View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6211_low_29 (Length: 205)

Name: NF6211_low_29
Description: NF6211
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6211_low_29
NF6211_low_29
[»] chr5 (62 HSPs)
chr5 (1-62)||(249683-249744)
chr5 (4-61)||(16365643-16365700)
chr5 (1-61)||(38702103-38702163)
chr5 (4-62)||(5144198-5144256)
chr5 (1-63)||(42394325-42394387)
chr5 (1-62)||(7579865-7579926)
chr5 (2-55)||(11992334-11992387)
chr5 (1-62)||(36060306-36060367)
chr5 (4-61)||(43346800-43346857)
chr5 (1-61)||(4175677-4175737)
chr5 (1-65)||(8825015-8825079)
chr5 (1-61)||(21606455-21606515)
chr5 (1-61)||(26854291-26854351)
chr5 (1-61)||(32440109-32440169)
chr5 (2-61)||(28447182-28447241)
chr5 (1-63)||(1795314-1795376)
chr5 (1-59)||(10889291-10889349)
chr5 (1-63)||(18794743-18794805)
chr5 (1-63)||(38502997-38503059)
chr5 (1-62)||(6007844-6007905)
chr5 (1-62)||(11825570-11825631)
chr5 (1-62)||(18465662-18465723)
chr5 (1-62)||(32718097-32718158)
chr5 (1-65)||(1297935-1297999)
chr5 (1-61)||(28463582-28463642)
chr5 (1-61)||(37269360-37269420)
chr5 (2-61)||(19831738-19831797)
chr5 (1-56)||(25027921-25027976)
chr5 (1-63)||(38297813-38297876)
chr5 (1-63)||(12664818-12664880)
chr5 (3-61)||(28619899-28619957)
chr5 (1-63)||(39073004-39073066)
chr5 (1-63)||(40198748-40198810)
chr5 (29-62)||(20202288-20202321)
chr5 (1-58)||(36437458-36437515)
chr5 (1-61)||(38017474-38017528)
chr5 (1-61)||(425091-425151)
chr5 (1-61)||(12784639-12784699)
chr5 (1-61)||(18413467-18413527)
chr5 (1-61)||(20201544-20201604)
chr5 (1-61)||(38363153-38363213)
chr5 (1-61)||(38910236-38910296)
chr5 (1-61)||(42911512-42911572)
chr5 (1-64)||(4985372-4985434)
chr5 (1-63)||(8230000-8230062)
chr5 (28-61)||(248881-248914)
chr5 (4-61)||(3686356-3686412)
chr5 (1-62)||(4427603-4427664)
chr5 (1-62)||(4694725-4694786)
chr5 (1-62)||(6072413-6072474)
chr5 (2-62)||(7403815-7403873)
chr5 (4-61)||(9127551-9127608)
chr5 (4-61)||(12723159-12723216)
chr5 (4-61)||(17557868-17557925)
chr5 (28-61)||(28620647-28620680)
chr5 (4-56)||(14793990-14794042)
chr5 (1-61)||(16124457-16124517)
chr5 (36-64)||(17202977-17203005)
chr5 (3-63)||(25343920-25343980)
chr5 (1-61)||(28024456-28024516)
chr5 (13-61)||(31985259-31985307)
chr5 (1-61)||(40209165-40209225)
[»] chr7 (48 HSPs)
chr7 (2-65)||(39617443-39617506)
chr7 (1-58)||(4963053-4963110)
chr7 (1-61)||(47408118-47408178)
chr7 (1-60)||(30866939-30866998)
chr7 (1-61)||(18470287-18470347)
chr7 (1-61)||(31430539-31430599)
chr7 (1-61)||(32966252-32966312)
chr7 (1-61)||(33100036-33100096)
chr7 (1-62)||(17896726-17896787)
chr7 (1-62)||(20035027-20035088)
chr7 (1-62)||(20045438-20045499)
chr7 (1-61)||(1553495-1553555)
chr7 (1-61)||(3835781-3835840)
chr7 (1-61)||(35793227-35793287)
chr7 (28-63)||(25291075-25291110)
chr7 (1-63)||(7477401-7477463)
chr7 (1-63)||(26723902-26723964)
chr7 (28-62)||(39434553-39434587)
chr7 (28-62)||(46671617-46671651)
chr7 (4-54)||(46672150-46672200)
chr7 (4-61)||(19327992-19328049)
chr7 (2-63)||(27723198-27723259)
chr7 (1-61)||(4567226-4567286)
chr7 (1-61)||(8264927-8264987)
chr7 (1-61)||(12838281-12838341)
chr7 (1-61)||(15643245-15643305)
chr7 (1-65)||(41675389-41675453)
chr7 (1-61)||(42842069-42842129)
chr7 (1-65)||(43874285-43874349)
chr7 (1-60)||(14771526-14771585)
chr7 (1-60)||(15221978-15222037)
chr7 (28-62)||(4962535-4962569)
chr7 (1-51)||(10227246-10227296)
chr7 (28-62)||(24393681-24393715)
chr7 (1-51)||(33173797-33173847)
chr7 (1-63)||(35112407-35112469)
chr7 (1-63)||(45324006-45324068)
chr7 (28-61)||(17270212-17270245)
chr7 (28-61)||(27723881-27723914)
chr7 (30-63)||(28226920-28226953)
chr7 (1-46)||(39430718-39430763)
chr7 (1-62)||(46286048-46286109)
chr7 (1-61)||(3310196-3310256)
chr7 (1-61)||(6799103-6799163)
chr7 (2-62)||(24394343-24394402)
chr7 (2-54)||(37124091-37124143)
chr7 (29-61)||(39426217-39426249)
chr7 (35-63)||(44480379-44480407)
[»] chr4 (69 HSPs)
chr4 (1-63)||(668170-668232)
chr4 (1-62)||(33889487-33889548)
chr4 (1-62)||(48782182-48782243)
chr4 (1-61)||(46871904-46871964)
chr4 (1-61)||(49262924-49262984)
chr4 (1-64)||(13629394-13629457)
chr4 (1-61)||(4201519-4201579)
chr4 (1-61)||(9834247-9834307)
chr4 (1-61)||(31862187-31862247)
chr4 (1-61)||(38617508-38617568)
chr4 (1-61)||(45666211-45666271)
chr4 (1-61)||(46195658-46195718)
chr4 (1-61)||(52677346-52677406)
chr4 (1-61)||(53599987-53600047)
chr4 (4-63)||(43887964-43888023)
chr4 (1-55)||(31984302-31984356)
chr4 (4-62)||(36408705-36408763)
chr4 (4-62)||(36422871-36422929)
chr4 (3-61)||(37502004-37502062)
chr4 (1-62)||(3436268-3436329)
chr4 (1-62)||(17330739-17330800)
chr4 (1-61)||(12252083-12252143)
chr4 (1-61)||(19527409-19527469)
chr4 (1-61)||(22828602-22828662)
chr4 (1-61)||(38840533-38840593)
chr4 (2-62)||(42099690-42099750)
chr4 (1-61)||(44217689-44217749)
chr4 (1-61)||(47751520-47751580)
chr4 (1-61)||(55935090-55935150)
chr4 (1-61)||(56576304-56576364)
chr4 (3-62)||(3802142-3802201)
chr4 (4-63)||(17698549-17698608)
chr4 (4-63)||(24074231-24074290)
chr4 (2-61)||(54982872-54982931)
chr4 (3-61)||(16664224-16664282)
chr4 (5-55)||(23237399-23237449)
chr4 (1-59)||(27492344-27492402)
chr4 (1-63)||(37394360-37394422)
chr4 (4-66)||(50623392-50623454)
chr4 (1-62)||(21044948-21045009)
chr4 (1-62)||(26933972-26934033)
chr4 (1-62)||(34361038-34361099)
chr4 (1-62)||(36750159-36750220)
chr4 (1-46)||(38434352-38434397)
chr4 (1-61)||(5374551-5374611)
chr4 (1-61)||(16464983-16465043)
chr4 (19-63)||(21342338-21342382)
chr4 (1-61)||(29295337-29295397)
chr4 (1-61)||(29833127-29833187)
chr4 (29-61)||(33890207-33890239)
chr4 (2-62)||(35232500-35232559)
chr4 (1-61)||(41502441-41502501)
chr4 (1-61)||(42133020-42133080)
chr4 (1-61)||(44014114-44014174)
chr4 (1-56)||(23719985-23720040)
chr4 (28-63)||(37209528-37209563)
chr4 (2-61)||(53125440-53125499)
chr4 (1-63)||(19443686-19443747)
chr4 (1-63)||(23623696-23623758)
chr4 (28-62)||(37371005-37371039)
chr4 (4-62)||(44069013-44069071)
chr4 (3-61)||(47093795-47093853)
chr4 (1-62)||(9089731-9089792)
chr4 (28-61)||(19443032-19443065)
chr4 (1-62)||(33084460-33084521)
chr4 (1-62)||(33809069-33809130)
chr4 (1-61)||(32239383-32239443)
chr4 (1-61)||(47428512-47428572)
chr4 (1-61)||(53392562-53392621)
[»] chr8 (45 HSPs)
chr8 (1-61)||(29316009-29316069)
chr8 (1-61)||(39303716-39303776)
chr8 (1-62)||(17718482-17718543)
chr8 (1-61)||(2335413-2335473)
chr8 (1-61)||(8731027-8731087)
chr8 (1-61)||(43553443-43553503)
chr8 (4-63)||(3443845-3443904)
chr8 (1-63)||(23429887-23429949)
chr8 (1-62)||(34981808-34981869)
chr8 (1-61)||(3720660-3720720)
chr8 (1-65)||(6750591-6750655)
chr8 (1-65)||(6757382-6757446)
chr8 (1-61)||(7483724-7483784)
chr8 (1-61)||(14263524-14263584)
chr8 (1-61)||(32233540-32233600)
chr8 (1-47)||(3741536-3741582)
chr8 (3-61)||(21651948-21652006)
chr8 (4-62)||(32010306-32010363)
chr8 (4-61)||(2888671-2888728)
chr8 (1-62)||(25703777-25703838)
chr8 (1-62)||(25812948-25813009)
chr8 (1-62)||(26062687-26062748)
chr8 (1-62)||(34046830-34046891)
chr8 (1-57)||(9455149-9455205)
chr8 (1-61)||(15596324-15596384)
chr8 (1-61)||(27518907-27518967)
chr8 (1-61)||(34038819-34038879)
chr8 (4-58)||(18842513-18842567)
chr8 (1-51)||(35296034-35296084)
chr8 (1-62)||(13173908-13173969)
chr8 (1-58)||(16701093-16701150)
chr8 (1-62)||(18291443-18291504)
chr8 (1-62)||(40604051-40604112)
chr8 (1-61)||(2743034-2743094)
chr8 (1-61)||(16393632-16393692)
chr8 (1-61)||(23848756-23848816)
chr8 (2-62)||(36058212-36058272)
chr8 (1-65)||(40521444-40521507)
chr8 (1-60)||(33935260-33935319)
chr8 (1-59)||(38128740-38128798)
chr8 (4-61)||(10180350-10180407)
chr8 (28-61)||(29315221-29315254)
chr8 (1-61)||(9954629-9954689)
chr8 (1-61)||(13327759-13327819)
chr8 (1-61)||(25496561-25496621)
[»] chr6 (31 HSPs)
chr6 (4-64)||(21527445-21527505)
chr6 (1-61)||(26252735-26252795)
chr6 (2-61)||(23777276-23777335)
chr6 (2-64)||(1751633-1751695)
chr6 (4-62)||(17193137-17193195)
chr6 (4-61)||(25056401-25056458)
chr6 (1-61)||(9838323-9838383)
chr6 (1-61)||(23923914-23923974)
chr6 (1-61)||(24635688-24635748)
chr6 (1-64)||(3849042-3849105)
chr6 (2-61)||(7833444-7833503)
chr6 (1-62)||(17835872-17835933)
chr6 (1-62)||(19645873-19645934)
chr6 (4-61)||(26470927-26470984)
chr6 (1-61)||(8176416-8176476)
chr6 (1-61)||(22400765-22400825)
chr6 (4-62)||(8049090-8049148)
chr6 (28-62)||(21526904-21526938)
chr6 (1-62)||(373702-373763)
chr6 (4-61)||(27313480-27313537)
chr6 (1-61)||(24356255-24356315)
chr6 (1-61)||(30388701-30388761)
chr6 (4-61)||(7972753-7972807)
chr6 (1-63)||(364744-364806)
chr6 (1-63)||(9095887-9095949)
chr6 (1-63)||(24663357-24663419)
chr6 (1-61)||(2437953-2438014)
chr6 (2-63)||(8992526-8992587)
chr6 (2-63)||(9016973-9017034)
chr6 (1-62)||(22050028-22050089)
chr6 (1-61)||(34378839-34378899)
[»] chr3 (53 HSPs)
chr3 (1-63)||(21934624-21934686)
chr3 (5-63)||(25842053-25842111)
chr3 (1-62)||(21959797-21959858)
chr3 (1-62)||(53745487-53745548)
chr3 (1-61)||(16237687-16237747)
chr3 (1-61)||(45760068-45760128)
chr3 (3-62)||(7259806-7259865)
chr3 (5-64)||(38751215-38751274)
chr3 (1-62)||(17102733-17102794)
chr3 (1-61)||(41351401-41351461)
chr3 (2-61)||(7328435-7328494)
chr3 (4-63)||(41425607-41425666)
chr3 (28-64)||(7259282-7259318)
chr3 (1-61)||(20841231-20841291)
chr3 (1-65)||(32980616-32980680)
chr3 (1-61)||(34668592-34668652)
chr3 (4-68)||(40319137-40319201)
chr3 (1-61)||(43554370-43554430)
chr3 (1-61)||(47104361-47104421)
chr3 (1-56)||(27039812-27039867)
chr3 (3-62)||(47070065-47070124)
chr3 (1-62)||(790529-790590)
chr3 (1-46)||(2093701-2093746)
chr3 (1-54)||(22174046-22174099)
chr3 (1-54)||(33491345-33491398)
chr3 (1-62)||(42672096-42672157)
chr3 (1-58)||(45646513-45646570)
chr3 (31-63)||(15646433-15646465)
chr3 (1-61)||(19550226-19550286)
chr3 (1-61)||(20105172-20105232)
chr3 (1-65)||(40140035-40140099)
chr3 (1-61)||(45513821-45513881)
chr3 (1-61)||(51064863-51064923)
chr3 (4-64)||(52627447-52627507)
chr3 (1-61)||(54334389-54334448)
chr3 (3-62)||(19234108-19234167)
chr3 (1-64)||(39867055-39867117)
chr3 (1-56)||(50091930-50091985)
chr3 (2-61)||(54898293-54898352)
chr3 (2-56)||(5244142-5244196)
chr3 (28-62)||(21933889-21933923)
chr3 (3-61)||(28885658-28885716)
chr3 (4-63)||(36371037-36371098)
chr3 (4-62)||(52663421-52663479)
chr3 (31-61)||(54675326-54675356)
chr3 (28-61)||(2599660-2599693)
chr3 (1-62)||(13167995-13168056)
chr3 (28-61)||(16236976-16237009)
chr3 (1-62)||(32854154-32854214)
chr3 (28-57)||(38750445-38750474)
chr3 (2-54)||(11473389-11473441)
chr3 (1-61)||(33874752-33874812)
chr3 (1-61)||(54106243-54106303)
[»] chr1 (55 HSPs)
chr1 (2-64)||(1677193-1677255)
chr1 (1-62)||(52414824-52414885)
chr1 (1-61)||(9361953-9362013)
chr1 (3-62)||(4671312-4671371)
chr1 (1-63)||(15660565-15660627)
chr1 (1-62)||(8464646-8464707)
chr1 (1-62)||(31570834-31570895)
chr1 (1-65)||(35531492-35531556)
chr1 (1-56)||(45226774-45226829)
chr1 (3-61)||(19929665-19929723)
chr1 (1-63)||(31588936-31588998)
chr1 (1-63)||(36318331-36318393)
chr1 (1-62)||(1674885-1674945)
chr1 (1-61)||(6295864-6295925)
chr1 (1-62)||(13507749-13507810)
chr1 (1-62)||(13514937-13514998)
chr1 (1-58)||(30279925-30279982)
chr1 (1-61)||(10675882-10675942)
chr1 (1-61)||(11238362-11238422)
chr1 (1-61)||(13699154-13699214)
chr1 (1-61)||(21927893-21927953)
chr1 (1-61)||(30686391-30686451)
chr1 (1-61)||(32768881-32768940)
chr1 (1-61)||(37296922-37296982)
chr1 (1-61)||(37437250-37437310)
chr1 (1-56)||(43952773-43952828)
chr1 (3-61)||(40519328-40519385)
chr1 (1-63)||(52748995-52749057)
chr1 (1-62)||(1429263-1429324)
chr1 (1-62)||(18034023-18034084)
chr1 (1-54)||(35483976-35484029)
chr1 (1-62)||(37609498-37609559)
chr1 (1-62)||(40680638-40680699)
chr1 (4-65)||(48508109-48508170)
chr1 (1-62)||(50825769-50825830)
chr1 (1-65)||(32168509-32168573)
chr1 (1-61)||(40926940-40927000)
chr1 (28-59)||(52415754-52415785)
chr1 (7-61)||(13254884-13254938)
chr1 (4-54)||(35255473-35255523)
chr1 (1-63)||(51613389-51613451)
chr1 (28-61)||(1674238-1674271)
chr1 (28-61)||(4672020-4672053)
chr1 (1-62)||(5597802-5597863)
chr1 (1-50)||(7782942-7782991)
chr1 (28-61)||(11237580-11237613)
chr1 (5-58)||(19093251-19093304)
chr1 (3-55)||(23699573-23699626)
chr1 (28-61)||(32769596-32769629)
chr1 (1-61)||(38597570-38597631)
chr1 (30-62)||(13566655-13566687)
chr1 (1-61)||(28679001-28679061)
chr1 (4-52)||(39386615-39386663)
chr1 (31-63)||(43021042-43021074)
chr1 (1-61)||(44182740-44182800)
[»] chr2 (44 HSPs)
chr2 (1-61)||(1397366-1397426)
chr2 (1-61)||(31025143-31025203)
chr2 (1-63)||(150395-150457)
chr2 (2-60)||(4959500-4959558)
chr2 (1-54)||(2012848-2012901)
chr2 (1-62)||(26342559-26342620)
chr2 (3-64)||(34399179-34399240)
chr2 (1-62)||(41885604-41885665)
chr2 (1-61)||(11074073-11074133)
chr2 (1-61)||(14295960-14296020)
chr2 (1-61)||(27746379-27746439)
chr2 (1-56)||(37093435-37093490)
chr2 (3-61)||(32674191-32674249)
chr2 (1-63)||(35158554-35158616)
chr2 (1-62)||(10812178-10812239)
chr2 (1-66)||(28145775-28145840)
chr2 (1-61)||(11222519-11222579)
chr2 (1-61)||(14288411-14288471)
chr2 (1-61)||(19594331-19594391)
chr2 (3-50)||(5783566-5783613)
chr2 (1-64)||(15677494-15677557)
chr2 (2-61)||(25965992-25966051)
chr2 (1-67)||(9369948-9370014)
chr2 (1-61)||(15507363-15507423)
chr2 (1-61)||(38589419-38589479)
chr2 (28-63)||(20170896-20170931)
chr2 (4-62)||(15183207-15183265)
chr2 (1-59)||(25558386-25558444)
chr2 (1-61)||(1395544-1395605)
chr2 (1-62)||(13753934-13753995)
chr2 (1-62)||(16806668-16806729)
chr2 (1-62)||(16845949-16846010)
chr2 (4-61)||(34357158-34357215)
chr2 (1-54)||(38072429-38072482)
chr2 (28-61)||(42758142-42758175)
chr2 (1-61)||(4654699-4654759)
chr2 (1-61)||(11560250-11560310)
chr2 (1-61)||(13965587-13965647)
chr2 (28-64)||(27747086-27747122)
chr2 (1-61)||(32854983-32855043)
chr2 (28-60)||(33660728-33660760)
chr2 (29-61)||(34424362-34424394)
chr2 (1-53)||(36375559-36375611)
chr2 (1-61)||(43077272-43077332)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-63)||(184328-184390)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-61)||(195939-195999)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-61)||(202234-202294)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-62)||(14922-14983)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-62)||(49126-49187)
[»] scaffold0159 (1 HSPs)
scaffold0159 (3-50)||(37029-37076)
[»] scaffold1130 (2 HSPs)
scaffold1130 (29-62)||(834-867)
scaffold1130 (1-61)||(297-357)
[»] scaffold0001 (1 HSPs)
scaffold0001 (6-65)||(419840-419898)
[»] scaffold1327 (1 HSPs)
scaffold1327 (2-64)||(781-842)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-59)||(147329-147387)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-63)||(272492-272554)
[»] scaffold0040 (1 HSPs)
scaffold0040 (4-61)||(69080-69137)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-62)||(138932-138993)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-61)||(252574-252634)


