 39284604 - 39284707
Alignment:
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    |||||| ||||||||| ||  || ||||||||| |||||||||| | |||| |  || | |||||||||||||||  ||| |||||||||||||||||||    
T  39284604 agtgaaacaacgactaattcaaatgaatttgaaggcattggatgtttgttctttgaaga-gcgttgacaaagtacaattgtacgaagtgtacaaccacta 39284702  T
Q  217 cctcc 221  Q
    |||||    
T  39284703 cctcc 39284707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 16309961 - 16310045
Alignment:
Q  131 tattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    ||||||||||| ||||||| |||||||||||| ||| ||   || |||||||||| |||||  ||| |||||||||||||||||||    
T  16309961 tattttgaaaggatttgaaggcattggatgcttgtt-ctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccacta 16310045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 220
Target Start/End: Complemental strand, 13880725 - 13880604
Alignment:
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||| ||| |||||||||||||||| ||  |||| ||||||| ||| |||||||| ||| ||   || |||||||| |||| ||  ||| |    
T  13880725 attgcagaagactagaagagtgaagcaacgactaattcaaaaggatttgaaggcactggatgcttgtt-ctttgaagagcgttgaaaaaggacaattgta 13880627  T
Q  199 cgaagt-gtacaaccactacctc 220  Q
    |||||| ||||||||||||||||    
T  13880626 cgaagtggtacaaccactacctc 13880604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 48805953 - 48806018
Alignment:
Q  151 gcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    ||||||||||||| ||| ||||| | ||||||||| |||||||| | || |||||||||||||||||    
T  48805953 gcattggatgctatttcttcaaaga-gcgttgacatagtacgttcgtacaaagtgtacaaccactac 48806018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 4494721 - 4494634
Alignment:
Q  22 catcagaagctgcagttcatcatgggatgca--acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaa 107  Q
    |||||||||||| ||||||||| | ||||||  |||||| |||||||| | | || |||||||| || |||||||||  |||||||||    
T  4494721 catcagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaa 4494634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 13472620 - 13472668
Alignment:
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgctagt 165  Q
    ||||||||||| ||||||||||||| ||||||  ||||| |||||||||    
T  13472620 agtgaagcaacaactattttgaaaggatttgatggcatttgatgctagt 13472668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 153; Significance: 3e-81; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 35040403 - 35040184
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||    
T  35040403 agtttatcagaagccaaaaatcaccagaagctgcaattcatcatgggatgcaacttaaggcttcaaaagttgtttaatggatccaacctcgtctaaagat 35040304  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| ||| ||||||| ||||||||||||||||||||| ||||||| |||||||||||| | || || ||| ||||||||||||||||||||| |||    
T  35040303 tgcagaagactagaaaagtaaagcaacgactattttgaaaggatttgaaagcattggatgcttgatcttc-aaagagcgttgacaaagtacgtttgtacg 35040205  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  35040204 aagtgtacaaccactacctcc 35040184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 2327282 - 2327502
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||||||| | |||||| ||||||| |||||||||||||    
T  2327282 agtttatcagaagccaaaaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttaatagattcaaactcgtctaaagat 2327381  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||  |||| |||||||||||||  ||||||||||||| ||| |||||||||||||||| ||||||||||| ||| ||||||||||||||||| |||    
T  2327382 tgcagatgactgaaaaagtgaagcaaaaactattttgaaaggattcgaacgcattggatgcttgttcctcaaaagagcattgacaaagtacgtttgtacg 2327481  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  2327482 aagtgtacaaccactacctcc 2327502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 25448407 - 25448628
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgc--agttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaag 98  Q
    ||||||||||||||  | |||||  |||||||||  |||||||||   |||||||||||| |||||||||||| ||||| |||||||| |||||||||||    
T  25448407 agtttatcagaagctgagaatcactagaagctgcgcagttcatcagaagatgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag 25448506  T
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||  ||| || ||| ||||||||||||||||||||| |    
T  25448507 attgcagaagactggaaaagtgaagcagcgactattttgaaaggatttgaaggcattggatgcttattcttc-aaagagcgttgacaaagtacgtttgta 25448605  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||||    
T  25448606 cgaagtgtacaaccactacctcc 25448628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 22427200 - 22427419
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||| |||||||||  ||||||| |||||||| |||||||||| | |||||||| ||| ||||||||  || || ||| |||| || |||||||||  ||    
T  22427200 agttcatcagaagctgaaaatcaccagaagctccagttcatcaggagatgcaacataaagcttcaaagactgttcaatagatttaatctcgtctaagcat 22427299  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| |||||||||||||||||||||||| |||||||| ||||||| |||||||||||| ||| || |||||||||||||||||||||  ||| |||    
T  22427300 tgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcattggatgcttgtt-cttaaaaaagcgttgacaaagtacaattgtacg 22427398  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  22427399 aagtgtacaaccactacctcc 22427419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 21 - 221
Target Start/End: Original strand, 14263312 - 14263513
Alignment:
Q  21 tcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaag-ctatttaat-ggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||  || || ||| ||||| || | ||||||| |||||||||| |||||| |||    
T  14263312 tcatcagaagcagcagttcatcatgtgatgcaacttaaggcttcaaaaaactgttcaattggattaaatcccgtctaaggattgcagaagactggagaag 14263411  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
      || |||||||||||||||||| ||||||| ||||||||| || ||||||| ||| ||||||| ||||| ||||||| |||||||||||||||||||||    
T  14263412 caaaacaacgactattttgaaaggatttgaaggcattggatacttgttcctc-aaagagcgttggcaaagcacgtttgtacgaagtgtacaaccactacc 14263510  T
Q  219 tcc 221  Q
    |||    
T  14263511 tcc 14263513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 221
Target Start/End: Complemental strand, 2834911 - 2834708
Alignment:
Q  17 aaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaa 116  Q
    ||||||| ||||||||||||||||||  | |||||||||||| ||||| |||| | || ||||||||||| |||||||||  ||||  ||| |||| |||    
T  2834911 aaaatcaccagaagctgcagttcatcgggagatgcaacttaaagcttccaaagttgttcaatggattcaatctcgtctaagcattgttgaagactgaaaa 2834812  T
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    |||||||||||| ||| |||||||| ||||||| |||||||||||| |||| ||||| || ||||||||||||||| ||| ||||| ||||||||||||     
T  2834811 agtgaagcaacggctaatttgaaaggatttgaaggcattggatgcttgttcttcaaagaa-cgttgacaaagtacgattgtacgaattgtacaaccactg 2834713  T
Q  217 cctcc 221  Q
    |||||    
T  2834712 cctcc 2834708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 221
Target Start/End: Complemental strand, 2267306 - 2267107
Alignment:
Q  21 tcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtg 120  Q
    |||||||||||| |||||||||| | |||||||| ||| |||||||| | | || |||||||| || |||||||||  ||||||||| ||||||||||||    
T  2267306 tcatcagaagctacagttcatcaggagatgcaacataaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaaaagtg 2267207  T
Q  121 aagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctc 220  Q
    ||||||| |||| |||||||||||||||| |||||||||| | |||| || ||| ||||||| |||||| |  ||| | |||||||||||||||||||||    
T  2267206 aagcaacaactagtttgaaagaatttgaaggcattggatgtttgttcttc-aaagagcgttgtcaaagtgcaattgtatgaagtgtacaaccactacctc 2267108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 221
Target Start/End: Original strand, 22600028 - 22600244
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    ||||||||| ||| |||| ||||||||  ||||||||| | |||||||  ||||| |||||||| ||| || |||||||| || || ||||||  |||||    
T  22600028 atcagaagctaaagatcaccagaagctctagttcatcaggagatgcaagacttaaagcttcaaaggctgttcaatggatttaatcttgtctaagcattgc 22600127  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| ||||||| ||| || |||||||||||||||||| ||||||| |||||||||||| |||| || ||| ||||||||||||||||  ||| ||||||    
T  22600128 agaagactggaagagtaaaacaacgactattttgaaaggatttgaaggcattggatgcttgttcttc-aaagagcgttgacaaagtacaattgtacgaag 22600226  T
Q  204 tgtacaaccactacctcc 221  Q
    ||||||||||||| ||||    
T  22600227 tgtacaaccactatctcc 22600244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 48570077 - 48570293
Alignment:
Q  3 tttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattg 102  Q
    ||||||||||||  | ||||| ||||||||| | ||||||| | |||||||||||| | |||||||||| ||||| |||||||| ||||||| |||||||    
T  48570077 tttatcagaagctgagaatcaccagaagctgtaattcatcaggagatgcaacttaaagtttcaaaagctgtttaacggattcaaactcgtct-aagattg 48570175  T
Q  103 cagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaa 202  Q
    ||||| ||| |||||||  | |||||||||||||| ||| |||  || ||||||||||||  ||| || ||| |||||||||| |||||||||| |||||    
T  48570176 cagaagactagaaaagtataacaacgactattttggaaggattaaaaggcattggatgcttattcttc-aaagagcgttgacatagtacgtttgtacgaa 48570274  T
Q  203 gtgtacaaccactacctcc 221  Q
    |||||||||||||| ||||    
T  48570275 gtgtacaaccactatctcc 48570293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 46089198 - 46089007
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagt 119  Q
    |||| ||||||||||||||||||||| |||||||||||| |||||||||||| ||| | |||||||| |||| ||||| ||||||||| |||||||||||    
T  46089198 atcaccagaagctgcagttcatcatgagatgcaacttaaagcttcaaaagctgtttcaaggattcaaactcgcctaaaaattgcagaagactggaaaagt 46089099  T
Q  120 gaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacct 219  Q
       |||||||||||||||||||         ||||||||||||  ||| || ||| |||||||||| |||||||||| ||||||||||||||||||| ||    
T  46089098 atggcaacgactattttgaaag---------gcattggatgcttattcttc-aaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatct 46089009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 221
Target Start/End: Original strand, 39200851 - 39201054
Alignment:
Q  17 aaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaa 116  Q
    ||||||| || |||||||||||||| | | |||||||| ||| |||||||||||| || |||||||| || ||| | |||  ||||||||| |||| ||     
T  39200851 aaaatcaccaaaagctgcagttcattaggagatgcaacataaagcttcaaaagctgttcaatggatttaatctcatgtaagcattgcagaagactgaaag 39200950  T
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    |||||||||||| ||| |||||||| |||||||  ||||||||||| |||| || ||| ||||||||||||||||  ||| |||||||||||||||||||    
T  39200951 agtgaagcaacggctagtttgaaaggatttgaagacattggatgcttgttcttc-aaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 39201049  T
Q  217 cctcc 221  Q
    |||||    
T  39201050 cctcc 39201054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 29216029 - 29215815
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcag 105  Q
    |||||||||  ||||||| |||||| |||| ||||||| | |||||||||||| |||||||| | | ||||||||||| || |||||||||  ||||||     
T  29216029 atcagaagctgaaaatcaccagaagttgcaattcatcaggagatgcaacttaaagcttcaaaggttgtttaatggatttaatctcgtctaagcattgcaa 29215930  T
Q  106 aatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtg 205  Q
    || ||| |||||||||||||||| ||| |||||||| ||||||| |||||||||||| |||| || ||| |||| | |||||||||  ||| ||||||||    
T  29215929 aagactagaaaagtgaagcaacggctagtttgaaaggatttgaaggcattggatgcttgttcttc-aaagagcgataacaaagtacaattgtacgaagtg 29215831  T
Q  206 tacaaccactacctcc 221  Q
    ||||| ||||| ||||    
T  29215830 tacaatcactagctcc 29215815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 221
Target Start/End: Original strand, 32785795 - 32785999
Alignment:
Q  17 aaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactgga 114  Q
    |||||||  ||||| || ||||||||||| |||||||  ||||| |||||||| | | || | |||||| || |||||||||  ||||||||| ||||||    
T  32785795 aaaatcactagaagttgtagttcatcatgagatgcaagacttaaagcttcaaaggttgttca-tggatttaatctcgtctaagcattgcagaagactgga 32785893  T
Q  115 aaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccac 214  Q
    |||||||||||||||||| |||||||| ||||||| |||||||||||| ||| || |||| ||||||||||||||||  ||| |||||||||||||||||    
T  32785894 aaagtgaagcaacgactagtttgaaaggatttgaaggcattggatgcttgtt-cttaaaagagcgttgacaaagtacaattgtacgaagtgtacaaccac 32785992  T
Q  215 tacctcc 221  Q
    || ||||    
T  32785993 tatctcc 32785999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 1900579 - 1900363
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    ||||||||| ||| |||  |||||| |  ||||||||| | |||||||  ||||| |||||||| | |||| |||||||| || |||||||||  |||||    
T  1900579 atcagaagctaaagatcgccagaagatctagttcatcaggagatgcaagacttaaagcttcaaaggttattcaatggatttaatctcgtctaagcattgc 1900480  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| ||||||| ||||||||||||||||||||||||| |||| || |||||| ||||| |||| || ||| ||||||||||||||||  ||| | ||||    
T  1900479 agaagactggaagagtgaagcaacgactattttgaaaggatttaaaggcattgaatgcttgttcttc-aaagagcgttgacaaagtacagttgtaagaag 1900381  T
Q  204 tgtacaaccactacctcc 221  Q
    ||||||||||||||||||    
T  1900380 tgtacaaccactacctcc 1900363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 35401994 - 35401827
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| ||||||||  || || |||||||| || ||||| |||| | | ||||| ||||||||||||||||||||||||||||||||| ||||||| ||    
T  35401994 acttaaagcttcaaagactgttcaatggatttaatctcgtttaaacaatacagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggc 35401895  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||| |||| || ||| ||||||||||||||||  ||| || |||||||||||||||||||||    
T  35401894 attggatgcttgttcttc-aaagagcgttgacaaagtacaattgtacaaagtgtacaaccactacctcc 35401827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 44821388 - 44821607
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||  | ||||| || |||||| ||||||||| | |||||||||||| |||||||||| | ||||| |||||||| ||||||||| | |    
T  44821388 agtttatcagaagctgagaatcaccataagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaaaggattcaaactcgtctaaggtt 44821487  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    || |||| |||| ||||||  |||||||||||||||| ||| ||||||| || ||| |||||  ||| || ||| || ||||||| |||||||||| |||    
T  44821488 tgtagaagactgaaaaagtatagcaacgactattttggaaggatttgaaggctttgtatgcttattcttc-aaagagtgttgacatagtacgtttgtacg 44821586  T
Q  201 aagtgtacaaccactacctcc 221  Q
    ||||||||||| |||| ||||    
T  44821587 aagtgtacaactactatctcc 44821607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 21703032 - 21702832
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| ||||||||||||||||||| | |||||||||||| |||||||||  | ||| | |||||||| ||||||| |||||||||||| ||| ||||||    
T  21703032 aatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaatttgtttcaaggattcaaactcgtct-aagattgcagaagacttgaaaag 21702934  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    |  ||||||| |||||||||||| |||  |  |||||| |||||  ||| || ||| |||||||||| |||||||||| ||||||||||||||||||| |    
T  21702933 tatagcaacggctattttgaaaggattgaagggcattgaatgcttattcttc-aaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatc 21702835  T
Q  219 tcc 221  Q
    |||    
T  21702834 tcc 21702832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 22154077 - 22153875
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| ||||||||| ||||||||| | |||||||  ||||| |||||||| ||| || |||||||| || |||||||||  ||||||||| ||| ||| |    
T  22154077 atcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactagaata 22153978  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    |||||||||| |||| |||||||| ||||||| |||||||||| | ||| ||   || ||||||||||||||||  ||| ||||||||||||||||||||    
T  22153977 gtgaagcaacaactaatttgaaaggatttgaaagcattggatgattgtt-ctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactac 22153879  T
Q  218 ctcc 221  Q
    ||||    
T  22153878 ctcc 22153875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 16235226 - 16235358
Alignment:
Q  88 ctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaa 187  Q
    |||||||||| | ||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| ||| ||| ||| || |||||||||    
T  16235226 ctcgtctaaacaatgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattgaatgcttgtt-ctccaaagagtgttgacaaa 16235324  T
Q  188 gtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||  ||| |||||||||||||| |||||||||    
T  16235325 gtacaattgtacgaagtgtacaacaactacctcc 16235358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 221
Target Start/End: Original strand, 22464667 - 22464871
Alignment:
Q  17 aaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctattt-aatggattcaacctcgtctaaagattgcagaatactggaa 115  Q
    ||||||| |||| ||| |||||||||| | |||| ||| ||| |||||||||| |  || || ||||| || ||| |||||  ||||||||| |||||||    
T  22464667 aaaatcaccagatgctacagttcatcaggagatgtaacataaagcttcaaaaggttgttcaacggatttaatctcatctaagcattgcagaagactggaa 22464766  T
Q  116 aagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccact 215  Q
    ||||||||||||||||| |||||||  ||||||| |||||||||||| |||| || ||| ||||||||||||||||   || |||||||||||| |||||    
T  22464767 aagtgaagcaacgactaatttgaaatgatttgaaggcattggatgcttgttcttc-aaagagcgttgacaaagtacaagtgtacgaagtgtacatccact 22464865  T
Q  216 acctcc 221  Q
    ||||||    
T  22464866 acctcc 22464871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 76 - 221
Target Start/End: Complemental strand, 36134351 - 36134208
Alignment:
Q  76 aatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaa 175  Q
    |||||||| || ||| |||||| | ||||||| |||||||||||| |||||| ||||||||||||| ||||||| |||||||||||| |||| || |||     
T  36134351 aatggatttaatctcatctaaacaatgcagaagactggaaaagtggagcaacaactattttgaaaggatttgaa-gcattggatgcttgttcttc-aaag 36134254  T
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||  ||| ||||||||||||||||||||||||    
T  36134253 agcgttgacaaagtacaattgtacgaagtgtacaaccactacctcc 36134208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 28492245 - 28492466
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaag 98  Q
    |||| |||||||||  || ||| ||||||| || ||||||||| | |||||||  ||||| |||||||| | | || |||||||| ||  ||||||||      
T  28492245 agttcatcagaagctgaagatcttcagaagttgtagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatatcgtctaagc 28492344  T
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||| ||| ||||||||||| ||||||||||||| ||||||| |||||||||||| ||| ||   || ||||||||||||||||  ||| |    
T  28492345 attgcagaagactagaagagtgaagcaacaactattttgaaaggatttgaaggcattggatgcttgtt-ctttgaatagcgttgacaaagtacaattgta 28492443  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||| ||||    
T  28492444 cgaagtgtacaaccactatctcc 28492466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 30572415 - 30572215
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| |||||| |||||||||||| | ||| |||||||| ||||||| |||| ||| | |||||||| ||||||| | |||||||||| ||||||||||    
T  30572415 aatcaccagaagttgcagttcatcaggagatacaacttaaagcttcaatagctgtttcaaggattcaaactcgtctga-gattgcagaagactggaaaag 30572317  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    |  ||||||| |||||||||||| |||  || |||||||||| |  || || | || |||||||||| |||||| ||| ||||||||||||||||||| |    
T  30572316 tatagcaacggctattttgaaaggattgaaaagcattggatgtttatt-cttagaagagcgttgacatagtacgattgtacgaagtgtacaaccactatc 30572218  T
Q  219 tcc 221  Q
    |||    
T  30572217 tcc 30572215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 23036422 - 23036589
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| |||||| |||||||| || |||||||||| | ||||||| |||  ||||||||| |||| ||||||||||||| |||||||  |    
T  23036422 acttaaagcttcaaaggctattcaatggatttaatctcgtctaaataatgcagaagactaaaaaagtgaaacaacaactattttgaaaggatttgaagac 23036521  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||| |||| || ||| |||||  |||||| ||  ||| ||||||||||||||||||||||||    
T  23036522 attggatgcttgttcttc-aaagagcgtcaacaaagaacaattgtacgaagtgtacaaccactacctcc 23036589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 33256246 - 33256413
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| | | || |||||||| || |||||||||  ||||||||| ||||||| |||||||||||||||||||| |||| ||||||| ||    
T  33256246 acttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttaaaaggatttgaaggc 33256345  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||| ||| ||   ||  |||||||||||||||  ||| ||||||||||||||||||| ||||    
T  33256346 attggatgcttgtt-ctttgaagggcgttgacaaagtacaattgtacgaagtgtacaaccactatctcc 33256413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 33276418 - 33276585
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| | | || |||||||| || |||||||||  ||||||||| ||||||| |||||||||||||||||||| |||| ||||||| ||    
T  33276418 acttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttaaaaggatttgaaggc 33276517  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||| ||| ||   ||  |||||||||||||||  ||| ||||||||||||||||||| ||||    
T  33276518 attggatgcttgtt-ctttgaagggcgttgacaaagtacaattgtacgaagtgtacaaccactatctcc 33276585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 221
Target Start/End: Original strand, 7744938 - 7745152
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcag 105  Q
    ||||||||||| | |||| |||||||||||||||||||   |||||||| ||  | |||||||| | |||||||||||||| ||| |||||||| ||||     
T  7744938 atcagaagccatatatcaccagaagctgcagttcatcagaagatgcaacctacagtttcaaaagttgtttaatggattcaaactcatctaaagagtgcat 7745037  T
Q  106 aatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtg 205  Q
    || |||| | ||| | ||||||   || |||||||| ||||||| ||||| ||||||   ||||  ||| ||||||||||||||||||||  || |||||    
T  7745038 aagactgaagaagagtagcaacagttaatttgaaaggatttgaatgcatttgatgct-tatccttcaaagagcgttgacaaagtacgtttatacaaagtg 7745136  T
Q  206 tacaaccactacctcc 221  Q
    ||||||||||||||||    
T  7745137 tacaaccactacctcc 7745152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 1578017 - 1577885
Alignment:
Q  88 ctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaa 187  Q
    |||||||||  ||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||| ||   || ||||||||||||    
T  1578017 ctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttgaaagaatttgaaagcattggatgcttgtt-cttttaagagcgttgacaaa 1577919  T
Q  188 gtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||   ||| || |||||||||||||||| ||||    
T  1577918 gtataattgtactaagtgtacaaccactatctcc 1577885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 10251213 - 10251096
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||| ||||||||| |  ||||| ||||||||||||||||||| | |||||||||||| |||||||||| | ||||| |||||||| ||||||| |||||    
T  10251213 agttcatcagaagctatgaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttaaaggattcaaactcgtct-aagat 10251115  T
Q  101 tgcagaatactggaaaagt 119  Q
    ||||||| |||||||||||    
T  10251114 tgcagaagactggaaaagt 10251096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 53 - 220
Target Start/End: Complemental strand, 2268713 - 2268550
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    ||||||||||||||| | | || |||||||| || |||||||||  |||| |||| ||||||| ||| |||||||   ||||||||||  ||||||| ||    
T  2268713 acttaaggcttcaaaggttgttcaatggatttaatctcgtctaatcattgtagaagactggaagagttaagcaac---tattttgaaatgatttgaaggc 2268617  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctc 220  Q
    |||| ||||| |||| ||||| | |||||||||||||||  ||| |||||||||||||||||||||||    
T  2268616 attgaatgcttgttcgtcaaaga-gcgttgacaaagtacaattgtacgaagtgtacaaccactacctc 2268550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 22201666 - 22201798
Alignment:
Q  88 ctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaa 187  Q
    |||||||||  ||||||||| |||| |||||| ||||||| ||||||||||||| ||||||| |||||||||||| |||| |   || ||||||||||||    
T  22201666 ctcgtctaagcattgcagaagactgaaaaagtaaagcaacaactattttgaaaggatttgaaggcattggatgcttgttc-tatgaagagcgttgacaaa 22201764  T
Q  188 gtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||  ||| ||||||||||||||||||| ||||    
T  22201765 gtacaattgtacgaagtgtacaaccactatctcc 22201798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 19717709 - 19717542
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| | | || |||||||| || |||||| ||  ||||||||  ||||||| ||||||||||||||||||||||||| ||||||| ||    
T  19717709 acttaaagcttcaaaggttgttcaatggatttaatctcgtcgaagcattgcagaggactggaagagtgaagcaacgactattttgaaaggatttgaaggc 19717610  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    || ||||||| ||| ||   || ||||||||||||||||  ||| |||||||||||||| |||| ||||    
T  19717609 atcggatgcttgtt-ctttgaagagcgttgacaaagtacaattgtacgaagtgtacaacaactaactcc 19717542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 38282800 - 38282585
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    |||||| || ||| |||| || |||||  ||||||||| | |||||||  ||||| |||||||| | | || |||||||| || |||||||||  || ||    
