View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6216_low_3 (Length: 475)

Name: NF6216_low_3
Description: NF6216
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6216_low_3
NF6216_low_3
[»] chr5 (23 HSPs)
chr5 (197-305)||(18010022-18010124)
chr5 (370-419)||(12891597-12891646)
chr5 (370-420)||(7171768-7171818)
chr5 (377-419)||(9125709-9125751)
chr5 (370-411)||(12053500-12053541)
chr5 (370-422)||(3740994-3741046)
chr5 (370-418)||(17891841-17891889)
chr5 (370-422)||(23937911-23937963)
chr5 (370-421)||(13621925-13621976)
chr5 (118-173)||(23083579-23083634)
chr5 (370-417)||(26912873-26912920)
chr5 (370-421)||(41930145-41930196)
chr5 (370-421)||(42916429-42916480)
chr5 (370-420)||(11348769-11348819)
chr5 (370-408)||(33800930-33800968)
chr5 (381-422)||(8241101-8241142)
chr5 (370-422)||(3821399-3821451)
chr5 (370-422)||(4418320-4418372)
chr5 (370-422)||(5195123-5195175)
chr5 (370-422)||(6734717-6734768)
chr5 (377-421)||(27852651-27852695)
chr5 (370-402)||(32252945-32252977)
chr5 (370-422)||(33909045-33909097)
[»] chr2 (27 HSPs)
chr2 (37-108)||(36889666-36889737)
chr2 (37-95)||(34166951-34167009)
chr2 (370-420)||(41246426-41246476)
chr2 (370-419)||(4878249-4878298)
chr2 (370-422)||(17777141-17777193)
chr2 (370-422)||(18254629-18254681)
chr2 (370-422)||(18862292-18862344)
chr2 (118-178)||(19297526-19297586)
chr2 (370-422)||(20497173-20497225)
chr2 (376-420)||(20919656-20919700)
chr2 (370-422)||(23984201-23984253)
chr2 (370-421)||(8250280-8250331)
chr2 (370-421)||(33228912-33228963)
chr2 (370-420)||(3596290-3596340)
chr2 (370-408)||(8234812-8234850)
chr2 (370-408)||(11837026-11837064)
chr2 (370-420)||(13242711-13242761)
chr2 (370-408)||(32189994-32190032)
chr2 (370-420)||(44558042-44558092)
chr2 (60-97)||(11129961-11129998)
chr2 (118-179)||(20686676-20686737)
chr2 (377-422)||(32854579-32854624)
chr2 (370-411)||(34355761-34355802)
chr2 (370-422)||(5947906-5947958)
chr2 (370-422)||(32221007-32221059)
chr2 (370-402)||(35694806-35694838)
chr2 (370-422)||(39635340-39635392)
[»] chr7 (32 HSPs)
chr7 (370-422)||(42435198-42435250)
chr7 (370-421)||(27788309-27788360)
chr7 (370-421)||(27791465-27791516)
chr7 (370-420)||(21066926-21066976)
chr7 (37-95)||(22057334-22057393)
chr7 (370-421)||(32047129-32047180)
chr7 (370-410)||(3392507-3392547)
chr7 (370-422)||(18503458-18503510)
chr7 (370-422)||(46645749-46645801)
chr7 (370-421)||(1563718-1563769)
chr7 (370-421)||(9498006-9498057)
chr7 (370-421)||(9877246-9877297)
chr7 (370-421)||(10244868-10244919)
chr7 (370-421)||(23102537-23102588)
chr7 (370-421)||(24188510-24188561)
chr7 (370-421)||(30388486-30388537)
chr7 (370-421)||(48447789-48447840)
chr7 (370-420)||(2846040-2846090)
chr7 (372-402)||(3512684-3512714)
chr7 (370-420)||(12935780-12935830)
chr7 (370-408)||(22660778-22660816)
chr7 (370-408)||(23685574-23685612)
chr7 (372-402)||(24030024-24030054)
chr7 (370-420)||(36932013-36932063)
chr7 (370-408)||(37995566-37995604)
chr7 (370-420)||(45284799-45284849)
chr7 (370-419)||(1398884-1398933)
chr7 (375-408)||(38032875-38032908)
chr7 (370-411)||(47641085-47641126)
chr7 (370-422)||(13702065-13702117)
chr7 (370-422)||(28800126-28800178)
chr7 (370-422)||(34891246-34891298)
[»] chr8 (29 HSPs)
chr8 (370-420)||(38283164-38283214)
chr8 (370-422)||(5328545-5328597)
chr8 (370-421)||(38107453-38107504)
chr8 (370-420)||(11231460-11231510)
chr8 (370-420)||(12770408-12770458)
chr8 (375-421)||(21133052-21133098)
chr8 (370-420)||(25812189-25812239)
chr8 (370-411)||(7453392-7453433)
chr8 (377-422)||(13105138-13105183)
chr8 (370-419)||(31712589-31712638)
chr8 (370-422)||(8183360-8183412)
chr8 (370-422)||(13059155-13059207)
chr8 (370-422)||(33810680-33810732)
chr8 (370-422)||(37708731-37708783)
chr8 (370-422)||(40904571-40904623)
chr8 (370-421)||(8034391-8034442)
chr8 (375-422)||(31024339-31024386)
chr8 (370-421)||(34894409-34894460)
chr8 (370-420)||(481051-481101)
chr8 (370-416)||(13773376-13773422)
chr8 (370-420)||(22717831-22717881)
chr8 (370-420)||(34812507-34812557)
chr8 (370-411)||(26022287-26022328)
chr8 (370-410)||(1503949-1503989)
chr8 (370-402)||(9524994-9525026)
chr8 (370-410)||(23339886-23339926)
chr8 (370-402)||(24608509-24608541)
chr8 (370-422)||(34873126-34873178)
chr8 (370-422)||(36035157-36035209)
[»] chr6 (18 HSPs)
chr6 (45-95)||(20489368-20489418)
chr6 (370-422)||(2251878-2251930)
chr6 (370-422)||(32142014-32142066)
chr6 (370-422)||(32621560-32621612)
chr6 (370-421)||(30705000-30705051)
chr6 (370-420)||(27667200-27667250)
chr6 (382-422)||(3709911-3709951)
chr6 (370-422)||(18904305-18904357)
chr6 (370-421)||(7177335-7177386)
chr6 (370-421)||(8297667-8297718)
chr6 (370-421)||(31803574-31803625)
chr6 (370-408)||(9064903-9064941)
chr6 (370-408)||(9491755-9491793)