Alignment Details
Target: chr5 (Bit Score: 54; Significance: 3e-22; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 249683 - 249744
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  249683 cagttaaataggaacaaaaaattcatcctaaaacgacacttaaaaaggaacggagagagtat 249744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 16365700 - 16365643
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  16365700 ttaaataggaacaaaaaattcatcctaaaacgacacttaaaaaggaacggagagagta 16365643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 38702163 - 38702103
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| ||| |||  |||||||||||||||||||||||||||    
T  38702163 cagttaaataggaacaaaaaatttctccaaaattgacacttaaaaaggaacggagggagta 38702103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 5144198 - 5144256
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||||||||||||| ||| |||| |||| |||||||||||||||||||||||    
T  5144198 ttaaataggaacaaaaaatttctccaaaaatgacaattaaaaaggaacggagggagtat 5144256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 42394325 - 42394387
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    |||||||||||||||||||||||| | | |||  |||||||||||||||||||||||||||||    
T  42394325 cagttaaataggaacaaaaaatttcttcaaaagtgacacttaaaaaggaacggagggagtata 42394387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7579865 - 7579926
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||| |||||||||||| ||| |||  ||||||||||||||||||||||||||||    
T  7579865 cagttaaatagaaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagtat 7579926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 11992334 - 11992387
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggag 55  Q
    ||||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  11992334 agttaaataggaacagaaaattcatcctaaaaagacacttaaaaaggaacggag 11992387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36060306 - 36060367
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||||||| ||||||| | | |||||||||||||||||||||||||||| |||||    
T  36060306 cagttaaataggaacgaaaaattcaccttaaaacgacacttaaaaaggaacggaggaagtat 36060367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 43346800 - 43346857
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||| |  |||||||||||||||||||||||||||| |||||    
T  43346800 ttaaataggaacaaaaaattcactctaaaacgacacttaaaaaggaacggagagagta 43346857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4175677 - 4175737
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||| ||| ||| |||  |||||||||||||||||||||||||||    
T  4175677 cagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggagggagta 4175737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 8825079 - 8825015
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataaa 65  Q
    |||||||||| ||||||||||||| ||  |||| |||||||||||||||||||| ||||||||||    
T  8825079 cagttaaatatgaacaaaaaatttctcaaaaaatgacacttaaaaaggaacggaaggagtataaa 8825015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21606455 - 21606515
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| ||| |||  |||| ||||||||||||||||||||||    
T  21606455 cagttaaataggaacaaaaaatttctccaaaagagacatttaaaaaggaacggagggagta 21606515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 26854291 - 26854351
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| ||| |||  ||||||||||||||||| |||||||||    
T  26854291 cagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacagagggagta 26854351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 32440109 - 32440169
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||| ||| |||||||  ||||||||||||||||| |||||||||    
T  32440109 cagttaaataggaacaaaaattttctcctaaagtgacacttaaaaaggaacagagggagta 32440169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 28447182 - 28447241
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||||| ||| ||| |||  |||||||||||||||||||||||||||    
T  28447182 agttaaataggaacaaaaattttctccaaaagagacacttaaaaaggaacggagggagta 28447241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1795314 - 1795376
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    |||||||||  ||||||||||||| ||| |||  |||||||||||||||||||||||||||||    
T  1795314 cagttaaatgagaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagtata 1795376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 10889291 - 10889349
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggag 59  Q
    |||||||||||||||||||| ||| ||| |||  |||||||||||||||||||||||||    
T  10889291 cagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggagggag 10889349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 18794805 - 18794743
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||||| |||||||||||| ||| |||  |||||||||||||||| ||||||||||||    
T  18794805 cagttaaatagaaacaaaaaatttctccaaaagtgacacttaaaaaggaatggagggagtata 18794743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 38502997 - 38503059
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    |||||||||| ||||||||||||| | | |||  |||||||||||||||||||||||||||||    
T  38502997 cagttaaatatgaacaaaaaatttcttcaaaagagacacttaaaaaggaacggagggagtata 38503059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6007905 - 6007844
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||| |||||||||||| ||| |||  |||||||||||||||||||| |||||||    
T  6007905 cagttaaatagaaacaaaaaatttctccaaaagtgacacttaaaaaggaacggatggagtat 6007844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11825570 - 11825631
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||| |||||||||||| | ||| |||||||| |||||||||||||||| ||||||    
T  11825570 cagttaaataagaacaaaaaattcacccttaaacgacaattaaaaaggaacggagagagtat 11825631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18465723 - 18465662
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||| ||| ||| |||  ||||||||||||||||||| ||||||||    
T  18465723 cagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggtgggagtat 18465662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32718097 - 32718158
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||||||| ||||||| | | || || ||||||||||||||||||||||||||||    
T  32718097 cagttaaataggaacgaaaaattcaccatagaaagacacttaaaaaggaacggagggagtat 32718158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 1297935 - 1297999
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataaa 65  Q
    |||||||||||||||||||| ||| ||| |||  |||||||||||| |||||||| |||||||||    
T  1297935 cagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaagaacggagagagtataaa 1297999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28463582 - 28463642
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||  |||||||||||| ||| |||  |||||||||||||||||||||||||||    
T  28463582 cagttaaataaaaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 28463642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 37269420 - 37269360
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||||||||| |  ||||||| ||||||||||||||| |||| |||||    
T  37269420 cagttaaataggaacaaaaaattcactctaaaacaacacttaaaaaggaatggagagagta 37269360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 19831738 - 19831797
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||| |||||||||||| ||  |||| ||||||||||||||||| |||||||||    
T  19831738 agttaaatagaaacaaaaaatttctctaaaaaagacacttaaaaaggaacagagggagta 19831797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25027921 - 25027976
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagg 56  Q
    ||||||||| |||||||||||||| ||| |||  ||||||||||||||||||||||    
T  25027921 cagttaaattggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagg 25027976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 38297813 - 38297876
Alignment:
Q  1 cagttaaataggaacaaaaaa-tttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    |||||||||| |||||||||| ||| ||| |||  |||||||||||||||||||||||||||||    
T  38297813 cagttaaatatgaacaaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagtata 38297876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 12664880 - 12664818
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    |||||||||||||||||||| ||| ||| |||   |||||||||||| |||||||||||||||    
T  12664880 cagttaaataggaacaaaaattttctccaaaagtaacacttaaaaagaaacggagggagtata 12664818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 28619957 - 28619899
Alignment:
Q  3 gttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||| ||||||| | ||||||| |||||||||||| || |||||||||||    
T  28619957 gttaaataggaacgaaaaattcaccctaaaaagacacttaaaaaagaccggagggagta 28619899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 39073066 - 39073004
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||||||||||||   ||| ||| |||  |||||||||||||||||||||||||||||    
T  39073066 cagttaaataggaacaaattttttttccaaaattgacacttaaaaaggaacggagggagtata 39073004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 40198810 - 40198748
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||||| |||||||||||| ||| |||  ||||||||||||||||| |||| ||||||    
T  40198810 cagttaaatagtaacaaaaaatttctccaaaagagacacttaaaaaggaacagaggaagtata 40198748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 20202288 - 20202321
Alignment:
Q  29 taaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||||||||||||||||||||||||||    
T  20202288 taaaacgacacttaaaaaggaacggagggagtat 20202321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 36437458 - 36437515
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggaggga 58  Q
    ||||||||||| ||| ||||||| |||| |||| ||||||||||||| ||||||||||    
T  36437458 cagttaaatagtaacgaaaaattcatccaaaaaagacacttaaaaagaaacggaggga 36437515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38017474 - 38017528
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| |      |||||||||||||||||||||||||||||    
T  38017474 cagttaaataggaacaaaaaatttct------acgacacttaaaaaggaacggagggagta 38017528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 425151 - 425091
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||| || |||||||||||| ||| |||  |||||||||||| ||||||||||||||    
T  425151 cagttaaacagaaacaaaaaatttctccaaaagtgacacttaaaaatgaacggagggagta 425091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12784639 - 12784699
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||  ||| ||| |||| |||| |||||||| |||||||||||||    
T  12784639 cagttaaataggaacaaaatttttctccaaaaatgacagttaaaaagaaacggagggagta 12784699  T