T  38282800 atcagatgctaaagatcaccaaaagctctagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcatcgc 38282701  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| ||||||| ||||||||||||  ||||||||||| |||| || |||||| ||||| |||| || ||| ||||||||||||||||  ||| ||||||    
T  38282700 agaagactggaagagtgaagcaacgggtattttgaaaggatttaaaggcattgaatgcttgttcttc-aaagagcgttgacaaagtacaattgtacgaag 38282602  T
Q  204 tgtacaaccactacctcc 221  Q
    | ||||||||||| ||||    
T  38282601 t-tacaaccactatctcc 38282585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 7310003 - 7309837
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||||||| || ||||||||||   |||||||| |||||||||| |||  || ||||||||||||   |||||| | | ||||||| ||    
T  7310003 acttaaagcttcaaaagctgttcaatggattcagtgtcgtctaaggattgcagaagactataagagtgaagcaacggtcattttgtagggatttgaaggc 7309904  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||| |||| ||  ||||||||| ||  |||||  ||| ||||||||||||||||||||||||    
T  7309903 attggatgctcgttcttc--aaaagcgttaacgtagtacaattgtacgaagtgtacaaccactacctcc 7309837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 216
Target Start/End: Complemental strand, 10757642 - 10757444
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctattt-aatggattcaacctcgtctaaagattgcagaatactggaaa 116  Q
    ||||||| |||||| ||||||||| | |||||||  ||||| |||||||||| |  || |||||||| || |||||||||  ||||||||| |   |||     
T  10757642 atcatcaaaagctgaagttcatcaggagatgcaagacttaaagcttcaaaaggttgttcaatggatttaatctcgtctaagcattgcagaaaatcagaag 10757543  T
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||| | ||| ||   || ||| ||||||||||||  ||| |||||||||||||||||||    
T  10757542 agtgaagcaacaactattttgaaaggatttgaaagcattggatgattgtt-ctttgaagagcattgacaaagtacaattgtacgaagtgtacaaccacta 10757444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 12284643 - 12284441
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| ||||||||| |||||||||   |||||||  ||||  |||||||| | | || ||||||||||| |||||| ||  |||||| || ||  ||  |    
T  12284643 atcaccagaagctgaagttcatcagaagatgcaagacttagagcttcaaaggttgttcaatggattcaatctcgtccaagcattgcaaaagaccagagga 12284544  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| ||| ||   || |||||||||| |||||  ||| ||||||||||||| |||||     
T  12284543 gtgaagcaacgactattttgaaaggatttgaaagcattggatgcttgtt-ctttgaagagcgttgacatagtacaattgtacgaagtgtacaaacactat 12284445  T
Q  218 ctcc 221  Q
    ||||    
T  12284444 ctcc 12284441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 53 - 213
Target Start/End: Complemental strand, 48704389 - 48704230
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| | | || |||||||| || ||||| |||  | ||||||| ||||||| |||||| |||| ||||||||||||| ||||||| ||    
T  48704389 acttaaagcttcaaaggttgttcaatggatttaatctcgtttaagcaatgcagaagactggaagagtgaaacaacaactattttgaaaggatttgaaggc 48704290  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaacca 213  Q
    | |||||||| |||| |  || || ||||||||||||||  ||| ||||||||||||||||    
T  48704289 actggatgcttgttctttgaagaa-cgttgacaaagtacaattgtacgaagtgtacaacca 48704230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 42284836 - 42284646
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagt 119  Q
    |||| |||||||||||||||||||   |||  |||||||   |||||||||| ||| | ||| || | |||| ||||||||||||||| ||||||||| |    
T  42284836 atcaccagaagctgcagttcatcagaagattgaacttaaattttcaaaagctgtttcaaggactctaactcgcctaaagattgcagaagactggaaaatt 42284737  T
Q  120 gaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacct 219  Q
    |  ||| ||||||||||||||          ||||||||||||  ||| ||||| | ||||||||| |||||||||| ||||||||||||||||||||||    
T  42284736 gtggca-cgactattttgaaat---------gcattggatgctttttcttcaaaga-gcgttgacatagtacgtttgtacgaagtgtacaaccactacct 42284648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 221
Target Start/End: Original strand, 17024923 - 17025026
Alignment:
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    |||||||||||||||| ||  |||| ||||||| |||||||||||| ||| ||  ||| |||||||| |||  ||  ||| |||||||||||||||||||    
T  17024923 agtgaagcaacgactaattcaaaaggatttgaaggcattggatgcttgtt-ctttaaagagcgttgaaaaatgacaattgtacgaagtgtacaaccacta 17025021  T
Q  217 cctcc 221  Q
    |||||    
T  17025022 cctcc 17025026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 21191806 - 21191927
Alignment:
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||  ||| |||||||||||  ||| ||  |||| ||||||| |||||||||||| |||| |  || | |||||| ||||||||  ||| |    
T  21191806 attgcagaagaccagaagagtgaagcaacagctaattcaaaaggatttgaaggcattggatgcttgttctttgaaga-gcgttggcaaagtacaattgta 21191904  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||||    
T  21191905 cgaagtgtacaaccactacctcc 21191927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 21204916 - 21204981
Alignment:
Q  151 gcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    |||||||||| || ||| ||||| | ||||||||| |||||||||| ||||||||||||||||||||    
T  21204916 gcattggatgttaattcttcaaaga-gcgttgacatagtacgtttgtacgaagtgtacaaccactac 21204981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 21984683 - 21984618
Alignment:
Q  151 gcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    ||||||||||||  ||| ||||| | ||||||||| |||||||||| ||||||||||||||||||||    
T  21984683 gcattggatgcttattcttcaaaga-gcgttgacatagtacgtttgtacgaagtgtacaaccactac 21984618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 37642335 - 37642270
Alignment:
Q  151 gcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    ||||||||||||| ||| ||||| | ||||||||| |||||||||  ||||||||||||||||||||    
T  37642335 gcattggatgctaattcttcaaaga-gcgttgacatagtacgtttatacgaagtgtacaaccactac 37642270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 21121057 - 21121122
Alignment:
Q  151 gcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    ||||||||||||  ||| ||||| | ||||||||| |||||||||| |||| |||||||||||||||    
T  21121057 gcattggatgcttattcttcaaaga-gcgttgacatagtacgtttgtacgacgtgtacaaccactac 21121122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 21135180 - 21135217
Alignment:
Q  179 gttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    ||||||| |||||||||| |||||||||||||||||||    
T  21135180 gttgacatagtacgtttgtacgaagtgtacaaccacta 21135217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 23024875 - 23024811
Alignment:
Q  151 gcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    ||||||||||||  ||||||||  | ||||||||| ||| |||||| |||||||||||||||||||    
T  23024875 gcattggatgcttattcctcaagga-gcgttgacatagtgcgtttgtacgaagtgtacaaccacta 23024811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 219
Target Start/End: Original strand, 12613756 - 12613874
Alignment:
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||  ||| |||||||||||| ||| ||  ||||| |||||| ||||||| |||| |||| |  || | |||||| ||||||||  ||| |    
T  12613756 attgcagaagaccagaagagtgaagcaacggctaattcaaaaga-tttgaaagcattggttgcttgttctttgaaga-gcgttggcaaagtacaattgta 12613853  T
Q  199 cgaagtgtacaaccactacct 219  Q
    |||||||||||||||||||||    
T  12613854 cgaagtgtacaaccactacct 12613874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 26702151 - 26702191
Alignment:
Q  181 tgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||||  ||| ||||||||||||||||||||||||    
T  26702151 tgacaaagtacaattgtacgaagtgtacaaccactacctcc 26702191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 221
Target Start/End: Complemental strand, 30893213 - 30893110
Alignment:
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    |||||||||| | |||||||||||| ||||||| ||| | |||||| ||| ||   || |||| ||||| |||||  ||| |||||||||||||||||||    
T  30893213 agtgaagcaaaggctattttgaaaggatttgaaagcactagatgcttgtt-ctttgaatagcgctgacatagtacaattgtacgaagtgtacaaccacta 30893115  T
Q  217 cctcc 221  Q
     ||||    
T  30893114 tctcc 30893110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 150; Significance: 2e-79; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 6392867 - 6392646
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatg-gattcaacctcgtctaaaga 99  Q
    |||||||||||||| |||||||| || ||| ||||||||||||  ||||||| |||||||||||||||||| ||||||| ||||||||||||||||| ||    
T  6392867 agtttatcagaagctaaaaatcaccataagttgcagttcatcagaggatgcatcttaaggcttcaaaagctgtttaatgtgattcaacctcgtctaagga 6392768  T
Q  100 ttgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaac 199  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  6392767 ttgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgtac 6392668  T
Q  200 gaagtgtacaaccactacctcc 221  Q
    ||||||  ||||||||||||||    
T  6392667 gaagtgcgcaaccactacctcc 6392646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 28711565 - 28711785
Alignment:
Q  1 agtttatcagaagccaaaaa-tcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaaga 99  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  28711565 agtttatcagaagccaaaaaatcaccagaagctgcagttcataatgggatgcaacttaaggcttcaaaagctgtttaatggattcaaccttgtctaaaga 28711664  T
Q  100 ttgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaac 199  Q
    |||||||| ||||||||||| ||||||||||||||| ||| ||||||||| |||||||||||| |||| || ||| |||||||| |||||||||||| ||    
T  28711665 ttgcagaagactggaaaagtaaagcaacgactatttcgaatgaatttgaaggcattggatgcttgttcttc-aaagagcgttgaaaaagtacgtttgtac 28711763  T
Q  200 gaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||||||||    
T  28711764 gaagtgtacaaccactacctcc 28711785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 30557187 - 30557408
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatgg-attcaacctcgtctaaaga 99  Q
    |||| ||||||||| ||| |||| |||||||||||||||||||  |||||||||||||||||||||||  | |||||||| |||||||||||||||| ||    
T  30557187 agttcatcagaagctaaatatcaccagaagctgcagttcatcagaggatgcaacttaaggcttcaaaaattgtttaatgggattcaacctcgtctaagga 30557286  T
Q  100 ttgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaac 199  Q
    |||||||  |||| |||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  30557287 ttgcagaggactgaaaaagtgaagcatcgactattttgaaagaatttgaacacattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgtac 30557386  T
Q  200 gaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||||||||    
T  30557387 gaagtgtacaaccactacctcc 30557408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 28701096 - 28701316
Alignment:
Q  1 agtttatcagaagccaaaaa-tcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaaga 99  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||    
T  28701096 agtttatcagaagccaaaaaatcaccagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctgtttaatagattcaacctcgtcttaaga 28701195  T
Q  100 ttgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaac 199  Q
    |||||||| ||||||||||| |||||||   ||||||||||| ||||||| |||||||||||| |||| || |||  |||||||||||||| ||||| ||    
T  28701196 ttgcagaagactggaaaagtaaagcaacagatattttgaaaggatttgaaggcattggatgcttgttcttc-aaagggcgttgacaaagtaagtttgtac 28701294  T
Q  200 gaagtgtacaaccactacctcc 221  Q
    |||||||||||||| |||||||    
T  28701295 gaagtgtacaaccattacctcc 28701316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 45087050 - 45087269
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaa-gctatttaatgg-attcaacctcgtctaaag 98  Q
    |||||||||||||| ||| ||||  ||||||| ||||||||||  ||||||||||||| ||||||||| | | |||||||| |||||||||||||||| |    
T  45087050 agtttatcagaagctaaatatcactagaagctacagttcatcagaggatgcaacttaaagcttcaaaaagttgtttaatgggattcaacctcgtctaagg 45087149  T
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  || ||||||| ||||||||||||||||||||| |    
T  45087150 attgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaatgcattagatgcttatt-ctcaaaagagcgttgacaaagtacgtttgta 45087248  T
Q  199 cgaagtgtacaaccactacct 219  Q
    |||||||||||||||||||||    
T  45087249 cgaagtgtacaaccactacct 45087269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 31800755 - 31800974
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||||||||||||| || ||||| ||||| |||||||||||||||||||||||||||| ||||||||||||  ||| ||||| ||| ||||||||   ||    
T  31800755 agtttatcagaagcaaataatcaccagaaactgcagttcatcatgggatgcaacttaaagcttcaaaagctgcttagtggatccaaactcgtctatttat 31800854  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| |||||||||||||| |||| ||||||||||||| ||||||| |||||||||| | | || || ||| |||||||||||||||| |||| |||    
T  31800855 tgcagaagactggaaaagtgaaacaacaactattttgaaaggatttgaaagcattggatgtttgatcttc-aaagagcgttgacaaagtacatttgtacg 31800953  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||| ||||    
T  31800954 aagtgtacaaccactatctcc 31800974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 22802670 - 22802473
Alignment:
Q  23 atcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaa 122  Q
    ||||||| ||||||||||||| | |||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||| ||| |||| || ||    
T  22802670 atcagaacctgcagttcatcaggagatgcaacttaaagattcaaaagctatttaatggattcaaactcgtctaaagattgcagaagactagaaaggtaaa 22802571  T
Q  123 gcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||| | |||||||||||| ||||||| ||||  ||||||  ||| || ||| || |||||||||||||||||| ||||||||||||||||||||||||    
T  22802570 gcaatggctattttgaaaggatttgaaggcatatgatgcttattcttc-aaagagagttgacaaagtacgtttgtacgaagtgtacaaccactacctcc 22802473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 20151902 - 20152118
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaac-ttaaggcttcaaaagctatttaatggattcaacctcgtctaaaga 99  Q
    |||| |||||||||  ||||||| |||||||||||| |||||| | |||||||| |||| |||||||||| | || |||||||| || |||||||||  |    
T  20151902 agttcatcagaagctgaaaatcaccagaagctgcagctcatcaggagatgcaacattaaagcttcaaaagttgttcaatggatttaatctcgtctaagca 20152001  T
Q  100 ttgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaac 199  Q
    |||||||| ||||||||||||||||||||  || |||||||| ||||||| |||||||||||| |||| || ||| ||||||||||||||||  ||| ||    
T  20152002 ttgcagaagactggaaaagtgaagcaacggttagtttgaaaggatttgaaggcattggatgcttgttcttc-aaagagcgttgacaaagtacaattgtac 20152100  T
Q  200 gaagtgtacaaccactac 217  Q
    ||||||||||||||||||    
T  20152101 gaagtgtacaaccactac 20152118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 31327833 - 31328053
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaa-gctatttaatggattcaacctcgtctaaaga 99  Q
    ||||||||||||||    ||||| ||||||||||||||||||| | |||||||||||| | ||||||| | | || || |||||||| |||| |||||||    
T  31327833 agtttatcagaagctgtgaatcaccagaagctgcagttcatcaggagatgcaacttaaagtttcaaaaagttgttcaacggattcaaactcgcctaaaga 31327932  T
Q  100 ttgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaac 199  Q
    |||||||| ||| || |||||||||||||||||||||| | |  |||||| |||||||||||| |||| || ||| ||||||||||||||| ||| ||||    
T  31327933 ttgcagaagactagagaagtgaagcaacgactattttggagggttttgaaagcattggatgcttgttcttc-aaagagcgttgacaaagtatgttcgaac 31328031  T
Q  200 gaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||||||||    
T  31328032 gaagtgtacaaccactacctcc 31328053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 31334554 - 31334774
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaa-gctatttaatggattcaacctcgtctaaaga 99  Q
    ||||||||||||||    ||||| ||||||||||||||||||| | |||||||||||| | ||||||| | | || || |||||||| |||| |||||||    
T  31334554 agtttatcagaagctgtgaatcaccagaagctgcagttcatcaggagatgcaacttaaagtttcaaaaagttgttcaacggattcaaactcgcctaaaga 31334653  T
Q  100 ttgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaac 199  Q
    |||||||| ||| || |||||||||||||||||||||| | |  |||||| |||||||||||| |||| || ||| ||||||||||||||| ||| ||||    
T  31334654 ttgcagaagactagagaagtgaagcaacgactattttggagggttttgaaagcattggatgcttgttcttc-aaagagcgttgacaaagtatgttcgaac 31334752  T
Q  200 gaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||||||||    
T  31334753 gaagtgtacaaccactacctcc 31334774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 34321804 - 34322018
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||  | |||||  |||||||| | ||||||| | |||||||||||| || ||||||||| ||||| |||||||| |||||||||||||    
T  34321804 agtttatcagaagctgagaatcactagaagctgtaattcatcaggagatgcaacttaaagcctcaaaagctgtttaaaggattcaaactcgtctaaagat 34321903  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    |||||||  ||||||||||  |||||||||||||||||||| |||  || ||||||||| ||  ||| || ||| |||||||||| |||||||||| | |    
T  34321904 tgcagaagcctggaaaagtatagcaacgactattttgaaaggattgaaaggcattggattcttattcttc-aaagagcgttgacatagtacgtttgtatg 34322002  T
Q  201 aagtgtacaaccacta 216  Q
    ||||||||||||||||    
T  34322003 aagtgtacaaccacta 34322018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 33074458 - 33074239
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||  | |||||  ||||| || ||||||||| | ||||||||||||  ||||||||||| ||||| |||||||| |||||||||||||    
T  33074458 agtttatcagaagctgagaatcactagaagttgtagttcatcaggagatgcaacttaaaacttcaaaagctgtttaaaggattcaaactcgtctaaagat 33074359  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| |||||||||||  |||||||||||||||| |   ||| ||| ||||| ||||||  ||| |||||||| |||||||| | |||| ||| |||    
T  33074358 tgcagaagactggaaaagtatagcaacgactattttggacagattggaaggcattagatgcttattcttcaaaaaa-cgttgacataatacgattgtacg 33074260  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||| ||||    
T  33074259 aagtgtacaaccactatctcc 33074239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 23235236 - 23235020
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    |||||||||  ||||||| ||||||||  ||||||||||| |||||||  ||||| |||||||| ||| || |||||||| || |||||||||  |||||    
T  23235236 atcagaagctgaaaatcaccagaagctctagttcatcatgagatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgc 23235137  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| ||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||  || ||   || || |||||||||||||  ||| ||||||    
T  23235136 agaagactggaagagtaaagcaacgactattttgaaagaatttgaaggcattggatgcttatt-ctttgaagagtgttgacaaagtacaattgtacgaag 23235038  T
Q  204 tgtacaaccactacctcc 221  Q
    ||||||||||||| ||||    
T  23235037 tgtacaaccactatctcc 23235020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 35743870 - 35744087
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||||||| |||||  ||||||| ||||||||| ||||||||| | |||||||||||| || ||||||| | |||||  || |||| |  ||||||||||    
T  35743870 agtttatcggaagctgaaaatcaccagaagctgtagttcatcaggagatgcaacttaaagcgtcaaaagttgtttaacagactcaaac--gtctaaagat 35743967  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||||| |||||||||  |||||||||||||||| ||| ||||||| |||||| |||||| ||| || ||| |||||||||| |||||||||| |||    
T  35743968 tgcagaatattggaaaagtatagcaacgactattttggaaggatttgaaggcattgaatgctaattcttc-aaagagcgttgacatagtacgtttgtacg 35744066  T
Q  201 aagtgtacaaccactacctcc 221  Q
    || |||||||| |||| ||||    
T  35744067 aaatgtacaactactatctcc 35744087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 6573990 - 6574211
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaag-a 99  Q
    |||| |||||||||  |||||||  ||||| ||||||||||||   |||||||| ||| |||||||| | | || ||| |||| || ||||||||| | |    
T  6573990 agttcatcagaagctgaaaatcactagaagttgcagttcatcagaagatgcaacataaagcttcaaaggttgttcaattgatttaatctcgtctaatgca 6574089  T
Q  100 ttgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtac-gtttgaa 198  Q
    |||||||| |||||||||||||||||||||||| |||||||| ||||||| |||||||||| | |||| || ||| ||||||||||||||||   ||| |    
T  6574090 ttgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcattggatgtttgttcttc-aaagagcgttgacaaagtacaaattgta 6574188  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||||    
T  6574189 cgaagtgtacaaccactacctcc 6574211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 25829349 - 25829147
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| ||||||||  ||||||||| | |||||||  ||||  |||||||| | | || |||||||| || |||||||||  ||||||||| ||||||| |    
T  25829349 atcaccagaagctaaagttcatcaggagatgcaagacttagagcttcaaaggatgttcaatggatttaatctcgtctaagcattgcagaagactggaaga 25829250  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| ||| ||   || ||||||||||||||||  ||| |||||||||||||||||||     
T  25829249 gtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgtt-ctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactat 25829151  T
Q  218 ctcc 221  Q
    ||||    
T  25829150 ctcc 25829147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 216
Target Start/End: Original strand, 20568635 - 20568832
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| ||||||||| ||||||||| | |||||||  ||||| |||| ||| ||| ||  ||||||| || |||||||||  ||||||||| ||||||| |    
T  20568635 atcaccagaagctgtagttcatcaggagatgcaagacttaaagctttaaaggctgttccatggatttaatctcgtctaagcattgcagaagactggaaga 20568734  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    |||||||||| || |||||||||| ||||||| |||||||||||| ||| ||   || ||||||||||||||||  ||| |||||||||||||||||||    
T  20568735 gtgaagcaacaacaattttgaaaggatttgaaggcattggatgcttgtt-ctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 20568832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 55 - 221
Target Start/End: Original strand, 13963900 - 13964065
Alignment:
Q  55 ttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcat 154  Q
    |||| |||||||| | | || |||||||| || |||||||||  |||| |||| |||| || ||||||||||||||||||||||||||||||||| ||||    
T  13963900 ttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgtagaagactgaaagagtgaagcaacgactattttgaaagaatttgaaggcat 13963999  T
Q  155 tggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||| ||| ||   || ||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  13964000 tggatgcttgtt-ctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctcc 13964065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 30667201 - 30667002
Alignment:
Q  23 atcagaagctgcagttcatcatgggatgcaac--ttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtg 120  Q
    |||||||| || ||||||||| | |||||||   |||| |||||||| | | || |||||||| || |||||||||  ||||||||| ||||||| | ||    
T  30667201 atcagaagttgtagttcatcaggagatgcaagaattaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagaatg 30667102  T
Q  121 aagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctc 220  Q
    ||||||||||||||||||||| ||||||| |||||||||||| | | ||   || ||||||||||||||||  ||| ||||||||||||||||||| |||    
T  30667101 aagcaacgactattttgaaaggatttgaaggcattggatgcttgat-ctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctc 30667003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 1586910 - 1587120
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||| |||||||||  | ||||| ||||||||| ||||||||| | |||| ||||||| |||||||||| | ||||| |||||||| ||| ||| |||||    
T  1586910 agttcatcagaagctgagaatcaccagaagctggagttcatcaggagatggaacttaaagcttcaaaagttgtttaaaggattcaaactcatctgaagat 1587009  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| |||| ||||||    ||||| ||||||||||||         ||||||||||||| ||| || ||| |||||||||| |||||||||| |||    
T  1587010 tgcagaagactgaaaaagtattacaacggctattttgaaag---------gcattggatgctaattcttc-aaagagcgttgacatagtacgtttgtacg 1587099  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||| ||||    
T  1587100 aagtgtacaaccactatctcc 1587120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 217
Target Start/End: Complemental strand, 38781579 - 38781416
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| | | || ||| |||| || |||||||||| | || |||| ||||||||||||||||||| ||||||||||||| ||||||| ||    
T  38781579 acttaaagcttcaaaggttgttcaattgatttaatctcgtctaaacaatgtagaagactggaaaagtgaagcaacaactattttgaaaggatttgaaggc 38781480  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    |||| ||| | |||| || ||| ||||||||||||||||  ||| ||||||||||||||||||||    
T  38781479 attgaatgattgttcttc-aaagagcgttgacaaagtacaattgtacgaagtgtacaaccactac 38781416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 22317823 - 22317606
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    |||||||||  ||||||| ||||||||  | ||||||| | |||||||  ||||| |||||||| ||| || | |||||| || ||| |||||  |||||    
T  22317823 atcagaagctgaaaatcaccagaagctctatttcatcaagagatgcaagacttaaagcttcaaaggcttttcattggatttaatctcatctaagcattgc 22317724  T
Q  104 agaatactggaaaagtgaagcaacgactatttt-gaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaa 202  Q
    | || ||| ||| |||||||||||||||||||| ||||| |||| || |||||||||||| |||| ||||| | |||||||||||||||  ||| |||||    
T  22317723 ataagactagaagagtgaagcaacgactatttttgaaaggatttaaaggcattggatgcttgttcttcaaaga-gcgttgacaaagtacaattgtacgaa 22317625  T
Q  203 gtgtacaaccactacctcc 221  Q
    || ||||||||||||||||    
T  22317624 gtatacaaccactacctcc 22317606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 21 - 221
Target Start/End: Complemental strand, 44840635 - 44840447
Alignment:
Q  21 tcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtg 120  Q
    ||||||||||||||||||||||| | |||||||||||| |||||||||||| ||| | |||||||| |||| || || ||||||| | |||| ||||||     
T  44840635 tcatcagaagctgcagttcatcaagagatgcaacttaaagcttcaaaagctgtttcaaggattcaaactcgcct-aacattgcag-agactgaaaaagta 44840538  T
