View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6210_high_98 (Length: 214)

Name: NF6210_high_98
Description: NF6210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6210_high_98
NF6210_high_98
[»] chr4 (42 HSPs)
chr4 (18-96)||(52920384-52920462)
chr4 (115-201)||(198999-199085)
chr4 (123-201)||(40847685-40847763)
chr4 (112-200)||(26423756-26423844)
chr4 (114-201)||(55816450-55816537)
chr4 (115-201)||(20075525-20075611)
chr4 (115-201)||(40848130-40848216)
chr4 (115-201)||(52597490-52597576)
chr4 (133-201)||(29809087-29809155)
chr4 (123-201)||(199226-199304)
chr4 (115-201)||(36945223-36945309)
chr4 (133-201)||(25370392-25370460)
chr4 (133-201)||(40344521-40344589)
chr4 (114-201)||(389405-389492)
chr4 (115-198)||(40345133-40345216)
chr4 (115-198)||(48782077-48782160)
chr4 (123-201)||(2713843-2713921)
chr4 (123-201)||(12639973-12640051)
chr4 (123-201)||(32291023-32291101)
chr4 (115-201)||(32902465-32902551)
chr4 (115-201)||(36111217-36111302)
chr4 (123-201)||(52597711-52597789)
chr4 (123-201)||(55815833-55815911)
chr4 (115-200)||(48090466-48090551)
chr4 (117-201)||(28223565-28223649)
chr4 (153-201)||(37566941-37566989)
chr4 (133-201)||(48091095-48091163)
chr4 (123-198)||(388761-388836)
chr4 (115-198)||(12640589-12640672)
chr4 (114-189)||(20422130-20422205)
chr4 (118-201)||(25369786-25369869)
chr4 (123-201)||(31876796-31876874)
chr4 (154-201)||(20076186-20076233)
chr4 (123-201)||(20422731-20422809)
chr4 (123-201)||(26424404-26424482)
chr4 (115-201)||(35427246-35427331)
chr4 (123-201)||(37567474-37567552)
chr4 (123-200)||(33569728-33569805)
chr4 (115-198)||(31877435-31877519)
chr4 (133-201)||(36944628-36944696)
chr4 (159-200)||(47328397-47328438)
chr4 (153-201)||(32901889-32901937)
[»] chr7 (26 HSPs)
chr7 (115-201)||(34853391-34853477)
chr7 (115-201)||(24044043-24044129)
chr7 (133-201)||(4894517-4894585)
chr7 (115-198)||(42456519-42456602)
chr7 (115-201)||(22275425-22275510)
chr7 (116-198)||(36683467-36683549)
chr7 (115-201)||(46814405-46814491)
chr7 (115-201)||(47814635-47814721)
chr7 (115-201)||(19816264-19816350)
chr7 (123-201)||(27855574-27855651)
chr7 (123-201)||(34853996-34854074)
chr7 (123-201)||(36682843-36682921)
chr7 (123-201)||(42455929-42456007)
chr7 (133-198)||(36620136-36620201)
chr7 (133-201)||(47813989-47814057)
chr7 (133-198)||(22276079-22276144)
chr7 (123-201)||(4895082-4895160)
chr7 (123-201)||(30711796-30711874)
chr7 (167-201)||(33806021-33806055)
chr7 (133-198)||(19816895-19816960)
chr7 (153-201)||(32499287-32499335)
chr7 (158-201)||(18520900-18520943)
chr7 (158-201)||(32499872-32499915)
chr7 (115-201)||(24323982-24324067)
chr7 (123-201)||(46732575-46732653)
chr7 (123-201)||(46815062-46815139)
[»] chr1 (22 HSPs)
chr1 (115-201)||(27797117-27797203)
chr1 (110-201)||(43368835-43368926)
chr1 (123-201)||(1403048-1403126)
chr1 (115-201)||(1403688-1403773)
chr1 (115-201)||(52859788-52859874)
chr1 (133-201)||(42839548-42839616)
chr1 (133-201)||(43368208-43368276)
chr1 (114-201)||(42839700-42839787)
chr1 (115-201)||(7219648-7219733)
chr1 (123-201)||(42838945-42839023)
chr1 (114-201)||(8560743-8560829)
chr1 (123-201)||(6288204-6288282)
chr1 (123-201)||(49533751-49533829)
chr1 (123-201)||(27797736-27797814)
chr1 (134-199)||(27817006-27817071)
chr1 (117-201)||(48843582-48843666)
chr1 (115-198)||(42840316-42840399)
chr1 (123-201)||(8560164-8560242)
chr1 (123-201)||(49534396-49534474)
chr1 (153-201)||(6287658-6287706)
chr1 (153-201)||(48843962-48844010)
chr1 (133-201)||(51248483-51248551)
[»] scaffold0229 (1 HSPs)
scaffold0229 (123-201)||(15233-15311)
[»] chr8 (32 HSPs)
chr8 (112-198)||(43481284-43481370)
chr8 (115-201)||(43591007-43591093)
chr8 (110-201)||(11998451-11998542)
chr8 (115-201)||(4373686-4373772)
chr8 (123-201)||(7818482-7818560)
chr8 (115-201)||(7819097-7819183)
chr8 (123-201)||(16880518-16880596)
chr8 (123-201)||(33114188-33114266)
chr8 (123-201)||(40309500-40309578)
chr8 (133-201)||(39852172-39852240)
chr8 (123-201)||(16879896-16879974)
chr8 (123-201)||(16889203-16889281)
chr8 (123-201)||(35237267-35237345)
chr8 (115-201)||(40907599-40907684)
chr8 (133-198)||(38778798-38778863)
chr8 (109-201)||(30115996-30116088)
chr8 (133-201)||(38778172-38778240)
chr8 (134-201)||(30115386-30115453)
chr8 (123-201)||(10806437-10806515)
chr8 (123-201)||(11999080-11999158)
chr8 (115-201)||(36848197-36848283)
chr8 (115-201)||(39852803-39852889)
chr8 (123-201)||(43591616-43591694)
chr8 (115-201)||(44061985-44062071)
chr8 (141-201)||(2209032-2209092)
chr8 (134-201)||(16889828-16889895)
chr8 (123-201)||(43480624-43480702)
chr8 (153-201)||(4374301-4374349)
chr8 (133-201)||(33113593-33113661)
chr8 (117-200)||(35237865-35237947)
chr8 (123-198)||(44062599-44062674)
chr8 (153-198)||(4374995-4375040)
[»] chr6 (13 HSPs)
chr6 (131-201)||(6032753-6032823)
chr6 (115-201)||(6032158-6032244)
chr6 (123-201)||(33668229-33668307)
chr6 (123-201)||(12809702-12809780)
chr6 (123-201)||(13936640-13936718)
chr6 (116-201)||(5523201-5523286)
chr6 (133-201)||(13944308-13944376)
chr6 (123-201)||(5523846-5523924)
chr6 (115-201)||(12809069-12809155)
chr6 (137-201)||(30611345-30611409)
chr6 (115-201)||(30610711-30610797)
chr6 (133-201)||(31723851-31723919)
chr6 (107-198)||(33668833-33668924)
[»] chr3 (39 HSPs)
chr3 (123-201)||(25025182-25025260)
chr3 (123-201)||(3944903-3944981)
chr3 (115-201)||(25025764-25025850)
chr3 (115-201)||(29342341-29342427)
chr3 (115-201)||(44868618-44868704)
chr3 (133-201)||(37373983-37374051)
chr3 (134-201)||(8427743-8427810)
chr3 (123-198)||(50675128-50675203)
chr3 (123-201)||(19555278-19555356)
chr3 (115-201)||(23584237-23584323)
chr3 (123-201)||(23584883-23584961)
chr3 (115-201)||(23599060-23599146)
chr3 (123-201)||(23599706-23599784)
chr3 (123-201)||(50687708-50687786)
chr3 (115-201)||(55281835-55281921)
chr3 (133-201)||(31014924-31014992)
chr3 (133-201)||(32672184-32672252)
chr3 (114-201)||(19555923-19556013)
chr3 (115-190)||(41459130-41459204)
chr3 (110-193)||(43658250-43658332)
chr3 (115-201)||(31014337-31014423)
chr3 (115-201)||(37375468-37375554)
chr3 (123-201)||(44868015-44868093)
chr3 (115-198)||(37374609-37374692)
chr3 (150-201)||(38575642-38575693)
chr3 (138-201)||(55282421-55282484)
chr3 (135-201)||(47737673-47737739)
chr3 (153-201)||(42356274-42356322)
chr3 (153-201)||(43658895-43658943)
chr3 (133-201)||(48219235-48219303)
chr3 (158-201)||(37374858-37374901)
chr3 (109-164)||(41041292-41041347)
chr3 (115-201)||(24220579-24220665)
chr3 (167-201)||(29342993-29343027)
chr3 (167-201)||(40887941-40887975)
chr3 (115-201)||(41875616-41875702)
chr3 (115-201)||(48218591-48218677)
chr3 (167-201)||(49752325-49752359)
chr3 (153-201)||(38575059-38575107)
[»] chr2 (32 HSPs)
chr2 (115-201)||(7717285-7717370)
chr2 (115-201)||(28224388-28224474)
chr2 (115-198)||(6849288-6849371)
chr2 (123-201)||(4386960-4387038)
chr2 (115-201)||(7583132-7583218)
chr2 (123-201)||(9224274-9224352)
chr2 (115-201)||(16571726-16571812)
chr2 (115-201)||(16887583-16887669)
chr2 (126-198)||(6849545-6849617)
chr2 (114-201)||(3595245-3595332)
chr2 (118-201)||(10883290-10883373)
chr2 (123-201)||(7716679-7716757)
chr2 (123-201)||(11256124-11256202)
chr2 (123-201)||(16571126-16571204)
chr2 (123-201)||(20244171-20244249)
chr2 (123-201)||(28223796-28223874)
chr2 (137-201)||(30161955-30162019)
chr2 (133-201)||(39477325-39477393)
chr2 (126-201)||(11256740-11256815)
chr2 (134-201)||(39476534-39476601)
chr2 (115-198)||(40166846-40166929)
chr2 (123-201)||(3595895-3595973)
chr2 (133-198)||(16903092-16903157)
chr2 (153-201)||(467143-467191)
chr2 (133-201)||(467341-467409)
chr2 (133-201)||(17918039-17918107)
chr2 (123-198)||(8963512-8963587)
chr2 (123-201)||(7583793-7583871)
chr2 (115-189)||(8112680-8112754)
chr2 (123-201)||(8113300-8113378)
chr2 (141-201)||(20243579-20243639)
chr2 (153-201)||(40165911-40165959)
[»] chr5 (15 HSPs)
chr5 (110-201)||(3739663-3739754)
chr5 (123-201)||(3957508-3957586)
chr5 (115-201)||(26687500-26687586)
chr5 (115-201)||(26957231-26957317)
chr5 (123-201)||(5324403-5324481)
chr5 (123-201)||(33430051-33430128)
chr5 (133-201)||(8813683-8813751)
chr5 (123-198)||(3958137-3958212)
chr5 (123-198)||(4929509-4929584)
chr5 (115-201)||(4928871-4928957)
chr5 (123-201)||(28075969-28076047)
chr5 (167-201)||(21770050-21770084)
chr5 (167-201)||(26688057-26688091)
chr5 (167-201)||(26957788-26957822)
chr5 (167-201)||(42408565-42408599)
[»] scaffold0368 (1 HSPs)
scaffold0368 (123-201)||(11784-11862)
[»] scaffold0007 (1 HSPs)
scaffold0007 (123-201)||(11274-11351)
[»] scaffold1095 (1 HSPs)
scaffold1095 (114-201)||(1484-1571)


Alignment Details
Target: chr4 (Bit Score: 79; Significance: 4e-37; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 52920384 - 52920462
Alignment:
Q  18 aatttaacaaccacttttgtccccatttattacagatcaaatgaatgaatcaatttcaataaatccatcaactagagga 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52920384 aatttaacaaccacttttgtccccatttattacagatcaaatgaatgaatcaatttcaataaatccatcaactagagga 52920462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 198999 - 199085
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||||||||||||||| || |||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  198999 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttaaattcaatgattagattaagtgaagaacatattctt 199085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 40847685 - 40847763
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| |||||||||||||||||| || ||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  40847685 ttcacatggaaaaggttaatcctttcccaccatgagaaagttggattcaatgattagattaagtgaagaacatattctt 40847763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 112 - 200
Target Start/End: Original strand, 26423756 - 26423844
Alignment:
Q  112 tttggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattct 200  Q
    |||||||||| ||||||| | |||||||||||||||| || ||||| ||||||  |||||||||||| |||||||||||||||||||||    
T  26423756 tttggtgtgtgttcacatgggaaaggttaatcctttcccaccatgaaaaagttggattcaatgattagattaagtgaagaacatattct 26423844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 55816537 - 55816450
Alignment:
Q  114 tggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||| ||||||| | |||||||||||||||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  55816537 tggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 55816450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 20075525 - 20075611
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||||||||||||||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  20075525 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 20075611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 40848216 - 40848130
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| ||||||||||||| |||||||  ||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  40848216 ggtgtgtgttcacatggaaaaggttaatcatttctcactatgggaaagtttgattcaatgattagattaagtgaagaacatattctt 40848130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 52597490 - 52597576
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | ||||||||||| |||| || |||| |||||||| |||||||||||| ||||||||||||||||||||||    
T  52597490 ggtgtgtgttcacatgggaaaggttaatcttttcccaccatgggaaagttagattcaatgattagattaagtgaagaacatattctt 52597576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 29809155 - 29809087
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||||||| ||||| |||||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  29809155 aaaggttaatcatttcttatcatgggaaagttgaattcaatgattagattaagtgaagaacatattctt 29809087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 199304 - 199226
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  199304 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 199226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 36945309 - 36945223
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||||||||||||||  || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  36945309 ggtgtgtgttcacatgggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 36945223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 25370460 - 25370392
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||||||||||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  25370460 aaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 25370392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 40344521 - 40344589
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||| |||||||||||||||||||||||||||  ||| ||| |||| ||||||||||||||||||||||    
T  40344521 aaagtttaatcctttctcatcatgagaaagttggattaaattattagattaagtgaagaacatattctt 40344589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 389492 - 389405
Alignment:
Q  114 tggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||| ||||||| | |||||||||||||||| || ||||  ||||||  ||||| |||||| ||||||||||||||||||||||    
T  389492 tggtgtgtgttcacatgggaaaggttaatcctttcccaccatggaaaagttggattcagtgattagattaagtgaagaacatattctt 389405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 40345216 - 40345133
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    ||||||| ||||||| | ||||||||||| |||| ||  ||| |||||||| |||||||||||| |||||||||||||||||||    
T  40345216 ggtgtgtgttcacatgggaaaggttaatcttttcccacaatgggaaagttagattcaatgattagattaagtgaagaacatatt 40345133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 48782160 - 48782077
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    ||||||| ||||||| | ||||||||||| |||| || |||| |||||||  |||||||||||| |||||||||||||||||||    
T  48782160 ggtgtgtgttcacatgggaaaggttaatcatttcgcaccatgggaaagttggattcaatgattagattaagtgaagaacatatt 48782077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 2713921 - 2713843
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||| || ||||  ||||||  |||||||||||| ||||||||||||||||||||||    
T  2713921 ttcacatgggaaaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagtgaagaacatattctt 2713843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 12639973 - 12640051
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||  || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  12639973 ttcacatgggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 12640051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 32291023 - 32291101
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | ||||||||||| ||||  |||||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  32291023 ttcacatgggaaaggttaatcatttccaatcatgggaaagttggattcaatgattagattaagtgaagaacatattctt 32291101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 32902551 - 32902465
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| |||||||   ||||||||||  |||| || |||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  32902551 ggtgtgtgttcacatgagaaaggttaatattttcccaccatgggaaagttgaattcaatgattagattaagtgaagaacatattctt 32902465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 36111302 - 36111217
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||||||||||||||| || |||| |||| ||  |||||||||||| ||||||||||||||||||||||    
T  36111302 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaa-ttggattcaatgattagattaagtgaagaacatattctt 36111217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 52597789 - 52597711
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | ||||||||||||||| ||| |||  |||||||  |||||||||||| ||||||||||||||||||||||    
T  52597789 ttcacatgggaaaggttaatcctttttcaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 52597711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 55815833 - 55815911
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||| ||  ||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  55815833 ttcacatgggaaaggttaatcctttcccactatgggaaagttggattcaatgattagattaagtgaagaacatattctt 55815911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 115 - 200
Target Start/End: Original strand, 48090466 - 48090551
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattct 200  Q
    ||||||| ||||||| | |||||||||||| ||| || |||| |||||||  |||||||||||| |||||||| ||||||||||||    
T  48090466 ggtgtgtgttcacatgggaaaggttaatccattcccaccatgggaaagttggattcaatgattagattaagtgtagaacatattct 48090551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 28223565 - 28223649
Alignment:
Q  117 tgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||| ||||||| | ||||||||||| |||| |   |||||||||||  |||||||||||| ||||||||||||||||||||||    
T  28223565 tgtgtgttcacatgggaaaggttaatcttttccctctatgagaaagttggattcaatgattagattaagtgaagaacatattctt 28223649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 37566941 - 37566989
Alignment:
Q  153 catgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  37566941 catgagaaaattagattcaatgattaaattaagtgaagaacatattctt 37566989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 48091163 - 48091095
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||||||| |||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  48091163 aaaggttaatcttttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 48091095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 123 - 198
Target Start/End: Original strand, 388761 - 388836
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    ||||||| | |||||||||||||||| || |||| |||||||  |||||||||||| |||||||||| ||||||||    
T  388761 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaaaaacatatt 388836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 12640672 - 12640589
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    ||||||| ||||||| | |||| ||||||||||| || |||| |||||||  |||||||||||| |||||| ||||||||||||    
T  12640672 ggtgtgtgttcacatgggaaagcttaatcctttcccaccatgggaaagttggattcaatgattagattaagcgaagaacatatt 12640589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 189
Target Start/End: Original strand, 20422130 - 20422205
Alignment:
Q  114 tggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaa 189  Q
    |||||||| ||||||| | |||||||||||||||| || |||| ||||| || |||||||||||| ||||||||||    
T  20422130 tggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaaggtagattcaatgattagattaagtgaa 20422205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 118 - 201
Target Start/End: Original strand, 25369786 - 25369869
Alignment:
Q  118 gtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||| ||||||| | |||||||||||||||  ||  ||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  25369786 gtgtgttcacatgggaaaggttaatccttttccactatgggaaagttggattcaatgattagattaagtgaagaacatattctt 25369869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 31876796 - 31876874
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||  || ||||  ||||||  |||||||||||| ||||||||||||||||||||||    
T  31876796 ttcacatgggaaaggttaatccttttccaccatggaaaagttggattcaatgattagattaagtgaagaacatattctt 31876874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 20076233 - 20076186
Alignment:
Q  154 atgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||||||  |||||||||||| ||||||||||||||||||||||    
T  20076233 atgagaaagttggattcaatgattagattaagtgaagaacatattctt 20076186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 20422809 - 20422731
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||| ||||||||||  || ||||  ||||||  |||||||||||| ||||||||||||||||||||||    
T  20422809 ttcacatgggaaagcttaatccttttccaccatggaaaagttggattcaatgattagattaagtgaagaacatattctt 20422731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 26424482 - 26424404
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||| | ||||  || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  26424482 ttcacatgggaaaggttagttcttttccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 26424404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 35427246 - 35427331