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Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 18413467 - 18413527
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||| ||||| | | ||||||| ||||||||||| ||||| |||||||||    
T  18413467 cagttaaataggaacgaaaaaataaccctaaaaagacacttaaaagggaactgagggagta 18413527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20201604 - 20201544
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||| |||| |||| |  ||||||||||||||||||||||| ||| |||||||||    
T  20201604 cagttaaataagaacgaaaagtccatcctaaaacgacacttaaaaagaaacagagggagta 20201544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 38363213 - 38363153
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||| ||| ||| |||   ||||||||||||||||||| ||||||    
T  38363213 cagttaaataggaacaaaaattttctccaaaagtaacacttaaaaaggaacggatggagta 38363153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 38910296 - 38910236
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||| |||||||||||| ||| |||  |||||||||||| |||||||| |||||    
T  38910296 cagttaaatagaaacaaaaaatttctccaaaagtgacacttaaaaaagaacggagagagta 38910236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 42911572 - 42911512
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||| |||||||| ||| ||| |||  ||||||||||||| |||||||||||||    
T  42911572 cagttaaatagtaacaaaaattttctccaaaagagacacttaaaaagaaacggagggagta 42911512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 4985372 - 4985434
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataa 64  Q
    ||||||||||| ||||||||| |  ||| |||  ||||||||||||||||||||||||||||||    
T  4985372 cagttaaatagaaacaaaaaaatc-tccaaaagagacacttaaaaaggaacggagggagtataa 4985434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 8230000 - 8230062
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    |||||||||||||| ||||||||| | | |||  |||||||||||||||||| | ||||||||    
T  8230000 cagttaaataggaataaaaaatttcttcaaaatagacacttaaaaaggaacgaaaggagtata 8230062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 248914 - 248881
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||||||||| ||||||||||    
T  248914 ctaaaacgacacttaaaaaggaatggagggagta 248881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 3686412 - 3686356
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||| |  ||| |||  |||||||||||||||||||||||||||    
T  3686412 ttaaataggaacaaaaaaatc-tccaaaagtgacacttaaaaaggaacggagggagta 3686356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4427603 - 4427664
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||| |||| ||||||||||||| ||| |||   |||||||||||||||||||| ||||||    
T  4427603 cagttgaatatgaacaaaaaatttctccaaaagaaacacttaaaaaggaacggagagagtat 4427664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4694786 - 4694725
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||| |||||||||| || ||| |||  || ||||||||| |||||||||||||||    
T  4694786 cagttaaatatgaacaaaaaaattctccaaaagagatacttaaaaatgaacggagggagtat 4694725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6072474 - 6072413
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||| ||||||||| ||| ||| |||  ||| ||||||||| ||||||||||||||    
T  6072474 cagttaaataagaacaaaaattttctccaaaagtgacgcttaaaaagaaacggagggagtat 6072413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 7403873 - 7403815
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||| ||||||||||||| ||  |||  |||||||| |||||||||||||||||||    
T  7403873 agttaaatatgaacaaaaaatttctc--aaagtgacacttataaaggaacggagggagtat 7403815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 9127551 - 9127608
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||| |||||||||||||   | |||  |||||||||||||||||||||||||||    
T  9127551 ttaaatacgaacaaaaaatttcatcaaaatagacacttaaaaaggaacggagggagta 9127608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 12723159 - 12723216
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||  ||| ||| |||| |||| |||||||||||| |||||||||    
T  12723159 ttaaataggaacaaaatttttctccaaaaatgacagttaaaaaggaacagagggagta 12723216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 17557925 - 17557868
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||| ||||||| | ||||||| ||||||||||||| ||| || ||||||    
T  17557925 ttaaataggaacgaaaaattcaccctaaaaagacacttaaaaagaaacagatggagta 17557868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 28620647 - 28620680
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||| |||||||||||||||||||||||||||    
T  28620647 ctaaaaagacacttaaaaaggaacggagggagta 28620680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 14793990 - 14794042
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagg 56  Q
    |||||||| |||||||||||| ||| |||  |||| |||||||||||||||||    
T  14793990 ttaaatagaaacaaaaaatttctccaaaacagacatttaaaaaggaacggagg 14794042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16124457 - 16124517
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||| || ||||||||||| | |||  || ||||||||| ||||||||||||||    
T  16124457 cagttaaatagtaataaaaaatttattcaaaagagatacttaaaaatgaacggagggagta 16124517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 64
Target Start/End: Original strand, 17202977 - 17203005
Alignment:
Q  36 acacttaaaaaggaacggagggagtataa 64  Q
    |||||||||||||||||||||||||||||    
T  17202977 acacttaaaaaggaacggagggagtataa 17203005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 25343980 - 25343920
Alignment:
Q  3 gttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||| |||||||| ||| ||| |||  |||||||| ||||||||||| ||||||||    
T  25343980 gttaaatagaaacaaaaattttctccaaaagtgacacttacaaaggaacggaaggagtata 25343920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28024456 - 28024516
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||  ||| ||| |||  ||||||||||||||||| ||| |||||    
T  28024456 cagttaaataggaacaaaatttttctccaaaagagacacttaaaaaggaacagagagagta 28024516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 31985259 - 31985307
Alignment:
Q  13 aacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||| |||  ||  |||||||||||||||||||||||||||    
T  31985259 aacaaaaaatttctccgcaagagacacttaaaaaggaacggagggagta 31985307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 40209165 - 40209225
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| |||  ||  ||||||||| ||  |||||||||||||    
T  40209165 cagttaaataggaacaaaaaatttctccagaagtgacacttaataaaaaacggagggagta 40209225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 5e-21; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 39617506 - 39617443
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataaa 65  Q
    |||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||    
T  39617506 agttaaataggaacaaaaaattcaccctaaaaagacacttaaaaaggaacggagggagtataaa 39617443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4963053 - 4963110
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggaggga 58  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  4963053 cagttaaataggaacaaaaaattcaccctaaaacgacacttaaaaaggaacggaggga 4963110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 47408178 - 47408118
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| ||| |||  |||||||||||||||||||||||||||    
T  47408178 cagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 47408118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 30866939 - 30866998
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagt 60  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||| |||||||||||||    
T  30866939 cagttaaataggaacaaaaaatttctccaaaaatgacacttaaaaaagaacggagggagt 30866998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18470347 - 18470287
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||| ||||||||||||| ||| |||  |||||||||||||||||||||||||||    
T  18470347 cagttaaataagaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 18470287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 31430599 - 31430539
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| | | |||  |||||||||||||||||||||||||||    
T  31430599 cagttaaataggaacaaaaaatttctacaaaagtgacacttaaaaaggaacggagggagta 31430539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 32966252 - 32966312
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||| ||||||||| ||| |||  |||||||||||||||||||||||||||    
T  32966252 cagttaaataggaataaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 32966312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33100036 - 33100096
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| ||| |||  |||||||||||| ||||||||||||||    
T  33100036 cagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaagaacggagggagta 33100096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17896726 - 17896787
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||  ||| ||| |||  ||||||||||||||||||||||||||||    
T  17896726 cagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagtat 17896787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20035088 - 20035027
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||||||| | | |||  |||||||||||||||||||| |||||||    
T  20035088 cagttaaataggaacaaaaaatttctgcaaaagtgacacttaaaaaggaacggatggagtat 20035027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20045499 - 20045438
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||||||| | | |||  |||||||||||||||||||| |||||||    
T  20045499 cagttaaataggaacaaaaaatttctgcaaaagtgacacttaaaaaggaacggatggagtat 20045438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1553555 - 1553495
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| ||| |||  |||  ||||||||||||||||||||||    
T  1553555 cagttaaataggaacaaaaaatttctccaaaagagacgattaaaaaggaacggagggagta 1553495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3835781 - 3835840
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||| |||| || | ||||||| |||||||||||||||||||||||||||    
T  3835781 cagttaaataggaacgaaaa-ttcaacctaaaaagacacttaaaaaggaacggagggagta 3835840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35793227 - 35793287
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||| | ||||||| | ||||||| |||||||||||| ||||||||||||||    
T  35793227 cagttaaataggagctaaaaattcaccctaaaaagacacttaaaaaagaacggagggagta 35793287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 25291075 - 25291110
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||||||||||||||||||||||||||||||    
T  25291075 ctaaaacgacacttaaaaaggaacggagggagtata 25291110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 7477401 - 7477463
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    |||||||||||||||||||| ||| | | |||  ||||||||||||||||| |||||||||||    
T  7477401 cagttaaataggaacaaaaattttcttcaaaagagacacttaaaaaggaactgagggagtata 7477463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 26723964 - 26723902
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||||| ||||||||| || ||| |||  |||||||||||||||| ||||||||||||    
T  26723964 cagttaaatagaaacaaaaaaattctccgaaagagacacttaaaaaggaatggagggagtata 26723902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 39434553 - 39434587
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||||||||||||||||||    
T  39434553 ctaaaacgacacttaaaaaggaacggagggagtat 39434587  T

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Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 46671651 - 46671617
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||||||||||||||||||    
T  46671651 ctaaaacgacacttaaaaaggaacggagggagtat 46671617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 46672150 - 46672200
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacgga 54  Q
    ||||||||||||||||||||||  |||||| ||||||||||| ||||||||    
T  46672150 ttaaataggaacaaaaaatttacactaaaatgacacttaaaagggaacgga 46672200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 19327992 - 19328049
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||||  | ||| |||| ||||||||||||| |||||||||||||    
T  19327992 ttaaataggaacaaaaaaaatctccaaaaaagacacttaaaaagaaacggagggagta 19328049  T

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Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 27723259 - 27723198
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||||||||||||||||   ||||||| |||||||||||| ||| ||||||| ||||    
T  27723259 agttaaataggaacaaaaaattcgccctaaaaagacacttaaaaatgaatggagggaatata 27723198  T

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Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4567286 - 4567226
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||| ||||||| | ||||| | | ||||| |||||||||||||||||||||||||||    
T  4567286 cagttaattaggaacgacaaattcaccataaaaagacacttaaaaaggaacggagggagta 4567226  T