Q  121 aagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctc 220  Q
      |||||||||||||||||||         ||||||||||||  ||| || ||| |||||||||| |||||||||| ||||||||||||||||||| |||    
T  44840537 tggcaacgactattttgaaag---------gcattggatgcttattcttc-aaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 44840448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 221
Target Start/End: Original strand, 25037130 - 25037346
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    |||||||||  || |||| |||||| || ||||||||| | |||||||  ||||| |||||||| | | || ||||||||||| || ||| ||  |||||    
T  25037130 atcagaagctgaagatcaccagaagttgtagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggattcaatcttgtcgaagcattgc 25037229  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| ||||||| ||||| | |||||||| |||||||| ||||||| |||||||||| | ||| ||   |||||||||||||||||||  |||  |||||    
T  25037230 agaagactggaagagtgatgtaacgactaatttgaaaggatttgaaagcattggatgtttgtt-ctttgaaaagcgttgacaaagtacaattgttcgaag 25037328  T
Q  204 tgtacaaccactacctcc 221  Q
    ||||||||||||| ||||    
T  25037329 tgtacaaccactatctcc 25037346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 221
Target Start/End: Original strand, 25041237 - 25041453
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    |||||||||  || |||| |||||| || ||||||||| | |||||||  ||||| |||||||| | | || ||||||||||| || ||| ||  |||||    
T  25041237 atcagaagctgaagatcaccagaagttgtagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggattcaatcttgtcgaagcattgc 25041336  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| ||||||| ||||| | |||||||| |||||||| ||||||| |||||||||| | ||| ||   |||||||||||||||||||  |||  |||||    
T  25041337 agaagactggaagagtgatgtaacgactaatttgaaaggatttgaaagcattggatgtttgtt-ctttgaaaagcgttgacaaagtacaattgttcgaag 25041435  T
Q  204 tgtacaaccactacctcc 221  Q
    ||||||||||||| ||||    
T  25041436 tgtacaaccactatctcc 25041453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 28550814 - 28551005
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| ||||||||||||||||||| | ||||||| ||||  | ||||||||| ||| | |||||||| |||| ||||| ||||||||| ||||||||||    
T  28550814 aatcaccagaagctgcagttcatcaggagatgcaatttaaaacctcaaaagctgtttcaaggattcaaactcgcctaaa-attgcagaagactggaaaag 28550912  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    |  || ||| |||||||||||||         ||||||||||||  ||| || ||| |||||||||| |||||||||| ||||||||||||||||||| |    
T  28550913 tatagaaacaactattttgaaag---------gcattggatgcttattcttc-aaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatc 28551002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 18376826 - 18376993
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| ||| || |||||||| || |||||||||  ||||||||| | |  || |||||| |||| ||||||||||||| ||||||| ||    
T  18376826 acttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagattttaatagtgaatcaactactattttgaaaggatttgaaggc 18376925  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||| ||| ||   || ||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  18376926 attggatgcttgtt-ctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctcc 18376993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 19540631 - 19540429
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| ||||||||| ||||||||||| |||||||  ||||| |||||||| | | || |||||||| || ||| |||||  ||||||||| ||| | | |    
T  19540631 atcaccagaagctgaagttcatcatgagatgcaagacttaaagcttcaaatgttgttcaatggatttaatctcatctaagcattgcagaagactaggaga 19540532  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    ||||||||||| |||||| |||||  |||||| | |||||||||| ||| ||  ||| |||||||||| |||||  ||| |||||||||||||||||||     
T  19540531 gtgaagcaacggctatttcgaaaggttttgaaggtattggatgcttgtt-ctttaaagagcgttgacatagtacaattgtacgaagtgtacaaccactat 19540433  T
Q  218 ctcc 221  Q
    ||||    
T  19540432 ctcc 19540429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 221
Target Start/End: Original strand, 22187973 - 22188189
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    |||||||||  || |||| |||||| || ||||||||| |  ||||||  ||||| |||||||| ||| || |||||||| || |||||||||  |||||    
T  22187973 atcagaagctgaagatcaccagaagttgaagttcatcaggacatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtctaagtattgc 22188072  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| |||| || ||||||||||| |||||||||||   ||||||| |||||||||||| ||| ||   || |||||| ||||||||   ||| ||||||    
T  22188073 agaagactgaaagagtgaagcaacaactattttgaatagatttgaaggcattggatgcttgtt-ctttgaagagcgttaacaaagtataattgtacgaag 22188171  T
Q  204 tgtacaaccactacctcc 221  Q
    ||||||||||||| ||||    
T  22188172 tgtacaaccactatctcc 22188189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 22785551 - 22785672
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| |||||||| |||||||||| | |||||||||||| |||||||||||||||| | |  ||||| |||| ||||| ||||||||| |||||||| |    
T  22785551 aatcaccagaagctacagttcatcaggagatgcaacttaaagcttcaaaagctatttcaagatttcaaactcgcctaaa-attgcagaaaactggaaatg 22785649  T
Q  119 tgaagcaacgactattttgaaag 141  Q
    |  ||||||||||||||||||||    
T  22785650 tatagcaacgactattttgaaag 22785672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 221
Target Start/End: Original strand, 22776186 - 22776375
Alignment:
Q  21 tcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtg 120  Q
    ||||||||||||| ||||||||| | |||||||||||| |||||||||| | ||| | || ||||  |||| ||||| |||||| || ||| |||||||     
T  22776186 tcatcagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggtttcagactcgcctaaa-attgcaaaagacttgaaaagta 22776284  T
Q  121 aagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctc 220  Q
     ||||||| ||||||||||||         ||||||||||||  ||| || ||| |||||||||| |||||||||| ||||||||||||||||||| |||    
T  22776285 tagcaacggctattttgaaag---------gcattggatgcttattcttc-aaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 22776374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 221
Target Start/End: Original strand, 22781564 - 22781753
Alignment:
Q  21 tcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtg 120  Q
    ||||||||||||| ||||||||| | |||||||||||| |||||||||| | ||| | || ||||  |||| ||||| |||||| || ||| |||||||     
T  22781564 tcatcagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggtttcagactcgcctaaa-attgcaaaagacttgaaaagta 22781662  T
Q  121 aagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctc 220  Q
     ||||||| ||||||||||||         ||||||||||||  ||| || ||| |||||||||| |||||||||| ||||||||||||||||||| |||    
T  22781663 tagcaacggctattttgaaag---------gcattggatgcttattcttc-aaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatctc 22781752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 221
Target Start/End: Original strand, 21537139 - 21537335
Alignment:
Q  26 agaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaag 123  Q
    ||||| || ||||||||| | |||||||  ||||| |||||||| | | || |||||||| || ||||| |||| ||||||||| ||  ||| |||||||    
T  21537139 agaagatgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtttaaacattgcagaagaccagaagagtgaag 21537238  T
Q  124 caacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||||  |||| | |||||||||||| | |  |   || ||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  21537239 caacgactattttgaaaggttttggaggcattggatgcttgct-ttttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctcc 21537335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 99 - 221
Target Start/End: Complemental strand, 24576169 - 24576048
Alignment:
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| |||| || ||||||| || | |||| |   || || |||||||||||||  ||| |    
T  24576169 attgcagaagactggaaaagtgaagcaacaactattttgaaaggatttaaaggcattggttgtttgttcgt-tgaagagagttgacaaagtacaattgta 24576071  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||||    
T  24576070 cgaagtgtacaaccactacctcc 24576048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 31967939 - 31968130
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| |||||||||||||||||||   |||||||||||| || ||||||| | ||| | |||||||| ||||  |||| ||||||||| ||||||||||    
T  31967939 aatcaccagaagctgcagttcatcagaagatgcaacttaaagcctcaaaagttgtttcaaggattcaaactcgcataaa-attgcagaagactggaaaag 31968037  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    |  |||||| ||||||||||         || ||||||||||||  ||| || ||| |||||||||| | |||||||| ||||||||||||||||||| |    
T  31968038 tatagcaacaactattttga---------aatgcattggatgcttattcttc-aaagagcgttgacataatacgtttgtacgaagtgtacaaccactatc 31968127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 76 - 221
Target Start/End: Complemental strand, 30621373 - 30621229
Alignment:
Q  76 aatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaa 175  Q
    |||||||| || ||||| |||  ||||||||| ||||||| ||||||||| ||||||||||||||| ||||||| |||||||||| | | | ||   ||     
T  30621373 aatggatttaatctcgtgtaagcattgcagaagactggaagagtgaagcagcgactattttgaaaggatttgaaggcattggatgtttgat-ctttgaag 30621275  T
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||  ||| |||||||||| |||||||| ||||    
T  30621274 agcgttgacaaagtacaattgtacgaagtgtaaaaccactatctcc 30621229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 76 - 221
Target Start/End: Complemental strand, 30623994 - 30623850
Alignment:
Q  76 aatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaa 175  Q
    |||||||| || ||||| |||  ||||||||| ||||||| ||||||||| ||||||||||||||| ||||||| |||||||||| | | | ||   ||     
T  30623994 aatggatttaatctcgtgtaagcattgcagaagactggaagagtgaagcagcgactattttgaaaggatttgaaggcattggatgtttgat-ctttgaag 30623896  T
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||  ||| |||||||||| |||||||| ||||    
T  30623895 agcgttgacaaagtacaattgtacgaagtgtaaaaccactatctcc 30623850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 24377335 - 24377114
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctattt-aatggattcaacctcgtctaaa 97  Q
    |||| ||||||||| ||| |||| ||||||||| ||||||||| | |||||||  ||||| |||||||||| |  || |||||||| || | || |||      
T  24377335 agttcatcagaagctaaagatcaccagaagctgaagttcatcaagagatgcaagacttaaagcttcaaaaggttgttcaatggatttaatcacgcctagc 24377236  T
Q  98 gattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttga 197  Q
     ||||||||| ||  ||| |||||||||||||||||||||||||  |||||  |||||||||||| ||| ||   || |||||||||| |||||  |||     
T  24377235 -attgcagaagaccagaagagtgaagcaacgactattttgaaaggttttgagagcattggatgcttgtt-ctttgaagagcgttgacatagtacaattgt 24377138  T
Q  198 acgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||||| ||||    
T  24377137 acgaagtgtacaaccactatctcc 24377114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 35 - 162
Target Start/End: Original strand, 9015270 - 9015399
Alignment:
Q  35 agttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgacta 132  Q
    ||||||||| | |||||||  ||||| |||||||| | | || |||||||| || || ||||||  ||||||||| ||||||| |||||| |||| ||||    
T  9015270 agttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatcttgtctaagcattgcagaagactggaagagtgaaacaacaacta 9015369  T
Q  133 ttttgaaagaatttgaacgcattggatgct 162  Q
    ||||||||| ||||||| ||||||||||||    
T  9015370 ttttgaaaggatttgaaagcattggatgct 9015399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 10009634 - 10009837
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactg-gaaa 116  Q
    |||| ||||||||| ||||||||| | |||||||  ||||| |||||||  ||| || ||||||||||| |||||| ||  |||||| || ||   ||      
T  10009634 atcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaagggctgttcaatggattcaatctcgtccaagcattgcaaaagaccaagagg 10009733  T
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||||| |||| |  || || |||||||| |||||  ||| ||||| |||||||||||||    
T  10009734 agtgaagcaacaactattttgaaaggatttgaaagcattggatgcttgttctttgaagaa-cgttgacatagtacaattgtacgaaatgtacaaccacta 10009832  T
Q  217 cctcc 221  Q
     ||||    
T  10009833 tctcc 10009837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 221
Target Start/End: Complemental strand, 40782634 - 40782490
Alignment:
Q  76 aatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaa 175  Q
    ||||||||||| |||||| ||  |||||| || ||  ||  ||||||||||||||||||||||||| ||||||| |||||||||| | ||| ||   ||     
T  40782634 aatggattcaatctcgtccaagcattgcaaaagaccagaggagtgaagcaacgactattttgaaaggatttgaaagcattggatgtttgtt-ctttgaag 40782536  T
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||| |||||  ||| ||||||||||||||||||| ||||    
T  40782535 agcgttgacatagtacaattgtacgaagtgtacaaccactatctcc 40782490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 217
Target Start/End: Original strand, 24850536 - 24850749
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctattt-aatggattcaacctcgtctaaagattg 102  Q
    ||||||||| ||| |||| |||| |||| ||| ||||| | |||||||  ||||| |||||||||| |  || |||||||| || ||||||||   ||||    
T  24850536 atcagaagctaaagatcaccagatgctgaagtacatcaggagatgcaagacttaaagcttcaaaaggttgttcaatggatttaatctcgtctacgcattg 24850635  T
Q  103 cagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaa 202  Q
    | ||| ||  ||| ||||||||||||| ||||||||||| |||| || |||||||||||| ||| ||   || ||||||||||||||||   || |||||    
T  24850636 ctgaagaccagaagagtgaagcaacgaatattttgaaaggatttcaaagcattggatgcttgtt-ctttgaagagcgttgacaaagtacaagtgtacgaa 24850734  T
Q  203 gtgtacaaccactac 217  Q
     ||||||||||||||    
T  24850735 atgtacaaccactac 24850749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 40332292 - 40332100
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaat-ggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    ||||| ||||||||||||||||||| | |||| |||  || ||||  ||||||  ||  | |||||||| |||| ||||| ||||||||| |||||||||    
T  40332292 aatcaccagaagctgcagttcatcaggagatgtaacccaaagctttcaaagctgctttctaggattcaaactcgcctaaa-attgcagaagactggaaaa 40332194  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    ||  ||||||| ||||||||||||         ||||||||||||  ||| ||||| | ||||||||| |||||||||| |||||||||||||||||||     
T  40332193 gtatagcaacggctattttgaaag---------gcattggatgcttattcttcaaaga-gcgttgacatagtacgtttgtacgaagtgtacaaccactaa 40332104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 22260586 - 22260472
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| || ||||||| | || |||||||| || |||||||||  ||||||||| ||||||||||||||||||| | ||||||| ||| ||||||| |     
T  22260586 acttaaagcgtcaaaagttgttcaatggatttaatctcgtctaagcattgcagaagactggaaaagtgaagcaacaaatattttggaaggatttgaagga 22260487  T
Q  153 attggatgctagttc 167  Q
    | |||||||| ||||    
T  22260486 actggatgcttgttc 22260472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 26 - 221
Target Start/End: Complemental strand, 3277228 - 3277043
Alignment:
Q  26 agaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagca 125  Q
    |||||||| ||||||| | | |||| ||||||| |||||||||| | ||||| | |||||| || |||| |||||||||||| |||| ||||||  | ||    
T  3277228 agaagctggagttcattaggagatggaacttaaagcttcaaaagttgtttaaagaattcaaacttgtctgaagattgcagaagactgaaaaagtataaca 3277129  T
Q  126 acgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||| ||| ||||         ||| ||||||||||||  ||| || ||| |||||||| | |||||||||| ||||||||||||||||||| ||||    
T  3277128 acggctaatttg---------gaaggcattggatgcttattcttc-aaagagcgttgatatagtacgtttgtacgaagtgtacaaccactatctcc 3277043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 23595535 - 23595654
Alignment:
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||  ||| |||||||||||||||| ||  || ||||||||| ||||||||| || |||| ||  ||  |||||||||||||||  ||| |    
T  23595535 attgcagaagaccagaagagtgaagcaacgactaattcaaatgaatttgaaggcattggattcttgttc-tctgaa--gcgttgacaaagtacaattgta 23595631  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    ||||||||| |||||||||||||    
T  23595632 cgaagtgtagaaccactacctcc 23595654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 14581597 - 14581528
Alignment:
Q  151 gcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||||  ||| ||||| | ||||||||| |||||||||| ||||||||||||||||||| ||||    
T  14581597 gcattggatgcttattcttcaaaga-gcgttgacatagtacgtttgtacgaagtgtacaaccactatctcc 14581528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 39037684 - 39037729
Alignment:
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||  ||| ||||||||||||||||||||||||    
T  39037684 agcgttgacaaagtacaattgtacgaagtgtacaaccactacctcc 39037729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 22455029 - 22455077
Alignment:
Q  173 aaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||  ||| |||||||||||||||| |||||||    
T  22455029 aaaagcgttgacaaagtacaattgtacgaagtgtacaaccagtacctcc 22455077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 160
Target Start/End: Complemental strand, 24779459 - 24779416
Alignment:
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatg 160  Q
    ||||||||||||||||||||||||| ||||||| |||| |||||    
T  24779459 agtgaagcaacgactattttgaaaggatttgaaagcatcggatg 24779416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 26619067 - 26619130
Alignment:
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgct 162  Q
    ||||||||| ||||||| | ||||||||| |||||||  |||||||||||| |||||| |||||    
T  26619067 attgcagaagactggaagaatgaagcaacaactatttcaaaagaatttgaaggcattgaatgct 26619130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 23184345 - 23184391
Alignment:
Q  175 aagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||  ||| |||||||||| |||||||||||||    
T  23184345 aagcgttgacaaagtacaattgtacgaagtgtagaaccactacctcc 23184391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 28140603 - 28140653
Alignment:
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttc 167  Q
    ||||||||||| ||||||||||||| |||||||  ||||||||||| ||||    
T  28140603 agtgaagcaacaactattttgaaaggatttgaaaacattggatgcttgttc 28140653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 25189456 - 25189411
Alignment:
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||  ||| ||||| ||||||||||||||||||    
T  25189456 agcgttgacaaagtacaattgtacgaaatgtacaaccactacctcc 25189411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 142; Significance: 1e-74; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 14086440 - 14086661
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatgg-attcaacctcgtctaaaga 99  Q
    ||||||||| |||| |||||| | |||||||||||||||||||  |||||||||||||||||||||||||| |||||||| |||||||||||||||| ||    
T  14086440 agtttatcaaaagctaaaaattaccagaagctgcagttcatcagaggatgcaacttaaggcttcaaaagctgtttaatgggattcaacctcgtctaagga 14086539  T
Q  100 ttgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaac 199  Q
    |||||||| |||||||||||||||||||| ||||||||||   ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  14086540 ttgcagaagactggaaaagtgaagcaacggctattttgaagtgatttgaatgcattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgtac 14086639  T
Q  200 gaagtgtacaaccactacctcc 221  Q
    ||||||||||||| ||||||||    
T  14086640 gaagtgtacaaccgctacctcc 14086661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 42243897 - 42243695
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| ||||||||| ||||||||| | |||||||||||| |||||||||||| ||||| |||||||| |||||||||| ||||||||| ||||||||||    
T  42243897 aatcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaaaattgcagaagactggaaaag 42243798  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    ||||||||| ||||||||||||| |||||||  |||| |||| | |||||| |||| |||||||||||| |||||||| |||||||||||||||||||||    
T  42243797 tgaagcaacaactattttgaaaggatttgaagacatttgatgtttgttccttaaaagagcgttgacaaaatacgtttgtacgaagtgtacaaccactacc 42243698  T
Q  219 tcc 221  Q
    |||    
T  42243697 tcc 42243695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 33933505 - 33933282
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaa--gctatttaatgg-attcaacctcgtctaaa 97  Q
    ||||||||||||||  | ||||| || ||| ||||||||||||  ||||||||||||| |||||||||  | | |||||||| ||||||||||||||||     
T  33933505 agtttatcagaagctgagaatcaccataagttgcagttcatcagaggatgcaacttaaagcttcaaaaaagttgtttaatgggattcaacctcgtctaag 33933406  T
Q  98 gattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttga 197  Q
    ||||||| || ||||||||||||||||||| ||||||||||||| |||| ||||||||||||||| ||||||||||| |||||||| | ||||||||||     
T  33933405 gattgcaaaagactggaaaagtgaagcaacaactattttgaaaggatttaaacgcattggatgcttgttcctcaaaagagcgttgatatagtacgtttgt 33933306  T
Q  198 acgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||||||||||    
T  33933305 acgaagtgtacaaccactacctcc 33933282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 26 - 221
Target Start/End: Complemental strand, 30743189 - 30742995
Alignment:
Q  26 agaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagca 125  Q
    ||||| |||||||||||| | |||||||||||| |||||||||| | |||||||||||||| |||||||||||||||||||| |||||||| |  |||||    
T  30743189 agaagttgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttaatggattcaaactcgtctaaagattgcagaagactggaaaggcaaagca 30743090  T
Q  126 acgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||| ||||||||||| ||||||| |||||||||| |  ||| || ||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  30743089 acgattattttgaaaggatttgaaggcattggatgtttattcttc-aaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctcc 30742995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 4887238 - 4887037
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| ||||||||||||||||||| |  ||||||||||| |||||||||| | || |||||||| || || |||| ||||||||| || ||||||||||    
T  4887238 aatcaccagaagctgcagttcatcaagatatgcaacttaaagcttcaaaagttgttcaatggatttaaacttgtcttaagattgcaaaagactggaaaag 4887139  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    |  |||||||||||||||||||  ||||||| |||||||||||| |||| || ||| |||||||||||||||||| || |||||||||||||||||||||    
T  4887138 tatagcaacgactattttgaaaagatttgaaggcattggatgcttgttcttc-aaagagcgttgacaaagtacgtgtgtacgaagtgtacaaccactacc 4887040  T
Q  219 tcc 221  Q
    |||    
T  4887039 tcc 4887037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 11994122 - 11993907
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||    ||||| ||||||||| ||||||||| | |||||||||||| | |||||||| | || || |||||||| ||||||||| |||    
T  11994122 agtttatcagaagctgtgaatcaccagaagctgtagttcatcaggagatgcaacttaaagtttcaaaagatgttcaacggattcaaactcgtctaaggat 11994023  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| ||||||| |||||||||||| ||| |||||| | ||||||| |||||||||||| |||| || ||| |||||||||||||||||| || |||    
T  11994022 tgcagaagactggaatagtgaagcaacggctaatttgaagggatttgaaagcattggatgcttgttcttc-aaagagcgttgacaaagtacgtatgtacg 11993924  T
Q  201 aagtgtacaaccactac 217  Q
    |||||||||||||||||    
T  11993923 aagtgtacaaccactac 11993907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 33022898 - 33022679
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||| |||||||||  ||||||| |||||  |||||||||||| | |||||||| ||| |||||||| ||| || |||||||| || ||| |||||  ||    
T  33022898 agttcatcagaagctgaaaatcaccagaatttgcagttcatcaggagatgcaacataaagcttcaaaggctgttcaatggatttaatctcatctaagcat 33022799  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| |||||||||||||||||||||||| |||||||| ||||||| |||||||||| | |||| || ||| ||||||||||||||||  ||| |||    
T  33022798 tgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcattggatgtttgttcttc-aaagagcgttgacaaagtacaattgtacg 33022700  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  33022699 aagtgtacaaccactacctcc 33022679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 21 - 217
Target Start/End: Complemental strand, 31118092 - 31117896
Alignment:
Q  21 tcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagcta-tttaatggattcaacctcgtctaaagattgcagaatactggaaaagt 119  Q
    ||||||||||||||||||||||| | |||||||| ||| |||||||||| |  ||||| ||||| || |||||||||  ||||||||| |||||||||||    
T  31118092 tcatcagaagctgcagttcatcaggagatgcaacataaagcttcaaaaggttgtttaacggatttaaactcgtctaagcattgcagaagactggaaaagt 31117993  T
Q  120 gaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    ||||||||||||| |||||||||||||||| |||||||||||| |||| || ||| || |||||||||||||   || |||||||||||| |||||||    
T  31117992 gaagcaacgactaatttgaaagaatttgaaggcattggatgcttgttcttc-aaagagtgttgacaaagtacaaatgtacgaagtgtacatccactac 31117896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 3245363 - 3245563
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| ||||||||||||||||||| | |||||||||||| ||||| ||| || ||| | |||||||| ||||||| |||||||||||| ||||||||||    
T  3245363 aatcaccagaagctgcagttcatcaggagatgcaacttaaagcttccaaaactgtttcaaggattcaaactcgtct-aagattgcagaagactggaaaag 3245461  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    |  ||||||| ||||||||||||||||  || ||||| ||||||  ||| || ||| |||||||||| |||||||||| ||||||||||||||||||| |    
T  3245462 tatagcaacggctattttgaaagaattgaaaggcatttgatgcttattcttc-aaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatc 3245560  T
Q  219 tcc 221  Q
    |||    