chr6 (370-420)||(17534887-17534937)
chr6 (370-408)||(26669679-26669717)
chr6 (370-420)||(35038682-35038732)
chr6 (118-179)||(12260444-12260505)
chr6 (370-421)||(1969036-1969088)
[»] chr4 (32 HSPs)
chr4 (370-420)||(45139861-45139911)
chr4 (370-422)||(11375867-11375919)
chr4 (370-422)||(30305839-30305891)
chr4 (370-422)||(36099161-36099213)
chr4 (370-421)||(11294817-11294868)
chr4 (370-421)||(29329802-29329853)
chr4 (370-420)||(51890837-51890887)
chr4 (370-419)||(23924853-23924902)
chr4 (118-179)||(27739371-27739432)
chr4 (370-422)||(624520-624572)
chr4 (370-422)||(28715730-28715782)
chr4 (382-422)||(54215813-54215853)
chr4 (370-421)||(2222579-2222630)
chr4 (370-421)||(8965134-8965185)
chr4 (370-421)||(21935517-21935568)
chr4 (370-421)||(38848099-38848150)
chr4 (370-421)||(40051662-40051713)
chr4 (370-421)||(42381092-42381143)
chr4 (370-421)||(42395267-42395318)
chr4 (370-421)||(44224466-44224517)
chr4 (370-408)||(3442880-3442918)
chr4 (370-408)||(20753145-20753183)
chr4 (370-408)||(27921933-27921971)
chr4 (374-420)||(28465754-28465800)
chr4 (118-192)||(40681500-40681574)
chr4 (370-420)||(42002346-42002396)
chr4 (370-420)||(45617304-45617354)
chr4 (370-420)||(49264566-49264616)
chr4 (382-422)||(7043936-7043976)
chr4 (370-422)||(13161787-13161838)
chr4 (370-421)||(29536149-29536201)
chr4 (378-422)||(31109308-31109352)
[»] chr3 (42 HSPs)
chr3 (370-420)||(47098556-47098606)
chr3 (370-422)||(27329910-27329962)
chr3 (370-422)||(44625203-44625255)
chr3 (370-422)||(51879135-51879187)
chr3 (375-422)||(41710628-41710675)
chr3 (370-408)||(166825-166863)
chr3 (370-420)||(19222566-19222616)
chr3 (370-420)||(24303430-24303480)
chr3 (370-411)||(32776251-32776292)
chr3 (370-411)||(53163634-53163675)
chr3 (370-422)||(7938274-7938326)
chr3 (370-422)||(15085662-15085714)
chr3 (370-422)||(25883966-25884018)
chr3 (370-422)||(34102106-34102158)
chr3 (370-421)||(17602655-17602706)
chr3 (370-421)||(29373428-29373479)
chr3 (370-421)||(32256533-32256584)
chr3 (370-421)||(34102590-34102641)
chr3 (370-421)||(39719975-39720026)
chr3 (370-421)||(41936386-41936437)
chr3 (370-421)||(43280108-43280159)
chr3 (370-421)||(47098772-47098823)
chr3 (370-421)||(48546213-48546264)
chr3 (370-421)||(48739723-48739774)
chr3 (370-421)||(49443402-49443453)
chr3 (370-421)||(50659630-50659681)
chr3 (370-421)||(51425880-51425931)
chr3 (381-420)||(52309090-52309129)
chr3 (370-421)||(53432716-53432767)
chr3 (118-180)||(32304229-32304291)
chr3 (370-420)||(35849521-35849571)
chr3 (370-420)||(38949714-38949764)
chr3 (370-411)||(13638234-13638275)
chr3 (40-104)||(52706563-52706628)
chr3 (370-421)||(1743775-1743827)
chr3 (370-410)||(5641604-5641644)
chr3 (382-422)||(8488479-8488519)
chr3 (370-402)||(27043200-27043232)
chr3 (382-422)||(40723638-40723678)
chr3 (370-422)||(41253727-41253779)
chr3 (370-410)||(45647343-45647383)
chr3 (382-422)||(55383866-55383906)
[»] chr1 (26 HSPs)
chr1 (370-422)||(18512553-18512605)
chr1 (370-420)||(1247295-1247345)
chr1 (370-422)||(50103901-50103953)
chr1 (370-421)||(7191072-7191123)
chr1 (370-417)||(16997242-16997289)
chr1 (370-421)||(21265696-21265747)
chr1 (370-417)||(35068727-35068774)
chr1 (370-421)||(48638572-48638623)
chr1 (370-420)||(11333704-11333754)
chr1 (370-420)||(11491725-11491775)
chr1 (374-420)||(11860086-11860132)
chr1 (370-420)||(23991244-23991294)
chr1 (370-408)||(24168599-24168637)
chr1 (118-180)||(36143134-36143196)
chr1 (370-420)||(36666556-36666606)
chr1 (370-420)||(45416158-45416208)
chr1 (56-97)||(5804772-5804813)
chr1 (370-419)||(8741513-8741562)
chr1 (370-411)||(10699172-10699213)
chr1 (370-419)||(23233991-23234040)
chr1 (370-411)||(33207245-33207286)
chr1 (375-408)||(34702333-34702366)
chr1 (370-422)||(1604202-1604254)
chr1 (375-419)||(3742298-3742342)
chr1 (370-422)||(13763801-13763853)
chr1 (377-421)||(44732680-44732724)
[»] scaffold0519 (1 HSPs)
scaffold0519 (370-420)||(2942-2992)
[»] scaffold0154 (1 HSPs)
scaffold0154 (370-420)||(28801-28851)
[»] scaffold0088 (1 HSPs)
scaffold0088 (370-421)||(10805-10856)
[»] scaffold0063 (1 HSPs)
scaffold0063 (370-421)||(56363-56414)
[»] scaffold0043 (1 HSPs)
scaffold0043 (370-409)||(66579-66618)
[»] scaffold0119 (1 HSPs)
scaffold0119 (370-408)||(1076-1114)
[»] scaffold0117 (1 HSPs)
scaffold0117 (375-421)||(18458-18504)
[»] scaffold1709 (1 HSPs)
scaffold1709 (370-411)||(211-252)
[»] scaffold1331 (1 HSPs)
scaffold1331 (370-411)||(69-110)


Alignment Details
Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 18010124 - 18010022
Alignment:
Q  197 tattttaagataatgttttgaatagacatagtttttattggttttatttggtagtactagttattcctcttttgatatatatccatagcaatatacaaaa 296  Q
    |||||||||||||||||||| ||||||||| || |||||||||||||||||      |||||||||||||||||||||||||||| | ||||||| ||||    