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Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8264987 - 8264927
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||| ||| ||  |||  |||||||||||||||||||| ||||||    
T  8264987 cagttaaataggaacaaaaattttctctaaaagtgacacttaaaaaggaacggaaggagta 8264927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12838281 - 12838341
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||| |||||||  ||| ||| |||  |||||||||||||||||||||||||||    
T  12838281 cagttaaatagaaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagta 12838341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15643305 - 15643245
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||| ||| ||||||| |||||||||  |||||||||| | |||||||||||||    
T  15643305 cagttaaatagaaacgaaaaattcatcctaaaaaaacacttaaaaggaaacggagggagta 15643245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 41675389 - 41675453
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataaa 65  Q
    |||||||| | ||||||||| ||| | | |||  |||||||||||||||||||||||||||||||    
T  41675389 cagttaaacaagaacaaaaattttctgcaaaagtgacacttaaaaaggaacggagggagtataaa 41675453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 42842069 - 42842129
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| ||  |||  |||| ||||||||||||||| ||||||    
T  42842069 cagttaaataggaacaaaaaatttctctaaaagtgacaattaaaaaggaacggatggagta 42842129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 43874285 - 43874349
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataaa 65  Q
    ||||||||||||||||||||| || ||  |||  ||||||||||||| |||||| ||||||||||    
T  43874285 cagttaaataggaacaaaaaaattctctaaaagtgacacttaaaaagaaacggatggagtataaa 43874349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14771526 - 14771585
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagt 60  Q
    ||||||||||||||| ||||||| | |||||||  ||||||||||| |||| ||||||||    
T  14771526 cagttaaataggaacgaaaaattcaccctaaaaaaacacttaaaaaagaacagagggagt 14771585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 15221978 - 15222037
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagt 60  Q
    ||||||||||||||| ||||||| | |||||||  ||||||||||| |||| ||||||||    
T  15221978 cagttaaataggaacgaaaaattcaccctaaaaaaacacttaaaaaagaacagagggagt 15222037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 4962569 - 4962535
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||| ||||||||||||||||||||||||||    
T  4962569 ctaaaacggcacttaaaaaggaacggagggagtat 4962535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 10227296 - 10227246
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaac 51  Q
    |||||||||||||||||||||||| | | |||  |||||||||||||||||    
T  10227296 cagttaaataggaacaaaaaatttcttcaaaagagacacttaaaaaggaac 10227246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 24393715 - 24393681
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||| ||||||||||||||    
T  24393715 ctaaaacgacacttaaaaagaaacggagggagtat 24393681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 33173847 - 33173797
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaac 51  Q
    |||||||||||||||||||||||| | | |||  |||||||||||||||||    
T  33173847 cagttaaataggaacaaaaaatttcttcaaaagagacacttaaaaaggaac 33173797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 35112469 - 35112407
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||| | |||||||  ||| ||| |||  |||||||||||||||||||||||||||||    
T  35112469 cagttaaattgaaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagtata 35112407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 45324068 - 45324006
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||||| ||||||||| || ||| |||  ||||||| |||||||||||||||| ||||    
T  45324068 cagttaaatagaaacaaaaaaattctccaaaagagacacttgaaaaggaacggagggaatata 45324006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 17270212 - 17270245
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||||||||||| ||||||||    
T  17270212 ctaaaacgacacttaaaaaggaacgaagggagta 17270245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 27723881 - 27723914
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||| |||||||||||||||||||    
T  27723881 ctaaaacgacacttcaaaaggaacggagggagta 27723914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 28226920 - 28226953
Alignment:
Q  30 aaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||||||||||| ||||||||||||||||    
T  28226920 aaaacgacacttaaaaatgaacggagggagtata 28226953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 39430718 - 39430763
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaa 46  Q
    ||||||||||||||| ||||||| | | ||||||||||||||||||    
T  39430718 cagttaaataggaacgaaaaattcaccttaaaacgacacttaaaaa 39430763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 46286048 - 46286109
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||| ||||||||||||| ||| |||  |||| ||||||| ||||||||| |||||    
T  46286048 cagttaaataagaacaaaaaatttctccaaaagtgacagttaaaaaagaacggaggaagtat 46286109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 3310256 - 3310196
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||  |||||||||  | ||| |||  |||||||||||||||||||||||||||    
T  3310256 cagttaaataaaaacaaaaaaaatctccaaaagagacacttaaaaaggaacggagggagta 3310196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6799163 - 6799103
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||  ||||||||||||| ||| |||  |||||||||||| ||| ||||||||||    
T  6799163 cagttaaatgagaacaaaaaatttctccaaaacagacacttaaaaatgaatggagggagta 6799103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 24394343 - 24394402
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||| |||| || | |||||||  |||||||||||||||| ||||||||||    
T  24394343 agttaaataggaacgaaaagttcaccctaaaaa-acacttaaaaaggaaccgagggagtat 24394402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 37124143 - 37124091
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacgga 54  Q
    ||||||| |||||| ||||||| |  |||||| ||||||||||||||||||||    
T  37124143 agttaaaaaggaacgaaaaattcacactaaaaagacacttaaaaaggaacgga 37124091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 61
Target Start/End: Complemental strand, 39426249 - 39426217
Alignment:
Q  29 taaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||| |||||||||||||||||||||||||||    
T  39426249 taaaatgacacttaaaaaggaacggagggagta 39426217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 63
Target Start/End: Original strand, 44480379 - 44480407
Alignment:
Q  35 gacacttaaaaaggaacggagggagtata 63  Q
    |||||||||||||||||||||||||||||    
T  44480379 gacacttaaaaaggaacggagggagtata 44480407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 668170 - 668232
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    |||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  668170 cagttagataggaacaaaaaattcaccctaaaacgacacttaaaaaggaacggagggagtata 668232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 33889548 - 33889487
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||    
T  33889548 cagttaaataggaacaaaaaattcaccctaaaacgacacttaaaaaggaacggagagagtat 33889487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 48782243 - 48782182
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||    
T  48782243 cagttaaataggaacaaaaaatttatccaaaagtgacacttaaaaagaaacggagggagtat 48782182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 46871964 - 46871904
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||||||| |||  |||||||||||||||||||||| ||||    
T  46871964 cagttaaataggaacaaaaaatttatccaaaagtgacacttaaaaaggaacggaggaagta 46871904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 49262984 - 49262924
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||||||||| | ||||||| |||| ||||||||||||||||||||||    
T  49262984 cagttaaataggaacaaaaaattcaccctaaaaagacatttaaaaaggaacggagggagta 49262924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 13629394 - 13629457
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataa 64  Q
    |||||||||||||||||||||||| | | |||  ||||||||||||||||||||||||||||||    
T  13629394 cagttaaataggaacaaaaaatttctacaaaagtgacacttaaaaaggaacggagggagtataa 13629457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4201519 - 4201579
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| | | |||  |||||||||||||||||||||||||||    
T  4201519 cagttaaataggaacaaaaaatttcttcaaaagagacacttaaaaaggaacggagggagta 4201579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9834307 - 9834247
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| ||| |||  ||||||||||||||||| |||||||||    
T  9834307 cagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaactgagggagta 9834247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31862187 - 31862247
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||| ||| ||| |||  |||||||||||||||||||||||||||    
T  31862187 cagttaaataggaacaaaaattttctccaaaagagacacttaaaaaggaacggagggagta 31862247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38617508 - 38617568
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||||| |||| ||| |||  |||||||||||||||||||||||||||    
T  38617508 cagttaaataggaacaaaatatttctccaaaagtgacacttaaaaaggaacggagggagta 38617568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 45666271 - 45666211
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||| |||| ||||||| ||||||||| ||||||||||||| |||||||||||||    
T  45666271 cagttaaatatgaacgaaaaattcatcctaaaaagacacttaaaaagaaacggagggagta 45666211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 46195718 - 46195658
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||||||||| | ||||||| ||||||| ||||||||| |||||||||    
T  46195718 cagttaaataggaacaaaaaattcaccctaaaaagacacttgaaaaggaacagagggagta 46195658  T

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Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 52677346 - 52677406
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| ||  |||  |||||||||||||||||||||||||||    
T  52677346 cagttaaataggaacaaaaaatttctctaaaagtgacacttaaaaaggaacggagggagta 52677406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 53599987 - 53600047
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||  ||| ||| |||| |||||||||||||||||||||||||||    
T  53599987 cagttaaataggaacaaaatttttctccaaaaatgacacttaaaaaggaacggagggagta 53600047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 43888023 - 43887964
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||||||||||||||||||  |||  |||| ||||||||||||||||||||||||    
T  43888023 ttaaataggaacaaaaaatttatctaaaagtgacaattaaaaaggaacggagggagtata 43887964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 31984302 - 31984356
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggag 55  Q
    |||||||||||||||||||||||| ||| |||  |||||||||||||||||||||    
T  31984302 cagttaaataggaacaaaaaatttctccaaaagagacacttaaaaaggaacggag 31984356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 36408763 - 36408705
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||||||||| ||| ||| |||  ||||||||||||||||||||||||||||    
T  36408763 ttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggagggagtat 36408705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 36422929 - 36422871
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||||||||| ||| ||| |||  ||||||||||||||||||||||||||||    
T  36422929 ttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggagggagtat 36422871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 37502062 - 37502004
Alignment:
Q  3 gttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||| |||||||||||| ||| |||  |||||||||||||||||||||||||||    
T  37502062 gttaaatagaaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 37502004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3436268 - 3436329
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||  ||| ||| |||  ||||||||||||||||||||||||||||    
T  3436268 cagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagtat 3436329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17330800 - 17330739
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||||||| ||||||| | | ||||| |||||||||||| |||||||||||||||    
T  17330800 cagttaaataggaacgaaaaattcaccataaaaagacacttaaaaaagaacggagggagtat 17330739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12252143 - 12252083
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||| ||| | | |||  |||||||||||||||||||||||||||    
T  12252143 cagttaaataggaacaaaaattttcttcaaaagtgacacttaaaaaggaacggagggagta 12252083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19527409 - 19527469
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||| ||| ||| |||  ||||||||||||| |||||||||||||    
T  19527409 cagttaaataggaacaaaaattttctccaaaagtgacacttaaaaagaaacggagggagta 19527469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22828602 - 22828662
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||| ||||||||| || ||| |||  |||||||||||||||||||||||||||    
T  22828602 cagttaaatagaaacaaaaaaattctccaaaagagacacttaaaaaggaacggagggagta 22828662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38840533 - 38840593
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||||||||| |   ||||| || ||||||||||||||||||||||||    
T  38840533 cagttaaataggaacaaaaaattcactttaaaaagatacttaaaaaggaacggagggagta 38840593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 42099750 - 42099690
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||| ||||||||| || ||| |||  ||||||||||||||||||||||||||||    
T  42099750 agttaaatagaaacaaaaaaattctccaaaagagacacttaaaaaggaacggagggagtat 42099690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 44217749 - 44217689
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||| |||||||||||| ||| |||  ||||||||||||||||||||| |||||    
T  44217749 cagttaaatagaaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagagagta 44217689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 47751580 - 47751520
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||| |||||||||||||| ||| |||  |||||||||||||||||||| ||||||    
T  47751580 cagttaaattggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggaaggagta 47751520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 55935150 - 55935090
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||| |||||||||||| ||| ||||  ||||||||||||||||||| ||||||    
T  55935150 cagttaaatagaaacaaaaaatttctccaaaaataacacttaaaaaggaacggatggagta 55935090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 56576304 - 56576364
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||  ||| ||| |||  |||||||||||||||||||||||||||    
T  56576304 cagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagta 56576364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 3802201 - 3802142
Alignment:
Q  3 gttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||| ||| |||||||||||||| | |||| |||| |||||||||||||||||||||||    
T  3802201 gttaattagaaacaaaaaatttatgcaaaaatgacaattaaaaaggaacggagggagtat 3802142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 17698608 - 17698549
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    |||||||| |||||||||||| | | ||||||||||| |||||||||| |||||||||||    
T  17698608 ttaaatagaaacaaaaaatttcttcaaaaacgacactaaaaaaggaacagagggagtata 17698549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 24074231 - 24074290
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    |||||||||||| ||||||| | ||||||| ||||||||||||| ||| |||||||||||    
T  24074231 ttaaataggaacgaaaaattcaccctaaaaagacacttaaaaagaaactgagggagtata 24074290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 54982872 - 54982931
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||| |||| ||||||| | ||||||| ||||||||||||||||| |||||||||    
T  54982872 agttaaatatgaacgaaaaattcaccctaaaaagacacttaaaaaggaacagagggagta 54982931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 16664282 - 16664224
Alignment:
Q  3 gttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||| |||||| |||| ||| |||  |||||||||||||||||||||||||||    
T  16664282 gttaaatagggacaaaatatttctccaaaagtgacacttaaaaaggaacggagggagta 16664224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 23237449 - 23237399
Alignment:
Q  5 taaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggag 55  Q
    ||||||||||||||||| || ||| |||| |||||||||||||||||||||    
T  23237449 taaataggaacaaaaaaattctccaaaaatgacacttaaaaaggaacggag 23237399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 27492402 - 27492344
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggag 59  Q
    |||||||||||||||||||| ||| ||| |||  ||||||||||||| |||||||||||    
T  27492402 cagttaaataggaacaaaaattttctccaaaagtgacacttaaaaagaaacggagggag 27492344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 37394360 - 37394422
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||||| |||||||||||| ||| |||| |||| ||| |||||||||||| |||||||    
T  37394360 cagttaaatagaaacaaaaaatttctccaaaaatgacatttagaaaggaacggagagagtata 37394422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 50623454 - 50623392
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataaag 66  Q
    |||||||| ||||||   ||| |||||||  ||||||||||||||||||||||||||||||||    
T  50623454 ttaaatagaaacaaattttttctcctaaagtgacacttaaaaaggaacggagggagtataaag 50623392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21044948 - 21045009
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||| ||| ||  |||  ||||||||||||||||| ||||||||||    
T  21044948 cagttaaataggaacaaaaattttctcaaaaagtgacacttaaaaaggaactgagggagtat 21045009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 26933972 - 26934033
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||| | |||||||||||| ||| ||||  || ||||||||||||||||||||||||    
T  26933972 cagttaaattgaaacaaaaaatttctccaaaaataacgcttaaaaaggaacggagggagtat 26934033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34361099 - 34361038
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||||||| ||  |||  |||| |||||||| ||||||||||||||    
T  34361099 cagttaaataggaacaaaaaatttctctaaaagtgacaattaaaaagaaacggagggagtat 34361038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 36750220 - 36750159
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||||||| | | |||  ||||||||||||||||| |||| |||||    
T  36750220 cagttaaataggaacaaaaaatttcttcaaaagtgacacttaaaaaggaacagaggaagtat 36750159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38434352 - 38434397
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaa 46  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||||    
T  38434352 cagttaaataggaacgaaaaattcaccctaaaacgacacttaaaaa 38434397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5374551 - 5374611
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||| | ||||||||||||| ||| |||  ||||||||||||| |||||||||||||    
T  5374551 cagttaaacaagaacaaaaaatttctccaaaagtgacacttaaaaagaaacggagggagta 5374611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16464983 - 16465043
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||| |||||||||||| | | |||  |||||||||||||||||||| ||||||    
T  16464983 cagttaaatagtaacaaaaaatttcttcaaaagtgacacttaaaaaggaacggatggagta 16465043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 21342338 - 21342382
Alignment:
Q  19 aaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||| |||||||||  ||||||||||||||||||||||||||||    
T  21342338 aaattcatcctaaaaaaacacttaaaaaggaacggagggagtata 21342382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29295397 - 29295337
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||  ||| ||| |||  |||||||||||||||| ||||||||||    
T  29295397 cagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaaaggagggagta 29295337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 29833127 - 29833187
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||| |||||| ||| |||  |||||||||||| ||||||||| ||||    
T  29833127 cagttaaataggaacaagaaatttctccaaaagagacacttaaaaatgaacggaggaagta 29833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 61
Target Start/End: Original strand, 33890207 - 33890239
Alignment:
Q  29 taaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||||||||||||    
T  33890207 taaaacgacacttaaaaaggaacggagggagta 33890239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 35232500 - 35232559
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||| |||| ||| ||| |||| |||||||||||||||||||||| |||||    
T  35232500 agttaaataggaaccaaaattttctcc-aaaatgacacttaaaaaggaacggaggaagtat 35232559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41502501 - 41502441
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||| |||||||||||| | | ||||| ||||||||||||| |||||| ||||||    
T  41502501 cagttaaataagaacaaaaaattaaccttaaaatgacacttaaaaagaaacggatggagta 41502441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 42133080 - 42133020
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| ||  |||  |||  ||||||||||||||||||||||    
T  42133080 cagttaaataggaacaaaaaatttctctaaaagtgacgattaaaaaggaacggagggagta 42133020  T