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||||||||||||||  |  |||| |||| ||  |||||||||||| ||||||||||||||||||||||    
T  35427246 ggtgtgtgttcacatgggaaaggttaatccttttccgccatgggaaa-ttggattcaatgattagattaagtgaagaacatattctt 35427331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 37567552 - 37567474
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||| ||||  || |||| |||||||  |||||||||||| ||||||| ||||||||||||||    
T  37567552 ttcacatgggaaaggttaatacttttccaccatgggaaagttggattcaatgattagattaagtaaagaacatattctt 37567474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 33569728 - 33569805
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattct 200  Q
    ||||||| | |||||| ||||||||| || ||||  ||||||  ||||||| |||| |||||||||||||||||||||    
T  33569728 ttcacatgggaaaggtcaatcctttcccaccatggaaaagttggattcaataattagattaagtgaagaacatattct 33569805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 31877519 - 31877435
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggtt-aatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    ||||||| ||||||| ||||| ||| |||||||| |||  ||| |||||||  ||| |||||||| |||||||||||||||||||    
T  31877519 ggtgtgtgttcacatggaaaaagtttaatcctttttcactatgggaaagttggatttaatgattagattaagtgaagaacatatt 31877435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 36944628 - 36944696
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||||||| |||  || ||||  ||||||  |||||||||||| ||||||||||||||||||||||    
T  36944628 aaaggttaatctttttccaccatggaaaagttggattcaatgattagattaagtgaagaacatattctt 36944696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 47328438 - 47328397
Alignment:
Q  159 aaagttaaattcaatgattaaattaagtgaagaacatattct 200  Q
    ||||||| ||||||| |||| |||||||||||||||||||||    
T  47328438 aaagttagattcaataattagattaagtgaagaacatattct 47328397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 32901889 - 32901937
Alignment:
Q  153 catgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||| |||||||  |||||||||||| ||||||| ||||||||||||||    
T  32901889 catgggaaagttggattcaatgattagattaagtaaagaacatattctt 32901937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 9e-23; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 34853391 - 34853477
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||||||||||||||| || |||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  34853391 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttgaattcaatgattagattaagtgaagaacatattctt 34853477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 24044129 - 24044043
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||||||||||||||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  24044129 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttttattcaatgattagattaagtgaagaacatattctt 24044043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 4894517 - 4894585
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||||||||||| || |||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  4894517 aaaggttaatcctttcccaccatgggaaagttgaattcaatgattagattaagtgaagaacatattctt 4894585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 42456602 - 42456519
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    ||||||| ||||||| | |||||||||||||||| || |||| |||||||  |||||||||||| |||||||||||||||||||    
T  42456602 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattacattaagtgaagaacatatt 42456519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 22275425 - 22275510
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| ||||||||||||| |||| || |||| ||||||| | ||||||||||| ||||||||||||||||||||||    
T  22275425 ggtgtgtgttcacatggaaaaggttaatcatttcccaccatgggaaagttga-ttcaatgattagattaagtgaagaacatattctt 22275510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 116 - 198
Target Start/End: Complemental strand, 36683549 - 36683467
Alignment:
Q  116 gtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    |||||| ||||||| | |||||||||||||||| || |||| |||||||  |||||||||||| |||||||||||||||||||    
T  36683549 gtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatatt 36683467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 46814405 - 46814491
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| || |||| | |||||||||||||||| || |||| ||||||| ||||||| ||||| ||||||||||||||||||||||    
T  46814405 ggtgtgtgtttacatgggaaaggttaatcctttcccaccatgggaaagttgaattcaacgattagattaagtgaagaacatattctt 46814491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 47814721 - 47814635
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||| ||||||||||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  47814721 ggtgtgtgttcacatgggaaagcttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 47814635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 19816264 - 19816350
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||||||||||||||| || |||| |||||||  |||||||||||| |||||||| | |||||||||||    
T  19816264 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgtaaaacatattctt 19816350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 27855574 - 27855651
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | ||||||||||| |||| || |||||||||||| | ||||||||||| ||||||||||||||||||||||    
T  27855574 ttcacatgggaaaggttaatcatttcccaccatgagaaagttga-ttcaatgattagattaagtgaagaacatattctt 27855651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 34854074 - 34853996
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||| || |||  |||||||| | |||||||||| ||||||||||||||||||||||    
T  34854074 ttcacatgggaaaggttaatcctttcccaccataggaaagttagagtcaatgattagattaagtgaagaacatattctt 34853996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 36682843 - 36682921
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | ||||||||||| |||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  36682843 ttcacatgggaaaggttaatcatttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 36682921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 42455929 - 42456007
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||| || || | |||| ||  |||||||||||||||||||||||||||||||||||    
T  42455929 ttcacatgggaaaggttaatcctttcccaccacgggaaaattggattcaatgattaaattaagtgaagaacatattctt 42456007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 36620136 - 36620201
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    ||||||||||| |||   |||||||||||||| |||||||||||||||||||||||| ||||||||    
T  36620136 aaaggttaatctttttctatcatgagaaagttgaattcaatgattaaattaagtgaaaaacatatt 36620201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 47813989 - 47814057
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||||||||||| || ||||  ||||||  |||||||||||| ||||||||||||||||||||||    
T  47813989 aaaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagtgaagaacatattctt 47814057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 22276144 - 22276079
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    |||||||||||||||| || |||| |||||||  |||||||||||| ||||| |||||||||||||    
T  22276144 aaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaaatgaagaacatatt 22276079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 4895160 - 4895082
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | ||||||||||| |||  || |||| |||||||  ||||||| |||| ||||||||||||||||||||||    
T  4895160 ttcacatgggaaaggttaatcattttccaccatgggaaagttggattcaattattagattaagtgaagaacatattctt 4895082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 30711796 - 30711874
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||||||||  |||| || ||||  ||||||  ||||||| |||| ||||||||||||||||||||||    
T  30711796 ttcacatggaaaaggttaattttttcccaccatggaaaagttggattcaattattagattaagtgaagaacatattctt 30711874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 33806021 - 33806055
Alignment:
Q  167 attcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||||||||||||||||||||||||||||||    
T  33806021 attcaatgattaaattaagtgaagaacatattctt 33806055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 19816960 - 19816895
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    |||||||||||||||  || |||| |||||||  ||| |||||||| |||||||||||||||||||    
T  19816960 aaaggttaatccttttccaccatgggaaagttggattaaatgattagattaagtgaagaacatatt 19816895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 32499287 - 32499335
Alignment:
Q  153 catgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  32499287 catgggaaagttggattcaatgattagattaagtgaagaacatattctt 32499335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 18520900 - 18520943
Alignment:
Q  158 gaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||  |||||||||||| ||||||||||||||||||||||    
T  18520900 gaaagttggattcaatgattagattaagtgaagaacatattctt 18520943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 32499915 - 32499872
Alignment:
Q  158 gaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||  |||||||||||| ||||||||||||||||||||||    
T  32499915 gaaagttggattcaatgattagattaagtgaagaacatattctt 32499872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 24324067 - 24323982
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | ||||||||||| |||| ||  ||| |||| ||  ||||||| |||| ||||||||||||||||||||||    
T  24324067 ggtgtgtgttcacatgggaaaggttaatcatttcccactatgggaaa-ttggattcaataattagattaagtgaagaacatattctt 24323982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 46732575 - 46732653
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||| ||||| ||  |||  ||||||  |||||||||||| |||||||||| |||||||||||    
T  46732575 ttcacatgggaaaggttaattctttcccactatggaaaagttggattcaatgattagattaagtgaataacatattctt 46732653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 46815139 - 46815062