T  18010124 tattttaagataatgttttgtatagacataattcttattggttttatttgg------tagttattcctcttttgatatatatccacaccaatatataaaa 18010031  T
Q  297 aggatatat 305  Q
    |||||||||    
T  18010030 aggatatat 18010022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 12891597 - 12891646
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacattta 419  Q
    |||||||||||||||||||||||||| |||||| |||||||| |||||||    
T  12891597 tatgtaggggccggggttcgaaccccggacaccccacttctccacattta 12891646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 7171768 - 7171818
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||| ||||    
T  7171768 tatgcaggggccggggttcgaaccccagacaccccacttctccacaattaa 7171818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 419
Target Start/End: Original strand, 9125709 - 9125751
Alignment:
Q  377 gggccggggttcgaaccccagacacctcacttctcgacattta 419  Q
    ||||||||||||||||||| ||||||||||||||| |||||||    
T  9125709 gggccggggttcgaaccccggacacctcacttctccacattta 9125751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 411
Target Start/End: Complemental strand, 12053541 - 12053500
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctc 411  Q
    ||||||||||| ||||||||||||||||||||| ||||||||    
T  12053541 tatgtaggggcaggggttcgaaccccagacaccccacttctc 12053500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 3740994 - 3741046
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||| ||||||||||||||| |||||| |||||||| ||||||||||    
T  3740994 tatgcaggggtcggggttcgaaccccggacaccccacttctccacatttaaaa 3741046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Complemental strand, 17891889 - 17891841
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacattt 418  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||||||    
T  17891889 tatgcaggggccggggttcgaaccccggacaccccacttctccacattt 17891841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 23937963 - 23937911
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||||||||||||||||||| |||||| |||| ||| ||||||||||    
T  23937963 tatgcaggggccggggttcgaaccccggacaccccactcctccacatttaaaa 23937911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 13621976 - 13621925
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||| |||||    
T  13621976 tatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaa 13621925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 23083579 - 23083634
Alignment:
Q  118 acttaagggaccaaaacaatactaaataaaattttaagagacgaaaagagcaatta 173  Q
    ||||||||||||||||| |||| |||||| |  ||||| |||||||||||||||||    
T  23083579 acttaagggaccaaaacgataccaaataataacttaagggacgaaaagagcaatta 23083634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 26912873 - 26912920
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatt 417  Q
    ||||||||||||||||||||||||||| |||||  ||||||| |||||    
T  26912873 tatgtaggggccggggttcgaaccccaaacaccctacttctccacatt 26912920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 41930145 - 41930196
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| |||||| ||||||||||||||||||||| |||||||| ||| |||||    
T  41930145 tatgcaggggctggggttcgaaccccagacaccccacttctctacaattaaa 41930196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 42916429 - 42916480
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||| |||||    
T  42916429 tatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaa 42916480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 11348819 - 11348769
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    ||||||||||  |||||||||||| ||||||||||| ||||| ||||||||    
T  11348819 tatgtaggggttggggttcgaacctcagacacctcatttctccacatttaa 11348769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 408
Target Start/End: Original strand, 33800930 - 33800968
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcactt 408  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  33800930 tatgcaggggccggggttcgaaccccagacaccccactt 33800968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 422
Target Start/End: Original strand, 8241101 - 8241142
Alignment:
Q  381 cggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    ||||||||||||||| |||||| |||||||| ||||||||||    
T  8241101 cggggttcgaaccccggacaccccacttctccacatttaaaa 8241142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 3821451 - 3821399
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||||||||||||||| ||| || ||| |||||||| ||||||||||    
T  3821451 tatgcaggggccggggttcgaatcccggaaaccccacttctccacatttaaaa 3821399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 4418372 - 4418320
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| |||||| |||||||||||| | ||||||||| ||||| ||||||||||    
T  4418372 tatgcaggggctggggttcgaacctcggacacctcatttctccacatttaaaa 4418320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 5195175 - 5195123