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Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 44014114 - 44014174
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||||   ||| ||| |||| ||||| |||||||||||||||||||||    
T  44014114 cagttaaataggaacaaattttttctccaaaaatgacacataaaaaggaacggagggagta 44014174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 23719985 - 23720040
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagg 56  Q
    |||||||| ||||||||||||||| ||  |||  ||||||||||||||||||||||    
T  23719985 cagttaaacaggaacaaaaaatttctctaaaagtgacacttaaaaaggaacggagg 23720040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 37209563 - 37209528
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    |||||| |||||||||||||||||||||||||||||    
T  37209563 ctaaaaagacacttaaaaaggaacggagggagtata 37209528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 53125440 - 53125499
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||| ||||||||| || ||| |||  |||||||||||||||||||| ||||||    
T  53125440 agttaaatagaaacaaaaaaattctccaaaagagacacttaaaaaggaacggatggagta 53125499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 19443686 - 19443747
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||||||||| ||||||| | | ||||| ||||||| ||||| |||||||||||||||    
T  19443686 cagttaaataggaacgaaaaattcaccataaaaagacactt-aaaagaaacggagggagtata 19443747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 23623696 - 23623758
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||||| |||||||| ||| ||  |||  |||||||||||||||||||||||| ||||    
T  23623696 cagttaaatagtaacaaaaattttctcaaaaagtgacacttaaaaaggaacggagggattata 23623758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 37371039 - 37371005
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||||||||||||||||||| |||||||    
T  37371039 ctaaaacgacacttaaaaaggaacggatggagtat 37371005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 44069071 - 44069013
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||||||||  ||| | | |||  ||||||||||||||||||||||||||||    
T  44069071 ttaaataggaacaaaatttttctacaaaagtgacacttaaaaaggaacggagggagtat 44069013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 47093853 - 47093795
Alignment:
Q  3 gttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||| | | |||  |||||||||||||||| ||||| ||||    
T  47093853 gttaaataggaacaaaaaatttcttcaaaagtgacacttaaaaaggaatggaggaagta 47093795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9089731 - 9089792
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||||||| ||||  | | ||||||| ||||||||||||| |||||| |||||||    
T  9089731 cagttaaataggaacgaaaatatcaccctaaaaagacacttaaaaagaaacggatggagtat 9089792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 19443065 - 19443032
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||| |||||||||||||||||||||||||||    
T  19443065 ctaaaaagacacttaaaaaggaacggagggagta 19443032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 33084521 - 33084460
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||| ||||||||| ||| | | |||  ||||||||||||| ||||||||||||||    
T  33084521 cagttaaataagaacaaaaagtttcttcaaaagagacacttaaaaagaaacggagggagtat 33084460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 33809130 - 33809069
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||| ||||||||| ||| ||| |||  |||| |||||||||||||||| ||||||    
T  33809130 cagttaaataagaacaaaaattttctccaaaagtgacaattaaaaaggaacggagagagtat 33809069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32239443 - 32239383
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||| ||||||||  ||| ||| |||  |||| ||||||||||||||||||||||    
T  32239443 cagttaaatatgaacaaaatttttctccaaaagtgacatttaaaaaggaacggagggagta 32239383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 47428572 - 47428512
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||  ||| ||| |||  |||||||| ||||||| ||||||||||    
T  47428572 cagttaaataggaacaaaatttttctccaaaagtgacacttataaaggaatggagggagta 47428512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 53392621 - 53392562
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||| ||||||| | | |||||  ||||||||||||||||||| ||||||    
T  53392621 cagttaaataggaacgaaaaattcaccataaaaa-acacttaaaaaggaacggaaggagta 53392562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 3e-19; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 29316009 - 29316069
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||    
T  29316009 cagttaaataggaataaaaaattcaccctaaaacgacacttaaaaaggaacggagggagta 29316069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 39303716 - 39303776
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||    
T  39303716 cagttaaataggaacaaaaaatttctccaaaaatgacacttaaaaaggaacggagggagta 39303776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17718543 - 17718482
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||||||||||| |||  |||| |||||||||||||||||||||||    
T  17718543 cagttaaataggaacaaaaaatttatccaaaagtgacaattaaaaaggaacggagggagtat 17718482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2335473 - 2335413
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||||||||||| ||||||    
T  2335473 cagttaaataggaacaaaaaatttctccaaaaatgacacttaaaaaggaacggatggagta 2335413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8731027 - 8731087
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| ||| |||| |||||||| ||||||||||||||||||    
T  8731027 cagttaaataggaacaaaaaatttctccaaaaatgacacttagaaaggaacggagggagta 8731087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 43553443 - 43553503
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| ||| |||  |||||||||||||||||||||||||||    
T  43553443 cagttaaataggaacaaaaaatttctccaaaagagacacttaaaaaggaacggagggagta 43553503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 3443845 - 3443904
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    |||||||||||  ||||||| ||||||||| |||||||||||||||||||||||||||||    
T  3443845 ttaaataggaatgaaaaattcatcctaaaaagacacttaaaaaggaacggagggagtata 3443904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 23429949 - 23429887
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    |||||||||||||||||||| ||| ||| |||  |||||||||||||||||||||||||||||    
T  23429949 cagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggagggagtata 23429887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34981869 - 34981808
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||| |||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||    
T  34981869 cagttaagtaggaacaaaaaatttctccaaaagcgacacttaaaaagtaacggagggagtat 34981808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 3720720 - 3720660
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||||| | |||  |||| ||||||||||||||||||||||    
T  3720720 cagttaaataggaacaaaaaatttattcaaaagtgacaattaaaaaggaacggagggagta 3720660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6750655 - 6750591
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataaa 65  Q
    |||||||||||||||||||||||| ||| |||| |||| |||||||||||| ||||||| |||||    
T  6750655 cagttaaataggaacaaaaaatttctccaaaaatgacaattaaaaaggaacagagggagcataaa 6750591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6757446 - 6757382
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataaa 65  Q
    |||||||||||||||||||||||| ||| |||| |||| |||||||||||| ||||||| |||||    
T  6757446 cagttaaataggaacaaaaaatttctccaaaaatgacaattaaaaaggaacagagggagcataaa 6757382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7483784 - 7483724
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||| ||||||||||||||||||| ||| |||| |||||||||||||||||||| ||||||    
T  7483784 cagtgaaataggaacaaaaaatttctccaaaaatgacacttaaaaaggaacggatggagta 7483724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14263584 - 14263524
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||| ||| ||| |||  |||||||||||||||||||||||||||    
T  14263584 cagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggagggagta 14263524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32233600 - 32233540
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||| ||||||| | ||||||| |||||||||||||||||| ||||||||    
T  32233600 cagttaaataggaacgaaaaattcaccctaaaaagacacttaaaaaggaacgaagggagta 32233540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 3741582 - 3741536
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaag 47  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||    
T  3741582 cagttaaataggaacaaaaaattcaccctaaaacgacacttaaaaag 3741536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 21651948 - 21652006
Alignment:
Q  3 gttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||| | | |||| ||||||||||||||||||||| |||||    
T  21651948 gttaaataggaacaaaaaatttcttcaaaaaagacacttaaaaaggaacggagagagta 21652006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 32010306 - 32010363
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||||||| |||||||    
T  32010306 ttaaataggaacaaaaaatttctccaaaaa-gacacttaaaaaggaacggatggagtat 32010363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 2888671 - 2888728
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||| || ||| |||  |||||||||||||||||||||||||||    
T  2888671 ttaaataggaacaaaaaaattctccaaaagagacacttaaaaaggaacggagggagta 2888728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25703777 - 25703838
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||||||||||| |||| | | |||  ||||||||||||||||||||||||||||    
T  25703777 cagttaaataggaacaaaatatttcttcaaaagtgacacttaaaaaggaacggagggagtat 25703838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25812948 - 25813009
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||||||||||| |||| | | |||  ||||||||||||||||||||||||||||    
T  25812948 cagttaaataggaacaaaatatttcttcaaaagtgacacttaaaaaggaacggagggagtat 25813009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26062748 - 26062687
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||||||||||||| || ||  |||| ||||||||||||||||||||| ||||||    
T  26062748 cagttaaataggaacaaaaaaattttctaaaaatgacacttaaaaaggaacggagagagtat 26062687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34046891 - 34046830
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||| |||||||||||| ||  |||  ||||||||||||||||||||||||||||    
T  34046891 cagttaaatagaaacaaaaaatttctctaaaagtgacacttaaaaaggaacggagggagtat 34046830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9455205 - 9455149
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggaggg 57  Q
    ||||||||||||||||||||||| | ||||||| ||||||||||||| || ||||||    
T  9455205 cagttaaataggaacaaaaaattcaacctaaaaagacacttaaaaagaaaaggaggg 9455149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15596384 - 15596324
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||| ||||||||| || ||| |||  |||||||||||||||||||||||||||    
T  15596384 cagttaaatagaaacaaaaaaattctccaaaagagacacttaaaaaggaacggagggagta 15596324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 27518907 - 27518967
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| | | |||  ||||||||||||||||||||| |||||    
T  27518907 cagttaaataggaacaaaaaatttcttcaaaagagacacttaaaaaggaacggagagagta 27518967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34038879 - 34038819
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||| |||||| |   ||||||||| ||||||||||||||||||||||||    
T  34038879 cagttaaataggaacgaaaaatctgcactaaaacgatacttaaaaaggaacggagggagta 34038819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 18842567 - 18842513
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggaggga 58  Q
    |||||||||||||||||| || ||| |||  ||||||||||||||||||||||||    
T  18842567 ttaaataggaacaaaaaaattctccaaaagtgacacttaaaaaggaacggaggga 18842513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35296084 - 35296034
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaac 51  Q
    |||||||||||||||||||||||| | |||||  |||||||||||||||||    
T  35296084 cagttaaataggaacaaaaaatttctactaaagtgacacttaaaaaggaac 35296034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13173969 - 13173908
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||| ||| || ||||  |||||||||||||||||  |||||||||    
T  13173969 cagttaaataggaacaaaaactttctcttaaagtgacacttaaaaaggaacatagggagtat 13173908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16701093 - 16701150
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggaggga 58  Q
    |||||||||||||||||||  ||| ||| |||  ||||||||||||||||||||||||    
T  16701093 cagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggaggga 16701150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18291504 - 18291443
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||| |||||||||||| | | ||   ||||||||||||||||||||||||||||    
T  18291504 cagttaaatagcaacaaaaaatttcttcaaaggagacacttaaaaaggaacggagggagtat 18291443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40604051 - 40604112
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||  |||||||   |  ||||||||||||||||||||||||||||    
T  40604051 cagttaaataggaacaaaatttttatccatcagtgacacttaaaaaggaacggagggagtat 40604112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2743034 - 2743094
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||| ||||||| | |||||||  |||||||||||  |||||||||||||    
T  2743034 cagttaaataggaacgaaaaattcaccctaaaaaaacacttaaaaaaaaacggagggagta 2743094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 16393692 - 16393632
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||| ||||||| |  |||||| |||||||||||| |||||||| |||||    
T  16393692 cagttaaataggaacgaaaaattcactctaaaaagacacttaaaaatgaacggagagagta 16393632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 23848756 - 23848816
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||  ||| ||| |||  |||||||||||||||||||||| ||||    
T  23848756 cagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggaggtagta 23848816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 36058272 - 36058212
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||| |||||||||||| | | |||  ||||||||||||||||||||| ||||||    
T  36058272 agttaaatagaaacaaaaaatttcttcaaaagagacacttaaaaaggaacggagtgagtat 36058212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 40521444 - 40521507
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataaa 65  Q
    |||||||||||||| ||||||||| ||| |||  |||| |||||||||||||| |||||||||||    
T  40521444 cagttaaataggaa-aaaaaatttctccaaaagtgacaattaaaaaggaacggggggagtataaa 40521507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 33935260 - 33935319
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagt 60  Q
    |||||||||||||||||||| ||| | | |||   |||||||||||||||||||||||||    
T  33935260 cagttaaataggaacaaaaattttcttcaaaagtaacacttaaaaaggaacggagggagt 33935319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 38128740 - 38128798
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggag 59  Q
    ||||||||||| |||||||  ||| ||| |||  |||||||||||||||||||||||||    
T  38128740 cagttaaatagaaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggag 38128798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 10180407 - 10180350
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||||||| | | |||  |||||||||||||||| ||||| ||||    
T  10180407 ttaaataggaacaaaaaatttcttcaaaagagacacttaaaaaggaatggaggaagta 10180350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 29315254 - 29315221
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||||| ||||||||||||||    
T  29315254 ctaaaacgacacttaaaaaagaacggagggagta 29315221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9954689 - 9954629
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||| |||  ||| ||| |||  |||||||||||||||||||||| ||||    
T  9954689 cagttaaataggaactaaatttttctccaaaagtgacacttaaaaaggaacggaggaagta 9954629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13327819 - 13327759
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||| |||||||  ||| ||| |||  |||||||||||||||||||| ||||||    
T  13327819 cagttaaatagaaacaaaatttttctccaaaagtgacacttaaaaaggaacggatggagta 13327759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25496621 - 25496561
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||  ||||||| |  |||||| |||||||||||| ||| ||||||||||    
T  25496621 cagttaaataggaatgaaaaattcacactaaaaagacacttaaaaatgaatggagggagta 25496561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 3e-19; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 21527445 - 21527505
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataa 64  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  21527445 ttaaataggaacgaaaaattcatcctaaaaagacacttaaaaaggaacggagggagtataa 21527505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 26252735 - 26252795
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||| |||||||||||||    
T  26252735 cagttaaataggaacaaaaaattcaccctagaacgacacttaaaaagtaacggagggagta 26252795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 23777335 - 23777276
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||||||||| ||| |||  |||||||||||||||||||||||||||    
T  23777335 agttaaataggaacaaaaaatttctccaaaattgacacttaaaaaggaacggagggagta 23777276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 1751633 - 1751695
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataa 64  Q
    ||||||||||||||||||||||| | | |||  ||||||||||||||||||||||||||||||    
T  1751633 agttaaataggaacaaaaaatttcttcaaaagtgacacttaaaaaggaacggagggagtataa 1751695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 17193195 - 17193137
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||    
T  17193195 ttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagtat 17193137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 25056458 - 25056401
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||| ||||||| | ||||||| |||||||||||||||||||||||||||    
T  25056458 ttaaataggaacgaaaaattcaccctaaaaagacacttaaaaaggaacggagggagta 25056401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9838323 - 9838383
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||| |||||||||||||| ||| |||  |||||||||||||||||||||||||||    
T  9838323 cagttaaattggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 9838383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 23923914 - 23923974
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||| | ||| |||  |||||||||||||||||||||||||||    
T  23923914 cagttaaataggaacaaaaaatctctccaaaagtgacacttaaaaaggaacggagggagta 23923974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24635748 - 24635688
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||| |||||||||||| ||| |||  |||||||||||||||||||||||||||    
T  24635748 cagttaaatagaaacaaaaaatttctccaaaagggacacttaaaaaggaacggagggagta 24635688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 3849105 - 3849042
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataa 64  Q
    |||||||||||||||||||  ||| ||| |||  ||||||||||||||||||||||||||||||    
T  3849105 cagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagtataa 3849042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 7833503 - 7833444
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||| |  |||||| |||||||||||| ||||||||||||||    
T  7833503 agttaaataggaacaaaaaattcactctaaaaagacacttaaaaaagaacggagggagta 7833444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17835933 - 17835872
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||  ||| ||| |||  ||||||||||||||||||||||||||||    
T  17835933 cagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagtat 17835872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19645873 - 19645934
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||| |||||||||||| ||| |||  ||||||||||||||||| ||||||||||    
T  19645873 cagttaaatagaaacaaaaaatttctccaaaagtgacacttaaaaaggaacagagggagtat 19645934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 26470927 - 26470984
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||||||| | | |||  |||||||||||||||||||||||||||    
T  26470927 ttaaataggaacaaaaaatttcttcaaaagagacacttaaaaaggaacggagggagta 26470984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8176476 - 8176416
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| | | |||  |||||||||||||||||| ||||||||    
T  8176476 cagttaaataggaacaaaaaatttcttcaaaagagacacttaaaaaggaacgaagggagta 8176416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22400765 - 22400825
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||| ||||||||||||| ||| |||  |||||||||||||||||||||| ||||    
T  22400765 cagttaaataagaacaaaaaatttctccaaaagagacacttaaaaaggaacggaggtagta 22400825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 8049148 - 8049090
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||| |||| ||||||| | ||||||| ||||||||||||||||| ||||||||||    
T  8049148 ttaaataagaacgaaaaattcaccctaaaaagacacttaaaaaggaacagagggagtat 8049090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 21526938 - 21526904
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||||||||||||||||||    
T  21526938 ctaaaacgacacttaaaaaggaacggagggagtat 21526904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 373763 - 373702
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||| ||||||||||||| ||| |||  |||||||||||| |||||||| ||||||    
T  373763 cagttaaatatgaacaaaaaatttctccaaaagtgacacttaaaaatgaacggagagagtat 373702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 27313537 - 27313480
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||||||| ||| |||  ||||||||||||  |||||||||||||    
T  27313537 ttaaataggaacaaaaaatttctccaaaagagacacttaaaaaaaaacggagggagta 27313480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24356255 - 24356315
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||| |||||| ||  |||  |||| ||||||||||||||||||||||    
T  24356255 cagttaaataggaacaataaatttctctaaaagtgacaattaaaaaggaacggagggagta 24356315  T

