View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6216_low_14 (Length: 296)
Name: NF6216_low_14
Description: NF6216
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6216_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 279
Target Start/End: Complemental strand, 41277145 - 41276867
Alignment:
| Q |
1 |
tattacattaaattttaaaaatatacagttacatcattattggttcagctgcagttaagcaattaaaaaacttcatgggttaaaagttaaacgatcggtt |
100 |
Q |
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| T |
41277145 |
tattacattaaattttaaaaatatacagttacatcattattggttcagctgcagttaagcaattaaaaaacttcatgggttaaaagttaaacgatcggtt |
41277046 |
T |
|
| Q |
101 |
ctattaatgaagattgtgattctgaacttgacgtagtaacgtgtataatcataatgtttagaatttgagcttttgtccactctcgtctctcatgacattg |
200 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
41277045 |
ctattaatgaagattgtgattctgaacttcacgtagtaacgtgtataatcataatgtttagaatttgagcttttgtccactctcgtctctcatgatattg |
41276946 |
T |
|
| Q |
201 |
gaatggaaatagagagtgtctttgttaacgatgacacaaatacatgcttatttgagaaccatgtctttgaagaatttat |
279 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
41276945 |
gaatggaaatagagagtgtctttgttaacgatgacacaaatacatgcttatttgagaaccatgtccttgaagaatttat |
41276867 |
T |
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