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    ||||||||||  | |||||||||| ||||||||||||||||| | ||||||||    
T  5195175 tatgtaggggttgaggttcgaacctcagacacctcacttctctatatttaaaa 5195123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 6734768 - 6734717
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    ||||||||||||||| |||||| ||| |||||| |||||||| ||||||||||    
T  6734768 tatgtaggggccgggtttcgaatccc-gacaccccacttctccacatttaaaa 6734717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 377 - 421
Target Start/End: Complemental strand, 27852695 - 27852651
Alignment:
Q  377 gggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    ||||||||||||||||||| |||||  |||||||||||| |||||    
T  27852695 gggccggggttcgaaccccggacactccacttctcgacaattaaa 27852651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 402
Target Start/End: Complemental strand, 32252977 - 32252945
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacc 402  Q
    |||||||||| ||||||||||||||||||||||    
T  32252977 tatgtaggggtcggggttcgaaccccagacacc 32252945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 33909045 - 33909097
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    ||||||| || ||||||||||||||| ||||||  ||||||| ||||||||||    
T  33909045 tatgtagaggtcggggttcgaaccccggacacccaacttctccacatttaaaa 33909097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 36889666 - 36889737
Alignment:
Q  37 atttggggttaaccccttgacggaagggaccaaaaagtataacaaaaatgaaattaaagtattcaaatagac 108  Q
    |||||||||||||||| | |||||||||||| |||||| |||||||||| ||||||||| ||||||||||||    
T  36889666 atttggggttaaccccgtaacggaagggaccgaaaagtgtaacaaaaattaaattaaaggattcaaatagac 36889737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 34167009 - 34166951
Alignment:
Q  37 atttggggttaaccccttgacggaagggaccaaaaagtataacaaaaatgaaattaaag 95  Q
    ||||||||||||||  |||||||||| ||||||||||| ||||| ||||||||||||||    
T  34167009 atttggggttaaccttttgacggaagagaccaaaaagtgtaacataaatgaaattaaag 34166951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 41246426 - 41246476
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||||| ||||||||||||||||||| |||||| |||||||| ||||||||    
T  41246426 tatgtaagggccggggttcgaaccccggacaccccacttctctacatttaa 41246476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 4878249 - 4878298
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacattta 419  Q
    |||||||||||| ||||||||||||| |||||| |||||||| |||||||    
T  4878249 tatgtaggggccagggttcgaaccccggacaccccacttctccacattta 4878298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 17777193 - 17777141
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||| ||||||||||||||| |||||| |||||||| ||||||||||    
T  17777193 tatgcaggggtcggggttcgaaccccggacaccccacttctccacatttaaaa 17777141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 18254629 - 18254681
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| |||||||||||||||||| ||||||||| |||||||  ||||||||||    
T  18254629 tatgcaggggccggggttcgaactccagacaccccacttcttcacatttaaaa 18254681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 18862292 - 18862344
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    ||||||||||| |||||||||||||| |||||  |||||||| ||||||||||    
T  18862292 tatgtaggggcaggggttcgaacccccgacactccacttctccacatttaaaa 18862344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 19297586 - 19297526
Alignment:
Q  118 acttaagggaccaaaacaatactaaataaaattttaagagacgaaaagagcaattatgcct 178  Q
    ||||||||||||||||| |||| |||||| |  ||||| ||||||||||||||||| ||||    
T  19297586 acttaagggaccaaaacgataccaaataataacttaagggacgaaaagagcaattaagcct 19297526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 20497225 - 20497173
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    ||||||||||| |||||||||| ||| |||||| |||||||| ||||||||||    
T  20497225 tatgtaggggctggggttcgaatcccggacaccccacttctccacatttaaaa 20497173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 420
Target Start/End: Original strand, 20919656 - 20919700
Alignment:
Q  376 ggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||    
T  20919656 ggggccggggttcgaaccccggacaccccacttctccacatttaa 20919700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 23984253 - 23984201
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||||| ||||||||||||| |||||| |||||||| ||||||||||    
T  23984253 tatgcaggggccagggttcgaaccccggacaccccacttctccacatttaaaa 23984201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 8250331 - 8250280
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||||||||| |||| |||| ||| |||||    
T  8250331 tatgcaggggccggggttcgaaccccagacacttcacctctccacaattaaa 8250280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 33228963 - 33228912