T  3245561 tcc 3245563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 26759381 - 26759164
Alignment:
Q  3 tttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattg 102  Q
    ||||||||||||  | ||||| |||||| || ||||||||| | |||||||||||| |||||||||| | ||||| ||||||||  ||| ||||||||||    
T  26759381 tttatcagaagctgagaatcaccagaagttgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaacggattcaaattcgcctaaagattg 26759282  T
Q  103 cagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaa 202  Q
    ||||| |||||||||||  | |||||||||||||| ||| ||||||| ||||||||||||  ||| || ||| |||| ||| | |||| ||||| |||||    
T  26759281 cagaagactggaaaagtataacaacgactattttggaaggatttgaaggcattggatgcttattcttc-aaagagcgctgaaatagtaagtttgtacgaa 26759183  T
Q  203 gtgtacaaccactacctcc 221  Q
    |||||||||||||||||||    
T  26759182 gtgtacaaccactacctcc 26759164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 15517203 - 15516984
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||||||||||||   | ||||| |||||| || |||||||||   |||||||||||| |||||||||| | || || |||||||| |||||||||||||    
T  15517203 agtttatcagaagttgagaatcaccagaagttgtagttcatcagaagatgcaacttaaagcttcaaaagttgttcaacggattcaaactcgtctaaagat 15517104  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| |||||||||||  ||||||| |||||||| ||| ||||||| ||||||||||||  ||| || ||| || |||| || ||||| |||| |||    
T  15517103 tgcagaagactggaaaagtatagcaacggctattttggaaggatttgaaggcattggatgcttattcttc-aaagagtgttggcatagtacttttgtacg 15517005  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  15517004 aagtgtacaaccactacctcc 15516984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 41566335 - 41566556
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaag 98  Q
    |||| |||||||||  || ||||||||||| || ||||||||| | |||||||  ||||| ||||||||||||||| |||||||| || |||||||||      
T  41566335 agttcatcagaagctgaagatcatcagaagttgtagttcatcaggagatgcaagacttaaagcttcaaaagctattcaatggatttaatctcgtctaagc 41566434  T
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||| |||||||||||||||| |||||||||||| ||||||| |||||||||| |  || ||   || |||||||| | |||||  ||| |    
T  41566435 attgcagaagactagaaaagtgaagcaacgtctattttgaaaggatttgaaggcattggatgtttatt-ctttgaagagcgttgatatagtacaattgta 41566533  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||| ||||    
T  41566534 cgaagtgtacaaccactatctcc 41566556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 29138311 - 29138528
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||  | ||||| |||||| || ||||||||| | |||||||||||| | |||||||||| |||||  |||||||  |||||| |||||    
T  29138311 agtttatcagaagctgagaatcaccagaagttgtagttcatcaggagatgcaacttaaagtttcaaaagctgtttaacagattcaaaatcgtct-aagat 29138409  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| ||||| |||||  |||||| ||||||||| ||| ||| ||| ||||||||||||  ||| || ||| ||||||| || |||||||||| |||    
T  29138410 tgcagaagactgg-aaagtatagcaacaactattttggaaggattagaaggcattggatgcttattcttc-aaagagcgttgtcatagtacgtttgtacg 29138507  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||| ||||    
T  29138508 aagtgtacaaccactatctcc 29138528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 5430118 - 5429991
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaat-ggattcaacctcgtctaaaga 99  Q
    |||| ||||||||  |||||||| ||||||||||||||||||| | ||||||||||||||||||||||||| ||| || |||||||||||||| ||| ||    
T  5430118 agttcatcagaaggtaaaaatcaccagaagctgcagttcatcaggagatgcaacttaaggcttcaaaagctgttttatgggattcaacctcgtttaagga 5430019  T
Q  100 ttgcagaatactggaaaagtgaagcaac 127  Q
    |||||||| |||| ||||||||||||||    
T  5430018 ttgcagaagactgaaaaagtgaagcaac 5429991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 221
Target Start/End: Complemental strand, 20551111 - 20550910
Alignment:
Q  21 tcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctattt-aatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    ||||||||||||| ||||||||| | |||||||  ||||| |||||||||| |  || ||||| || || |||||||||  ||||||||| ||| ||| |    
T  20551111 tcatcagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaaggttgttcaatggttttaatctcgtctaagcattgcagaaaactagaaga 20551012  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    |||||||||||||||||||||||  ||||||| |||||||||||| ||| ||  ||| |||||||||||| |||  ||| ||||||||||||||||||||    
T  20551011 gtgaagcaacgactattttgaaaagatttgaaggcattggatgcttgtt-ctttaaagagcgttgacaaa-tacaattgtacgaagtgtacaaccactac 20550914  T
Q  218 ctcc 221  Q
    ||||    
T  20550913 ctcc 20550910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 89342 - 89544
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| |||||| || ||||||||| | |||||||  ||||| |||||||||| | || |||||||| || |||||||||  ||||||||| ||  ||| |    
T  89342 atcaccagaagttgtagttcatcaggagatgcaaaacttaaagcttcaaaagttgttcaatggatttaatctcgtctaagaattgcagaagaccagaaga 89441  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    |||||||||||||||||||||||||||||||| |||||| ||||| |||| |  || | || |||||| |||||  ||| |||||||||||||||||||     
T  89442 gtgaagcaacgactattttgaaagaatttgaaagcattgcatgcttgttctttgaaga-gcattgacatagtacaattgtacgaagtgtacaaccactat 89540  T
Q  218 ctcc 221  Q
    ||||    
T  89541 ctcc 89544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 17815150 - 17814983
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| ||| || |||||||| || |||||||||  ||||||||| ||||||| |||||||||||||||||| |||||| ||||||| ||    
T  17815150 acttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattctgaaaggatttgaaagc 17815051  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||| |||||| ||| ||   || ||||||||||||||||  ||| ||| ||||||||||||||| ||||    
T  17815050 attagatgcttgtt-ctttgaagagcgttgacaaagtacaattgtacggagtgtacaaccactatctcc 17814983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 21910773 - 21910571
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| ||||||||  ||||||||| | |||||||  ||||| || ||||| ||| || ||| |||| || |||||||||  ||| || || |||||||||    
T  21910773 atcaccagaagctaaagttcatcaggagatgcaagacttaaagcgtcaaaggctgttgaattgatttaatctcgtctaagcattacaaaagactggaaaa 21910674  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||| ||| ||   || ||||||||||||||||  ||| |||||||||||||||||||     
T  21910673 gtgaagcaacgattattttgaaaggatttgaaggcattggatgcttgtt-ctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactat 21910575  T
Q  218 ctcc 221  Q
    ||||    
T  21910574 ctcc 21910571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 28464252 - 28464456
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||    ||||| ||||||||||||||||||| | ||| |||||||| |||||||||||| ||| | |||||||| ||||||| |||||    
T  28464252 agtttatcagaagctgtgaatcaccagaagctgcagttcatcaggagatacaacttaaagcttcaaaagctgtttcaaggattcaaactcgtct-aagat 28464350  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| |||  ||||||  | ||||| ||||||||||||         ||||||||||||  ||| || ||| |||||||||| |||||||||| |||    
T  28464351 tgcagaagactaaaaaagtataacaacggctattttgaaag---------gcattggatgcttattcttc-aaagagcgttgacatagtacgtttgtacg 28464440  T
Q  201 aagtgtacaaccacta 216  Q
    ||||||||||||||||    
T  28464441 aagtgtacaaccacta 28464456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 7745694 - 7745815
Alignment:
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    |||| |||| ||| ||| ||||||||||| ||||||||||||| ||||||| |||||||||||| |||| || ||| ||||||||||||||||  ||| |    
T  7745694 attggagaagactagaagagtgaagcaacaactattttgaaaggatttgaaggcattggatgcttgttcttc-aaagagcgttgacaaagtacaattgta 7745792  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||||    
T  7745793 cgaagtgtacaaccactacctcc 7745815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 9089175 - 9088984
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| ||||||||||||||||||| | |||||||||||| | |||||||||| ||||| ||| |||| ||||||| | ||||| |||| ||||||||||    
T  9089175 aatcaccagaagctgcagttcatcaggagatgcaacttaaagtttcaaaagctgtttaaaggaatcaaactcgtct-atgattgaagaagactggaaaag 9089077  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    |    ||||||||||||||         ||| ||||||||||||| ||| || ||| |||||||||| |||||||||| ||||||||||||||||||| |    
T  9089076 tattacaacgactattttg---------gaaggcattggatgctaattcttc-aaagagcgttgacatagtacgtttgtacgaagtgtacaaccactatc 9088987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 60 - 221
Target Start/End: Complemental strand, 26765672 - 26765513
Alignment:
Q  60 gcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggat 159  Q
    |||||||||||| ||||| | ||||||  ||| ||||||||||||||| |||||||||||  |||||| ||||||||| ||| ||||||| |||||||||    
T  26765672 gcttcaaaagctgtttaacg-attcaaattcgcctaaagattgcagaagactggaaaagtatagcaacaactattttggaaggatttgaaggcattggat 26765574  T
Q  160 gctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||  ||| || ||| |||| ||| | |||||||||| |||||||||||||||||| |||||    
T  26765573 gcttattcttc-aaagagcgctgaaatagtacgtttgtacgaagtgtacaaccactgcctcc 26765513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 25930086 - 25930186
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| ||||||||||| ||||||| | |||||||||||| |||||||||| | ||||| |||||||| ||||||||||||||||| || ||||||||||    
T  25930086 aatcaccagaagctgcaattcatcaggagatgcaacttaaagcttcaaaagttgtttaaaggattcaaactcgtctaaagattgcataagactggaaaag 25930185  T
Q  119 t 119  Q
    |    
T  25930186 t 25930186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 10848979 - 10848880
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagt 119  Q
    |||| ||||||||||||||||||||| |||||||||||| |||||||||| | ||| | |||||||| |||| ||||| ||||||||| |||||||||||    
T  10848979 atcaccagaagctgcagttcatcatgagatgcaacttaaagcttcaaaagttgtttcaaggattcaaactcgcctaaaaattgcagaaaactggaaaagt 10848880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 23412894 - 23413096
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| ||||||||| ||||||||| | |||||||  ||||| |||||||| | | || |||||||| || ||| || ||  ||||||||| ||  ||| |    
T  23412894 atcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcatccaagcattgcagaagaccagaaga 23412993  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||| |||  |   || |||||||||| |||||  ||| |||||||||||||||||||     
T  23412994 gtgaagcaacgattattttgaaaggatttgaaagcattggatgcttgtt-ttttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactat 23413092  T
Q  218 ctcc 221  Q
    ||||    
T  23413093 ctcc 23413096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 216
Target Start/End: Original strand, 6512357 - 6512545
Alignment:
Q  26 agaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaag 123  Q
    ||||| || ||||||||| | |||||||  ||||| |||||||| | | || | |||||| || |||||||||  ||||| ||| ||||||| |||||||    
T  6512357 agaagttgtagttcatcaggagatgcaagacttaaagcttcaaaggttgttcagtggatttaatctcgtctaagcattgctgaagactggaagagtgaag 6512456  T
Q  124 caacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    |||||||||||||||||| ||||||| ||||||   ||| ||| ||   || ||||||||||||||||  ||| |||||||||||||||||||    
T  6512457 caacgactattttgaaaggatttgaaggcattg---gcttgtt-ctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 6512545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 117 - 221
Target Start/End: Original strand, 13545531 - 13545634
Alignment:
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    ||||||||||| |||| |||||||| ||||||| |||||||||||| |||| || ||| ||||||||||||||||   || ||||||||||||||||| |    
T  13545531 agtgaagcaacaactactttgaaaggatttgaaggcattggatgcttgttcttc-aaagagcgttgacaaagtacaagtgtacgaagtgtacaaccacca 13545629  T
Q  217 cctcc 221  Q
    |||||    
T  13545630 cctcc 13545634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 21072241 - 21072357
Alignment:
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||  ||| ||||||||||| ||||||||||||| ||||||| |||||||||||| ||| ||   || |||||||||| |||||  ||| |    
T  21072241 attgcagaagaccagaagagtgaagcaacaactattttgaaaggatttgaaagcattggatgcttgtt-ctttgaagagcgttgacatagtacaattgta 21072339  T
Q  199 cgaagtgtacaaccacta 216  Q
    ||||||||||||||||||    
T  21072340 cgaagtgtacaaccacta 21072357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 26784590 - 26784369
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaac--ttaaggcttcaaaagctatttaatggattcaacctcgtctaaag 98  Q
    |||| |||||||||  || |||| ||||||||| |||||| || | |||||||   |||| |||| ||| ||| || ||||||||||| |||||| ||      
T  26784590 agttcatcagaagctgaagatcaccagaagctgtagttcagcaggagatgcaagatttaaagctttaaaggctgttcaatggattcaatctcgtccaagc 26784491  T
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    |||||| || ||  ||  ||||||||||||||||||||||||| ||||| | | | ||||||||  || ||   || |||||||||| |||||  ||| |    
T  26784490 attgcaaaagaccagagcagtgaagcaacgactattttgaaaggatttggaagaactggatgcttatt-ctttgaagagcgttgacatagtacaattgta 26784392  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||||    
T  26784391 cgaagtgtacaaccactacctcc 26784369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 32160982 - 32160781
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaa-agctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    |||| ||||| ||| |||||||||   |||||||| ||| | |||||| || | |||||||||||||| ||||||||||||  ||  || |||| |  |     
T  32160982 atcaccagaaactgtagttcatcagaagatgcaacctaaagtttcaaatagttgtttaatggattcaaactcgtctaaagaaagcgaaagactgaagtat 32160883  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
     | ||||||  ||| |||||||| ||||||| ||||||||||||  | | ||||| | |||||||||||| |||| || ||||||||||| |||||||||    
T  32160882 agtagcaacagctaatttgaaaggatttgaaggcattggatgcttatccttcaaaga-gcgttgacaaagaacgtatgtacgaagtgtacgaccactacc 32160784  T
Q  219 tcc 221  Q
    |||    
T  32160783 tcc 32160781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 221
Target Start/End: Complemental strand, 28139738 - 28139622
Alignment:
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| |||| ||||||  |||||||||||||||||||| |||  ||  |||||||||||  ||| ||| | | ||||||||| |||| ||||| ||||||    
T  28139738 agaagactgaaaaagtatagcaacgactattttgaaaggattgaaagacattggatgcttattcttcataga-gcgttgacatagtatgtttgtacgaag 28139640  T
Q  204 tgtacaaccactacctcc 221  Q
    ||||||||||||| ||||    
T  28139639 tgtacaaccactatctcc 28139622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 35986162 - 35986282
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| |||||| |||||||||||| | |||  ||||||| | |||||||| | ||| | ||| || | |||| ||||| ||||||||| ||||||||||    
T  35986162 aatcaccagaagttgcagttcatcaggagattgaacttaaagtttcaaaagatgtttcaaggactctaactcgcctaaa-attgcagaagactggaaaag 35986260  T
Q  119 tgaagcaacgactattttgaaa 140  Q
    ||  ||||||||||||||||||    
T  35986261 tgtggcaacgactattttgaaa 35986282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 30115797 - 30115847
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaag 69  Q
    ||||| ||||||||||||||||||| | |||||||||||| ||||||||||    
T  30115797 aatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaag 30115847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 217
Target Start/End: Original strand, 35932016 - 35932124
Alignment:
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| |||||||||||   ||||||||||||||||||         |||||||||||||  ||| ||||| | | ||||||| |||||||||| |    
T  35932016 attgcagaagactggaaaagtatggcaacgactattttgaaa---------cgcattggatgcttattcttcaaaga-gtgttgacatagtacgtttgta 35932105  T
Q  199 cgaagtgtacaaccactac 217  Q
    |||||||||||||||||||    
T  35932106 cgaagtgtacaaccactac 35932124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 221
Target Start/End: Original strand, 30115863 - 30115959
Alignment:
Q  124 caacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||| |||  |  ||||| ||||||  ||| ||||| | ||||||||| |||||||||| ||||| ||||||||||||| ||||    
T  30115863 caacgactattttgaaaggattgaagggcatttgatgcttattcttcaaaga-gcgttgacatagtacgtttgtacgaaatgtacaaccactatctcc 30115959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 21199046 - 21199125
Alignment:
Q  141 gaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||| |||||||||||| ||| ||    ||||||||||||||||||  ||| ||||||||||||| ||||||||||    
T  21199046 gaatttgaaggcattggatgctcgtt-ctttggaaagcgttgacaaagtacaattgtacgaagtgtacaatcactacctcc 21199125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 642784 - 642829
Alignment:
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  642784 agcgttgacaaagtacaattgtacgaagtgtacaaccactatctcc 642829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 6499299 - 6499254
Alignment:
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  6499299 agcgttgacaaagtacaattgtacgaagtgtacaaccactatctcc 6499254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 12352872 - 12352917
Alignment:
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  12352872 agcgttgacaaagtacaattgtacgaagtgtacaaccactatctcc 12352917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 25930233 - 25930273
Alignment:
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    |||||||||| |||||||||| ||||| |||||||||||||    
T  25930233 agcgttgacatagtacgtttgtacgaattgtacaaccacta 25930273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 215370 - 215589
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||| ||||||| |||||||||||||| |||| | ||||||||||||  ||||||||||| |||||||||||||| |||||||||||||    
T  215370 agtttatcagaagccgaaaatcaccagaagctgcagtttatcaggagatgcaacttaaaacttcaaaagctgtttaatggattcaaactcgtctaaagat 215469  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| ||| |||||||||||||||| |||||||||||| ||||||| |||||||||||| |||| || ||| ||||||||||||||||||||| |||    
T  215470 tgcagaagactagaaaagtgaagcaacggctattttgaaaggatttgaaggcattggatgcttgttcttc-aaagagcgttgacaaagtacgtttgtacg 215568  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  215569 aagtgtacaaccactacctcc 215589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 134; Significance: 6e-70; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 4 - 221
Target Start/End: Original strand, 19832946 - 19833163
Alignment:
Q  4 ttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    |||||||||||  | ||||| |||||| || ||||||||| | |||||||||||| |||| ||||||| ||||| |||||||| ||| ||||||||||||    
T  19832946 ttatcagaagctgagaatcaccagaagatgtagttcatcaggagatgcaacttaaagctttaaaagctgtttaacggattcaaactcatctaaagattgc 19833045  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||| |||||||||| ||||||    
T  19833046 agaagactggaaaagtgaagcaacgactattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacatagtacgtttgtacgaag 19833145  T
Q  204 tgtacaaccactacctcc 221  Q
    ||||||| ||||||||||    
T  19833146 tgtacaagcactacctcc 19833163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 20487828 - 20488048
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatgga-ttcaacctcgtctaaaga 99  Q
    |||||||||||||| ||||||||  ||||| ||||||||||||  |||||||||||||||||||||||| | ||||||||  ||||||||||||||||||    
T  20487828 agtttatcagaagctaaaaatcactagaagttgcagttcatcagaggatgcaacttaaggcttcaaaagttgtttaatggggttcaacctcgtctaaaga 20487927  T
Q  100 ttgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaac 199  Q
    |||||||| |||| ||||||||||||||| |||||||||||| ||||||| |||||||||||| |||| || ||| ||||||||||||||||||||| ||    
T  20487928 ttgcagaagactgtaaaagtgaagcaacggctattttgaaaggatttgaaggcattggatgcttgttcttc-aaagagcgttgacaaagtacgtttgtac 20488026  T
Q  200 gaagtgtacaaccactacctcc 221  Q
    ||||| ||||||||||||||||    
T  20488027 gaagtttacaaccactacctcc 20488048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 15954941 - 15954722
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||  | ||| | ||||||||| ||||||||| | |||||||||||| |||||||||||| ||||| |||||||| ||| |||||||||    
T  15954941 agtttatcagaagctgagaattaccagaagctgtagttcatcaagagatgcaacttaaagcttcaaaagctgtttaacggattcaaactcttctaaagat 15954842  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| ||||||||| |||||||||||||| |||||||| ||||||| |||||| ||||| |||  || ||| ||||||||||||||||||||| |||    
T  15954841 tgcagaagactggaaaaatgaagcaacgactaatttgaaaggatttgaaggcattgaatgcttgttattc-aaagagcgttgacaaagtacgtttgtacg 15954743  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  15954742 aagtgtacaaccactacctcc 15954722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 35 - 221
Target Start/End: Complemental strand, 16877417 - 16877232
Alignment:
Q  35 agttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactatt 134  Q
    ||||||||| | |||||||||||| |||||||||| | |||||||||||||| |||||||||||||||||||| ||||  |||||||||||||||||||     
T  16877417 agttcatcaggagatgcaacttaaagcttcaaaagttgtttaatggattcaaactcgtctaaagattgcagaagactgagaaagtgaagcaacgactatc 16877318  T
Q  135 ttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    || |||| ||||||| | ||||||||||| |||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  16877317 ttaaaaggatttgaaggaattggatgctaattcctc-aaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctcc 16877232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 21618482 - 21618263
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||  | ||||| ||||||||| |||||||||   |||||||||||| |||||||||| | ||||| |||||||| ||| |||||||||    
T  21618482 agtttatcagaagctgagaatcaccagaagctgtagttcatcagaagatgcaacttaaagcttcaaaagttgtttaacggattcaaactcttctaaagat 21618383  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    || |||| ||||||||||| ||||||||||||||||| ||| ||||||| ||||||||||||  ||| || ||| |||||||||| |||||||||| |||    
T  21618382 tgtagaagactggaaaagtaaagcaacgactattttggaaggatttgaaggcattggatgcttattcttc-aaagagcgttgacatagtacgtttgtacg 21618284  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  21618283 aagtgtacaaccactacctcc 21618263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 12349211 - 12349012
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagt 119  Q
    |||||||||||||||||||||||| | |||||||||||  |||||||||||| ||| | |||||||| ||||||| |||||||||||| |||||||||||    
T  12349211 atcatcagaagctgcagttcatcaggagatgcaacttagagcttcaaaagctgtttcaaggattcaaactcgtct-aagattgcagaagactggaaaagt 12349113  T
Q  120 gaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacct 219  Q
      |||||||||||||||||||| |||  || ||||||||||||  ||| || ||| |||||||||| |||||||||| || |||||||||||||||| ||    
T  12349112 atagcaacgactattttgaaaggattgaaaggcattggatgcttattcttc-aaagagcgttgacatagtacgtttgtacaaagtgtacaaccactatct 12349014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 16336365 - 16336151
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||  | ||||| |||||| || || |||||| | |||||||||| | |||||||||| | ||||| |||||||| |||||||||| ||    
T  16336365 agtttatcagaagctgagaatcaccagaagttgtagatcatcaggagatgcaacttgaagcttcaaaagttgtttaaaggattcaaactcgtctaaacat 16336266  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| |||||||||||  |||||||||||||||| ||| ||| ||| |||||| |||||  ||| || ||| |||||||||| |||||| ||| |||    
T  16336265 tgcagaagactggaaaagtatagcaacgactattttggaaggattagaaggcattgaatgcttattcttc-aaagagcgttgacatagtacgattgtacg 16336167  T
Q  201 aagtgtacaaccacta 216  Q
    ||||||||||||||||    
T  16336166 aagtgtacaaccacta 16336151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 22076336 - 22076537
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| |||||| || ||||||||| | |||||||||||| |||| ||||||| ||||| ||||| || |||||||||||||||||||| ||| ||||||    
T  22076336 aatcaccagaagatgtagttcatcaggagatgcaacttaaagctttaaaagctgtttaaaggatttaaactcgtctaaagattgcagaagactcgaaaag 22076435  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    |  |||||||||||||||| ||| ||| ||| ||||| ||||||  ||| || ||| |||||||||| ||||| |||| ||||||||||||||||||| |    
T  22076436 tatagcaacgactattttggaaggattggaaagcatttgatgcttattcttc-aaagagcgttgacatagtacatttgtacgaagtgtacaaccactatc 22076534  T
Q  219 tcc 221  Q
    |||    
T  22076535 tcc 22076537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 221
Target Start/End: Original strand, 20730631 - 20730834
Alignment:
Q  17 aaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaa 116  Q
    |||||||  |||||||||||||||||| | |||| |||  || |||||||| ||| || || ||||| || ||| |||||  ||||||||| ||||||||    
T  20730631 aaaatcactagaagctgcagttcatcaggagatgtaacaaaaagcttcaaaggctgttcaagggatttaatctcatctaagtattgcagaagactggaaa 20730730  T
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    |||||||||||||||| |||||||| ||||||| |||||||||| | |||| || ||| ||||||||||||||||  ||| || ||||||||||||||||    
T  20730731 agtgaagcaacgactagtttgaaaggatttgaaggcattggatgtttgttcttc-aaagagcgttgacaaagtacaattgtacaaagtgtacaaccacta 20730829  T
Q  217 cctcc 221  Q
    |||||    
T  20730830 cctcc 20730834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 22802379 - 22802160
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||| |||||||||  ||||||| |||||| || ||||||||| | |||||||| ||| |||||||| | | || |||||||| ||  | ||||||  ||    