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| |||||| |||||  |||| || |||| |||||||  |||||||||||| ||||| ||||||||||||||||    
T  46815139 ttcacatggaaaag-ttaattatttcccaccatgggaaagttggattcaatgattagattaaatgaagaacatattctt 46815062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 9e-23; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 27797117 - 27797203
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| |||||||||||||||||| || |||| ||| ||| ||||||||||||| ||||||||||||||||||||||    
T  27797117 ggtgtgtgttcacatggaaaaggttaatcctttcccaccatgggaaggttgaattcaatgattagattaagtgaagaacatattctt 27797203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 110 - 201
Target Start/End: Complemental strand, 43368926 - 43368835
Alignment:
Q  110 tttttggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||||||| ||||||| | |||||||||| ||||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  43368926 tttttggtgtgtgttcacatgggaaaggttaattctttcccaccatgggaaagttgtattcaatgattagattaagtgaagaacatattctt 43368835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 1403048 - 1403126
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| |||||||||||||||||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  1403048 ttcacatggaaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 1403126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 1403773 - 1403688
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||||| |||||||||||||||| || |||| ||||||| | ||||||||||| ||||||||||||||||||||||    
T  1403773 ggtgtgtgttcacataggaaaggttaatcctttcccaccatgggaaagttga-ttcaatgattagattaagtgaagaacatattctt 1403688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 52859874 - 52859788
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | ||||||||||||||||  | |||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  52859874 ggtgtgtgttcacatgggaaaggttaatcctttccaaccatgggaaagttgaattcaatgattagattaagtgaagaacatattctt 52859788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 42839616 - 42839548
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||||||||||| || |||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  42839616 aaaggttaatcctttcccaccatgggaaagttgaattcaatgattagattaagtgaagaacatattctt 42839548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 43368208 - 43368276
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||||||||||| || |||| ||| |||| |||||||||||||||||||||||||||||||||||    
T  43368208 aaaggttaatcctttcccaccatgggaatgttagattcaatgattaaattaagtgaagaacatattctt 43368276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 114 - 201
Target Start/End: Original strand, 42839700 - 42839787
Alignment:
Q  114 tggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||| ||||||| | |||||||||||||||| || |||| |||||||| | |||||||| | ||||||||||||||||||||||    
T  42839700 tggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttagagtcaatgatcagattaagtgaagaacatattctt 42839787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 7219733 - 7219648
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||||||||||||||| ||||||| |||| ||  |||||||||||| ||||||||||||||||||||||    
T  7219733 ggtgtgtgttcacatgggaaaggttaatcctttcccatcatgggaaa-ttggattcaatgattagattaagtgaagaacatattctt 7219648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 42838945 - 42839023
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||| || |||| |||||||| | |||||||||| ||||||||||||||||||||||    
T  42838945 ttcacatggtaaaggttaatcctttcccaccatgggaaagttagagtcaatgattagattaagtgaagaacatattctt 42839023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 8560829 - 8560743
Alignment:
Q  114 tggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||| ||||||| | |||||||||||||||| || ||||  |||||| | ||||||||||| ||||||||||||||||||||||    
T  8560829 tggtgtgtgttcacatgggaaaggttaatcctttcccaccatggaaaagttga-ttcaatgattagattaagtgaagaacatattctt 8560743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 6288282 - 6288204
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | ||||||||||||||||||| ||||   |||||  |||||||||||| ||||||||||||||||||||||    
T  6288282 ttcacatgggaaaggttaatcctttctcaccatggagaagttggattcaatgattagattaagtgaagaacatattctt 6288204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 49533751 - 49533829
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||||  ||||||||||||||| || || | |||||||  |||||||||||| ||||||||||||||||||||||    
T  49533751 ttcacatagggaaggttaatcctttcccaccacgggaaagttggattcaatgattagattaagtgaagaacatattctt 49533829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 27797814 - 27797736
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||  ||  ||| |||||||| | |||||||||| ||||||||||||||||||||||    
T  27797814 ttcacatgggaaaggttaatccttttccactatgggaaagttagagtcaatgattagattaagtgaagaacatattctt 27797736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 27817071 - 27817006
Alignment:
Q  134 aaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattc 199  Q
    ||||||||||||||| || ||||  ||||||  |||||||||||| ||||||||||||||||||||    
T  27817071 aaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagtgaagaacatattc 27817006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 48843582 - 48843666
Alignment:
Q  117 tgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||| ||||||| | ||||||||||| |||| || |||  |||||||  |||||||||||| |||||||||| |||||||||||    
T  48843582 tgtgtgttcacatgggaaaggttaatcttttcacaccataggaaagttggattcaatgattatattaagtgaataacatattctt 48843666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 42840399 - 42840316
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    ||||||| || |||| | ||||||||||| |||  ||  ||| ||||||| ||||||||||||| |||||||||||||||||||    
T  42840399 ggtgtgtgtttacatgggaaaggttaatcattttccactatgggaaagttgaattcaatgattagattaagtgaagaacatatt 42840316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 8560164 - 8560242
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||  || |||| ||| |||  |||||| ||||| ||||||||||||||||||||||    
T  8560164 ttcacatgggaaaggttaatccttttccaccatgggaatgttggattcaaagattagattaagtgaagaacatattctt 8560242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 49534474 - 49534396
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||| || ||||  ||||||  |||||||||||| ||||||| || |||||||||||    
T  49534474 ttcacatgggaaaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagttaaaaacatattctt 49534396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 6287658 - 6287706
Alignment:
Q  153 catgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||| |||| | ||||||||||||| ||||||||||||||||||||||    
T  6287658 catgaaaaagattaattcaatgattagattaagtgaagaacatattctt 6287706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 48844010 - 48843962
Alignment:
Q  153 catgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  48844010 catgggaaagttggattcaatgattagattaagtgaagaacatattctt 48843962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 51248551 - 51248483
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||||||  |||| || ||||  ||||||  ||||||| |||| ||||||||||||||||||||||    
T  51248551 aaaggttaattttttcccaccatggaaaagtttgattcaataattagattaagtgaagaacatattctt 51248483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 15311 - 15233
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| |||||||||||||||||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  15311 ttcacatggaaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 15233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 43481370 - 43481284
Alignment:
Q  112 tttggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    |||||||||| |||||||  ||||||||||||||||| || |||| |||||||  |||||||||||| |||||||||||||||||||    
T  43481370 tttggtgtgtgttcacatgaaaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatatt 43481284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 43591007 - 43591093
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||||||||||||||| || |||| ||||||| ||||||||||||| ||||| ||||||||||||||||    
T  43591007 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttgaattcaatgattagattaaatgaagaacatattctt 43591093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 201
Target Start/End: Original strand, 11998451 - 11998542
Alignment:
Q  110 tttttggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||| ||||||| ||||||| | ||||||||||| |||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  11998451 ttttaggtgtgtgttcacatgggaaaggttaatcatttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 11998542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 4373686 - 4373772
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | ||| ||||||| |||| ||||||  ||||||| ||||||||||||| ||||||||||||||||||||||    
T  4373686 ggtgtgtgttcacatgggaaatgttaatcatttcccatcataggaaagttgaattcaatgattatattaagtgaagaacatattctt 4373772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 7818482 - 7818560
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  7818482 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 7818560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 7819183 - 7819097
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||| |||||| |||| || |||| |||||||| |||||||||||| ||||||||||||||||||||||    
T  7819183 ggtgtgtgttcacatgggaaagattaatcttttcccaccatgcgaaagttagattcaatgattagattaagtgaagaacatattctt 7819097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 16880596 - 16880518
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||| ||||||||||| || |||| |||||||| |||||||||||| ||||||||||||||||||||||    
T  16880596 ttcacatgggaaagattaatcctttcccaccatgtgaaagttagattcaatgattagattaagtgaagaacatattctt 16880518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 33114266 - 33114188