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||| |||||    
T  33228963 tatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaa 33228912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 3596290 - 3596340
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| ||||| ||||||||||||||| |||||| |||||||| ||||||||    
T  3596290 tatgcaggggtcggggttcgaaccccggacaccccacttctccacatttaa 3596340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 408
Target Start/End: Complemental strand, 8234850 - 8234812
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcactt 408  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  8234850 tatgtaggggccggggttcgaaccccggacaccccactt 8234812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 408
Target Start/End: Original strand, 11837026 - 11837064
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcactt 408  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  11837026 tatgtaggggtcggggttcgaaccccggacacctcactt 11837064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 13242761 - 13242711
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| ||||| ||||||||||||| | ||||||||||||||| ||||||||    
T  13242761 tatgcaggggtcggggttcgaacctcggacacctcacttctccacatttaa 13242711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 408
Target Start/End: Complemental strand, 32190032 - 32189994
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcactt 408  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  32190032 tatgcaggggccggggttcgaaccccggacacctcactt 32189994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 44558042 - 44558092
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| |||||| |||||||||||||| |||||| |||||||| ||||||||    
T  44558042 tatgcaggggctggggttcgaaccccggacaccccacttctccacatttaa 44558092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 11129998 - 11129961
Alignment:
Q  60 aagggaccaaaaagtataacaaaaatgaaattaaagta 97  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  11129998 aagggaccaaaaagtgtaacaaaaattaaattaaagta 11129961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 20686676 - 20686737
Alignment:
Q  118 acttaagggaccaaaacaatactaaataaaattttaagagacgaaaagagcaattatgccta 179  Q
    ||||||||||||||| |||||| |||||| |  ||||| |||||||| |||||||| |||||    
T  20686676 acttaagggaccaaagcaataccaaataataacttaagggacgaaaaaagcaattaagccta 20686737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 422
Target Start/End: Original strand, 32854579 - 32854624
Alignment:
Q  377 gggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    ||||||||||||||||||| ||||||  ||||||| ||||||||||    
T  32854579 gggccggggttcgaaccccggacaccctacttctccacatttaaaa 32854624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 411
Target Start/End: Original strand, 34355761 - 34355802
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctc 411  Q
    |||| |||||||||||||||||||||||||||  ||||||||    
T  34355761 tatgcaggggccggggttcgaaccccagacactccacttctc 34355802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 5947906 - 5947958
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||| ||||||||||||||| |||||| |||| ||| ||||||||||    
T  5947906 tatgcaggggtcggggttcgaaccccggacaccccactcctccacatttaaaa 5947958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 32221007 - 32221059
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||||||||||||||||| | |||||| ||||| || ||||||||||    
T  32221007 tatgcaggggccggggttcgaacctcggacaccccacttttccacatttaaaa 32221059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 402
Target Start/End: Complemental strand, 35694838 - 35694806
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacc 402  Q
    ||||||| |||||||||||||||||||||||||    
T  35694838 tatgtagaggccggggttcgaaccccagacacc 35694806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 39635340 - 39635392
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    ||||| |||| |||||||||||| ||||||||  |||||||| ||||||||||    
T  39635340 tatgttggggtcggggttcgaactccagacactccacttctccacatttaaaa 39635392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 42435250 - 42435198
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  42435250 tatgcaggggccggggttcgaaccccagatacctcacttctccacatttaaaa 42435198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 27788309 - 27788360
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  27788309 tatgcaggggccggggttcgaaccccagacaccccacttctccacatttaaa 27788360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 27791465 - 27791516
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  27791465 tatgcaggggccggggttcgaaccccagacaccccacttctccacatttaaa 27791516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 21066926 - 21066976