T  22802379 agttcatcagaagctgaaaatcaccagaagttgtagttcatcaggagatgcaacataaagcttcaaaggttgttcaatggatttaatattgtctaagcat 22802280  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||  |||||||||||||| ||||||| | ||||||||||||| || |||||||||||| |||| || ||| |||||| |||||||||  ||| |||    
T  22802279 tgcagacgactggaaaagtgaaacaacgacaagtttgaaagaatttaaaggcattggatgcttgttcttc-aaagagcgttaacaaagtacaattgtacg 22802181  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  22802180 aagtgtacaaccactacctcc 22802160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 32544505 - 32544284
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaag 98  Q
    |||| |||||||||  ||||||| || |||||  ||||||||| | |||||||  ||||| |||||||| | | || |||||||| || |||||||||      
T  32544505 agttcatcagaagctgaaaatcaccataagctctagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagc 32544406  T
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||||||| |||||||||||| |||||||||||| |||| || |||||||||| |  ||| || ||| ||||||||||||||||  ||| |    
T  32544405 attgcagaagactggaagagtgaagcaacgtctattttgaaaggatttaaaggcattggatgtttattcttc-aaagagcgttgacaaagtacaattgta 32544307  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||||    
T  32544306 cgaagtgtacaaccactacctcc 32544284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 221
Target Start/End: Complemental strand, 9718058 - 9717862
Alignment:
Q  26 agaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaag 123  Q
    |||||||  ||||||||| | |||||||  ||||| |||||||| | | || |||||||| || |||||||||| |||| |||| ||||||| |||||||    
T  9718058 agaagctctagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaaacattgtagaagactggaagagtgaag 9717959  T
Q  124 caacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||| ||||||||||||| |||| || ||||| |||||| |||| || ||| ||||||||||||||||  ||| ||||||||||||||||||||||||    
T  9717958 caacaactattttgaaaggatttaaaggcatttgatgcttgttcttc-aaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctcc 9717862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 217
Target Start/End: Complemental strand, 19688984 - 19688789
Alignment:
Q  21 tcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtg 120  Q
    ||||||||||||| ||||||||| | ||||| |||||| |||||||| | | || |||||||| |  |||||| ||  |||| |||| ||||||| ||||    
T  19688984 tcatcagaagctgaagttcatcaggagatgcgacttaaagcttcaaaggttgttcaatggatttattctcgtccaagcattgtagaaaactggaagagtg 19688885  T
Q  121 aagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    |||||| |||||||||||||| ||||||| |||||||||| | |||| || ||| ||||||||||||||||  ||| |||||||||| |||||||||    
T  19688884 aagcaaggactattttgaaaggatttgaaggcattggatgtttgttcttc-aaagagcgttgacaaagtacaattgtacgaagtgtataaccactac 19688789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 21 - 221
Target Start/End: Complemental strand, 29918236 - 29918036
Alignment:
Q  21 tcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||||||||||| ||||||||| | |||||||  ||||| |||||||| | | || | |||||| || |||||||||  ||||||||| | ||||||||    
T  29918236 tcatcagaagctgtagttcatcaggagatgcaagacttaaagcttcaaaggttgttca-tggatttaatctcgtctaagcattgcagaagattggaaaag 29918138  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    |||||||||||||| |||||||  ||||||| ||||  |||||| |||| || ||| ||||||||||||||||  ||| |||||||||||||||||||||    
T  29918137 tgaagcaacgactagtttgaaaagatttgaaggcatcagatgcttgttcttc-aaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacc 29918039  T
Q  219 tcc 221  Q
    |||    
T  29918038 tcc 29918036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 13435767 - 13435551
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    |||||||||  || |||| || |||||| ||||||||| | |||||||  ||||| |||||||| | | || |||||||| || ||||| |||  |||||    
T  13435767 atcagaagcagaagatcaccataagctgaagttcatcaggagatgcaagacttaaagcttcaaaggattttcaatggatttaatctcgtttaagcattgc 13435668  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| | ||||| ||||||||||||||||||||||||| ||||||| |||||| ||| | ||| ||   |||||||||||||||||||  ||| ||||||    
T  13435667 agaagattggaagagtgaagcaacgactattttgaaaggatttgaaagcattgaatgattgtt-ctttgaaaagcgttgacaaagtacaattgtacgaag 13435569  T
Q  204 tgtacaaccactacctcc 221  Q
    ||||||||||||||||||    
T  13435568 tgtacaaccactacctcc 13435551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 64 - 221
Target Start/End: Complemental strand, 12423435 - 12423280
Alignment:
Q  64 caaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgcta 163  Q
    |||||||| |||||||||||||| ||||||||| || ||||||| |||||||||||  |||||||||||||||||||| ||| ||| |||||| |||||     
T  12423435 caaaagctgtttaatggattcaaactcgtctaa-gaatgcagaagactggaaaagtatagcaacgactattttgaaaggattggaaggcattgtatgctt 12423337  T
Q  164 gttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
     ||| || ||| |||||||||| ||||| |||| ||||||||||||||||||| ||||    
T  12423336 attcttc-aaagagcgttgacatagtacctttgtacgaagtgtacaaccactatctcc 12423280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 16265061 - 16265280
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||| |||||||||  ||||||| ||||||||||||||| ||| | |||||||| ||| |||| ||| | | || |||||||| || ||| |||||  ||    
T  16265061 agttcatcagaagctgaaaatcaccagaagctgcagttcgtcaagagatgcaacataaagcttgaaaggttgttcaatggatttaatctcatctaagcat 16265160  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    |||| |  ||||||||||||||||||||| ||  |||||||  |||||| |||||||||||| |||| || ||| |||||||| |||||||  ||| |||    
T  16265161 tgcacaggactggaaaagtgaagcaacgagtagattgaaaggttttgaatgcattggatgcttgttcttc-aaagagcgttgagaaagtacaattgtacg 16265259  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||| ||||||||||||||    
T  16265260 aagtgtgcaaccactacctcc 16265280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 26972137 - 26972356
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaag 98  Q
    |||| |||||||||  ||||||| ||||||||  | ||||||| | |||||||  ||||| |||||||| | | || |||||||| || |||||||||      
T  26972137 agttcatcagaagcagaaaatcaccagaagctctatttcatcaggagatgcaagacttaaagcttcaaatgttgttcaatggatttaatctcgtctaagc 26972236  T
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||| ||| ||||||||||| ||||||||||||| |||| || |||||||||| | |||| || ||| ||||||||||||||||  |||      
T  26972237 attgcagaagacttgaagagtgaagcaacaactattttgaaaggatttaaaggcattggatgtttgttcttc-aaagagcgttgacaaagtacaattg-- 26972333  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||||    
T  26972334 cgaagtgtacaaccactacctcc 26972356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 18435796 - 18435575
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaag 98  Q
    |||| |||||||||  || ||||  |||||||  ||||||||| | |||||||  ||||| ||||  || | |||| |||||||| || |||||||||      
T  18435796 agttcatcagaagctgaagatcactagaagctctagttcatcaggagatgcaagacttaaagctttgaaggttattcaatggatttaatctcgtctaaga 18435697  T
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||| || || ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| |||| || ||| ||||||||||||||||   || |    
T  18435696 atttcaaaagactagaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttcttc-aaagagcgttgacaaagtacaagtgta 18435598  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    | |||||||||||||||||||||    
T  18435597 caaagtgtacaaccactacctcc 18435575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 221
Target Start/End: Original strand, 14100369 - 14100570
Alignment:
Q  21 tcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||||||||||| ||||||||| | |||||||  ||||| | |||||| | | || |||||||| || ||| |||||  |||| |||| ||||||| ||    
T  14100369 tcatcagaagctgaagttcatcaggagatgcaagacttaaagtttcaaaggatgttcaatggatttaatctcatctaagcattgtagaagactggaagag 14100468  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    ||||| ||| ||||||||||||| ||||||| ||||||||||||  || ||  ||| ||||||||||||||||  ||  |||||||||||||||||||||    
T  14100469 tgaagaaacaactattttgaaaggatttgaaggcattggatgcttctt-ctttaaagagcgttgacaaagtacaattatacgaagtgtacaaccactacc 14100567  T
Q  219 tcc 221  Q
    |||    
T  14100568 tcc 14100570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 213
Target Start/End: Complemental strand, 23284779 - 23284591
Alignment:
Q  26 agaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaag 123  Q
    |||||||| ||||||||| | |||||||  ||||| |||||||| | | || |||||||| || |||||||||  ||||||||| ||  |||||||||||    
T  23284779 agaagctgaagttcatcaggagatgcaagacttaaagcttcaaatgttgttcaatggatttaatctcgtctaagcattgcagaagaccagaaaagtgaag 23284680  T
Q  124 caacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaacca 213  Q
    ||||| |||||||||||| ||||||| |||||| ||||| ||||||   || ||||||||||||||||  ||| |||||||||| |||||    
T  23284679 caacgcctattttgaaaggatttgaaggcattgaatgcttgttcct-tgaagagcgttgacaaagtacaattgtacgaagtgtataacca 23284591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 221
Target Start/End: Original strand, 20112614 - 20112830
Alignment:
Q  7 tcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctattt-aatggattcaacctcgtctaaagattgc 103  Q
    |||||||| ||| |||| | ||||||| ||||||||| | |||||||  ||||| |||| ||||| |  || |||||||| || ||| |||||  |||||    
T  20112614 tcagaagctaaagatcacctgaagctgaagttcatcaagagatgcaagacttaaagcttaaaaaggttgttcaatggatttaatctcttctaagcattgc 20112713  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| || |||| | ||||||||||||||||||||||| ||||||| |||||||||||| ||| ||   || ||||||||||||||||  ||| |||||     
T  20112714 agaagaccggaagaatgaagcaacgactattttgaaaggatttgaaagcattggatgcttgtt-ctttgaagagcgttgacaaagtacaattgtacgaaa 20112812  T
Q  204 tgtacaaccactacctcc 221  Q
    ||||||||||||| ||||    
T  20112813 tgtacaaccactatctcc 20112830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 76 - 221
Target Start/End: Complemental strand, 15302363 - 15302219
Alignment:
Q  76 aatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaa 175  Q
    |||||||| || |||||||||| ||||||||| |||||||||||||||||||| |||||||||||| |||| || |||||||||||| ||| ||   ||     
T  15302363 aatggatttaatctcgtctaaacattgcagaagactggaaaagtgaagcaacggctattttgaaaggatttaaaggcattggatgcttgtt-ctttgaag 15302265  T
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||  ||||  ||| || |||||||||||||||| ||||    
T  15302264 agcgttgacattgtacaattgtacaaagtgtacaaccactatctcc 15302219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 88 - 221
Target Start/End: Original strand, 15531622 - 15531754
Alignment:
Q  88 ctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaa 187  Q
    |||||||||  ||||||||| ||| ||| ||| || |||||  ||||||||||| ||||||| |||||||||||| |||| || ||| ||||||||||||    
T  15531622 ctcgtctaagcattgcagaagactagaagagtaaaacaacggttattttgaaaggatttgaaggcattggatgcttgttcttc-aaagagcgttgacaaa 15531720  T
Q  188 gtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||  ||| |||||| |||||||||||||||||    
T  15531721 gtacaattgtacgaagcgtacaaccactacctcc 15531754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 76 - 221
Target Start/End: Complemental strand, 18378477 - 18378333
Alignment:
Q  76 aatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaa 175  Q
    |||||||| || |||||||||  |||||| || ||||||| ||| ||||||| ||||||||||||| ||||||| |||||||||||  ||| ||   ||     
T  18378477 aatggattaaatctcgtctaagtattgcaaaagactggaagagtcaagcaacaactattttgaaaggatttgaaggcattggatgcatgtt-ctttgaag 18378379  T
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||| |||||||  ||| ||||||||||||||||||| ||||    
T  18378378 agcgttgataaagtacaattgtacgaagtgtacaaccactatctcc 18378333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 76 - 221
Target Start/End: Complemental strand, 21625263 - 21625120
Alignment:
Q  76 aatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaa 175  Q
    |||||||| || |||||||||  ||||||||| | ||||| ||| |||||||| |||||| ||||| ||||||| |||||| ||||| |||| ||||| |    
T  21625263 aatggatttaatctcgtctaagcattgcagaagattggaagagtaaagcaacggctattt-gaaagcatttgaaggcattgcatgcttgttcttcaaaga 21625165  T
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
     ||||| |||||||||  ||| ||||||||||||||||||| ||||    
T  21625164 -gcgttaacaaagtacaattgtacgaagtgtacaaccactatctcc 21625120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 221
Target Start/End: Original strand, 12715353 - 12715550
Alignment:
Q  26 agaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaag-ctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaa 122  Q
    ||||| || ||||||||| | |||||||  ||||| |||||||||| || || |||||||| || |||||||||  ||||||||| | || || ||||||    
T  12715353 agaagttgtagttcatcaggagatgcaagacttaaagcttcaaaaggctgttcaatggatttaatctcgtctaagcattgcagaagattgaaagagtgaa 12715452  T
Q  123 gcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||||  ||||||| |||||| ||||   || ||   || ||||||||||||||||  ||| |||||||||| |||||||| ||||    
T  12715453 gcaacgactattttgaaatgatttgaaagcattgtatgcctatt-ctttgaagagcgttgacaaagtacaattgtacgaagtgtagaaccactatctcc 12715550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 33351858 - 33352056
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| ||||| ||||| ||||||  | |||||||||||| || ||||||||| ||| | |||||||  ||||||| |||| ||||||| ||||||||||    
T  33351858 aatcaccagaaactgcatttcatcgggagatgcaacttaaagcctcaaaagctgtttcaaggattcacactcgtct-aagagtgcagaagactggaaaag 33351956  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    |  ||||| | |||||||||||| |||  ||  ||||||||| |  ||| ||  || |||||||||| |||||||||| ||||||||||||| ||||| |    
T  33351957 tatagcaa-ggctattttgaaaggattgaaaaacattggatgtttattcttc--aagagcgttgacatagtacgtttgtacgaagtgtacaatcactatc 33352053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 76 - 221
Target Start/End: Complemental strand, 15987397 - 15987252
Alignment:
Q  76 aatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaaga-atttgaacgcattggatgctagttcctcaaaa 174  Q
    |||||||| || |||||||||  ||||||||| ||  ||| |||||||||| ||||||||| ||||  ||||||| |||||||||||| |||| |  ||     
T  15987397 aatggatttaatctcgtctaagcattgcagaagaccagaagagtgaagcaatgactattttaaaagggatttgaaggcattggatgcttgttctttgaag 15987298  T
Q  175 aagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    | |||||||||||||||  ||| ||||||||||||||||||| ||||    
T  15987297 a-gcgttgacaaagtacaattgtacgaagtgtacaaccactatctcc 15987252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 19065957 - 19066144
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagt 119  Q
    |||| ||||||||||||||||||| | |||| | ||||| |||||||||||| ||| | ||| || | |||| ||| | ||||||||| |||||||||||    
T  19065957 atcaccagaagctgcagttcatcaggagatggatcttaaagcttcaaaagctgtttcaaggactctaactcgcctagaaattgcagaagactggaaaagt 19066056  T
Q  120 gaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
       |||||| |||||||||         || ||||||||||||  ||| || ||| |||||||||| |||| ||||| ||||||||||||||||||||    
T  19066057 atggcaacggctattttga---------aatgcattggatgcttattcttc-aaagagcgttgacatagtatgtttgtacgaagtgtacaaccactac 19066144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 139279 - 139374
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatg-gattcaacctcgtcta 95  Q
    |||||||||||||| |||||||| |||||  ||  ||||||||  |||||||||||||||||||||||||| ||||||| |||| |||| ||||||    
T  139279 agtttatcagaagctaaaaatcaccagaaattgtcgttcatcagaggatgcaacttaaggcttcaaaagctgtttaatgagatttaaccccgtcta 139374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 147300 - 147395
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatg-gattcaacctcgtcta 95  Q
    |||||||||||||| |||||||| |||||  ||  ||||||||  |||||||||||||||||||||||||| ||||||| |||| |||| ||||||    
T  147300 agtttatcagaagctaaaaatcaccagaaattgtcgttcatcagaggatgcaacttaaggcttcaaaagctgtttaatgagatttaaccccgtcta 147395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 26 - 162
Target Start/End: Complemental strand, 13602387 - 13602249
Alignment:
Q  26 agaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaag 123  Q
    |||||||  ||||||||| | |||||||  ||||| |||||||| | | || |||||||| || || ||||||  ||||||||| ||||||| |||||||    
T  13602387 agaagctatagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatcttgtctaagcattgcagaagactggaagagtgaag 13602288  T
Q  124 caacgactattttgaaagaatttgaacgcattggatgct 162  Q
    |||| ||||||||||||  | ||||| ||||||||||||    
T  13602287 caaccactattttgaaatgaattgaaggcattggatgct 13602249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 160
Target Start/End: Complemental strand, 19624200 - 19624058
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| ||||||||| ||||||||| | |||||||  ||||| |||||||| | | || ||||||||||| |||||| ||  |||||| || ||  ||  |    
T  19624200 atcaccagaagctgaagttcatcaggagatgcaagtcttaaagcttcaaaggttgttcaatggattcaatctcgtccaagcattgcaaaagaccagagga 19624101  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatg 160  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||    
T  19624100 gtgaagcaacgactattctgaaaggatttgaaagcattggatg 19624058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 210
Target Start/End: Original strand, 34451596 - 34451787
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| ||||||||  ||||||||| | |||||||  ||||| | |||||| ||| || ||||||||||   ||||||||  ||||||||| |||| || |    
T  34451596 atcaccagaagctctagttcatcaggagatgcaagacttaaagattcaaaggctgttcaatggattcagtatcgtctaagcattgcagaagactgaaaga 34451695  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaa 210  Q
    ||||||||||||||| ||||| || ||||||| |||||| ||||   || ||   |||||||||||||||||||  ||| || ||||||||||    
T  34451696 gtgaagcaacgactaatttgagaggatttgaaagcattgtatgcctatt-ctttgaaaagcgttgacaaagtacaattgtacaaagtgtacaa 34451787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 221
Target Start/End: Complemental strand, 21235229 - 21235144
Alignment:
Q  135 ttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||| ||||||| ||||| |||||| |||| ||||| | |||||||||||||||  ||| | ||||||||||||||||||||||    
T  21235229 ttgaaagcatttgaaggcattcgatgcttgttcttcaaaga-gcgttgacaaagtacaattgtatgaagtgtacaaccactacctcc 21235144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 17381585 - 17381540
Alignment:
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  17381585 agcgttgacaaagtacgtttgtacgaagtgtacaatcactacctcc 17381540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17381652 - 17381603
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatg 50  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||||||||||    
T  17381652 agtttatcaaaagccaaaaatcaccagaacctgcagttcatcatgggatg 17381603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 19086311 - 19086246
Alignment:
Q  76 aatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaag 141  Q
    |||||||| || |||||||||  ||||||||| ||||| | |||||||||||||||||||||||||    
T  19086311 aatggatttaatctcgtctaagtattgcagaagactgggagagtgaagcaacgactattttgaaag 19086246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 24117015 - 24116847
Alignment:
Q  53 acttaaggcttcaaaag-ctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacg 151  Q
    |||||| |||||||||| || || ||||||||||| |||||| ||  |||||| || ||  ||  ||||||| | ||  ||||||||||| ||||||| |    
T  24117015 acttaaagcttcaaaaggctgttcaatggattcaatctcgtccaagcattgcaaaagaccagaggagtgaagtagcggttattttgaaaggatttgaaag 24116916  T
Q  152 cattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||| |||| |  || | ||||||||| |||||  ||| ||||||||||||||||||| ||||    
T  24116915 cattggatgcttgttctttgaaga-gcgttgacatagtacaattgtacgaagtgtacaaccactatctcc 24116847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 21235351 - 21235256
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaa 96  Q
    |||| |||||||||  |||||||  |||||||||||||||||| | |||||||| ||| |||| ||| | | || |||||||| || |||||||||    
T  21235351 agttcatcagaagctgaaaatcactagaagctgcagttcatcaggagatgcaacataaagctttaaaggttgttcaatggatttaatctcgtctaa 21235256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 19482840 - 19482776
Alignment:
Q  151 gcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    ||||||||||||  ||||||||  | ||||||||| ||| |||||| |||||||||||||||||||    
T  19482840 gcattggatgcttattcctcaagga-gcgttgacatagtgcgtttgtacgaagtgtacaaccacta 19482776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 17316610 - 17316650
Alignment:
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    |||||||||| ||| |||||| |||||||||||||||||||    
T  17316610 agcgttgacatagtgcgtttgtacgaagtgtacaaccacta 17316650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 25594131 - 25594087
Alignment:
Q  177 gcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||  ||| ||||| ||||||||||||||||||    
T  25594131 gcgttgacaaagtacaattgtacgaaatgtacaaccactacctcc 25594087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 134; Significance: 6e-70; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 8105871 - 8105650
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatgg-attcaacctcgtctaaaga 99  Q
    |||||||||||||  |||||||| |||||| ||| |||||| |  |||||||||||||||||||||||| | |||||||| ||||||| |||||||| ||    
T  8105871 agtttatcagaagttaaaaatcaccagaagttgccgttcattagaggatgcaacttaaggcttcaaaagttgtttaatgggattcaacttcgtctaagga 8105772  T
Q  100 ttgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaac 199  Q
    |||||||| ||||||||| |||||||||| |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  8105771 ttgcagaagactggaaaattgaagcaacggctattttgaaaggatttgaacgcattggatgcttgttcctcaaaagagcgttgacaaagtacgtttgtac 8105672  T
Q  200 gaagtgtacaaccactacctcc 221  Q
    ||| ||||||||||||||||||    
T  8105671 gaaatgtacaaccactacctcc 8105650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 5 - 217
Target Start/End: Original strand, 56532943 - 56533156
Alignment:
Q  5 tatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatgg-attcaacctcgtctaaagattgc 103  Q
    ||||||||||||||||||| ||||| ||||||||||| |  ||||| |||||||||||||||||||| ||| |||| |||||||||||||||| ||||||    
T  56532943 tatcagaagccaaaaatcaccagaaactgcagttcattagaggatgtaacttaaggcttcaaaagctgttttatgggattcaacctcgtctaaggattgc 56533042  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| |||| |||| |||||||||| |||||||||||| ||||||| ||||| |||| | ||||||||||| ||||||||||||||||||||| ||||||    
T  56533043 agaagactgaaaaaatgaagcaacggctattttgaaaggatttgaatgcattagatgtttgttcctcaaaagagcgttgacaaagtacgtttgtacgaag 56533142  T
Q  204 tgtacaaccactac 217  Q
    ||||||||||||||    
T  56533143 tgtacaaccactac 56533156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 47 - 221
Target Start/End: Complemental strand, 29121556 - 29121383
Alignment:
Q  47 gatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaattt 146  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  29121556 gatgcaacttaaggcttcaaaagctgtttaatggattcaacctcgtctaaagattgcagaagactgaaaaagtgaagcaacgactattttgaaaggattt 29121457  T
Q  147 gaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||| ||| |||||||| ||| ||  ||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  29121456 gaaggcactggatgcttgtt-ctttaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctcc 29121383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 10693083 - 10692864
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||| |||||||||  | ||||| ||||||||| ||||||||| | |||||||||||| |||||||||| | ||||| |||||||| |||||||||||||    
T  10693083 agttcatcagaagctgagaatcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaacggattcaaactcgtctaaagat 10692984  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||||||| |||||||||||| |||| || ||| |||||| |||||||||||||| | |    
T  10692983 tgcagaagactggaaaagtgaagcaacaactattttgaaaggatttgaaggcattggatgcttgttcttc-aaagagcgtttacaaagtacgtttgtatg 10692885  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  10692884 aagtgtacaaccactacctcc 10692864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 10906849 - 10906630
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||| |||||||||  | ||||| ||||||||| ||||||||| | |||||||||||| |||||||||| | ||||| |||||||| |||||||||||||    
T  10906849 agttcatcagaagctgagaatcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagttgtttaacggattcaaactcgtctaaagat 10906750  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||||||| |||||||||||| |||| || ||| |||||| |||||||||||||| | |    
T  10906749 tgcagaagactggaaaagtgaagcaacaactattttgaaaggatttgaaggcattggatgcttgttcttc-aaagagcgtttacaaagtacgtttgtatg 10906651  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  10906650 aagtgtacaaccactacctcc 10906630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 54680155 - 54679943
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcag 105  Q
    |||||||||  ||||||| ||||||||||||||||||| | |||||||||||| |||||||||||| ||||||||  |||| ||||||||| ||||||||    
T  54680155 atcagaagctgaaaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagctgtttaatgg--tcaaactcgtctaatgattgcag 54680058  T
Q  106 aatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtg 205  Q
    || ||||||||||||||||||| ||||||||||||| ||||||| |||||||||| | |||| || ||| ||| ||||||||||||||||| ||||||||    
