View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6210_low_6 (Length: 548)
Name: NF6210_low_6
Description: NF6210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6210_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 494; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 494; E-Value: 0
Query Start/End: Original strand, 22 - 535
Target Start/End: Complemental strand, 27361628 - 27361115
Alignment:
| Q |
22 |
agggttggcttatgtgggtagggttgatgaagcagttgagattttgatggatatgaagacaggaaatataggtgttgatgtttattcttatagtgctgtt |
121 |
Q |
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| T |
27361628 |
agggttggcttatgtgggtagggttgatgaagcagttgagattttgatggatatgaagacaggaaatataggtgttgatgtttattcttatagtgctgtt |
27361529 |
T |
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| Q |
122 |
atgaatggattatgtaaagtgggtcgttcggacgaagcgatggagttgtttgatgaagctgttggagttggattgagtcctgacgtggttacttttaatg |
221 |
Q |
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| T |
27361528 |
atgaatggattatgtaaagtgggtcgttcggacgaagcgatggagttgtttgatgaagctgttggagttggattgaggcctgatgtggttacatttaatg |
27361429 |
T |
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| Q |
222 |
cattgattgaagggtatagtagggaagggagagaaatggagggtgttggtgttttgaagatgatgaaagagcatggttgtgttgctgatttgattaatta |
321 |
Q |
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| T |
27361428 |
cattgattgaagggtatagtagggaagggagagaaatggagggtgttggtgttttgaagatgatgaaagagcatggttgtgttgctgatttgattaatta |
27361329 |
T |
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| Q |
322 |
taagactgttttacatgggttgttaaagtggaatgaaactgtggaagcatttggggtttataaagaaatggtaaggattggatttgaagtcgattcgagg |
421 |
Q |
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| T |
27361328 |
taagactgttttacatgggttgttaaagtggaatgaaactgtggaagcatttggggtttataaagaaatggtaaggattggatttgaagtcgattcgagg |
27361229 |
T |
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| Q |
422 |
atgatggggactttggtgaggcgtttgtgtaagtggtcatggagggaaaaagggttgcttgaggatgcttgtgaagtgtttgagaaaatgaaagaaaggg |
521 |
Q |
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| T |
27361228 |
atgatggggactttggtgaggcgtttgtgtaagttgtcatggagggaaaaagggttgcttgaggatgcttgtgaagtgtttgagaaaatgaaagaaaggg |
27361129 |
T |
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| Q |
522 |
atttggtggttgat |
535 |
Q |
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| T |
27361128 |
gtttggtggttgat |
27361115 |
T |
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