View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6214_high_5 (Length: 242)
Name: NF6214_high_5
Description: NF6214
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6214_high_5 |
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Alignment Details
Target: chr1 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 32591432 - 32591603
Alignment:
| Q |
59 |
aaagttgagggtaattttggaagnnnnnnnccaatagataacatacta-----taatacaagttacatatatctagttannnnnnncccttnnnnnnnnt |
153 |
Q |
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| T |
32591432 |
aaagttgaaggtaatttcggaagaaaaaaaccaatagataacatactacagtataatacaagttacatatatttagttatttttttcccttaaaaaaaat |
32591531 |
T |
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| Q |
154 |
tatattttttggaagggtagttacgaataacggttttttctcaacaaaaaacaagaaaagcaaataacaact |
225 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32591532 |
tatattttttggaagggtagttacgaataacggttttttctcaacaaaaaacaagaaaagcaaataacaact |
32591603 |
T |
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