T  54680057 aagactggaaaagtgaagcaacaactattttgaaaggatttgaaggcattggatgtttgttcttc-aaagagcattgacaaagtacgtttgtacgaagtg 54679959  T
Q  206 tacaaccactacctcc 221  Q
    ||||||||||||||||    
T  54679958 tacaaccactacctcc 54679943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 413234 - 413015
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||| |||||||||  ||||||| ||||||||||||||||||| | ||| |||||||| |||||||||| | || ||||||||||| |||||||||  ||    
T  413234 agttcatcagaagctgaaaatcaccagaagctgcagttcatcaggagattcaacttaaagcttcaaaagttgttcaatggattcaatctcgtctaagcat 413135  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| ||| |||||||||||||||| ||| |||||||| ||||||| |||||| ||| | |||| || ||| ||||||||||||||||| ||| |||    
T  413134 tgcagaagactcgaaaagtgaagcaacggctaatttgaaaggatttgaaggcattgaatgtttgttcttc-aaagagcgttgacaaagtacgattgtacg 413036  T
Q  201 aagtgtacaaccactacctcc 221  Q
    ||||||||||||||| |||||    
T  413035 aagtgtacaaccactgcctcc 413015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 6517717 - 6517498
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||| |||||||||  | ||||| |||||| || ||||||||| | |||||||||||| |||||||||| ||||||| |||||||| |||||||||||||    
T  6517717 agttcatcagaagctgagaatcaccagaagttgtagttcatcaggagatgcaacttaaagcttcaaaagttatttaaaggattcaaactcgtctaaagat 6517618  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| |||||||||||  |||||||||||||||| ||| ||| ||| ||||  ||||||  ||| || ||| |||||||||| |||||||||| |||    
T  6517617 tgcagaagactggaaaagtatagcaacgactattttggaaggattggaaagcatgagatgcttattcttc-aaagagcgttgacatagtacgtttgtacg 6517519  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||| ||||    
T  6517518 aagtgtacaaccactatctcc 6517498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 221
Target Start/End: Original strand, 22675404 - 22675618
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcag 105  Q
    ||||||||| |||||||  ||||||||||||||||| | | |||||||| ||| |||||||| ||| || |||||||| || |||||||||  |||||||    
T  22675404 atcagaagcaaaaaatccccagaagctgcagttcattaggagatgcaacataaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcag 22675503  T
Q  106 aatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtg 205  Q
    || ||| |||||||||||||||||||| |||||||| ||||||| ||||| |||||| |||| || ||| ||||||||||||||||  ||| || |||||    
T  22675504 aagactagaaaagtgaagcaacgactagtttgaaaggatttgaaggcatttgatgcttgttcttc-aaagagcgttgacaaagtacaattgtacaaagtg 22675602  T
Q  206 tacaaccactacctcc 221  Q
    ||||||||||||||||    
T  22675603 tacaaccactacctcc 22675618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 17247475 - 17247257
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||| |||||||||  ||||||| ||||||||||||||||||| | |||| | ||||| |||||||||| | || ||||||||||| |||||||||  ||    
T  17247475 agttcatcagaagctgaaaatcaccagaagctgcagttcatcaggagatgaatcttaaagcttcaaaagttgttcaatggattcaatctcgtctaagcat 17247376  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| | ||| |||||||||||||||||| |||||||| ||||||| |||||| ||| | |||| ||||| || | ||||||||||||  ||| |||    
T  17247375 tgcagaagattgg-aaagtgaagcaacgactaatttgaaaggatttgaaggcattgaatgtttgttcttcaaagaa-cattgacaaagtacaattgtacg 17247278  T
Q  201 aagtgtacaaccactacctcc 221  Q
    ||||||||||||||| |||||    
T  17247277 aagtgtacaaccactgcctcc 17247257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 19884935 - 19884715
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaag 98  Q
    |||| |||||||||  | ||||| ||||||||| ||||||||| | |||||||  ||||| |||||||| | | || | |||||| || |||||||||      
T  19884935 agttcatcagaagctgacaatcaccagaagctgtagttcatcaggagatgcaagacttaaagcttcaaaggatgttca-tggatttaatctcgtctaagc 19884837  T
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| |||||||||||||||||||||||| |||||||| ||||||| |||||||||||| |||| || ||| ||||||||||||||||  ||| |    
T  19884836 attgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcattggatgcttgttcttc-aaagagcgttgacaaagtacaattgta 19884738  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||| ||||    
T  19884737 cgaagtgtacaaccactatctcc 19884715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 53 - 217
Target Start/End: Complemental strand, 3483901 - 3483738
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| ||||||||| ||||| |||||||| || |||||||||  ||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||    
T  3483901 acttaaagcttcaaaaactattcaatggatttaatctcgtctaagcattgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggc 3483802  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    ||||||||||  ||| || ||| ||||||||||||||||  ||| |||||| | |||||||||||    
T  3483801 attggatgcttattcttc-aaagagcgttgacaaagtacaattgtacgaagcgcacaaccactac 3483738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 37435431 - 37435633
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| ||||||||| ||||||||| | |||||||  ||||| |||||||| | | || |||||||| || |||||| ||  ||||||||| | ||||| |    
T  37435431 atcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtccaagcattgcagaagattggaaga 37435530  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    |||||||||||||||||||||||| ||||||| |||||||||||| |||| || ||| |||||||||| |||||  ||| ||||||||||||||||||||    
T  37435531 gtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttcttc-aaagagcgttgacatagtactattgtacgaagtgtacaaccactac 37435629  T
Q  218 ctcc 221  Q
    ||||    
T  37435630 ctcc 37435633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 217
Target Start/End: Original strand, 13575998 - 13576208
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcag 105  Q
    |||||||||  ||||||| ||||||||||||||||||| | |||||||| ||| ||||||||  || || |||||||| || |||||||||  |||||||    
T  13575998 atcagaagctgaaaatcaccagaagctgcagttcatcaggagatgcaacataaagcttcaaagcctgttcaatggatttaatctcgtctaagcattgcag 13576097  T
Q  106 aatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtg 205  Q
    || ||||||| |||||||||||| ||| |||||||| ||||||| ||||| |||||| |||| || ||| |||||||||| |||||   || ||||||||    
T  13576098 aagactggaagagtgaagcaacgcctagtttgaaaggatttgaaggcattagatgcttgttcttc-aaagagcgttgacatagtacaactgtacgaagtg 13576196  T
Q  206 tacaaccactac 217  Q
    || |||||||||    
T  13576197 taaaaccactac 13576208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 21 - 221
Target Start/End: Original strand, 3105319 - 3105517
Alignment:
Q  21 tcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtg 120  Q
    ||||||||||||||||||||||| | |||||||||||| |||||||||||| ||| | |||||||| ||||||| |||||||||||| |||||||||||     
T  3105319 tcatcagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagctgtttcaaggattcaaactcgtct-aagattgcagaagactggaaaagta 3105417  T
Q  121 aagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctc 220  Q
       ||||| |||||||||||| |||  || | |||||||| |  ||| || ||| |||||||||| |||| ||||| ||||||||||||||||||| |||    
T  3105418 ttccaacggctattttgaaaggattgaaaagtattggatggttattcttc-aaagagcgttgacatagtatgtttgtacgaagtgtacaaccactatctc 3105516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 17398563 - 17398772
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||| ||||||||| |  ||||| |||||||||| |||||||| | |||||||||||| |||||||||| | ||| | |||||||| |||| ||||| ||    
T  17398563 agttcatcagaagctatgaatcaccagaagctgcggttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggattcaaactcgcctaaa-at 17398661  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| |||||||||||  ||||||||||||||||||||         ||||||||||||  ||| || ||| |||||||||| |||||||||| |||    
T  17398662 tgcagaagactggaaaagtatagcaacgactattttgaaag---------gcattggatgcttattcttc-aaagagcgttgacatagtacgtttgtacg 17398751  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||| ||||    
T  17398752 aagtgtacaaccactaactcc 17398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 3395824 - 3395603
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaag 98  Q
    |||||||||||||   || ||||  |||||||  ||||||||| | |||||||  |||||  ||||||||| | || |||||||| ||  ||||||||      
T  3395824 agtttatcagaagttgaagatcactagaagctatagttcatcaggagatgcaagacttaaatcttcaaaagttgttcaatggattaaatatcgtctaagc 3395725  T
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| |||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||   || |||||||||| |||||  ||| |    
T  3395724 attgcagaaaactgaaaaagtgaagcaacgactattttgaaaggatttgaaagcattggatgctagtt-ctttgaagagcgttgacatagtacaattgta 3395626  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||| ||||    
T  3395625 cgaagtgtacaaccactatctcc 3395603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 45833623 - 45833407
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    ||||||||| ||| |||| ||||||||  ||||||||| | |||||||  ||||| |||||||| | | || |||||||| || |||||||||  |||||    
T  45833623 atcagaagctaaagatcaccagaagctctagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgc 45833524  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| ||||||| ||| |||||||  |||||||||||| ||||||| ||||||||||||  || ||   || ||||||||||||||||  ||| ||||||    
T  45833523 agaagactggaagagttaagcaacttctattttgaaagtatttgaatgcattggatgct-ttttcttttaagagcgttgacaaagtacaattgtacgaag 45833425  T
Q  204 tgtacaaccactacctcc 221  Q
    ||||||||||||| ||||    
T  45833424 tgtacaaccactatctcc 45833407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 14604837 - 14605005
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgacta-ttttgaaagaatttgaacg 151  Q
    |||||| |||||||| ||||||  |||||||||| |||||||||  ||||||||| ||| ||| ||||||||||| |||| |||| |||| ||||||| |    
T  14604837 acttaaagcttcaaaggctattctatggattcaatctcgtctaagcattgcagaagactagaagagtgaagcaacaactatttttaaaaggatttgaaag 14604936  T
Q  152 cattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||| ||| ||   || ||||||||||||||||  ||| ||||||||||||||||||||||||    
T  14604937 cattggatgcttgtt-ctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctcc 14605005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 64 - 221
Target Start/End: Original strand, 25651046 - 25651202
Alignment:
Q  64 caaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgcta 163  Q
    |||||| | ||||| |||||||| || |||||||||| |||||| ||| |||||||||||||||| |||||||| ||| ||||||| |||||| |||||     
T  25651046 caaaagttgtttaacggattcaaacttgtctaaagatcgcagaagacttgaaaagtgaagcaacggctattttggaaggatttgaaggcattgaatgctt 25651145  T
Q  164 gttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
     ||| || ||| |||||||||  |||||||||| || |||||||||||||||||||||    
T  25651146 attcttc-aaagagcgttgacgtagtacgtttgtacaaagtgtacaaccactacctcc 25651202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 216
Target Start/End: Complemental strand, 9141069 - 9140930
Alignment:
Q  76 aatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaa 175  Q
    ||||||||||| |||||||||  |||| |||| ||||||||||| ||||||||||||||||||||| ||||||| |||||||||||| ||| ||   ||     
T  9141069 aatggattcaatctcgtctaagcattgtagaagactggaaaagtaaagcaacgactattttgaaaggatttgaaggcattggatgcttgtt-ctttgaag 9140971  T
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    |||||||||| |||||  ||| |||||||||||||||||||    
T  9140970 agcgttgacatagtacaattgtacgaagtgtacaaccacta 9140930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 65 - 221
Target Start/End: Complemental strand, 16940183 - 16940029
Alignment:
Q  65 aaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctag 164  Q
    |||||||  ||||||||||||| ||||||||| |||||||||| |||||||||||  |||||||||||||||||||| |||  || |||||| |||||      
T  16940183 aaaagctgcttaatggattcaaactcgtctaa-gattgcagaagactggaaaagtatagcaacgactattttgaaaggattgaaaggcattgaatgctta 16940085  T
Q  165 ttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||| || ||  |||||||||| |||||||||| ||||||||||||||||||| ||||    
T  16940084 ttcttc-aaggagcgttgacatagtacgtttgtacgaagtgtacaaccactatctcc 16940029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 221
Target Start/End: Original strand, 19620958 - 19621159
Alignment:
Q  21 tcatcagaagctgcagttcatcatgggatgcaac--ttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||||||||||| ||||||||| | |||||||   |||| |||||||| | | || ||||||||||| |||||| ||  |||||| || ||  || |||    
T  19620958 tcatcagaagctgaagttcatcaggagatgcaagagttaaagcttcaaaggttgttcaatggattcaatctcgtccaagcattgcaaaagaccagagaag 19621057  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| |||| |   || |||||||||| |||||  ||| ||||||||||||||||||| |    
T  19621058 tgaagcaacgactattttgaaaggatttgaaagcattggatgcttgttc-tatgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatc 19621156  T
Q  219 tcc 221  Q
    |||    
T  19621157 tcc 19621159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 221
Target Start/End: Complemental strand, 16632649 - 16632453
Alignment:
Q  26 agaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaag 123  Q
    |||||||  ||||||||| | |||||||  ||||| |||||||| | | || |||||||| || ||||| |||  ||||||||| ||||||| ||||||     
T  16632649 agaagctaaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtataagcattgcagaagactggaagagtgaat 16632550  T
Q  124 caacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||  ||||||| ||||||||| || ||| ||   || ||||||||||||||||  ||| ||||||||||||||||||||||||    
T  16632549 caacgactattttgaaaagatttgaaggcattggattcttgtt-ctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctcc 16632453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 56034789 - 56034617
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| ||||||||| |||||||||   |||||||  ||||| ||||||||  || || |||||||| || |||||| ||  ||||||||| ||||||| |    
T  56034789 atcaccagaagctgaagttcatcagaagatgcaagacttaaagcttcaaagactgttcaatggatttaatctcgtccaagcattgcagaagactggaaga 56034690  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtac 191  Q
    ||||||||||||||||||||||| |||||||| |||||||||| | |||| || ||| ||||||||||||||||    
T  56034689 gtgaagcaacgactattttgaaataatttgaaggcattggatgtttgttcttc-aaagagcgttgacaaagtac 56034617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 12601281 - 12601114
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| || ||||| ||| || |||||||| || |||||||||  ||||||||| ||| ||| |||||| |||||||||||||||||| ||||||| ||    
T  12601281 acttaaagcgtcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagacttgaatagtgaatcaacgactattttgaaaggatttgaaggc 12601182  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||| ||| ||   || |||||||||| |||||  ||| ||||||||||||||||||| ||||    
T  12601181 attggatgcttgtt-ctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctcc 12601114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 19666552 - 19666385
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||| ||| | |||| |||||||| || |||||||||  ||||||||| ||||||| ||||||||||||||||||||||||| ||||||| ||    
T  19666552 acttaaagcttgaaaggttattcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttgaaaggatttgaaagc 19666453  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||| || || ||| ||   || || |||||||||||||  ||| ||||||||||||||||||| ||||    
T  19666452 attgaatacttgtt-ctttgaagagagttgacaaagtacaattgtacgaagtgtacaaccactatctcc 19666385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 37 - 221
Target Start/End: Original strand, 37985525 - 37985710
Alignment:
Q  37 ttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactatt 134  Q
    ||||||||| |||||||  ||||| |||||||| | | || |||||||| || ||| |||||  || |||||| |||| |||||||||||||| ||||||    
T  37985525 ttcatcatgagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcatctaagcatcgcagaagactgaaaaagtgaagcaacaactatt 37985624  T
Q  135 ttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||| ||||||| |||||||||||| ||| ||   || |||||||||| |||||  ||| ||||||||||||||||||| ||||    
T  37985625 ttgaaaggatttgaaggcattggatgcttgtt-ctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctcc 37985710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 27 - 162
Target Start/End: Complemental strand, 55731985 - 55731851
Alignment:
Q  27 gaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaa 126  Q
    ||||||||||||||||| | ||||||||||||  ||||||||| | |||||||||||||| |||||||||  |||||| || |||||| | || || |||    
T  55731985 gaagctgcagttcatcaggagatgcaacttaaaacttcaaaagttgtttaatggattcaaactcgtctaacaattgcaaaagactggagaggtaaatcaa 55731886  T
Q  127 cgactattttgaaagaatttgaacgcattggatgct 162  Q
    ||||||||||||||| ||||||| | ||||||||||    
T  55731885 cgactattttgaaaggatttgaa-ggattggatgct 55731851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 14833576 - 14833462
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| | | || ||| ||||||| |||||||||  ||||||||| ||||||| ||||||||||||||||||||||||| ||||||| ||    
T  14833576 acttaaagcttcaaaggatgttcaatagattcaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttgaaaggatttgaaagc 14833477  T
Q  153 attggatgctagttc 167  Q
    |||||||||| ||||    
T  14833476 attggatgcttgttc 14833462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 76 - 210
Target Start/End: Original strand, 29680498 - 29680631
Alignment:
Q  76 aatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaa 175  Q
    |||||||| || || ||||||  ||||||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||||||||| ||| ||   ||     
T  29680498 aatggatttaatcttgtctaagcattgcagaagactggaagagtgaagcaacgactattttgaaaggatttgaaagcattggatgcttgtt-ctttgaag 29680596  T
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaa 210  Q
    ||||||||||||||||  ||| |||||||||||||    
T  29680597 agcgttgacaaagtacaattgtacgaagtgtacaa 29680631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 89 - 221
Target Start/End: Original strand, 12811145 - 12811273
Alignment:
Q  89 tcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaag 188  Q
    ||||||||  ||||||||| |||| || ||||||||||||||||||||||||| ||||||| |||||||||||| ||||     || |||||||||||||    
T  12811145 tcgtctaagcattgcagaagactgaaagagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttc----taatagcgttgacaaag 12811240  T
Q  189 tacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||   ||| ||||||||||||||||||| ||||    
T  12811241 taaaattgtacgaagtgtacaaccactatctcc 12811273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 221
Target Start/End: Original strand, 19911762 - 19911979
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    |||||||||  || ||||||||||| || ||||||||| | |||||||  ||||| |||| ||| | | || ||| ||||||| |||||| ||  |||||    
T  19911762 atcagaagctgaagatcatcagaagttgtagttcatcaggagatgcaagacttaaagctttaaaggttgttcaatagattcaatctcgtccaagcattgc 19911861  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    | || ||  ||  ||||||||||||||||||||||||| ||||||| ||||||||||||  ||| |  ||| |||||||||| ||||   ||| || |||    
T  19911862 aaaagaccagagcagtgaagcaacgactattttgaaaggatttgaaagcattggatgcttattctttgaaagagcgttgacatagtataattgtacaaag 19911961  T
Q  204 tgtacaaccactacctcc 221  Q
    ||||||||||||||||||    
T  19911962 tgtacaaccactacctcc 19911979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 162
Target Start/End: Original strand, 14904252 - 14904396
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| |||||| || ||||||||| | |||||||  | ||| ||||||||||||||| || ||||| || ||||||||   ||||||||| |||||||||    
T  14904252 atcaccagaagttgtagttcatcaggagatgcaagacctaaagcttcaaaagctattcaaaggatttaatctcgtctaggcattgcagaagactggaaaa 14904351  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgct 162  Q
    ||||||||||| | |||||||||| |||||||  |||||||||||    
T  14904352 gtgaagcaacgtccattttgaaaggatttgaagacattggatgct 14904396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 55380505 - 55380303
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaag-ctatttaatggattcaacctcgtctaaagattgcagaatactggaaa 116  Q
    |||||||||||||| ||||||| | | |||||||  ||||| |||||||||| || || |||||||| || |  | ||||  ||||||||| ||  |||     
T  55380505 atcatcagaagctgaagttcattaggagatgcaagacttaaagcttcaaaaggctgttcaatggatttaatcatgcctaac-attgcagaagaccagaag 55380407  T
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||||| ||| ||   || |||||||||| |||||  ||| |||||||||||||||||||    
T  55380406 agtgaagcaacaactattttgaaaggatttgaaagcattggatgcttgtt-ctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccacta 55380308  T
Q  217 cctcc 221  Q
     ||||    
T  55380307 tctcc 55380303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 77 - 221
Target Start/End: Complemental strand, 10073091 - 10072948
Alignment:
Q  77 atggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaa 176  Q
    ||||||| || ||||| |||  || |||||| |||||||||||||||||||  ||| |||||||| ||||||| |||||||| ||| |||  || ||| |    
T  10073091 atggatttaatctcgtttaagcatagcagaagactggaaaagtgaagcaactgctagtttgaaaggatttgaaggcattggaggcttgttattc-aaaga 10072993  T
Q  177 gcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||   || ||||||||||||||||||| ||||    
T  10072992 gcgttgacaaagtacaaatgtacgaagtgtacaaccactatctcc 10072948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 134 - 221
Target Start/End: Complemental strand, 16853602 - 16853516
Alignment:
Q  134 tttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||| | ||||||| |||||||||||| |||||||||| | ||||||||||||||| | || | ||||||||||||||||||||||    
T  16853602 tttgaagggatttgaaagcattggatgcttgttcctcaaaga-gcgttgacaaagtacatctgtatgaagtgtacaaccactacctcc 16853516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 39419784 - 39419828
Alignment:
Q  173 aaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  39419784 aaaagcgttgacatagtacgtttgtacgaagtgtacaaccactac 39419828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 1672445 - 1672402
Alignment:
Q  178 cgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||| |||||||| ||||||||||||||||||||||||    
T  1672445 cgttgacaaaatacgtttgtacgaagtgtacaaccactacctcc 1672402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 1674920 - 1674877
Alignment:
Q  178 cgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||| |||||||| ||||||||||||||||||||||||    
T  1674920 cgttgacaaaatacgtttgtacgaagtgtacaaccactacctcc 1674877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 9751569 - 9751634
Alignment:
Q  151 gcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    ||||||||||||| ||| ||||| | ||||||||| |||| ||||| ||||||||||||||||||||    
T  9751569 gcattggatgctaattcttcaaaga-gcgttgacatagtatgtttgcacgaagtgtacaaccactac 9751634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 22190928 - 22190863
Alignment:
Q  151 gcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    ||||||||||||  ||| ||||| | ||||||||| |||||||||| ||||||||||||||||||||    
T  22190928 gcattggatgctgattcttcaaaga-gcgttgacatagtacgtttgtacgaagtgtacaaccactac 22190863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 3793348 - 3793287
Alignment:
Q  8 cagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaag 69  Q
    |||||||  |||||||  |||||||||||||||||| | |||||||||||| ||||||||||    
T  3793348 cagaagctgaaaatcactagaagctgcagttcatcaggagatgcaacttaaagcttcaaaag 3793287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 6641742 - 6641697
Alignment:
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||  ||| ||||||||||||||||||||||||    
T  6641742 agcgttgacaaagtacaattgtacgaagtgtacaaccactacctcc 6641697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 14571238 - 14571161
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaa 96  Q
    ||||| |||||| |||||||||||| | |||||||||||| |||||||||| | ||| | |||||||| |||| ||||    
T  14571238 aatcaccagaagttgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggattcaaactcgcctaa 14571161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 38513960 - 38513895
Alignment:
Q  151 gcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    |||||||||| || ||| ||||| | ||||||||| |||||| ||| ||||||||||||||||||||    
T  38513960 gcattggatgttaattcttcaaaga-gcgttgacatagtacgattgtacgaagtgtacaaccactac 38513895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 221
Target Start/End: Complemental strand, 40846217 - 40846112
Alignment:
Q  115 aaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccac 214  Q
    |||||||||||||||||| ||  || ||| ||||| |||||||||||| | |  |  || | |||||||||||||||  ||| |||||||||||||||||    
T  40846217 aaagtgaagcaacgactaattcaaatgaagttgaaagcattggatgcttgctttttgaaga-gcgttgacaaagtacaattgtacgaagtgtacaaccac 40846119  T
Q  215 tacctcc 221  Q
    || ||||    
T  40846118 tatctcc 40846112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 217
Target Start/End: Original strand, 3499705 - 3499746
Alignment:
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    |||||||||| ||||| |||| ||||||||||||||||||||    
T  3499705 agcgttgacatagtacatttgtacgaagtgtacaaccactac 3499746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 213
Target Start/End: Original strand, 15475050 - 15475233
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagt 119  Q
    |||| |||||||| |||||||||| |  ||  |||| || | |||||||||| ||| | |||||  | |||||||||||||||||||| | | |||||||    
