View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6213_high_30 (Length: 202)
Name: NF6213_high_30
Description: NF6213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6213_high_30 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 44905786 - 44905987
Alignment:
| Q |
1 |
tttgcatctaggtcccctatgctgctttaacttggtggtagtcactactccagatgtttgagagcagtgacaaagttaatgactacacaaattaacaaca |
100 |
Q |
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| T |
44905786 |
tttgcatctaggtcccctatgctgctttaacttggtggtagtcactactccagatgtttgagagcagtgacaaagttaatgactacacaaattaacaaca |
44905885 |
T |
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| Q |
101 |
aaaatgatagataattgcatattatcatgtctaatggaatggtgacccgagccaaccaacttagataaatgagttaatactttgaatcacccatctacaa |
200 |
Q |
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| T |
44905886 |
aaaatgatagataattgcatattatcatgtctaatggaatggtgacccgagccaaccaacttagataaatgagttaatactttgaatcacccatctacaa |
44905985 |
T |
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| Q |
201 |
gt |
202 |
Q |
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| T |
44905986 |
gt |
44905987 |
T |
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