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||||||||||||||||||||||||| |||| |||||||||| ||||||||    
T  21066926 tatgtaggggccggggttcgaaccccggacatctcacttctccacatttaa 21066976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 22057334 - 22057393
Alignment:
Q  37 atttggggttaaccccttgacggaagggaccaaaaa-gtataacaaaaatgaaattaaag 95  Q
    ||||||||||||| |||||||||||||||| ||||| || |||||||||| |||||||||    
T  22057334 atttggggttaactccttgacggaagggactaaaaatgtgtaacaaaaataaaattaaag 22057393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 32047129 - 32047180
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||| ||||||||||||||| ||| |||||    
T  32047129 tatgcaggggccggggttcgaaccccggacacctcacttctccacaattaaa 32047180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 410
Target Start/End: Original strand, 3392507 - 3392547
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttct 410  Q
    |||||||||| |||||||||||||||||||||| |||||||    
T  3392507 tatgtaggggtcggggttcgaaccccagacaccccacttct 3392547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 18503510 - 18503458
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| |||||| | ||||||||||||||||||| |||||||| ||||||||||    
T  18503510 tatgcaggggctgaggttcgaaccccagacaccccacttctccacatttaaaa 18503458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 46645749 - 46645801
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||||||||||||||||||| |||||| |||| ||| ||||||||||    
T  46645749 tatgcaggggccggggttcgaaccccggacaccccactcctccacatttaaaa 46645801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 1563769 - 1563718
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||| |||||    
T  1563769 tatgcaggggccggggttcgaaccccggacaccccacttctctacaattaaa 1563718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 9498006 - 9498057
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||||||||| ||||||||||||||| |||||| |||||||| ||| |||||    
T  9498006 tatgtaggggtcggggttcgaaccccggacaccccacttctccacaattaaa 9498057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 9877297 - 9877246
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||| |||||    
T  9877297 tatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaa 9877246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 10244919 - 10244868
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||||||| ||||||||||||||||| |||||| |||||||| ||| |||||    
T  10244919 tatgtaggagccggggttcgaaccccggacaccccacttctccacaattaaa 10244868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 23102588 - 23102537
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||| |||||    
T  23102588 tatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaa 23102537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 24188510 - 24188561
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||| |||||||||||||||||||||| |||||||| ||| |||||    
T  24188510 tatgcaggggtcggggttcgaaccccagacaccccacttctccacaattaaa 24188561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 30388537 - 30388486
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| |||||||||||||||||||||||||||  |||||||| ||| |||||    
T  30388537 tatgcaggggccggggttcgaaccccagacactccacttctccacaattaaa 30388486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 48447789 - 48447840
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| |||||||||||||||||||||||||||  |||||||| ||| |||||    
T  48447789 tatgcaggggccggggttcgaaccccagacactccacttctccacaattaaa 48447840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 2846090 - 2846040
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    ||||||||||  ||||||||||||| ||||||| |||||||| ||||||||    
T  2846090 tatgtaggggttggggttcgaacccaagacaccccacttctccacatttaa 2846040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 402
Target Start/End: Complemental strand, 3512714 - 3512684
Alignment:
Q  372 tgtaggggccggggttcgaaccccagacacc 402  Q
    |||||||||||||||||||||||||||||||    
T  3512714 tgtaggggccggggttcgaaccccagacacc 3512684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 12935780 - 12935830
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    ||||||||||  |||||||||||||||||| || |||||||| ||||||||    
T  12935780 tatgtaggggatggggttcgaaccccagacgccccacttctccacatttaa 12935830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 408
Target Start/End: Original strand, 22660778 - 22660816
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcactt 408  Q
    ||||||||||||||||||||||||||| ||||| |||||    
T  22660778 tatgtaggggccggggttcgaaccccaaacaccccactt 22660816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 408
Target Start/End: Complemental strand, 23685612 - 23685574
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcactt 408  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  23685612 tatgcaggggccggggttcgaaccccagacaccccactt 23685574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 402