T  15475050 atcaccagaagctacagttcatcaggaaattgaactcaaagtttcaaaagctgtttcaaggattttaactcgtctaaagattgcagaagagtagaaaagt 15475149  T
Q  120 gaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaacca 213  Q
       |||||| |||||||||         || ||||||||||||   ||||| ||| |||||||||| |||||||||  ||||||||||||||||    
T  15475150 atggcaacggctattttga---------aatgcattggatgcttactcctc-aaagagcgttgacatagtacgtttatacgaagtgtacaacca 15475233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 20977539 - 20977475
Alignment:
Q  151 gcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    ||||||||||||  ||||||||  | ||||||||| ||| |||||| |||||||||||||||||||    
T  20977539 gcattggatgcttattcctcaagga-gcgttgacatagtgcgtttgtacgaagtgtacaaccacta 20977475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 129; Significance: 6e-67; HSPs: 2)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 21 - 221
Target Start/End: Original strand, 548 - 747
Alignment:
Q  21 tcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtg 120  Q
    |||||||||| |||||||||||| | |||||||||||| |||||| ||||| ||| |||||||||| |||||||||||||||||||| ||||||||||||    
T  548 tcatcagaaggtgcagttcatcaggagatgcaacttaaagcttcagaagctgtttgatggattcaaactcgtctaaagattgcagaagactggaaaagtg 647  T
Q  121 aagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctc 220  Q
    ||||||||||||||||||||| ||||||| |||||||||||| |||| || ||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  648 aagcaacgactattttgaaaggatttgaaggcattggatgcttgttcttc-aaagagcgttgacaaagtacgtttgtactaagtgtacaaccactacctc 746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 25 - 221
Target Start/End: Original strand, 1662 - 1847
Alignment:
Q  25 cagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagc 124  Q
    |||||||| |||||||||| | |||||||||||| |||||||||| | ||| | |||||||| |||| || || ||||||||| |||||||||||   ||    
T  1662 cagaagctacagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggattcaaactcgcct-aacattgcagaagactggaaaagtatggc 1760  T
Q  125 aacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||| |||||||||         || ||||||||||||  ||| || ||| |||||||||| | |||||||| ||||||||||||||||||| ||||    
T  1761 aacggctattttga---------aatgcattggatgcttattcttc-aaagagcgttgacatattacgtttgtacgaagtgtacaaccactatctcc 1847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 78257 - 78456
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| ||||||||| ||||||||||| |||||| ||||| |||||||||||||||||  |||||||| |||||||||||||||||||| ||||||||||    
T  78257 aatcaccagaagctgtagttcatcatgagatgcagcttaaagcttcaaaagctatttatcggattcaaactcgtctaaagattgcagaagactggaaaag 78356  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||  || ||  ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  78357 tgaagcaacgactattttgaaaggatttgaaggcattggatgcttatt-ctttaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacc 78455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 6613 - 6832
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||  | ||||| ||||||||| ||||||||| | |||||||||||| |||||||||||| ||||| |||||||| || |||||| |||    
T  6613 agtttatcagaagctgagaatcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagctgtttaacggattcaaacttgtctaaggat 6712  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| ||||||||||||||||| ||||||||||||||  ||||||| |||||||||||| |||| || ||| ||| ||||||||||||||||| |||    
T  6713 tgcagaagactggaaaagtgaagcaccgactattttgaaaagatttgaaggcattggatgcttgttcttc-aaagagcattgacaaagtacgtttgtacg 6811  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  6812 aagtgtacaaccactacctcc 6832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 27 - 219
Target Start/End: Original strand, 1598 - 1789
Alignment:
Q  27 gaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaa 126  Q
    ||||||||||||||||| | ||||||||| || |||||||||||| |||||||||||||| ||||| |||| ||||||||| ||| ||||||||||||||    
T  1598 gaagctgcagttcatcaggagatgcaactcaaagcttcaaaagctgtttaatggattcaaactcgtttaaatattgcagaagacttgaaaagtgaagcaa 1697  T
Q  127 cgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacct 219  Q
    ||||||||||||||| ||||||| ||| |||||| | |||| || ||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  1698 cgactattttgaaaggatttgaaggcactggatgattgttcttc-aaagagcgttgacaaagtacgtttttacgaagtgtacaaccactacct 1789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 3542 - 3323
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||  ||||||| ||||||||  ||||||||| | |||||||||||| |||||||||||| ||||| |||||||| |||||||||||||    
T  3542 agtttatcagaagctgaaaatcaccagaagctatagttcatcaggagatgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaagat 3443  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| | |||||||||  | ||||| |||||||| ||| ||||||| |||||||||| |  ||| || ||| |||||||| | |||||||||| ||     
T  3442 tgcagaagattggaaaagtataacaacggctattttggaaggatttgaaggcattggatgtttattcttc-aaagagcgttgatatagtacgtttgtaca 3344  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||    
T  3343 aagtgtacaaccactacctcc 3323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 9392 - 9174
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||  | ||||| |||||| || ||||||||| | |||||||||||| |||||||||||| ||||| |||||||| ||| || ||||||    
T  9392 agtttatcagaagctgagaatcaccagaagttgtagttcatcaggagatgcaacttaaagcttcaaaagctgtttaacggattcaaactcatc-aaagat 9294  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| | |||||||||  |||||||||||||||| ||| ||| ||| ||||||||||||  ||| || ||| |||||||||| |||||||||| |||    
T  9293 tgcagaagattggaaaagtatagcaacgactattttggaaggattagaaggcattggatgcttattcttc-aaagagcgttgacatagtacgtttgtacg 9195  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||| ||||    
T  9194 aagtgtacaaccactatctcc 9174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 7047 - 7248
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| ||||||||| ||||||||| | |||||||||||| |||||||||||| ||| | |||||||| | ||||| |||||||||||| ||||||||||    
T  7047 aatcaccagaagctgtagttcatcaggagatgcaacttaaagcttcaaaagctgtttgaaggattcaaacccgtctgaagattgcagaagactggaaaag 7146  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    |  |||||||||||||||| ||| ||| ||| ||||||||||||  ||| ||||| || ||||||||  ||||||||| ||||||||||||||||||| |    
T  7147 tatagcaacgactattttggaaggattggaaagcattggatgcttattcttcaaacaa-cgttgacatggtacgtttgtacgaagtgtacaaccactatc 7245  T
Q  219 tcc 221  Q
    |||    
T  7246 tcc 7248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 5472 - 5694
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcag---ttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaa 97  Q
    ||||||||||||||  | ||||| |||||||||| |   |||||||   ||||||| |||| | |||||||| | |||||||||||||| ||||||||||    
T  5472 agtttatcagaagctgagaatcaccagaagctgctgctgttcatcagaagatgcaatttaaagattcaaaagttgtttaatggattcaaactcgtctaaa 5571  T
Q  98 gattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttga 197  Q
    |||||||||| ||||||||||| ||||||| ||||||||||||| ||||||| ||||| ||||||  ||| || ||| |||||||||||||||| |||      
T  5572 gattgcagaagactggaaaagtaaagcaacaactattttgaaaggatttgaaggcatttgatgcttattcttc-aaagagcgttgacaaagtacatttat 5670  T
Q  198 acgaagtgtacaaccactacctcc 221  Q
    | ||||||||||||||||||||||    
T  5671 atgaagtgtacaaccactacctcc 5694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 87; Significance: 7e-42; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 211614 - 211417
Alignment:
Q  23 atcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaa 122  Q
    ||||||||||| || |||||| | |||||| ||||| |||||||||| | ||||| |||||||| |||||||||||||||||||| |||||||||||  |    
T  211614 atcagaagctgtagctcatcaggagatgcagcttaaagcttcaaaagttgtttaacggattcaaactcgtctaaagattgcagaagactggaaaagtata 211515  T
Q  123 gcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||| ||| |||| || ||||| ||||||  ||| || ||| |||||||||| |||||||||| ||||||| |||||| |||||||||    
T  211514 gcaacgactattttgtaaggattttaatgcatttgatgcttattcttc-aaagagcgttgacatagtacgtttgtacgaagtatacaactactacctcc 211417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 221
Target Start/End: Original strand, 377435 - 377651
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    |||||||||  || |||| |||||| |  ||||||||| | |||||||  |||||  ||||||| | | || |||||||| || |||||||||  |||||    
T  377435 atcagaagctgaagatcaccagaagttatagttcatcaggagatgcaagacttaaaacttcaaatgttgttgaatggatttaatctcgtctaagcattgc 377534  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| || |||| ||||||||||||||||| ||||||| ||||||| |||||||||||| |||| |  || | || ||||||||||||  ||| || |||    
T  377535 agaagaccggaagagtgaagcaacgactatattgaaaggatttgaaggcattggatgcttgttctttgaaga-gcattgacaaagtacaattgtaccaag 377633  T
Q  204 tgtacaaccactacctcc 221  Q
    ||||||||||||| ||||    
T  377634 tgtacaaccactatctcc 377651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 220472 - 220257
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    |||||||||  || |||| ||||||||| ||||||||| | ||||  |  ||||| |||||||| ||| || | ||| || || |||||||||  |||||    
T  220472 atcagaagctgaagatcaccagaagctgaagttcatcaggagatgagagacttaaagcttcaaaggctgttcattggttttaatctcgtctaagcattgc 220373  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| ||  | | |||||||||||| ||| ||  || ||||||||| |||||||||||| |||  |  || | |||||||||||||||  ||| ||||||    
T  220372 agaagaccaggagagtgaagcaacggctaattcaaatgaatttgaa-gcattggatgcttgttatttgaaga-gcgttgacaaagtacaattgtacgaag 220275  T
Q  204 tgtacaaccactacctcc 221  Q
    |||| |||||||||||||    
T  220274 tgtataaccactacctcc 220257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 244256 - 244376
Alignment:
Q  100 ttgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaac 199  Q
    |||||||| ||  ||| ||||||||||| |||| ||  |||| |||||||  ||||||||||| |||| |  || | ||||||| |||| ||  ||| ||    
T  244256 ttgcagaagaccagaagagtgaagcaacaactaattcaaaaggatttgaagacattggatgcttgttctttgaaga-gcgttgaaaaaggacaattgtac 244354  T
Q  200 gaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||||||||    
T  244355 gaagtgtacaaccactacctcc 244376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 61041 - 60822
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||||||||||||   | ||||| |||||| || ||||||||| | ||||||||||||  ||||||||| | ||||| ||||| || |||||||||| ||    
T  61041 agtttatcagaagttgagaatcaccagaagttgtagttcatcaggagatgcaacttaaaacttcaaaagttgtttaaaggatttaaactcgtctaaaaat 60942  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| |||||||||||  ||||||| |||||||| ||| ||| ||| |||||| ||||| |||| || ||| |||||||||| |||||||||| |||    
T  60941 tgcagaagactggaaaagtatagcaacggctattttggaaggattggaaggcattgaatgcttgttcttc-aaagagcgttgacatagtacgtttgtacg 60843  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||| ||||    
T  60842 aagtgtacaaccactatctcc 60822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 89928 - 90147
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||| |||||||||  ||||||| ||||||||||||||||||| | |||||||||||| |||||||| | |  | |||| ||| || |||||||||  ||    
T  89928 agttcatcagaagctgaaaatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaggttgatcaatgtatttaatctcgtctaagtat 90027  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    | ||||| ||||||| |||||| ||||| |||||||||||| ||||||| |||||||||||| |||| || ||| |||||||||||| |||   || |||    
T  90028 tacagaagactggaagagtgaaccaacggctattttgaaaggatttgaaggcattggatgcttgttcttc-aaagagcgttgacaaaatacaagtgtacg 90126  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||| ||||||||    
T  90127 aagtgtacaacccctacctcc 90147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 22916 - 22695
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaag 98  Q
    |||| |||||||||  || |||| |||| |||| ||||||||| | |||||||  ||||| |||||||| | | || |||||||| || |||||||||      
T  22916 agttcatcagaagctgaagatcaccagaggctgtagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagc 22817  T
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||  ||| || ||| || |||||||||||||  ||| |    
T  22816 attgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttattcttc-aaagagtgttgacaaagtacaattgta 22718  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
     |||| |||||||||||||||||    
T  22717 tgaagcgtacaaccactacctcc 22695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 8151 - 7963
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| |||||||||||||||||||   |||| ||||||| |||||||||||| ||| | |||||||| ||||||| |||||||||||| ||||||||||    
T  8151 aatcaccagaagctgcagttcatcagaagatgtaacttaaagcttcaaaagctgtttcaaggattcaaactcgtct-aagattgcagaagactggaaaag 8053  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtaca 209  Q
    |  |||||||||||||||||||| |||  |  ||||| ||||||  ||| || ||| |||||||||| |||||||||| ||||||||||||    
T  8052 tatagcaacgactattttgaaaggattgaattgcattcgatgcttattcttc-aaagagcgttgacatagtacgtttgtacgaagtgtaca 7963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 88 - 1
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaa 107  Q
    ||||| |||||||||||||||||||   |||| ||||||| |||||||||||| ||| | |||||||| ||||||| ||||||||||||    
T  88 aatcaccagaagctgcagttcatcagaagatgtaacttaaagcttcaaaagctgtttcaaggattcaaactcgtct-aagattgcagaa 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 99081 - 99297
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||  || |||| |||||| || ||||||||| |   |||||||||| |||||||||||| ||||| |||||||| ||||||||||| |    
T  99081 agtttatcagaagctgaagatcaccagaagttgtagttcatcaggaagtgcaacttaaagcttcaaaagctgtttaacggattcaaactcgtctaaag-t 99179  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||  || ||||||||  |||||||||||||||| ||| |||  || ||||||||||||  ||| ||   |||||| ||||| |||||||||| |||    
T  99180 tgcagatgaccggaaaagtatagcaacgactattttggaaggattacaaggcattggatgcttattcttc---aaagcgctgacatagtacgtttgtacg 99276  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||| ||||    
T  99277 aagtgtacaaccactatctcc 99297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 53 - 216
Target Start/End: Original strand, 19397 - 19559
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||||| | || |||||||| ||  ||| ||||  ||||||||| ||| ||| ||||||||||| ||||||||||||| |||| || ||    
T  19397 acttaaagcttcaaaagttgttcaatggatttaatttcgcctaagaattgcagaagactagaagagtgaagcaacaactattttgaaaggatttaaaagc 19496  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    |||||||||| ||| ||   || |||||||||| | |||  ||| |||||||||||||||||||    
T  19497 attggatgcttgtt-ctttgaagagcgttgacataatacaattgtacgaagtgtacaaccacta 19559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 72; Significance: 6e-33; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 65320 - 65462
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| ||||||||||||||||||| | |||||||||||| |||||||||||||||| | |||||||| ||||||| |||||||||||| ||||||||||    
T  65320 aatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagctatttcaaggattcaaactcgtct-aagattgcagaagactggaaaag 65418  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgct 162  Q
    |  || ||||||||||||||||| |||  |  ||||||||||||    
T  65419 tatagaaacgactattttgaaaggattaaagggcattggatgct 65462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 144365 - 144507
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| ||||||||||||||||||| | |||||||||||| |||||||||||||||| | |||||||| ||||||| |||||||||||| ||||||||||    
T  144365 aatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagctatttcaaggattcaaactcgtct-aagattgcagaagactggaaaag 144463  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgct 162  Q
    |  |||||||||| ||||||||| |||  |  ||||||||||||    
T  144464 tatagcaacgactgttttgaaaggattaaagggcattggatgct 144507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 26 - 221
Target Start/End: Original strand, 164843 - 165038
Alignment:
Q  26 agaagctgcagttcatcatgggatgcaacttaaggcttcaaa-agctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagc 124  Q
    |||| ||| |||||||||   |||||||| ||| | |||||| |||| |||||||||||||| ||||||||||||  ||  || |||| |  |  | |||    
T  164843 agaaactgtagttcatcagtagatgcaacctaaagtttcaaatagctgtttaatggattcaaactcgtctaaagaaagcgaaagactgtagtatagtagc 164942  T
Q  125 aacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||| |||| |||||||| ||||||| ||||||||||||  | | ||||| | ||||||||||||||||| || ||||||||||| ||||||||||||    
T  164943 aacaactaatttgaaaggatttgaaggcattggatgcttatccttcaaaga-gcgttgacaaagtacgtctgtacgaagtgtacgaccactacctcc 165038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 9779 - 9579
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| ||||||||||||||||||| | |||||||||||| |||||||||| | ||| | |||||||| || |||| |||||||||||| ||||| ||||    
T  9779 aatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggattcaaacttgtct-aagattgcagaagactgggaaag 9681  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    |  |||||||||||||||||||| |||  |  ||||||||||||  || ||  ||| |||||||||| ||||||  || ||||||||||||||||||| |    
T  9680 tatagcaacgactattttgaaaggattgaagggcattggatgcttatt-ctacaaacagcgttgacatagtacgactgtacgaagtgtacaaccactatc 9582  T
Q  219 tcc 221  Q
    |||    
T  9581 tcc 9579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 22004 - 22223
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    ||||||||||||||    ||||| |||||| || ||||||| |   |||||||||||| | |||||||| | ||||| ||||| || |||||||||||||    
T  22004 agtttatcagaagctgtgaatcaccagaagttgtagttcattagaagatgcaacttaaaggttcaaaagttgtttaaaggattaaaactcgtctaaagat 22103  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacg 200  Q
    ||||||| |||||| ||||  |||||||||||| ||  ||| ||| ||| ||||||||||||  ||| || ||  |||||||||| | |||||||| |||    
T  22104 tgcagaagactggagaagtatagcaacgactatctttgaaggattggaaggcattggatgcttattcttc-aatgagcgttgacataatacgtttgtacg 22202  T
Q  201 aagtgtacaaccactacctcc 221  Q
    |||||||||||||||| ||||    
T  22203 aagtgtacaaccactatctcc 22223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 19217 - 19050
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||| ||| ||| || |||||||| || |||||| ||  ||||||||| ||||||| |||||||||||| |||||||| ||| |||| || ||    
T  19217 acttaaagcttgaaaggctgttcaatggatttaatctcgtcaaagcattgcagaagactggaagagtgaagcaacggctattttggaaggatttaaaggc 19118  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||| |||||| |||| || ||| |||||||  |||||||   || ||||||||||||||||||||||||    
T  19117 atttgatgcttgttcttc-aaagagcgttggaaaagtacaagtgtacgaagtgtacaaccactacctcc 19050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 12395 - 12228
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| ||| || |||| ||| || |||||||||  ||||||||| ||||||| ||||||||||| ||||||||||||||||||||| ||    
T  12395 acttaaagcttcaaaggctgttcaatgaatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacaactattttgaaagaatttgaaagc 12296  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||  || ||   || ||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  12295 attggatgcttatt-ctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctcc 12228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 18511 - 18713
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaac--ttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| ||||||||||||||||||| | ||  |||   |||| |||||||| ||| || |||||||| || |||||||||  ||||||||| ||||||| |    
T  18511 atcaccagaagctgcagttcatcaggagacacaagatttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactggaaga 18610  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    |||||||||||||||||||||||| ||||||| ||||||||| || ||| ||   || ||||||||||||||||  ||  |||||||||||||||||||     
T  18611 gtgaagcaacgactattttgaaaggatttgaaggcattggatacttgtt-ctttgaagagcgttgacaaagtacaattttacgaagtgtacaaccactat 18709  T
Q  218 ctcc 221  Q
    ||||    
T  18710 ctcc 18713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 221
Target Start/End: Original strand, 9994 - 10200
Alignment:
Q  17 aaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctattt-aatggattcaacctcgtctaaagattgcagaatactgg 113  Q
    ||||||| ||||||||| ||||||||| | |||||||  ||||| |||||||||| |  || |||||||| || ||| |||||   |||||||| ||| |    
T  9994 aaaatcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaaggttgttcaatggatttaatctcatctaagctttgcagaagactag 10093  T
Q  114 aaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaacca 213  Q
    || ||||||||||||||||||||||||| ||||||| |||||||||||| |||  |  ||| ||||||||||||||||  ||| ||||||||||| ||||    
T  10094 aagagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgtt-ttttaaagagcgttgacaaagtacaattgtacgaagtgtacgacca 10192  T
Q  214 ctacctcc 221  Q
    ||||||||    
T  10193 ctacctcc 10200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 14819 - 14864
Alignment:
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||  ||| ||||||||||| ||||||||||||    
T  14819 agcgttgacaaagtacaattgtacgaagtgtacgaccactacctcc 14864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 32725 - 32504
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaag 98  Q
    |||| ||||||||| ||| |||| || ||  || ||||||||| | |||||||  ||||| ||||||||  || || |||||||| || |||||||||      
T  32725 agttcatcagaagctaaagatcaccacaacttgtagttcatcaggagatgcaagacttaaagcttcaaagactgttcaatggatttaatctcgtctaagc 32626  T
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||| ||||||| ||||| |||||| ||| ||   || ||||||||||||||||  ||| |    
T  32625 attgcagaagactggaagagtgaagtaacgactattttgaaaggatttgaatgcatttgatgcttgtt-ctttgaagagcgttgacaaagtacaattgta 32527  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||| ||||    
T  32526 cgaagtgtacaaccactatctcc 32504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 221
Target Start/End: Complemental strand, 49567 - 49351
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    |||||||||  || |||| |||||| || ||||||||| | |||||||  ||||| ||||||||   | || |||||||| || |||||||||  |||||    
T  49567 atcagaagctgaagatcaccagaagttgtagttcatcaggagatgcaagtcttaaagcttcaaagtttgttcaatggatttaatctcgtctaagcattgc 49468  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| | | ||| ||||||||||| ||||||||||||| ||||||| |||||||||||| ||| ||   || ||||||||||||||||  ||| ||||||    
T  49467 agaagatttgaagagtgaagcaactactattttgaaaggatttgaaggcattggatgcttgtt-ctttgaagagcgttgacaaagtacaattgtacgaag 49369  T
Q  204 tgtacaaccactacctcc 221  Q
    |||||||| |||| ||||    
T  49368 tgtacaacaactatctcc 49351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 339 - 437
Alignment:
Q  122 agcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||| ||| |||||||| ||||||| ||||||||||||  | | ||||| | ||||||||||||||||| || ||||||||||| ||||||||||||    
T  339 agcaacggctaatttgaaaggatttgaaggcattggatgcttatccttcaaaga-gcgttgacaaagtacgtctgtacgaagtgtacgaccactacctcc 437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 66; Significance: 2e-29; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 26 - 220
Target Start/End: Original strand, 36671 - 36866
Alignment:
Q  26 agaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaag 123  Q
    |||||||| ||||||||| | |||||||  ||||| |||||||| |||  | |||| ||| || |||||||||  ||||||||  ||| |||||||||||    
T  36671 agaagctgaagttcatcaagagatgcaagacttaaagcttcaaaggctgctcaatgaatttaatctcgtctaagcattgcagatgactagaaaagtgaag 36770  T
Q  124 caacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctc 220  Q
    ||||||||| |||||||| ||||||| |||||||||||| ||| ||  ||| || |||||||||| ||  ||| |||||||||||||||||||||||    
T  36771 caacgactaatttgaaaggatttgaaggcattggatgcttgtt-ctttaaagagtgttgacaaagaacaattgtacgaagtgtacaaccactacctc 36866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 26 - 220
Target Start/End: Complemental strand, 42334 - 42139
Alignment:
Q  26 agaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaag 123  Q
    |||||||| ||||||||| | |||||||  ||||| |||||||| |||  | |||| ||| || |||||||||  ||||||||  ||| |||||||||||    
T  42334 agaagctgaagttcatcaagagatgcaagacttaaagcttcaaaggctgctcaatgaatttaatctcgtctaagcattgcagatgactagaaaagtgaag 42235  T
Q  124 caacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctc 220  Q
    ||||||||| |||||||| ||||||| |||||||||||| ||| ||  ||| || |||||||||| ||  ||| |||||||||||||||||||||||    
T  42234 caacgactaatttgaaaggatttgaaggcattggatgcttgtt-ctttaaagagtgttgacaaagaacaattgtacgaagtgtacaaccactacctc 42139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 66; Significance: 2e-29; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 212541 - 212373
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgacta-ttttgaaagaatttgaacg 151  Q
    |||||| |||||||| ||||||  |||||||||| |||||||||  ||||||||| ||| ||| ||||||||||| |||| |||| |||| ||||||| |    
T  212541 acttaaagcttcaaaggctattctatggattcaatctcgtctaagcattgcagaagactagaagagtgaagcaacaactatttttaaaaggatttgaaag 212442  T
Q  152 cattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||| ||| ||   || ||||||||||||||||  ||| ||||||||||||||||||||||||    
T  212441 cattggatgcttgtt-ctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctcc 212373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 6123 - 6237