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Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 30388761 - 30388701
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||| |||||||||||| ||| | | |||  |||||||||||||||||||||||||||    
T  30388761 cagttaattaggaacaaaaattttcttcaaaagtgacacttaaaaaggaacggagggagta 30388701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 7972753 - 7972807
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||| ||||||| | |||||   |||||||||||||||||||||||||||    
T  7972753 ttaaataggaacgaaaaattcaccctaa---gacacttaaaaaggaacggagggagta 7972807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 364744 - 364806
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||||| |||||||| ||| ||| |||  ||||||||||||||||||||  |||||||    
T  364744 cagttaaatagtaacaaaaattttctccaaaagtgacacttaaaaaggaacggatcgagtata 364806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 9095887 - 9095949
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    |||||||||| |||| ||||||| | |||||||||||  |||||||||||| |||| ||||||    
T  9095887 cagttaaataagaacgaaaaattcaccctaaaacgacggttaaaaaggaacagaggaagtata 9095949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 24663419 - 24663357
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    |||||||||||||| ||||| ||| ||| |||  || ||||||||||||||||| ||||||||    
T  24663419 cagttaaataggaataaaaattttctccaaaagtgatacttaaaaaggaacggatggagtata 24663357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2437953 - 2438014
Alignment:
Q  1 cagttaaataggaacaaaaaattt-atcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||| |||||||||| || | |||| || ||||| |||||||||||||||||||||    
T  2437953 cagttaaataagaacaaaaaaattcaccctagaaagacacctaaaaaggaacggagggagta 2438014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 8992587 - 8992526
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||| ||||||||||||| | | |||  ||||||||||||||||| |||| ||||||    
T  8992587 agttaaatatgaacaaaaaatttcttcaaaagagacacttaaaaaggaacagaggaagtata 8992526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 9017034 - 9016973
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||| ||||||||||||| | | |||  ||||||||||||||||| |||| ||||||    
T  9017034 agttaaatatgaacaaaaaatttcttcaaaagagacacttaaaaaggaacagaggaagtata 9016973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22050089 - 22050028
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||| ||||||||| || ||| |||  |||  |||||||||||||||||||||||    
T  22050089 cagttaaatagaaacaaaaaaattctccaaaagagacgattaaaaaggaacggagggagtat 22050028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34378899 - 34378839
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||| ||||||   ||| ||| |||| |||||||||||||||||||| ||||||    
T  34378899 cagttaaatagaaacaaattttttttccaaaaatgacacttaaaaaggaacggatggagta 34378839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 5e-18; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 21934624 - 21934686
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||| ||||||| |||||||    
T  21934624 cagttaaataggaacaaaaaattcaccctaaaacgacacttaaaaagaaacggagagagtata 21934686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 25842053 - 25842111
Alignment:
Q  5 taaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||    
T  25842053 taaataggaacgaaaaattcaccctaaaacgacacttaaaaaggaacggagggagtata 25842111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21959797 - 21959858
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||||| ||||||||||||||    
T  21959797 cagttaaataggaacaaaatattcaccctaaaacgacacttaaaaagaaacggagggagtat 21959858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 53745487 - 53745548
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||    
T  53745487 cagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagtat 53745548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16237687 - 16237747
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||| |||||||  |||||||| |||||||||||||||||||||||||||    
T  16237687 cagttaaataggaacgaaaaattattcctaaaaagacacttaaaaaggaacggagggagta 16237747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 45760068 - 45760128
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||| ||||||||| | ||||| |||||||||||||||||||||||||||    
T  45760068 cagttaaataggaacgaaaaatttaccataaaaagacacttaaaaaggaacggagggagta 45760128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 7259806 - 7259865
Alignment:
Q  3 gttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||||||||||||| |  |||||| ||||||||||||||||||||||||||||    
T  7259806 gttaaataggaacaaaaaattcactctaaaaagacacttaaaaaggaacggagggagtat 7259865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 38751215 - 38751274
Alignment:
Q  5 taaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataa 64  Q
    |||||| |||||||||||| | |||||||||||||||||||||||||||||||| |||||    
T  38751215 taaataagaacaaaaaattcaccctaaaacgacacttaaaaaggaacggagggaatataa 38751274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17102794 - 17102733
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||||||| ||| |||  |||||||||||| |||||||||||||||    
T  17102794 cagttaaataggaacaaaaaatttctccaaaagagacacttaaaaaagaacggagggagtat 17102733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 41351401 - 41351461
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| ||| |||  |||||||||||| ||||||||||||||    
T  41351401 cagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaagaacggagggagta 41351461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 7328494 - 7328435
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||||||||| ||| |||  |||||||||||||||||||| ||||||    
T  7328494 agttaaataggaacaaaaaatttctccaaaagagacacttaaaaaggaacggaaggagta 7328435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 41425666 - 41425607
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    |||||||||||||||||| || ||| |||  |||||||||||||||||||||||||||||    
T  41425666 ttaaataggaacaaaaaaattctccaaaagagacacttaaaaaggaacggagggagtata 41425607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 7259318 - 7259282
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagtataa 64  Q
    |||||||||||||||||||||||||||||||||||||    
T  7259318 ctaaaacgacacttaaaaaggaacggagggagtataa 7259282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20841291 - 20841231
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||| |||| |||| || | ||||||| |||||||||||||||||||||||||||    
T  20841291 cagttaaataagaaccaaaatttcaccctaaaatgacacttaaaaaggaacggagggagta 20841231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 32980680 - 32980616
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataaa 65  Q
    ||||||||||| ||||||||| || ||| |||  |||||||||||| ||||||||||||||||||    
T  32980680 cagttaaatagaaacaaaaaaattctccaaaagagacacttaaaaaagaacggagggagtataaa 32980616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34668652 - 34668592
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||| |||| || | ||||||| |||||||||||||||||| ||||||||    
T  34668652 cagttaaataggaacgaaaatttcaccctaaaaagacacttaaaaaggaacgaagggagta 34668592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 40319137 - 40319201
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataaagta 68  Q
    |||||||||||||||||| || ||| |||  |||||||||||||||||||| |||||||| ||||    
T  40319137 ttaaataggaacaaaaaaattctccaaaagagacacttaaaaaggaacggatggagtatatagta 40319201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 43554430 - 43554370
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||| ||| ||| |||  |||||||||||||||||||| ||||||    
T  43554430 cagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggatggagta 43554370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 47104361 - 47104421
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| ||  |||  |||| ||||||||||||||||||||||    
T  47104361 cagttaaataggaacaaaaaatttctctaaaagtgacaattaaaaaggaacggagggagta 47104421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27039812 - 27039867
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagg 56  Q
    |||||||||||||||||||| ||| |||||||  ||||||||||||||||| ||||    
T  27039812 cagttaaataggaacaaaaattttctcctaaagtgacacttaaaaaggaacagagg 27039867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 47070065 - 47070124
Alignment:
Q  3 gttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||||| | | |||  |||||||||||||||| |||||||||||    
T  47070065 gttaaataggaacaaaaaatttctacgaaagtgacacttaaaaaggaatggagggagtat 47070124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 790590 - 790529
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||| |||| ||| ||| ||| |||  ||||||||||||||||||||||||||||    
T  790590 cagttaaatagaaacataaattttctccaaaagtgacacttaaaaaggaacggagggagtat 790529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2093746 - 2093701
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaa 46  Q
    ||||||||||||||||||||||||| ||||||| |||| |||||||    
T  2093746 cagttaaataggaacaaaaaatttaccctaaaaagacatttaaaaa 2093701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22174046 - 22174099
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacgga 54  Q
    ||||||||||  |||||||||||||||| |||| |||||||||||| |||||||    
T  22174046 cagttaaataaaaacaaaaaatttatccaaaaaagacacttaaaaatgaacgga 22174099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 33491345 - 33491398
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacgga 54  Q
    |||||||||||||||||||||||| | | |||  ||||||||||||||||||||    
T  33491345 cagttaaataggaacaaaaaatttcttcaaaagagacacttaaaaaggaacgga 33491398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42672096 - 42672157
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||| |||||||||||||| ||| ||| |||| ||| |||||||||||| |||||||||||    
T  42672096 cagttgaataggaacaaaaattttctccaaaaatgacgcttaaaaaggaatggagggagtat 42672157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 45646570 - 45646513
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggaggga 58  Q
    ||||||||||||||| |||| || |  |||||| ||||||||||||||||||||||||    
T  45646570 cagttaaataggaacgaaaatttcactctaaaaagacacttaaaaaggaacggaggga 45646513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 15646433 - 15646465
Alignment:
Q  31 aaacgacacttaaaaaggaacggagggagtata 63  Q
    |||||||||||||||||||||||||||||||||    
T  15646433 aaacgacacttaaaaaggaacggagggagtata 15646465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19550286 - 19550226
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| ||| |||   ||| ||||||||||||||| ||||||    
T  19550286 cagttaaataggaacaaaaaatttctccaaaagtaacatttaaaaaggaacggatggagta 19550226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20105232 - 20105172
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||| ||||||||||| ||| ||| |||  |||||||||||||||||||||| ||||    
T  20105232 cagttaaagaggaacaaaaattttctccaaaagtgacacttaaaaaggaacggaggtagta 20105172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 40140035 - 40140099
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataaa 65  Q
    ||||||||||| ||||||||| || ||| |||  |||||||||||||||  ||||||||||||||    
T  40140035 cagttaaatagaaacaaaaaaattctccaaaagagacacttaaaaaggataggagggagtataaa 40140099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 45513821 - 45513881
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| ||| |||   ||||||||||| ||||||||| ||||    
T  45513821 cagttaaataggaacaaaaaatttctccaaaagtaacacttaaaaaagaacggaggaagta 45513881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 51064923 - 51064863
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||  |||||||||||| || ||| |||| |||| ||||||||||||||||||||||    
T  51064923 cagttaatcaggaacaaaaaaattctccaaaaatgacaattaaaaaggaacggagggagta 51064863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 52627447 - 52627507
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataa 64  Q
    |||||||| ||||||||| || ||| |||  |||||||||||||||||||| |||||||||    
T  52627447 ttaaatagaaacaaaaaacttctccaaaagtgacacttaaaaaggaacggaaggagtataa 52627507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 54334389 - 54334448
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||| |||||||||||| ||| |||| ||||||||||||||||  |||||||||    
T  54334389 cagttaaatagaaacaaaaaatttctcc-aaaatgacacttaaaaaggaattgagggagta 54334448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 19234108 - 19234167
Alignment:
Q  3 gttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||| ||| ||||||  |  |||||||||||||||||||||| ||||||||||||    
T  19234108 gttaaatagaaacgaaaaatccacactaaaacgacacttaaaaaggatcggagggagtat 19234167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 39867055 - 39867117
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataa 64  Q
    |||||||||||||| ||||||||  ||| |||  |||||||||||||||||||| |||||||||    
T  39867055 cagttaaataggaaaaaaaaattc-tccaaaagagacacttaaaaaggaacggatggagtataa 39867117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 50091985 - 50091930
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagg 56  Q
    ||||||| |||||||||||| ||| ||| ||||  |||||||||||||||||||||    
T  50091985 cagttaagtaggaacaaaaagtttctccaaaaataacacttaaaaaggaacggagg 50091930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 54898293 - 54898352
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||||  ||| ||| |||  ||||||||||||||||| |||||||||    
T  54898293 agttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacagagggagta 54898352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 5244142 - 5244196
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagg 56  Q
    ||||||||||||||||||| ||||||| |||  ||||| ||||||||||| ||||    
T  5244142 agttaaataggaacaaaaattttatccgaaagtgacacgtaaaaaggaacagagg 5244196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 21933923 - 21933889
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||||||||||| |||||||||||||||    
T  21933923 ctaaaacgacacttaaaaaagaacggagggagtat 21933889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 28885716 - 28885658
Alignment:
Q  3 gttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||| | | |||  |||||||||||| ||||||| ||||||    
T  28885716 gttaaataggaacaaaaaatttcttcaaaagagacacttaaaaatgaacggaaggagta 28885658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 36371037 - 36371098
Alignment:
Q  4 ttaaataggaacaaaaaat--ttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||||||||||||   || ||| |||  |||||||||||||||||||||||||||||    
T  36371037 ttaaataggaacaaaaaaaaattctccaaaagagacacttaaaaaggaacggagggagtata 36371098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 52663479 - 52663421
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||| |||||||||||| ||| |||  |||||||||||| |||||||| ||||||    
T  52663479 ttaaatagtaacaaaaaatttctccaaaactgacacttaaaaatgaacggagagagtat 52663421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 61
Target Start/End: Original strand, 54675326 - 54675356
Alignment:
Q  31 aaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||||||||||    
T  54675326 aaacgacacttaaaaaggaacggagggagta 54675356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 2599660 - 2599693
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||| |||||||||||||||||||||||||||    
T  2599660 ctaaaaagacacttaaaaaggaacggagggagta 2599693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13168056 - 13167995
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||| |||||| || ||| ||  |||  ||||||||||||||||||||||||||||    
T  13168056 cagttaaataagaacaataattttctctaaaagtgacacttaaaaaggaacggagggagtat 13167995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 16237009 - 16236976
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||| |||||||||||||||||||||||||||    
T  16237009 ctaaaaagacacttaaaaaggaacggagggagta 16236976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32854154 - 32854214
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||||||| ||| |||  || || |||||||||| |||||||||||    
T  32854154 cagttaaataggaacaaaaaatttctccaaaagtga-acctaaaaaggaatggagggagtat 32854214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 57
Target Start/End: Complemental strand, 38750474 - 38750445
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggaggg 57  Q
    ||||||||||||||||||||||||||||||    
T  38750474 ctaaaacgacacttaaaaaggaacggaggg 38750445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 11473441 - 11473389
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacgga 54  Q
    ||||||| ||||||||||||||| ||| |||  |||| |||||||||||||||    
T  11473441 agttaaacaggaacaaaaaatttctccaaaagtgacatttaaaaaggaacgga 11473389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 33874752 - 33874812
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| ||  |||  ||||  ||||||||||||| |||||||    
T  33874752 cagttaaataggaacaaaaaatttctctaaaagtgacagataaaaaggaacggtgggagta 33874812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 54106303 - 54106243
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||  ||| | | |||  |||||||||||||||| ||||||||||    
T  54106303 cagttaaataggaacaaaatttttcttcaaaagtgacacttaaaaaggaatggagggagta 54106243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 5e-18; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 1677255 - 1677193
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataa 64  Q
    ||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||    
T  1677255 agttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagtataa 1677193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 52414885 - 52414824
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||||||||||||||| | ||| ||| ||||||||||||||||||||||||||||    
T  52414885 cagttaaataggaacaaaaaattcacccttaaaagacacttaaaaaggaacggagggagtat 52414824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9362013 - 9361953
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| | | |||| |||||||||||||||||||||||||||    
T  9362013 cagttaaataggaacaaaaaatttcttcaaaaatgacacttaaaaaggaacggagggagta 9361953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 4671371 - 4671312
Alignment:
Q  3 gttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||||||||||||| | |||||||||||||||||||| |||||||| ||||||    
T  4671371 gttaaataggaacaaaaaattcaccctaaaacgacacttaaaaatgaacggagagagtat 4671312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 15660627 - 15660565
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||||||||||||| |||| ||| |||| ||||||||||||||||||||| |||||||    
T  15660627 cagttaaataggaacaaaatatttctccaaaaatgacacttaaaaaggaacggagagagtata 15660565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8464646 - 8464707
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||||||| ||| |||  |||||||||||| |||||||||||||||    
T  8464646 cagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaacgaacggagggagtat 8464707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 31570834 - 31570895
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||| ||||||||||||| ||| |||  ||||||||||||||||||||||||||||    
T  31570834 cagttaaatatgaacaaaaaatttctccaaaagagacacttaaaaaggaacggagggagtat 31570895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 35531492 - 35531556
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataaa 65  Q
    |||||||||||||||||||  ||| ||| |||  |||||||||||||||||||||||||||||||    
T  35531492 cagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagtataaa 35531556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 45226774 - 45226829
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagg 56  Q
    |||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||    
T  45226774 cagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagg 45226829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 19929665 - 19929723
Alignment:
Q  3 gttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||| ||| |||  ||||||||||||| |||||||||||||    
T  19929665 gttaaataggaacaaaaaatttctccaaaagagacacttaaaaagaaacggagggagta 19929723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 31588936 - 31588998
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||||| |||||||| ||| ||  |||| |||||||||||||||||||||||||||||    
T  31588936 cagttaaatagaaacaaaaattttctctaaaaatgacacttaaaaaggaacggagggagtata 31588998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 36318393 - 36318331
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||||| |||||||||||||||  |||  |||||||||||||||||||||| ||||||    
T  36318393 cagttaaatagaaacaaaaaatttatctaaaagtgacacttaaaaaggaacggaggaagtata 36318331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1674885 - 1674945
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||| |||||| ||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  1674885 cagttaaa-aggaacgaaaaattcatcctaaaaagacacttaaaaagaaacggagggagtat 1674945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 6295864 - 6295925
Alignment:
Q  1 cagttaaataggaac-aaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||| |||| |||||||| | ||||||| |||||||||||||||||||||||||||    
T  6295864 cagttaaataagaacgaaaaaattcaccctaaaaagacacttaaaaaggaacggagggagta 6295925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13507810 - 13507749
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||||||| ||| |||  |||||||||||||||||  |||||||||    
T  13507810 cagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacttagggagtat 13507749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13514998 - 13514937
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||||||| ||| |||  |||||||||||||||||  |||||||||    
T  13514998 cagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacttagggagtat 13514937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 30279982 - 30279925
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggaggga 58  Q
    |||||||||||||||||||| || | |||||||| |||||||||||| ||||||||||    
T  30279982 cagttaaataggaacaaaaagttcaccctaaaacaacacttaaaaagaaacggaggga 30279925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10675942 - 10675882
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| | | |||  |||||||||||| ||||||||||||||    
T  10675942 cagttaaataggaacaaaaaatttcttcaaaagagacacttaaaaaagaacggagggagta 10675882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11238362 - 11238422
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||| ||||||| | ||||||| |||||||||||| |||||||| |||||    
T  11238362 cagttaaataggaacgaaaaattcaccctaaaaagacacttaaaaaagaacggagagagta 11238422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13699214 - 13699154
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||| || ||||||||||| | ||| ||||||||||||||||||||| ||||||    
T  13699214 cagttaaatagaaataaaaaatttattcaaaagcgacacttaaaaaggaacggatggagta 13699154  T