Target Start/End: Original strand, 24030024 - 24030054
Alignment:
Q  372 tgtaggggccggggttcgaaccccagacacc 402  Q
    |||||||||||||||||||||||||||||||    
T  24030024 tgtaggggccggggttcgaaccccagacacc 24030054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 36932013 - 36932063
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| |||| |||||||||||||||| |||||| |||||||| ||||||||    
T  36932013 tatgcagggtccggggttcgaaccccggacaccccacttctctacatttaa 36932063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 408
Target Start/End: Complemental strand, 37995604 - 37995566
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcactt 408  Q
    |||| |||||||||||||| |||||||||||||||||||    
T  37995604 tatgcaggggccggggttcaaaccccagacacctcactt 37995566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 45284849 - 45284799
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| ||||| ||||||||||||||| |||||| |||||||| ||||||||    
T  45284849 tatgcaggggtcggggttcgaaccccggacaccccacttctcaacatttaa 45284799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 1398933 - 1398884
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacattta 419  Q
    |||| ||||||||||||||||| ||| |||||| |||||||| |||||||    
T  1398933 tatgcaggggccggggttcgaatcccggacaccccacttctccacattta 1398884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 408
Target Start/End: Complemental strand, 38032908 - 38032875
Alignment:
Q  375 aggggccggggttcgaaccccagacacctcactt 408  Q
    ||||||||||||||||||||| ||||||||||||    
T  38032908 aggggccggggttcgaaccccggacacctcactt 38032875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 411
Target Start/End: Original strand, 47641085 - 47641126
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctc 411  Q
    ||||||||||| ||||||||||||||||||||  ||||||||    
T  47641085 tatgtaggggctggggttcgaaccccagacactccacttctc 47641126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 13702065 - 13702117
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| |||||||||||||| |||||| |||||| |||| ||| ||||||||||    
T  13702065 tatgcaggggccggggttcaaaccccggacaccccactcctccacatttaaaa 13702117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 28800126 - 28800178
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    ||||||||||| |||||||||||  | |||||| |||||||| ||||||||||    
T  28800126 tatgtaggggcaggggttcgaacttctgacaccccacttctccacatttaaaa 28800178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 34891246 - 34891298
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| |||||||||||||||||| || |||||| |||||||| | ||||||||    
T  34891246 tatgcaggggccggggttcgaactccggacaccccacttctccatatttaaaa 34891298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 38283164 - 38283214
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||||||||    
T  38283164 tatgcaggggccggggttcgaaccccagacaccccacttctccacatttaa 38283214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 5328597 - 5328545
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||||||||||||||||||| ||||||||||||||| ||| ||||||    
T  5328597 tatgcaggggccggggttcgaaccccggacacctcacttctccacaattaaaa 5328545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 38107504 - 38107453
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||| |||||    
T  38107504 tatgcaggggccggggttcgaaccccagacaccccacttctccacaattaaa 38107453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 11231460 - 11231510
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| ||||||||||||||||||||| |||||| |||||||||||| ||||    
T  11231460 tatgcaggggccggggttcgaaccccggacaccccacttctcgacaattaa 11231510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 12770408 - 12770458
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||||||||    
T  12770408 tatgcaggggccggggttcgaaccccggacaccccacttctccacatttaa 12770458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 21133052 - 21133098
Alignment:
Q  375 aggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||||||||||||||||||||||||||| |||||||| ||| |||||    
T  21133052 aggggccggggttcgaaccccagacaccccacttctccacaattaaa 21133098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 25812239 - 25812189
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| |||| ||||||||||||||||||||||| |||||||| ||||||||    
T  25812239 tatggagggtccggggttcgaaccccagacaccccacttctcaacatttaa 25812189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 411
Target Start/End: Original strand, 7453392 - 7453433
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctc 411  Q
    |||||||||||||||||||||||||| |||||| ||||||||    
T  7453392 tatgtaggggccggggttcgaaccccggacaccccacttctc 7453433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 377 - 422