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  33114266 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 33114188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 40309578 - 40309500
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||||||||||||||||| |||| || |||  |||||||  |||||||||||| ||||||||||||||||||||||    
T  40309578 ttcacatagaaaaggttaatcatttcccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 40309500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 39852172 - 39852240
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||||||||||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  39852172 aaaggttaatcctttcccaccatgggaaagtttgattcaatgattagattaagtgaagaacatattctt 39852240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 16879896 - 16879974
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | ||| ||||||| ||||  ||||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  16879896 ttcacatgggaaaagttaatcatttcctatcatgagaaagttggattcaatgattagattaagtgaagaacatattctt 16879974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 16889203 - 16889281
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | ||||||||||| |||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  16889203 ttcacatgggaaaggttaatcttttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 16889281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 35237267 - 35237345
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||| || |||| |||||||  |||||||||||| |||||||||| |||||||||||    
T  35237267 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaataacatattctt 35237345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 40907599 - 40907684
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||||||||||||||| || || | ||||||| | ||||||||||| ||||||||||||||||||||||    
T  40907599 ggtgtgtgttcacatgggaaaggttaatcctttcccaccacgggaaagttga-ttcaatgattagattaagtgaagaacatattctt 40907684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 38778863 - 38778798
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    ||||||||||| ||||||| ||||||||||||  |||||||||||| ||||||||||||| |||||    
T  38778863 aaaggttaatcatttctcaccatgagaaagttgtattcaatgattagattaagtgaagaatatatt 38778798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 201
Target Start/End: Complemental strand, 30116088 - 30115996
Alignment:
Q  109 atttttggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||| ||||||| ||||||| | |||||||||||||||  || |||| |||||||  |||||||||||| ||||||| ||||| ||||||||    
T  30116088 attttaggtgtgtgttcacatgggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtaaagaatatattctt 30115996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 38778172 - 38778240
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||||||| |||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  38778172 aaaggttaatcatttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 38778240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 30115386 - 30115453
Alignment:
Q  134 aaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||||||||||| || ||||  ||||||  |||||||||||| ||||||||||||||||||||||    
T  30115386 aaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagtgaagaacatattctt 30115453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 10806515 - 10806437
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | ||||||||||| ||||  | |||| |||||||  |||||||||||||||||||| ||||||||||||||    
T  10806515 ttcacatgggaaaggttaatcttttcctaccatgggaaagtttgattcaatgattaaattaagtaaagaacatattctt 10806437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 11999158 - 11999080
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | ||||||||||| |||| || |||| |||||||  |||||||||||| || |||||||||||||||||||    
T  11999158 ttcacatgggaaaggttaatcatttcccaccatgggaaagttggattcaatgattagatgaagtgaagaacatattctt 11999080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 36848283 - 36848197
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||| ||||||||||  || ||||  ||||||  |||||||||||| ||||||||||||||||||||||    
T  36848283 ggtgtgtgttcacatgggaaagcttaatccttttccaccatggaaaagttggattcaatgattagattaagtgaagaacatattctt 36848197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 39852889 - 39852803
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| |||||||   |||||||||||||||| || ||| | ||||||| ||||||| |||| ||||||||||||| ||||||||    
T  39852889 ggtgtgtgttcacatgagaaaggttaatcctttcccaccataaaaaagttagattcaattattagattaagtgaagaatatattctt 39852803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 43591694 - 43591616
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | ||||||||||  |||| || |||| |||||||| | |||||||||| ||||||||||||||||||||||    
T  43591694 ttcacatgggaaaggttaattatttcccaccatgggaaagttagagtcaatgattagattaagtgaagaacatattctt 43591616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 44061985 - 44062071
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| |||||||   |||||||||| |||||  | |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  44061985 ggtgtgtgttcacatgagaaaggttaatactttccaaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 44062071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 2209032 - 2209092
Alignment:
Q  141 atcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||| || ||||||||||||  |||||||||||| |||||||||| |||||||||||    
T  2209032 atcctttcccaccatgagaaagttcgattcaatgattagattaagtgaataacatattctt 2209092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 16889895 - 16889828
Alignment:
Q  134 aaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||||| |||| || |||| |||||||  ||||||| |||| ||||||||||||||||||||||    
T  16889895 aaggttaatcatttcccaccatgggaaagttggattcaattattagattaagtgaagaacatattctt 16889828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 43480624 - 43480702
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | ||||||||||| |||  || |||| |||||||  ||| |||||||| ||||||||||||||||||||||    
T  43480624 ttcacatgggaaaggttaatctttttacaccatgggaaagttggattaaatgattagattaagtgaagaacatattctt 43480702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 4374349 - 4374301
Alignment:
Q  153 catgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  4374349 catgggaaagttggattcaatgattagattaagtgaagaacatattctt 4374301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 33113593 - 33113661
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||| |||||| |||| || |||| |||||||  |||||||||||| ||||||||||||| ||||||||    
T  33113593 aaagattaatcatttcccaccatgggaaagttggattcaatgattagattaagtgaagaatatattctt 33113661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 200
Target Start/End: Complemental strand, 35237947 - 35237865
Alignment:
Q  117 tgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattct 200  Q
    ||||| ||||||| | |||||||||||||||| || |||   |||||| | |||||| |||| |||||||||||||||||||||    
T  35237947 tgtgtgttcacatgggaaaggttaatcctttcccaccatagaaaagttga-ttcaataattagattaagtgaagaacatattct 35237865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 44062674 - 44062599
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    |||| |||| |||||||||||||||  || |||| |||||||  |||||||||||| |||||||| |||| |||||    
T  44062674 ttcatataggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtggagaatatatt 44062599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 4375040 - 4374995
Alignment:
Q  153 catgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    ||||||||||||  |||||||||||  |||||||||||||||||||    
T  4375040 catgagaaagttggattcaatgattggattaagtgaagaacatatt 4374995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 6032823 - 6032753
Alignment:
Q  131 gaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||||||||  ||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  6032823 gaaaaggttaattttttctcaccatgagaaagttagattcaatgattagattaagtgaagaacatattctt 6032753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 6032158 - 6032244
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||||||||||||||| ||  ||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  6032158 ggtgtgtgttcacatgggaaaggttaatcctttcccactatgggaaagttggattcaatgattagattaagtgaagaacatattctt 6032244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 33668229 - 33668307
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | ||||||||||| |||| || |||| |||||||  |||||||||||||||||||||||||||||||||||    
T  33668229 ttcacatgggaaaggttaatcatttcccaccatgggaaagttggattcaatgattaaattaagtgaagaacatattctt 33668307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 12809780 - 12809702
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||| |||  || |||||||  |||||||||||| ||||||||||||||||||||||    
T  12809780 ttcacatgggaaaggttaatcctttcccatggtgggaaagttggattcaatgattagattaagtgaagaacatattctt 12809702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 13936718 - 13936640
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||| || |||| |||||||| | |||||||||| ||||||| ||||||||||||||    
T  13936718 ttcacatgggaaaggttaatcctttcccaccatgggaaagttagagtcaatgattagattaagtaaagaacatattctt 13936640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 116 - 201
Target Start/End: Original strand, 5523201 - 5523286
Alignment:
Q  116 gtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||| ||||||| | |||||||||||||||  || |||  |||||||  |||||||||||| ||||||||||||||||||||||    
T  5523201 gtgtgtgttcacatgggaaaggttaatccttttccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 5523286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 13944308 - 13944376
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||| |||||| |||| ||||||| ||||||| ||||||||||||| ||||| ||||||||||||||||    
T  13944308 aaagattaatcatttcccatcatgggaaagttgaattcaatgattagattaaatgaagaacatattctt 13944376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 5523924 - 5523846