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Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21927893 - 21927953
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||| ||||||||||||| | | |||  |||||||||||||||||||||||||||    
T  21927893 cagttaaataagaacaaaaaatttctgcaaaagtgacacttaaaaaggaacggagggagta 21927953  T

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Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 30686451 - 30686391
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| ||| |||  |||||||||||||||||  ||||||||    
T  30686451 cagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacatagggagta 30686391  T

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Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32768940 - 32768881
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||| ||||||||||| | |||||||||| ||||||||||||||||||| ||||    
T  32768940 cagttaaatag-aacaaaaaattcaccctaaaacgatacttaaaaaggaacggaggaagta 32768881  T

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Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 37296922 - 37296982
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||| ||||||||||||| ||| |||  |||||||||||| ||||||||||||||    
T  37296922 cagttaaatatgaacaaaaaatttctccaaaagagacacttaaaaacgaacggagggagta 37296982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 37437250 - 37437310
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||||||||||   |||||||||||| ||| |||| |||||    
T  37437250 cagttaaataggaacaaaaaatttatcctaacgtgacacttaaaaaagaagggagagagta 37437310  T

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Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 43952828 - 43952773
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagg 56  Q
    |||||||||| ||||||||||||| ||| |||| ||||||||||||| ||||||||    
T  43952828 cagttaaataagaacaaaaaatttctccaaaaatgacacttaaaaagaaacggagg 43952773  T

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Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 40519328 - 40519385
Alignment:
Q  3 gttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||| ||||||||||  | ||||||||| |||||||||||||||||||||||||    
T  40519328 gttaaatag-aacaaaaaatgcaccctaaaacggcacttaaaaaggaacggagggagta 40519385  T

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Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 52749057 - 52748995
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    |||| ||||||||||||||||||| | | |||| |||| |||||||| |||||||||||||||    
T  52749057 cagtcaaataggaacaaaaaatttcttcaaaaatgacatttaaaaagaaacggagggagtata 52748995  T

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Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1429324 - 1429263
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||| ||| ||| |||  |||||||| ||| |||||||||||||||    
T  1429324 cagttaaataggaacaaaaattttctccaaaagtgacacttagaaaagaacggagggagtat 1429263  T

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Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 18034023 - 18034084
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||| ||||||||| ||  |||  |||||||||||||||||||| |||||||    
T  18034023 cagttaaataggaataaaaaatttctcaaaaagtgacacttaaaaaggaacggatggagtat 18034084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 35483976 - 35484029
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacgga 54  Q
    |||||||||||||||||||| ||| ||| |||| |||||||||||| |||||||    
T  35483976 cagttaaataggaacaaaaattttctccaaaaatgacacttaaaaatgaacgga 35484029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 37609498 - 37609559
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||| ||||||||| ||| ||| |||  ||||||||||||||||||||| ||||||    
T  37609498 cagttaaataagaacaaaaattttctccaaaagtgacacttaaaaaggaacggagagagtat 37609559  T

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Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40680638 - 40680699
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||| |||||||||||| ||| ||||  ||||| |||||||||| ||||||||||    
T  40680638 cagttaaatagaaacaaaaaatttctcccaaaaaaacactaaaaaaggaactgagggagtat 40680699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 48508170 - 48508109
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataaa 65  Q
    ||||||||||||| |||| || | | |||  |||||||||||||||||||||||||||||||    
T  48508170 ttaaataggaacataaaaattcttcaaaatagacacttaaaaaggaacggagggagtataaa 48508109  T