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| | | || ||| ||||||| |||||||||  ||||||||| ||||||| ||||||||||||||||||||||||| ||||||| ||    
T  6123 acttaaagcttcaaaggatgttcaatagattcaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttgaaaggatttgaaagc 6222  T
Q  153 attggatgctagttc 167  Q
    |||||||||| ||||    
T  6223 attggatgcttgttc 6237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 246138 - 246215
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaa 96  Q
    ||||| |||||| |||||||||||| | |||||||||||| |||||||||| | ||| | |||||||| |||| ||||    
T  246138 aatcaccagaagttgcagttcatcaggagatgcaacttaaagcttcaaaagttgtttcaaggattcaaactcgcctaa 246215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 14834 - 14667
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| | | || |||||||| || |||||||||  ||||||||| ||||||| ||||||||||| ||||||||||||| ||||||| ||    
T  14834 acttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacaactattttgaaaggatttgaaggc 14735  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||| | | ||   || ||||||||||||||||  ||  ||||||||||||||||||||||||    
T  14734 attggatgcttg-tactttgaagagcgttgacaaagtacaattttacgaagtgtacaaccactacctcc 14667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 1881 - 1679
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| ||||||||| ||||||||| | |||||||  ||||| |||||||| | | || ||||||||||| |||||||||   |||||||| ||| ||| |    
T  1881 atcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggattcaatctcgtctaagctttgcagaagactagaaga 1782  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    ||||| |||||||||||||||||| ||||||| ||||||||||||   | ||   || ||||||||||||||||  ||| | ||||||||||||||||||    
T  1781 gtgaaacaacgactattttgaaaggatttgaaagcattggatgcttact-ctttgaagagcgttgacaaagtacaattgtaggaagtgtacaaccactac 1683  T
Q  218 ctcc 221  Q
    ||||    
T  1682 ctcc 1679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 1876 - 1709
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| | | || |||||||| || |||||||||  ||||||||| ||||||  ||||||||||| ||||||||||||| ||||||| ||    
T  1876 acttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaggagtgaagcaacaactattttgaaaggatttgaaggc 1777  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||| | | ||   || ||||||||||||||||  ||| ||||||||||||||||||||||||    
T  1776 attggatgcttg-tactttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctcc 1709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 7943 - 7722
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaag 98  Q
    |||| |||||||||  || |||| ||||||||  | ||||||| | |||||||  ||||| |||||||| ||| || |||||||| || |||||||||      
T  7943 agttcatcagaagctgaagatcaccagaagctctatttcatcaggagatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtctaagc 7844  T
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaa 198  Q
    |||||| || ||||||| |||||||| |||||||||||| ||| |||| || |||||| ||| |  ||| || ||| ||||||||||||||||  ||| |    
T  7843 attgcaaaagactggaagagtgaagccacgactattttggaaggatttaaaggcattgtatgtttattcttc-aaagagcgttgacaaagtacaattgta 7745  T
Q  199 cgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||||||||||    
T  7744 cgaagtgtacaaccactacctcc 7722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 53 - 216
Target Start/End: Complemental strand, 60202 - 60040
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| | | || |||||||| || |||||| ||  ||||||||| ||||||||||||||||||||||||||||||||| |||||||  |    
T  60202 acttaaagcttcaaaggatgttcaatggatttaatctcgtccaagaattgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaagcc 60103  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    |||||||||| ||| ||   || |||||||||| |||||  ||| |||||||||||||||||||    
T  60102 attggatgcttgtt-ctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccacta 60040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 25 - 221
Target Start/End: Complemental strand, 8142 - 7945
Alignment:
Q  25 cagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaa 122  Q
    ||||||||  ||||||||| | |||||||  ||||| |||||||| | | || |||||||| || |||||| ||  |||| |||| |||| |||||||||    
T  8142 cagaagctaaagttcatcaggagatgcaaaacttaaagcttcaaaggttgttcaatggatttaatctcgtccaagcattgtagaagactgtaaaagtgaa 8043  T
Q  123 gcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||||| |||||||  ||||||||||| ||| ||   || |||||||||| |||||  ||| ||||||||||||||||||| ||||    
T  8042 gcaacgactattttgaaaggatttgaattcattggatgcttgtt-ctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctcc 7945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 221
Target Start/End: Complemental strand, 10184 - 9988
Alignment:
Q  26 agaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaag 123  Q
    ||||| || ||||||||| | |||||||  ||||| |||||||| |||||| ||||||||||| |||||||||   |||||||| ||| ||| |||||||    
T  10184 agaagttgaagttcatcaggagatgcaagacttaaagcttcaaaggctattcaatggattcaatctcgtctaagctttgcagaagactagaagagtgaag 10085  T
Q  124 caacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
     ||||||||||||||||| ||||||| ||||||||||||   | ||   || |||||| |||||||||  ||| || |||||||||||||||||||||    
T  10084 taacgactattttgaaaggatttgaaagcattggatgcttact-ctttgaagagcgttcacaaagtacaattgtacaaagtgtacaaccactacctcc 9988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 4872 - 5039
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| ||| || |||||||| || |||||||||  |||| |||| |||| || |||||||| |||||||||||||||| ||||||| ||    
T  4872 acttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgtagaagactgaaagagtgaagcgacgactattttgaaaggatttgaaggc 4971  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||| | ||| ||  | | ||||||||||||||||  ||| | ||||||||||||||||||||||    
T  4972 attggatgtttgtt-ctttatagagcgttgacaaagtacaattgtatgaagtgtacaaccactacctcc 5039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 27319 - 27521
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| |||| |||| ||||||||| | |||||||  ||||| |||||||| | | || |||| ||| || |||||||||  ||||||||| |||| || |    
T  27319 atcaccagatgctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatgaatttaatctcgtctaagcattgcagaagactgaaaga 27418  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    ||||||||||  ||||||||| || ||| ||| |||||||||||| | || || ||| ||||||||||||||||  ||| ||||||||||||||||||||    
T  27419 gtgaagcaacagctattttgataggattcgaaggcattggatgcttgctcttc-aaagagcgttgacaaagtaccattgtacgaagtgtacaaccactac 27517  T
Q  218 ctcc 221  Q
    ||||    
T  27518 ctcc 27521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 25 - 221
Target Start/End: Complemental strand, 103788 - 103591
Alignment:
Q  25 cagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaa 122  Q
    ||||||||| ||||||||| | |||||||  ||||| |||| ||| | | || |||| ||| ||  | ||||||| ||||||||| ||||||| ||||||    
T  103788 cagaagctgaagttcatcaggagatgcaagacttaaagcttgaaaggttgttaaatgaatttaattttgtctaaacattgcagaagactggaagagtgaa 103689  T
Q  123 gcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||| |||||||||||  || | || |||||||||||| |||| || ||| ||||||||||||||||  ||| ||||||||| ||||||||||||||    
T  103688 gcaacggctattttgaaatgatattaaggcattggatgcttgttcttc-aaagagcgttgacaaagtacaattgtacgaagtgtgcaaccactacctcc 103591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 213
Target Start/End: Complemental strand, 710 - 502
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    |||||||||  || |||| ||||||||  || |||||| | |||||||  ||||| || ||||| | | || ||| |||| || |||||||||  |||||    
T  710 atcagaagctgaagatcaccagaagctaaagctcatcaggagatgcaagacttaaagcgtcaaaggatgttcaattgatttaatctcgtctaagcattgc 611  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    |||| ||||||| ||||||||||||||||||||||||| ||||||| |||||||||||| ||| ||   || |||||||||| |||||  ||| ||||||    
T  610 agaagactggaatagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgtt-ctttgaagagcgttgacatagtacaattgtacgaag 512  T
Q  204 tgtacaacca 213  Q
    ||||||||||    
T  511 tgtacaacca 502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 30410 - 30296
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| | | || ||| ||||||| |||||||||  ||||||||| ||||||| ||||||||||||||||||||||||| ||||||| ||    
T  30410 acttaaagcttcaaaggatgttcaatagattcaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttgaaaggatttgaaagc 30311  T
Q  153 attggatgctagttc 167  Q
    |||||||||| ||||    
T  30310 attggatgcttgttc 30296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 9967 - 9922
Alignment:
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||  ||| |||||||||| |||||||||||||    
T  9967 agcgttgacaaagtacaattgtacgaagtgtaaaaccactacctcc 9922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 6 - 216
Target Start/End: Original strand, 25851 - 26062
Alignment:
Q  6 atcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgc 103  Q
    |||||||||  || |||| ||||||||  || |||||| | |||||||  ||||| || ||||| | | || |||||||| || |||||||||  |||||    
T  25851 atcagaagctgaagatcaccagaagctaaagctcatcaggagatgcaagacttaaagcgtcaaaggttgttcaatggatttaatctcgtctaagcattgc 25950  T
Q  104 agaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaag 203  Q
    | || ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||| ||   || || ||||||| |||||  ||| | ||||    
T  25951 aaaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgtt-ctttgaagagggttgacatagtacaattgtatgaag 26049  T
Q  204 tgtacaaccacta 216  Q
    |||||||||||||    
T  26050 tgtacaaccacta 26062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 44652 - 44743
Alignment:
Q  76 aatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttc 167  Q
    |||||||| || |||||||||  |||| |||| |||||||||||||||||||| |||||||||||| ||||||| ||||| |||||| ||||    
T  44652 aatggatttaatctcgtctaagtattgtagaagactggaaaagtgaagcaacgtctattttgaaaggatttgaaggcattagatgcttgttc 44743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 15303 - 15136
Alignment:
Q  53 acttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgc 152  Q
    |||||| |||||||| |||  | |||||||| || |||||||||  ||||||||| ||  ||| ||||||||| ||||||||||||||| ||||||| ||    
T  15303 acttaaagcttcaaaggctgatcaatggatttaatctcgtctaagcattgcagaagaccagaagagtgaagcatcgactattttgaaaggatttgaaagc 15204  T
Q  153 attggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||| | ||| ||   || ||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  15203 attggatgattgtt-ctttgaatagcgttgacaaagtacaattgtacgaagtgtacaaccactatctcc 15136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 23454 - 23551
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    ||||| ||||||||||||||||||| | |||||||||||| |||||||||||| ||| | |||||||| ||||||| |||||||||||| |||||||||    
T  23454 aatcaccagaagctgcagttcatcaggagatgcaacttaaagcttcaaaagctgtttcaaggattcaaactcgtct-aagattgcagaagactggaaaa 23551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 221
Target Start/End: Original strand, 25384 - 25491
Alignment:
Q  113 gaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaacc 212  Q
    |||||||  |||||||||||||||||||| |||  |  |||||||||  |  ||| ||||| | | ||||||| |||||||||| |||||||||||||||    
T  25384 gaaaagtatagcaacgactattttgaaaggattgaagggcattggatagttattcttcaaaga-gtgttgacatagtacgtttgtacgaagtgtacaacc 25482  T
Q  213 actacctcc 221  Q
    |||| ||||    
T  25483 actatctcc 25491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 25566 - 25757
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagt 119  Q
    |||| ||||||||||||||||||| | |||||||||||| | |||||||| | ||| | |||||||| |||| ||| | |||||| || |||||||||||    
T  25566 atcaccagaagctgcagttcatcaggagatgcaacttaaagtttcaaaagttgtttcaaggattcaaactcgcctagaaattgcaaaagactggaaaagt 25665  T
Q  120 gaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacct 219  Q
       |||||   ||||||||||          ||||||||||||  ||| |||||| |||||||||| |||||||||| ||||||||||||||||||||||    
T  25666 atggcaacagatattttgaaat---------gcattggatgcttattcttcaaaa-agcgttgacatagtacgtttgtacgaagtgtacaaccactacct 25755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 221
Target Start/End: Original strand, 34711 - 34896
Alignment:
Q  26 agaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagca 125  Q
    |||||||||||||| ||| | |||||||||||| | |||||||| | ||| | |||||||| |||| ||| | ||||||||| |||||||||||   |||    
T  34711 agaagctgcagttcttcaggagatgcaacttaaagtttcaaaagttgtttcaaggattcaaactcgcctagaaattgcagaagactggaaaagtatggca 34810  T
Q  126 acgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||| ||||||||         || ||||||||||||  ||| || ||| |||||||||| |||||||||| | ||||||||||||||||||||||    
T  34811 acgaatattttga---------aatgcattggatgcttattcttc-aaagagcgttgacatagtacgtttgtatgaagtgtacaaccactacctcc 34896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 17666 - 17857
Alignment:
Q  19 aatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaag 118  Q
    ||||| |||||||| || ||||||| | ||| |||||||| |||||||||||| ||| | |||||||| ||||||| |||||||||||| |||  |||||    
T  17666 aatcaccagaagcttcaattcatcaggagatacaacttaaagcttcaaaagctgtttcaaggattcaaactcgtct-aagattgcagaagactacaaaag 17764  T
Q  119 tgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacc 218  Q
    |  ||||||| ||||||||||||         ||||||||||||   ||||  ||| |||||||||| |||||||||| | ||||||||||||||||| |    
T  17765 tatagcaacgtctattttgaaag---------gcattggatgct-tatccttcaaagagcgttgacatagtacgtttgtatgaagtgtacaaccactatc 17854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 76 - 221
Target Start/End: Complemental strand, 13734 - 13590
Alignment:
Q  76 aatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaa 175  Q
    |||||||| || |||||||||  ||||||||| | ||||| ||||||||||| ||||||||||||| ||||||| |||||||||| | ||| ||   ||     
T  13734 aatggatttaatctcgtctaagcattgcagaagattggaatagtgaagcaacaactattttgaaaggatttgaaggcattggatgtttgtt-ctttgaag 13636  T
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||| |||||  ||| || |||||||||||||||| ||||    
T  13635 agcgttgacatagtacaattgtacaaagtgtacaaccactatctcc 13590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 35 - 221
Target Start/End: Original strand, 20876 - 21063
Alignment:
Q  35 agttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgacta 132  Q
    ||||||||| | |||||||  ||||| |||||||| | | || ||| |||| || |||||||||  ||||||||| ||| ||| ||||||||||||   |    
T  20876 agttcatcaagagatgcaagacttaaagcttcaaaggttgttcaattgatttaatctcgtctaagcattgcagaagactagaagagtgaagcaacggtca 20975  T
Q  133 ttttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||| ||||||| ||||||||||||  ||| || ||| ||||| ||| ||||||  ||| ||||||||||||||||||| ||||    
T  20976 ttttgaaaggatttgaaggcattggatgcttattcttc-aaagagcgtcgaccaagtacaattgtacgaagtgtacaaccactatctcc 21063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 60 - 173
Target Start/End: Complemental strand, 143267 - 143154
Alignment:
Q  60 gcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggat 159  Q
    |||| ||| |||||| |||||||| || |||||| ||  ||||||||| ||||||| ||||||||||||||||||||| ||| |||| || |||||||||    
T  143267 gcttgaaaggctattcaatggatttaatctcgtcaaagcattgcagaagactggaagagtgaagcaacgactattttggaaggatttaaaggcattggat 143168  T
Q  160 gctagttcctcaaa 173  Q
    ||| |||| |||||    
T  143167 gcttgttcttcaaa 143154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 2585 - 2723
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagat 100  Q
    |||| |||||||||   |||||| ||||| ||||||||||||| |  ||||||| ||| | |||||||||| ||| | |||||||| |||| ||||| ||    
T  2585 agttcatcagaagctgtaaatcaccagaaactgcagttcatcaggaaatgcaacctaaagtttcaaaagctgtttcaaggattcaaactcgcctaaa-at 2683  T
Q  101 tgcagaatactggaaaagtgaagcaacgactattttgaaa 140  Q
    ||||||| |||||||||||  ||||||| |||||||||||    
T  2684 tgcagaagactggaaaagtatagcaacggctattttgaaa 2723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 2738 - 2783
Alignment:
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||| |||||||||| | ||||||||||||||||| ||||    
T  2738 agcgttgacatagtacgtttgtatgaagtgtacaaccactaactcc 2783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 167
Target Start/End: Original strand, 676 - 825
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    |||| ||||||||  ||||||||| | |||||||  |||||  |||||||  || || |||| ||| || |||||||||  ||||||||| ||||||| |    
T  676 atcaccagaagctaaagttcatcaggagatgcaagacttaaaacttcaaagactgttcaatgaatttaatctcgtctaagcattgcagaagactggaata 775  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttc 167  Q
    ||||||||  |||||||||||||| ||||||| |||||||||||| ||||    
T  776 gtgaagcactgactattttgaaaggatttgaaggcattggatgcttgttc 825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 221
Target Start/End: Original strand, 5587 - 5782
Alignment:
Q  27 gaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagc 124  Q
    ||||||| ||||||||| | |||||||  ||||  |||||||| | | || |||||||| || |||||| ||  |||| |||| | ||||| |||| |||    
T  5587 gaagctgaagttcatcaggagatgcaagacttagagcttcaaaggttgttcaatggatttaatctcgtccaagtattgtagaagattggaagagtggagc 5686  T
Q  125 aacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||  |||||||||||| || |||| |||||||||||| ||| ||   || ||||||||||||||||  ||| |||||||||||||| |||| ||||    
T  5687 aacatctattttgaaaggatatgaaggcattggatgcttgtt-cttttaagagcgttgacaaagtacaattgtacgaagtgtacaactactatctcc 5782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 221
Target Start/End: Original strand, 2700 - 2822
Alignment:
Q  97 agattgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttg 196  Q
    ||||||||||| |||||||||||   ||||||||||||||| |||  || ||| |||||||||||   ||| ||||| | | ||||||| ||||||||||    
T  2700 agattgcagaagactggaaaagtattgcaacgactattttggaagg-ttggaaagcattggatgcgtattcttcaaaga-gtgttgacatagtacgtttg 2797  T
Q  197 aacgaagtgtacaaccactacctcc 221  Q
     ||||||||||||||||||| ||||    
T  2798 tacgaagtgtacaaccactatctcc 2822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 221
Target Start/End: Original strand, 37991 - 38177
Alignment:
Q  35 agttcatcatgggatgcaacttaaggcttcaaa-agctatttaatggattcaacctcgtctaaagattgcagaatactg--gaaaagtgaagcaacgact 131  Q
    ||||||||| | |||||||| ||| | || ||| |||||||||| ||||||||  |||||||||||  ||  || ||||  ||||| ||  |||| ||||    
T  37991 agttcatcaggagatgcaacctaaagttttaaatagctatttaaaggattcaaattcgtctaaagaaagcgaaagactgaagaaaattg--gcaatgact 38088  T
Q  132 attttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    | |||||||| ||||||| ||||||||||||  | | ||||| | |||||||||||||||||  | ||||||||||| ||||||||||||    
T  38089 aatttgaaaggatttgaaggcattggatgcttatccttcaaaga-gcgttgacaaagtacgtccgtacgaagtgtacgaccactacctcc 38177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 5225 - 5345
Alignment:
Q  20 atcatcagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagt 119  Q
    |||| ||||||||||||||||||| | |||  ||||||  | |||||||||| ||| | ||| || | |||| ||||||||||||||| |||||||| ||    
T  5225 atcaccagaagctgcagttcatcaggagattgaacttatagtttcaaaagctgttttaaggactctaactcgcctaaagattgcagaagactggaaatgt 5324  T
Q  120 gaagcaacgactattttgaaa 140  Q
    |  |||||  |||||||||||    
T  5325 gtggcaacagctattttgaaa 5345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 1803 - 1889
Alignment:
Q  134 tttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||| ||||||| ||||||||||||  | | ||||| | ||||||||||||||||| |  ||||||||||| ||||||||||||    
T  1803 tttgaaaggatttgaaggcattggatgcttatccttcaaaga-gcgttgacaaagtacgtctatacgaagtgtacgaccactacctcc 1889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 39665 - 39503
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaac--ttaaggcttcaaaagctatttaatggattcaacctcgtctaaag 98  Q
    |||| |||||||||  || |||| ||||||||  ||||||||| | |||||||   |||| |||||||| ||| || |||||||| || ||||||||       
T  39665 agttcatcagaagctgaagatcaccagaagctctagttcatcaggagatgcaagatttaaagcttcaaaggctgttcaatggatttaatctcgtctaggc 39566  T
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgc 161  Q
    ||| || || ||| ||| ||||||||||| |||| |||||||| ||||||| ||||| |||||    
T  39565 attacaaaagactagaagagtgaagcaacaactaatttgaaaggatttgaaggcattagatgc 39503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 137725 - 137563
Alignment:
Q  1 agtttatcagaagccaaaaatcatcagaagctgcagttcatcatgggatgcaac--ttaaggcttcaaaagctatttaatggattcaacctcgtctaaag 98  Q
    |||| |||||||||  || |||| ||||||||  ||||||||| | |||||||   |||| |||||||| ||| || |||||||| || ||||||||       
T  137725 agttcatcagaagctgaagatcaccagaagctctagttcatcaggagatgcaagatttaaagcttcaaaggctgttcaatggatttaatctcgtctaggc 137626  T
Q  99 attgcagaatactggaaaagtgaagcaacgactattttgaaagaatttgaacgcattggatgc 161  Q
    ||| || || ||| ||| ||||||||||| |||| |||||||| ||||||| ||||| |||||    
T  137625 attacaaaagactagaagagtgaagcaacaactaatttgaaaggatttgaaggcattagatgc 137563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 7469 - 7404
Alignment:
Q  151 gcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    ||||||||||||| ||| ||||| | ||||||||| ||||| |||| ||||||||||||||||||||    
T  7469 gcattggatgctaattcatcaaaga-gcgttgacatagtacatttgtacgaagtgtacaaccactac 7404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 6126 - 6027
Alignment:
Q  120 gaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactacct 219  Q
    |||||||| |||| ||  |||| ||||||| |||||||||||| |||| |  || | |||||||||||||||  ||| || |||||||||||||||||||    
T  6126 gaagcaacaactaattcaaaaggatttgaaggcattggatgcttgttctttgaaga-gcgttgacaaagtacaattgtacaaagtgtacaaccactacct 6028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 217
Target Start/End: Original strand, 727 - 909
Alignment:
Q  25 cagaagctgcagttcatcatgggatgcaacttaaggcttcaaaagctatttaatggattcaacctcgtctaaagattgcagaatactggaaaagtgaagc 124  Q
    ||||| ||||||||||||| | |||| ||||||| | |||||||||| ||| | ||| || | |||||||| | ||||||||| ||| |||||||   ||    
T  727 cagaaactgcagttcatcaggagatgaaacttaaagtttcaaaagctgtttcaaggactctaactcgtctataaattgcagaagactagaaaagtatggc 826  T
Q  125 aacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    |||  |||||||||         || | ||||||||||  ||| || ||| |||||||||| | |||||||| ||||||||||||||||||||    
T  827 aacagctattttga---------aatgtattggatgcttattcttc-aaagagcgttgacataatacgtttgtacgaagtgtacaaccactac 909  T

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Target: scaffold0324 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 221
Target Start/End: Complemental strand, 10078 - 9975
Alignment:
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccacta 216  Q
    |||||||||||| ||| ||  || ||||||||| ||||| |||||| |||| |  || | |||||||||||||||  ||| || ||||||||||||||||    
T  10078 agtgaagcaacggctaattcaaatgaatttgaaggcattcgatgcttgttctttgaaga-gcgttgacaaagtacaattgtacaaagtgtacaaccacta 9980  T
Q  217 cctcc 221  Q
    |||||    
T  9979 cctcc 9975  T

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Target: scaffold0193 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 167
Target Start/End: Complemental strand, 16015 - 15866
Alignment:
Q  21 tcatcagaagctgcagttcatcatgggatgcaa--cttaaggcttcaaaagctattt-aatggattcaacctcgtctaaagattgcagaatactggaaaa 117  Q
    ||||||||||||  ||||||||| | |||||||  ||||| |||||||||| |  || ||||||||||| |||||| ||  |||||| || ||  ||  |    
T  16015 tcatcagaagctaaagttcatcaggagatgcaagacttaaagcttcaaaagattgttcaatggattcaatctcgtccaagaattgcaaaagaccagagga 15916  T
Q  118 gtgaagcaacgactattttgaaagaatttgaacgcattggatgctagttc 167  Q
    |||||||| | | ||||||||||| | ||||| |||||||||||| ||||    
T  15915 gtgaagcaccaattattttgaaaggacttgaaggcattggatgcttgttc 15866  T

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Target: scaffold0045 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 87623 - 87688
Alignment:
Q  151 gcattggatgctagttcctcaaaaaagcgttgacaaagtacgtttgaacgaagtgtacaaccactac 217  Q
    ||||||||||| | ||| ||||| | ||||||||| ||||||| || ||||||||||||||||||||    
T  87623 gcattggatgcaaattcttcaaaga-gcgttgacatagtacgtctgtacgaagtgtacaaccactac 87688  T

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Target: scaffold0908 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 3942 - 3987
Alignment:
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    |||||||||||||||| | || ||||||||||| ||||||||||||    
T  3942 agcgttgacaaagtacatctgtacgaagtgtacgaccactacctcc 3987  T

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Target: scaffold0530 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 2042 - 2087
Alignment:
Q  176 agcgttgacaaagtacgtttgaacgaagtgtacaaccactacctcc 221  Q
    ||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  2042 agcgttgacaaagtacaattgtacgaagtgtacaaccactatctcc 2087  T

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Target: scaffold0334 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 9917 - 9872
Alignment:
Q  117 agtgaagcaacgactattttgaaagaatttgaacgcattggatgct 162  Q
    ||||||| ||||||||||||||||| | ||||| ||||||||||||    
T  9917 agtgaagtaacgactattttgaaaggacttgaaagcattggatgct 9872  T

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