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | ||||||||||| |||| || |||  |||||||  |||||||||||| ||||||||||||||||||||||    
T  5523924 ttcacatgggaaaggttaatcttttcccaccattggaaagtttgattcaatgattagattaagtgaagaacatattctt 5523846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 12809069 - 12809155
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||||||||||||||| ||  ||  |||||||  || ||||||||| ||||||||||||||||||||||    
T  12809069 ggtgtgtgttcacatgggaaaggttaatcctttcccactataggaaagttggatgcaatgattagattaagtgaagaacatattctt 12809155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 30611409 - 30611345
Alignment:
Q  137 gttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||||||| || |||| |||||||  |||||||||||| ||||| ||||||||||||||||    
T  30611409 gttaatcctttcccaccatgggaaagttggattcaatgattagattaactgaagaacatattctt 30611345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 30610711 - 30610797
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||| ||| | ||||||||||| |||  || |||| |||| ||  |||||||||||| ||||||||||||||||||||||    
T  30610711 ggtgtgtgttcgcatgggaaaggttaatcattttccaccatgggaaaattggattcaatgattagattaagtgaagaacatattctt 30610797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 31723851 - 31723919
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||||||||||||  | |||| |||| ||  ||| |||||||| ||||||||||||||||||||||    
T  31723851 aaaggttaatcctttcctaccatgggaaatttggatttaatgattagattaagtgaagaacatattctt 31723919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 198
Target Start/End: Complemental strand, 33668924 - 33668833
Alignment:
Q  107 atatttttggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    |||||| |||||||| ||||||| | ||| ||||||| |||| || |||   ||||||  |||||||||||| ||||||||||||| |||||    
T  33668924 atatttatggtgtgtgttcacattggaaatgttaatcatttcccaccatagaaaagttggattcaatgattagattaagtgaagaatatatt 33668833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 25025182 - 25025260
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||| ||||||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  25025182 ttcacatgggaaaggttaatcctttcccatcatgggaaagtttgattcaatgattagattaagtgaagaacatattctt 25025260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 3944903 - 3944981
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  3944903 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 3944981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 25025850 - 25025764
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||||||||||||||| || |||| |||||||  |||||||||||| |||||| |||||||||||||||    
T  25025850 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagtttgattcaatgattagattaagagaagaacatattctt 25025764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 29342341 - 29342427
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | ||||||||||| |||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  29342341 ggtgtgtgttcacatgggaaaggttaatcttttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 29342427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 44868704 - 44868618
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||||||||||||||| || |||| |||| ||  |||||||||||| ||||||||||||||||||||||    
T  44868704 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaaatttgattcaatgattagattaagtgaagaacatattctt 44868618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 37373983 - 37374051
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||||||| |||| || |||| |||||||  |||||||||||||||||||||||||||||||||||    
T  37373983 aaaggttaatcttttcccaccatgggaaagttggattcaatgattaaattaagtgaagaacatattctt 37374051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 8427810 - 8427743
Alignment:
Q  134 aaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||||||||||| || |||| |||||||| ||| |||||||| ||||||||||||||||||||||    
T  8427810 aaggttaatcctttcccaccatgggaaagttagatttaatgattagattaagtgaagaacatattctt 8427743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 50675203 - 50675128
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    ||||||| | ||||||||||||||| |||  ||| ||||||| ||||||||||||| |||||||||||||||||||    
T  50675203 ttcacatgggaaaggttaatcctttttcacaatgggaaagttgaattcaatgattagattaagtgaagaacatatt 50675128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 19555278 - 19555356
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||  |||||||||||| |||| ||||||| |||||||  ||| |||||||| ||||||||||||||||||||||    
T  19555278 ttcacatgaaaaaggttaatcttttcccatcatgggaaagttggattaaatgattagattaagtgaagaacatattctt 19555356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 23584237 - 23584323
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | | |||||||||||||| || |||| |||||||  |||||||||||| |||||||||| |||||||||||    
T  23584237 ggtgtgtgttcacatgggacaggttaatcctttcccaccatgggaaagttcgattcaatgattagattaagtgaaaaacatattctt 23584323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 23584961 - 23584883
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||| || ||||  ||||||  |||||||||||| ||||||||||||||||||||||    
T  23584961 ttcacatgggaaaggttaatcctttcccaccatggtaaagttggattcaatgattagattaagtgaagaacatattctt 23584883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 23599060 - 23599146
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | | |||||||||||||| || |||| |||||||  |||||||||||| |||||||||| |||||||||||    
T  23599060 ggtgtgtgttcacatgggacaggttaatcctttcccaccatgggaaagttcgattcaatgattagattaagtgaaaaacatattctt 23599146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 23599784 - 23599706
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||| || ||||  ||||||  |||||||||||| ||||||||||||||||||||||    
T  23599784 ttcacatgggaaaggttaatcctttcccaccatggtaaagttggattcaatgattagattaagtgaagaacatattctt 23599706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 50687786 - 50687708
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||| ||||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  50687786 ttcacatgggaaaggttaattctttcccaccatgggaaagtttgattcaatgattagattaagtgaagaacatattctt 50687708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 55281835 - 55281921
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||||||||||||||| || |||| |||| ||  ||| |||||||| ||||||||||||||||||||||    
T  55281835 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaaattggatttaatgattagattaagtgaagaacatattctt 55281921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 31014992 - 31014924
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||||||| |||| ||||||  |||||||  |||||||||||| ||||||||||||||||||||||    
T  31014992 aaaggttaatcttttcccatcataggaaagttggattcaatgattagattaagtgaagaacatattctt 31014924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 32672184 - 32672252
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||||||||||| || |||| |||||||  ||| |||||||| ||||||||||||||||||||||    
T  32672184 aaaggttaatcctttcccaacatgggaaagttggatttaatgattagattaagtgaagaacatattctt 32672252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 19556013 - 19555923
Alignment:
Q  114 tggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagt--taa-attcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||| |||||||   |||||||||||||||| ||||||| ||||||  ||  |||||||||||| ||||||||||||||||||||||    
T  19556013 tggtgtgtgttcacatgagaaaggttaatcctttcccatcatgggaaagtagtaggattcaatgattagattaagtgaagaacatattctt 19555923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 41459130 - 41459204
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaag 190  Q
    ||||||| ||||||| | |||||||||||||||| || ||||||||||||  |||||||||||| |||||||||||    
T  41459130 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgagaaagtt-gattcaatgattagattaagtgaag 41459204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 110 - 193
Target Start/End: Original strand, 43658250 - 43658332
Alignment:
Q  110 tttttggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaac 193  Q
    |||||||||||| ||||||| |||| |||||||||||||| |  ||| |||||||  |||||||||||| ||||||||||||||    
T  43658250 tttttggtgtgtgttcacatggaaacggttaatcctttcttactatgggaaagtt-gattcaatgattagattaagtgaagaac 43658332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 31014337 - 31014423
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| |||||||   |||| ||||||||||  || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  31014337 ggtgtgtgttcacatgagaaagattaatccttttccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 31014423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 37375554 - 37375468
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| || |||| | |||||||||||||||| || ||| ||||||||  |||| ||||||| |||||||||||||||| |||||    
T  37375554 ggtgtgtgtttacatgggaaaggttaatcctttcccaccataagaaagttggattcgatgattagattaagtgaagaacatcttctt 37375468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 44868015 - 44868093
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||||| ||||||||||| |||  || |||| |||||||  |||||||||||| ||||||| ||||||||||||||    
T  44868015 ttcacataggaaaggttaatcattttccaccatgggaaagttggattcaatgattagattaagtaaagaacatattctt 44868093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 37374692 - 37374609
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    ||||||| ||||||| | ||| ||||| | |||| ||||||  |||||||  |||||||||||| |||||||||||||||||||    
T  37374692 ggtgtgtattcacatgggaaatgttaaccttttcccatcataggaaagttggattcaatgattagattaagtgaagaacatatt 37374609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 38575693 - 38575642
Alignment:
Q  150 catcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||  ||||||  |||||||||||||||||||||||||||||||||||    
T  38575693 catcatggaaaagttggattcaatgattaaattaagtgaagaacatattctt 38575642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 55282484 - 55282421