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Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 50825769 - 50825830
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||| || ||||||||||||| | | |||  ||||||||||||||||||||||||||||    
T  50825769 cagttaagtaagaacaaaaaatttcttcaaaagagacacttaaaaaggaacggagggagtat 50825830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 32168509 - 32168573
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataaa 65  Q
    ||||||||||| |||||||| ||| ||  |||  |||| ||||||||||||||||||||||||||    
T  32168509 cagttaaatagaaacaaaaattttctctaaaagtgacaattaaaaaggaacggagggagtataaa 32168573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 40926940 - 40927000
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||| ||||||||| || ||| |||  ||||||||||||||||| |||||||||    
T  40926940 cagttaaatagaaacaaaaaaattctccaaaagagacacttaaaaaggaacagagggagta 40927000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 59
Target Start/End: Original strand, 52415754 - 52415785
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggag 59  Q
    ||||||||||||||||||||||||||||||||    
T  52415754 ctaaaacgacacttaaaaaggaacggagggag 52415785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 13254884 - 13254938
Alignment:
Q  7 aataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||| |||| ||||||||| ||||||| ||||||| |||| ||||||||||||||    
T  13254884 aatatgaacgaaaaatttaccctaaaaagacactttaaaaagaacggagggagta 13254938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 35255523 - 35255473
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacgga 54  Q
    ||||||||||||||||||||| | | |||  ||||||||||||||||||||    
T  35255523 ttaaataggaacaaaaaatttcttcaaaagagacacttaaaaaggaacgga 35255473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 51613451 - 51613389
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    |||||||||||||||||||| ||| ||  |||  |||| ||||||||||| ||||||||||||    
T  51613451 cagttaaataggaacaaaaattttctctaaaagtgacaattaaaaaggaatggagggagtata 51613389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 1674271 - 1674238
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||||| ||||||||||||||    
T  1674271 ctaaaacgacacttaaaaaagaacggagggagta 1674238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 4672020 - 4672053
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||||| ||||||||||||||    
T  4672020 ctaaaacgacacttaaaaaagaacggagggagta 4672053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5597863 - 5597802
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||| ||||||||| || ||| |||  |||||||||||||||| | |||||||||    
T  5597863 cagttaaatagaaacaaaaaaattctccaaaagagacacttaaaaaggaatgaagggagtat 5597802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7782991 - 7782942
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaa 50  Q
    |||||||||||||||||||| ||| ||| |||  ||||||||||||||||    
T  7782991 cagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaa 7782942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 11237613 - 11237580
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||| |||||||||||||    
T  11237613 ctaaaacgacacttaaaaagtaacggagggagta 11237580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 19093304 - 19093251
Alignment:
Q  5 taaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggaggga 58  Q
    |||||||||||||||  ||| ||| |||  ||||||||||||||||||||||||    
T  19093304 taaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggaggga 19093251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 23699573 - 23699626
Alignment:
Q  3 gttaaataggaac-aaaaaatttatcctaaaacgacacttaaaaaggaacggag 55  Q
    ||||||||||||| |||||||| | ||| |||||| ||||||||||||||||||    
T  23699573 gttaaataggaacgaaaaaattcacccttaaacgaaacttaaaaaggaacggag 23699626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 32769596 - 32769629
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||||||||| ||||||||||    
T  32769596 ctaaaacgacacttaaaaaggaatggagggagta 32769629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 38597631 - 38597570
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacac-ttaaaaaggaacggagggagta 61  Q
    ||||||||||||||| |||| ||| ||| |||| ||||| |||||||||||| |||||||||    
T  38597631 cagttaaataggaacgaaaagtttctccaaaaatgacactttaaaaaggaacagagggagta 38597570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 62
Target Start/End: Complemental strand, 13566687 - 13566655
Alignment:
Q  30 aaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||| ||||||||||||||||||||||||||||    
T  13566687 aaaatgacacttaaaaaggaacggagggagtat 13566655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 28679061 - 28679001
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||| | ||||||||  ||| ||| |||  |||||||||||||||||||||||||||    
T  28679061 cagttaaacaagaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagta 28679001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 39386663 - 39386615
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacg 52  Q
    |||||||||||  ||||| | ||||||||| ||||||||||||||||||    
T  39386663 ttaaataggaaagaaaaactcatcctaaaaagacacttaaaaaggaacg 39386615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 63
Target Start/End: Complemental strand, 43021074 - 43021042
Alignment:
Q  31 aaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||||||||||| |||||||||||||||    
T  43021074 aaacgacacttaaaaagaaacggagggagtata 43021042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 44182800 - 44182740
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||| ||||||   ||| ||| |||  |||||||||||||||||||||||||||    
T  44182800 cagttaaatagaaacaaattttttctccaaaattgacacttaaaaaggaacggagggagta 44182740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 8e-17; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1397426 - 1397366
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||||||| ||||||||||    
T  1397426 cagttaaataggaacgaaaaattcatcctaaaaagacacttaaaaaggaatggagggagta 1397366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31025143 - 31025203
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||| |||||||||||| ||| |||| |||||||||||||||||||||||||||    
T  31025143 cagttaaatagaaacaaaaaatttctcccaaaatgacacttaaaaaggaacggagggagta 31025203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 150395 - 150457
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||||||||| ||||||| | ||||||| |||||||||||||||||||| ||||||||    
T  150395 cagttaaataggaacgaaaaattcaccctaaaaagacacttaaaaaggaacggatggagtata 150457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 4959500 - 4959558
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagt 60  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||||| ||||||||||||    
T  4959500 agttaaataggaacgaaaaatttaccctaaaaagacacttaaaaagaaacggagggagt 4959558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2012901 - 2012848
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacgga 54  Q
    |||||||||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  2012901 cagttaaataggaacaaaaaatttctccaaaaatgacacttaaaaaggaacgga 2012848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26342620 - 26342559
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||||||| |||||||| ||| |||  ||||||||||||||||||||||||||||    
T  26342620 cagttaaataggaaccaaaaatttctccaaaagtgacacttaaaaaggaacggagggagtat 26342559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 34399240 - 34399179
Alignment:
Q  3 gttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataa 64  Q
    |||||||||||| ||||||||| ||| |||  ||||||||||||||||||||||||||||||    
T  34399240 gttaaataggaataaaaaatttctccaaaagtgacacttaaaaaggaacggagggagtataa 34399179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41885665 - 41885604
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||||||| ||| |||  ||||| ||||||||||||||||||||||    
T  41885665 cagttaaataggaacaaaaaatttctccaaaagtgacacctaaaaaggaacggagggagtat 41885604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11074073 - 11074133
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||| ||||||| | ||||||| ||||||||| |||||||||||||||||    
T  11074073 cagttaaataggaacgaaaaattcaccctaaaaagacacttaagaaggaacggagggagta 11074133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 14295960 - 14296020
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||| ||| ||| |||  |||||||||||||||||||||||||||    
T  14295960 cagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggagggagta 14296020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 27746439 - 27746379
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||| ||||||| | ||||||| |||||||||||||||||||| ||||||    
T  27746439 cagttaaataggaacgaaaaattcaccctaaaaagacacttaaaaaggaacggaaggagta 27746379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37093490 - 37093435
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagg 56  Q
    |||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||    
T  37093490 cagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagg 37093435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 32674249 - 32674191
Alignment:
Q  3 gttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||| |||||||||||||| ||| |||  |||||||||||||||||||||||||||    
T  32674249 gttaaattggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 32674191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 35158554 - 35158616
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    |||||||||||||||||||||||| | | |||  ||||||||||||||||| |||||||||||    
T  35158554 cagttaaataggaacaaaaaatttcttcaaaagtgacacttaaaaaggaacagagggagtata 35158616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10812239 - 10812178
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||  ||| ||| |||  ||||||||||||||||||||||||||||    
T  10812239 cagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagtat 10812178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 28145775 - 28145840
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataaag 66  Q
    |||||||||||||| ||||| ||| ||| |||  |||||||||||||||||||||| |||||||||    
T  28145775 cagttaaataggaagaaaaattttctccaaaagtgacacttaaaaaggaacggaggaagtataaag 28145840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11222519 - 11222579
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||| |||||||||||| | | |||  |||||||||||||||||||||||||||    
T  11222519 cagttaaatagaaacaaaaaatttcttcaaaagagacacttaaaaaggaacggagggagta 11222579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14288471 - 14288411
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||| ||| ||| |||  ||||||||||||| |||||||||||||    
T  14288471 cagttaaataggaacaaaaattttctccaaaagtgacacttaaaaagaaacggagggagta 14288411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19594391 - 19594331
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| ||  |||  |||| ||||||||||||||||||||||    
T  19594391 cagttaaataggaacaaaaaatttctcaaaaagtgacaattaaaaaggaacggagggagta 19594331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 5783566 - 5783613
Alignment:
Q  3 gttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaa 50  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  5783566 gttaaataggaacgaaaaattcatcctaaaaagacacttaaaaaggaa 5783613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 15677494 - 15677557
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataa 64  Q
    |||||||||||||||||||  ||| ||| |||| ||||||||||||  ||||||||||||||||    
T  15677494 cagttaaataggaacaaaatttttctccaaaaatgacacttaaaaaataacggagggagtataa 15677557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 25965992 - 25966051
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||  ||||||| | ||||||| |||| ||||||||||||||||||||||    
T  25965992 agttaaataggaatgaaaaattcaccctaaaaagacatttaaaaaggaacggagggagta 25966051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9370014 - 9369948
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataaagt 67  Q
    ||||||||||| |||||||||||| ||| |||| |||| |||||||| ||| ||||||||| |||||    
T  9370014 cagttaaatagaaacaaaaaatttctccaaaaatgacaattaaaaagaaactgagggagtaaaaagt 9369948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15507423 - 15507363
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||| || |||||||  |  |||||||||||||| |||||||||||||||||||    
T  15507423 cagttaaatagaaataaaaaatacacactaaaacgacacttgaaaaggaacggagggagta 15507363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38589419 - 38589479
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||| ||||||| | | |||||  ||||||||||||||||||| ||||||    
T  38589419 cagttaaataggaacgaaaaattcaccataaaaaaacacttaaaaaggaacggatggagta 38589479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 20170931 - 20170896
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||||||||||| ||||||||||||||||||    
T  20170931 ctaaaacgacacttaaagaggaacggagggagtata 20170896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 15183207 - 15183265
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||| |||||||||||| ||  |||  |||||||||||||||||| |||||||||    
T  15183207 ttaaatagaaacaaaaaatttctcaaaaagtgacacttaaaaaggaacgaagggagtat 15183265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25558386 - 25558444
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggag 59  Q
    ||||||||||| |||||||| ||| ||| |||  ||||||||||||| |||||||||||    
T  25558386 cagttaaatagaaacaaaaattttctccaaaagtgacacttaaaaagaaacggagggag 25558444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1395605 - 1395544
Alignment:
Q  1 cagttaaataggaac-aaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||| ||||||||| | | ||   |||||||||||||||||||||||||||    
T  1395605 cagttaaataggaacgaaaaaatttctacaaatgtgacacttaaaaaggaacggagggagta 1395544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13753995 - 13753934
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||| ||||||||||  || ||| |||  |||||||||||||||||| |||||||||    
T  13753995 cagttaaattggaacaaaaatgttctccaaaagagacacttaaaaaggaacgaagggagtat 13753934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16806668 - 16806729
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||| |||| ||||||| | |||||||  ||||||||||||||||| || ||||||    
T  16806668 cagttaaataagaacgaaaaattcaccctaaaaatacacttaaaaaggaacgaagagagtat 16806729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16845949 - 16846010
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||| |||| ||||||| | |||||||  ||||||||||||||||| || ||||||    
T  16845949 cagttaaataagaacgaaaaattcaccctaaaaatacacttaaaaaggaacgaagagagtat 16846010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 34357215 - 34357158
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||   ||| ||| |||  |||||||||||||||||||||||||||    
T  34357215 ttaaataggaacaaattttttctccaaaagtgacacttaaaaaggaacggagggagta 34357158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 38072429 - 38072482
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacgga 54  Q
    ||||||||||| |||||||||||| ||| |||  ||||||| ||||||||||||    
T  38072429 cagttaaatagaaacaaaaaatttctccaaaagtgacacttgaaaaggaacgga 38072482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 42758142 - 42758175
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||| ||||||||||||||||||||    
T  42758142 ctaaaacgacactgaaaaaggaacggagggagta 42758175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4654759 - 4654699
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||| ||| |||||||| | | |||| ||||| ||| |||||||||||||||||    
T  4654759 cagttaaatagaaacgaaaaatttcttcaaaaaagacacgtaagaaggaacggagggagta 4654699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11560250 - 11560310
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||| |||||||| ||| ||| |||  ||||||||| ||| |||||||||||||    
T  11560250 cagttaaatagaaacaaaaattttctccaaaactgacacttaagaagaaacggagggagta 11560310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13965647 - 13965587
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||| ||||||||||||| ||| |||  |||| |||||||| || ||||||||||    
T  13965647 cagttaaatatgaacaaaaaatttctccaaaagagacatttaaaaagtaatggagggagta 13965587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 27747086 - 27747122
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagtataa 64  Q
    |||||||||||||||||||||||||||  ||||||||    
T  27747086 ctaaaacgacacttaaaaaggaacggaatgagtataa 27747122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 32854983 - 32855043
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| ||  |||  |||| ||| ||| ||||||||||||||    
T  32854983 cagttaaataggaacaaaaaatttctctaaaagtgacaattataaatgaacggagggagta 32855043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 33660728 - 33660760
Alignment:
Q  28 ctaaaacgacacttaaaaaggaacggagggagt 60  Q
    ||||||||||||||||||||||||||| |||||    
T  33660728 ctaaaacgacacttaaaaaggaacggatggagt 33660760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 61
Target Start/End: Complemental strand, 34424394 - 34424362
Alignment:
Q  29 taaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||||| ||||||    
T  34424394 taaaacgacacttaaaaaggaacggatggagta 34424362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 36375611 - 36375559
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacgg 53  Q
    |||| ||||||||||||||  ||| ||| |||| |||||||||||||||||||    
T  36375611 cagtcaaataggaacaaaatttttctccaaaaatgacacttaaaaaggaacgg 36375559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 43077332 - 43077272
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||||||||||||||||| | | |||  |||| |||||||||||  |||||||||    
T  43077332 cagttaaataggaacaaaaaatttcttcaaaagtgacaattaaaaaggaatagagggagta 43077272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 184328 - 184390
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    |||||||||||||| ||||||||| ||| |||  |||||||||||||||||||||||||||||    
T  184328 cagttaaataggaataaaaaatttctccaaaagtgacacttaaaaaggaacggagggagtata 184390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 195939 - 195999
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    |||||||||| ||||||||| ||| ||| |||| |||||||||||||||||||||||||||    
T  195939 cagttaaataagaacaaaaattttctccaaaaatgacacttaaaaaggaacggagggagta 195999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 202294 - 202234
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||| ||||||||| ||||||| | ||||||| |||||||||||||||||||||||||||    
T  202294 cagttgaataggaacgaaaaattcaccctaaaaagacacttaaaaaggaacggagggagta 202234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 14922 - 14983
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||| |||||||||| ||| ||| |||  ||||||||||||||||||||||||||||    
T  14922 cagttaaattggaacaaaaagtttctccgaaagtgacacttaaaaaggaacggagggagtat 14983  T

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Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 49187 - 49126
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||||||||||||||||| ||| |||  ||||||||||||||||| || |||||||    
T  49187 cagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaactgatggagtat 49126  T

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Target: scaffold0159 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 37029 - 37076
Alignment:
Q  3 gttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaa 50  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  37029 gttaaataggaacgaaaaattcatcctaaaaagacacttaaaaaggaa 37076  T

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Target: scaffold1130 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 62
Target Start/End: Original strand, 834 - 867
Alignment:
Q  29 taaaacgacacttaaaaaggaacggagggagtat 62  Q
    ||||||||||||||||||||||||||||||||||    
T  834 taaaacgacacttaaaaaggaacggagggagtat 867  T

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Target: scaffold1130; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 357 - 297
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||| ||| |||| || | ||||||| |||||||||||||||||||||| ||||    
T  357 cagttaaatagaaacgaaaatttcaccctaaaaagacacttaaaaaggaacggaggaagta 297  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 419840 - 419898
Alignment:
Q  6 aaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataaa 65  Q
    |||| |||||||||||||| ||| |||  |||||||||||||||||||| ||||||||||    
T  419840 aaattggaacaaaaaatttctccaaaagtgacacttaaaaaggaacgga-ggagtataaa 419898  T

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Target: scaffold1327 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1327
Description:

Target: scaffold1327; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 842 - 781
Alignment:
Q  2 agttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtataa 64  Q
    |||||||||||||| ||||||  | ||||||| |||||||||||| ||| |||||||||||||    
T  842 agttaaataggaacgaaaaatc-accctaaaaagacacttaaaaaagaatggagggagtataa 781  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 147329 - 147387
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggag 59  Q
    |||||||||| ||||||||||||| ||  |||  |||| ||||||||||||||||||||    
T  147329 cagttaaatatgaacaaaaaatttctctaaaagtgacaattaaaaaggaacggagggag 147387  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 272492 - 272554
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtata 63  Q
    ||||||||||||||| ||||||| ||  |||||  ||||||||||||||| |||||| |||||    
T  272492 cagttaaataggaacgaaaaattcattttaaaaatacacttaaaaaggaatggagggggtata 272554  T

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Target: scaffold0040 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 69137 - 69080
Alignment:
Q  4 ttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||||||||||||| ||| | | |||  ||||||||||||| |||||||||||||    
T  69137 ttaaataggaacaaaaattttcttcaaaagtgacacttaaaaagaaacggagggagta 69080  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 138932 - 138993
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagtat 62  Q
    |||||||||| |||||| || ||| ||  |||  ||||||||||||||||||||||||||||    
T  138932 cagttaaataagaacaataattttctctaaaagtgacacttaaaaaggaacggagggagtat 138993  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 252634 - 252574
Alignment:
Q  1 cagttaaataggaacaaaaaatttatcctaaaacgacacttaaaaaggaacggagggagta 61  Q
    ||||||| ||| ||||||||| |||| | |||  |||| ||||||||||||||||||||||    
T  252634 cagttaattagaaacaaaaaaattatgcaaaagtgacaattaaaaaggaacggagggagta 252574  T

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