Alignment:
Q  138 ttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||||||| || |||| |||||||  ||| |||||||| ||||||||||||||||||||||    
T  55282484 ttaatcctttcccaccatgggaaagttggatttaatgattagattaagtgaagaacatattctt 55282421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 47737739 - 47737673
Alignment:
Q  135 aggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||||| |||| || |||| ||| |||  |||||||||||| ||||||||||||||||||||||    
T  47737739 aggttaatcatttcccaccatgggaatgttggattcaatgattagattaagtgaagaacatattctt 47737673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 42356274 - 42356322
Alignment:
Q  153 catgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  42356274 catgggaaagttggattcaatgattagattaagtgaagaacatattctt 42356322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 43658943 - 43658895
Alignment:
Q  153 catgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  43658943 catgggaaagttggattcaatgattagattaagtgaagaacatattctt 43658895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 48219303 - 48219235
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||||| |||||||| |||| |||| ||  |||||||||||| ||||||||| ||| ||||||||    
T  48219303 aaaggttaattctttctcaccatgggaaaattggattcaatgattagattaagtgatgaatatattctt 48219235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 37374858 - 37374901
Alignment:
Q  158 gaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||  |||||||||||| ||||||||||||||||||||||    
T  37374858 gaaagttggattcaatgattagattaagtgaagaacatattctt 37374901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 41041347 - 41041292
Alignment:
Q  109 atttttggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagtt 164  Q
    ||||| ||||||| |||||||||||||||| |||||||||  |||||| |||||||    
T  41041347 attttcggtgtgtgttcacatagaaaaggtgaatcctttcctatcatgggaaagtt 41041292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 24220579 - 24220665
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||||||||| |||||  | ||||  ||| ||  |||||||||| | ||||||||||||||||||||||    
T  24220579 ggtgtgtgttcacatgggaaaggttaattctttcctaccatggaaaaattggattcaatgatcagattaagtgaagaacatattctt 24220665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Complemental strand, 29343027 - 29342993
Alignment:
Q  167 attcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||||||| ||||||||||||||||||||||    
T  29343027 attcaatgattagattaagtgaagaacatattctt 29342993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Complemental strand, 40887975 - 40887941
Alignment:
Q  167 attcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||||||| ||||||||||||||||||||||    
T  40887975 attcaatgattagattaagtgaagaacatattctt 40887941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 41875702 - 41875616
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| |||| || | ||| ||||||| ||| | | |||| |||||||   ||||||||||| ||||||||||||||||||||||    
T  41875702 ggtgtgtgttcagatgggaaaagttaatcattttttaccatgggaaagttgggttcaatgattagattaagtgaagaacatattctt 41875616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 48218591 - 48218677
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| |||||||   ||||||||||| |||| ||  |||  ||||||  |||||||||||| |||||||||| |||||||||||    
T  48218591 ggtgtgtgttcacatgagaaaggttaatcttttcccactatggaaaagttggattcaatgattagattaagtgaataacatattctt 48218677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 49752325 - 49752359
Alignment:
Q  167 attcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||||||| ||||||||||||||||||||||    
T  49752325 attcaatgattagattaagtgaagaacatattctt 49752359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 38575059 - 38575107
Alignment:
Q  153 catgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||| |||||||  |||||||||||| ||||| ||||||||||||||||    
T  38575059 catgggaaagttggattcaatgattagattaaatgaagaacatattctt 38575107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 2e-20; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 7717370 - 7717285
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | ||||||||||||||||||| |||| ||||||| | ||||||||||| ||||||||||||||||||||||    
T  7717370 ggtgtgtgttcacatgggaaaggttaatcctttctcaccatgggaaagttga-ttcaatgattatattaagtgaagaacatattctt 7717285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 28224474 - 28224388
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||||||||||||||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  28224474 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 28224388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 115 - 198
Target Start/End: Original strand, 6849288 - 6849371
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    ||||||| ||||||| | |||||||||||||||| || |||| |||||||  |||||||||||| |||||||||||||||||||    
T  6849288 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatatt 6849371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 4387038 - 4386960
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  4387038 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 4386960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 7583132 - 7583218
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||||||||||||||| || ||||||||| ||  |||||||||||| |||| |||||||||||||||||    
T  7583132 ggtgtgtgttcacatcggaaaggttaatcctttcccaccatgagaaaattggattcaatgattagattaggtgaagaacatattctt 7583218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 9224274 - 9224352
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  9224274 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 9224352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 16571812 - 16571726
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||||||||||||||| ||||||| |||| ||  |||||||||||| || |||||||||||||||||||    
T  16571812 ggtgtgtgttcacatgggaaaggttaatcctttcccatcatgggaaaattggattcaatgattagatcaagtgaagaacatattctt 16571726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 16887583 - 16887669
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||||||||||||||| || |||| || ||||  |||||||||||| ||||||||||||||||||||||    
T  16887583 ggtgtgtgttcacatgggaaaggttaatcctttcccaccatgggatagttggattcaatgattagattaagtgaagaacatattctt 16887669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 6849617 - 6849545
Alignment:
Q  126 acatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    |||| |||||||||||||||||| || |||| |||||||  |||||||||||| |||||||||||||||||||    
T  6849617 acatggaaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatatt 6849545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 114 - 201
Target Start/End: Original strand, 3595245 - 3595332
Alignment:
Q  114 tggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||| ||||||| | |||||||||| ||||| || |||| |||||||  |||||||||||| || |||||||||||||||||||    
T  3595245 tggtgtgtgttcacatgggaaaggttaattctttcccaccatgggaaagttggattcaatgattagataaagtgaagaacatattctt 3595332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 118 - 201
Target Start/End: Original strand, 10883290 - 10883373
Alignment:
Q  118 gtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||| ||||||| | |||||||||||||||| || |||| |||||||  |||||||||||| ||||||| ||||||||||||||    
T  10883290 gtgtgttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtaaagaacatattctt 10883373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 7716679 - 7716757
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | ||| |||||||||||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  7716679 ttcacatgggaaatgttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 7716757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 11256124 - 11256202
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | ||||||||||| ||||||| ||||  ||||||  |||||||||||| ||||||||||||||||||||||    
T  11256124 ttcacatgggaaaggttaatcatttctcaccatggtaaagttggattcaatgattagattaagtgaagaacatattctt 11256202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 16571126 - 16571204
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||| || |||| |||||||  |||||||||||| |||||||||| |||||||||||    
T  16571126 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaaaaacatattctt 16571204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 20244249 - 20244171
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||| || ||||  ||||||  |||||||||||| ||||||||||||||||||||||    
T  20244249 ttcacatgggaaaggttaatcctttcccaccatggaaaagttggattcaatgattagattaagtgaagaacatattctt 20244171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 28223796 - 28223874
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||| || |||  |||||||  |||||||||||| ||||||||||||||||||||||    
T  28223796 ttcacatgggaaaggttaatcctttcccaccataggaaagttggattcaatgattagattaagtgaagaacatattctt 28223874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 30161955 - 30162019
Alignment:
Q  137 gttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||||||| |||||||  ||||||  |||||||||||| ||||||||||||||||||||||    
T  30161955 gttaatcctttcccatcatggaaaagttggattcaatgattagattaagtgaagaacatattctt 30162019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 39477393 - 39477325
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||||||| |||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  39477393 aaaggttaatcatttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 39477325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 11256815 - 11256740
Alignment:
Q  126 acatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||| ||||||||||||| |||  || ||||||||||||  |||||||||||| ||||||||||||| ||||||||    
T  11256815 acatggaaaaggttaatcattttccaccatgagaaagttggattcaatgattagattaagtgaagaatatattctt 11256740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 39476534 - 39476601
Alignment:
Q  134 aaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||||||||||| ||  ||| ||||||| ||||||||||||| ||||||||||||| ||||||||    
T  39476534 aaggttaatcctttcccactatgggaaagtttaattcaatgattagattaagtgaagaatatattctt 39476601  T

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Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 40166929 - 40166846
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    |||||||  |||||||| |||||||||||||||| || |||| |||| ||  |||||||||||| ||||||| |||||||||||    
T  40166929 ggtgtgtgctcacataggaaaggttaatcctttcccaccatgggaaaattggattcaatgattagattaagtcaagaacatatt 40166846  T

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Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 3595973 - 3595895
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | ||| ||||||||||| ||||||||  ||||||  |||||||||||| |||||||||| |||||||||||    
T  3595973 ttcacatgggaaatgttaatcctttttcatcatggaaaagttggattcaatgattagattaagtgaaaaacatattctt 3595895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 16903157 - 16903092
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    |||||||||||||||  || ||||||||||||  |||||||||||| |||||||||| ||||||||    
T  16903157 aaaggttaatccttttccaccatgagaaagttggattcaatgattagattaagtgaataacatatt 16903092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 467143 - 467191
Alignment:
Q  153 catgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||| |||||||  |||||||||||||||||||||||||||||||||||    
T  467143 catgggaaagttggattcaatgattaaattaagtgaagaacatattctt 467191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 467409 - 467341
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||||||| |||  || | ||| |||||| |||||||| |||||||||||||||||||||||||||    
T  467409 aaaggttaatcattttccaccgtgaaaaagttgaattcaataattaaattaagtgaagaacatattctt 467341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 17918039 - 17918107
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||||||||||| || | |||  ||||||| |||||||||||| ||||||||||||| ||||||||    
T  17918039 aaaggttaatcctttttctttatggaaaagttagattcaatgattagattaagtgaagaatatattctt 17918107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 198
Target Start/End: Original strand, 8963512 - 8963587
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    ||||||| | |||||||||||||||   |||||| |||||||  |||||||||||| |||||||||| ||||||||    
T  8963512 ttcacatgggaaaggttaatccttttctatcatgggaaagttggattcaatgattagattaagtgaaaaacatatt 8963587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 7583871 - 7583793
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | ||||||||||| |||| ||  ||| |||||||  ||||||||||||  |||||||||||||||||||||    
T  7583871 ttcacatgggaaaggttaatcttttcccactatgggaaagttggattcaatgattagcttaagtgaagaacatattctt 7583793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 115 - 189
Target Start/End: Original strand, 8112680 - 8112754
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaa 189  Q
    ||||||| |||||||   ||| ||||||||||||||| |||| |||||||  |||||||||||| ||||||||||    
T  8112680 ggtgtgtgttcacatgagaaatgttaatcctttctcaccatgggaaagttggattcaatgattagattaagtgaa 8112754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 8113378 - 8113300
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||  || |||| |||||||  |||| ||||||| |||| |||||||||||||||||    
T  8113378 ttcacatgggaaaggttaatccttttccaccatgggaaagttggattcgatgattagattatgtgaagaacatattctt 8113300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 20243579 - 20243639
Alignment:
Q  141 atcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||| || |||| |||||||  |||||||||||| ||||||||||||| ||||||||    
T  20243579 atcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaatatattctt 20243639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 40165911 - 40165959
Alignment:
Q  153 catgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||| |||||||  |||||||||||  ||||||||||||||||||||||    
T  40165911 catgggaaagttggattcaatgattggattaagtgaagaacatattctt 40165959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 1e-18; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 201
Target Start/End: Complemental strand, 3739754 - 3739663
Alignment:
Q  110 tttttggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||||||| ||||||||| |||  |||||||||||  |  |||||||||||  |||||||||||| ||||||||||||||||||||||    
T  3739754 tttttggtgtgtgttcacataggaaaacttaatcctttcctactatgagaaagttggattcaatgattagattaagtgaagaacatattctt 3739663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 3957508 - 3957586
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  3957508 ttcacatgggaaaggttaatcctttcccaccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 3957586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 26687500 - 26687586
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||||||||||||||   | |||| |||||||| |||||||||||| ||||||||||||||||||||||    
T  26687500 ggtgtgtgttcacatgggaaaggttaatccttttctaccatgggaaagttagattcaatgattagattaagtgaagaacatattctt 26687586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 26957231 - 26957317
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | |||||||||||||||   | |||| |||||||| |||||||||||| ||||||||||||||||||||||    
T  26957231 ggtgtgtgttcacatgggaaaggttaatccttttctaccatgggaaagttagattcaatgattagattaagtgaagaacatattctt 26957317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 5324481 - 5324403
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||| |||||  | ||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  5324481 ttcacatgggaaaggttaattctttcataccatgagaaagttggattcaatgattagattaagtgaagaacatattctt 5324403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 33430051 - 33430128
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||||||||||||||  | |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  33430051 ttcacatggaaaaggttaatcctttcctaccatg-gaaagttggattcaatgattagattaagtgaagaacatattctt 33430128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 8813751 - 8813683
Alignment:
Q  133 aaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||||||||||  ||||||| |||||||  |||||||||||| ||||||| ||||||||||||||    
T  8813751 aaaggttaatccttttccatcatgggaaagttggattcaatgattagattaagtaaagaacatattctt 8813683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 3958212 - 3958137
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    ||||||| | |||||||||||||||| |||||   |||||||  ||||||| |||| |||||||||||||||||||    
T  3958212 ttcacatgggaaaggttaatcctttcccatcaatggaaagtttgattcaataattagattaagtgaagaacatatt 3958137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 4929584 - 4929509
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatatt 198  Q
    ||||||| | |||||||||||||||  || |||| |||||||  |||||||||||| ||||||||||||| |||||    
T  4929584 ttcacatgggaaaggttaatccttttccaccatgggaaagttggattcaatgattagattaagtgaagaatatatt 4929509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 4928871 - 4928957
Alignment:
Q  115 ggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||| | ||| |||||||||||| || |||   ||||||  ||| |||||||| ||||||||||||||||||||||    
T  4928871 ggtgtgtgttcacatgggaaaagttaatcctttcccaccatagaaaagttggatttaatgattagattaagtgaagaacatattctt 4928957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 28076047 - 28075969
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| ||||||||||||| |||  || |||| |||||||  |||||||||||| |||||||||| || ||||||||    
T  28076047 ttcacatggaaaaggttaatcattttccaccatgggaaagttggattcaatgattagattaagtgaaaaatatattctt 28075969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 21770050 - 21770084
Alignment:
Q  167 attcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||||||| ||||||||||||||||||||||    
T  21770050 attcaatgattagattaagtgaagaacatattctt 21770084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Complemental strand, 26688091 - 26688057
Alignment:
Q  167 attcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||||||| ||||||||||||||||||||||    
T  26688091 attcaatgattatattaagtgaagaacatattctt 26688057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Complemental strand, 26957822 - 26957788
Alignment:
Q  167 attcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||||||| ||||||||||||||||||||||    
T  26957822 attcaatgattatattaagtgaagaacatattctt 26957788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Complemental strand, 42408599 - 42408565
Alignment:
Q  167 attcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||||||| ||||||||||||||||||||||    
T  42408599 attcaatgattagattaagtgaagaacatattctt 42408565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 11862 - 11784
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | |||||||||||||||| || |||| |||||||| | |||||||| | ||||||||||||||||||||||    
T  11862 ttcacatggtaaaggttaatcctttcccaccatgggaaagttagagtcaatgatcagattaagtgaagaacatattctt 11784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 11274 - 11351
Alignment:
Q  123 ttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    ||||||| | ||||||||||| |||| || |||| |||||||  |||||||||||| ||||||||||||||||||||||    
T  11274 ttcacatgggaaaggttaatcttttc-caccatgggaaagttggattcaatgattagattaagtgaagaacatattctt 11351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1095 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 201
Target Start/End: Original strand, 1484 - 1571
Alignment:
Q  114 tggtgtgtcttcacatagaaaaggttaatcctttctcatcatgagaaagttaaattcaatgattaaattaagtgaagaacatattctt 201  Q
    |||||||| ||||||| | |||| |||||| |||| || ||||  ||||||  |||||||||||| |||||||||| |||||||||||    
T  1484 tggtgtgtgttcacatgggaaagcttaatcatttcgcaccatggaaaagttggattcaatgattagattaagtgaataacatattctt 1571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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