Target Start/End: Original strand, 13105138 - 13105183
Alignment:
Q  377 gggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    ||||||||||||||||| |||||||| |||||||| ||||||||||    
T  13105138 gggccggggttcgaacctcagacaccccacttctccacatttaaaa 13105183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 31712589 - 31712638
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacattta 419  Q
    |||||||||||| ||||||||||||| |||||| |||||||| |||||||    
T  31712589 tatgtaggggccagggttcgaaccccggacaccccacttctccacattta 31712638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 8183360 - 8183412
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| |||||||||||||||||||||||||| | |||||||| | ||||||||    
T  8183360 tatgcaggggccggggttcgaaccccagacaacccacttctccatatttaaaa 8183412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 13059207 - 13059155
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| |||||| |||||||||||||| |||||| |||||||| ||||||||||    
T  13059207 tatgcaggggcaggggttcgaacccctgacaccccacttctccacatttaaaa 13059155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 33810680 - 33810732
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| |||||||||||||| |||||| |||||| |||||||| ||||||||||    
T  33810680 tatgcaggggccggggttcaaaccccggacaccccacttctccacatttaaaa 33810732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 37708731 - 37708783
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||||||||||||||||||| |||| | |||||||| ||||||||||    
T  37708731 tatgcaggggccggggttcgaaccccggacatcccacttctccacatttaaaa 37708783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 40904571 - 40904623
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    ||||||||||  |||||||||||| | ||||||||||||||| ||||||||||    
T  40904571 tatgtaggggttggggttcgaacctcggacacctcacttctccacatttaaaa 40904623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 8034442 - 8034391
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| |||||||||||||||||| ||||||||| |||||||| ||| |||||    
T  8034442 tatgcaggggccggggttcgaacaccagacaccccacttctccacaattaaa 8034391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 422
Target Start/End: Original strand, 31024339 - 31024386
Alignment:
Q  375 aggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||||| |||||||||||||| |||||| |||||||| ||||||||||    
T  31024339 aggggctggggttcgaaccccggacaccccacttctccacatttaaaa 31024386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 34894409 - 34894460
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||| |||||    
T  34894409 tatgcaggggccggggttcgaaccccggacaccccacttctccacagttaaa 34894460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 481051 - 481101
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| |||||||| |||||||||||| |||||| |||||||| ||||||||    
T  481051 tatgcaggggccgcggttcgaaccccggacaccccacttctccacatttaa 481101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 416
Target Start/End: Complemental strand, 13773422 - 13773376
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacat 416  Q
    |||||||| ||||||||||||||||| ||||| ||||||||| ||||    
T  13773422 tatgtaggagccggggttcgaaccccggacacttcacttctccacat 13773376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 22717831 - 22717881
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| |||||||| |||||||||||| |||||| |||||||||||| ||||    
T  22717831 tatgcaggggccgaggttcgaaccccggacaccccacttctcgacaattaa 22717881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 34812557 - 34812507
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| |||||| |||||||||||||| |||||| |||||||| ||||||||    
T  34812557 tatgcaggggctggggttcgaaccccggacaccccacttctccacatttaa 34812507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 411
Target Start/End: Original strand, 26022287 - 26022328
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctc 411  Q
    |||| |||||||||||||||||||||||||||  ||||||||    
T  26022287 tatgcaggggccggggttcgaaccccagacactccacttctc 26022328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 410
Target Start/End: Original strand, 1503949 - 1503989
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttct 410  Q
    |||| ||| |||||||||||||||||||||||| |||||||    
T  1503949 tatgcaggagccggggttcgaaccccagacaccccacttct 1503989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 402
Target Start/End: Original strand, 9524994 - 9525026
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacc 402  Q
    |||| ||||||||||||||||||||||||||||    
T  9524994 tatgcaggggccggggttcgaaccccagacacc 9525026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 410
Target Start/End: Complemental strand, 23339926 - 23339886
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttct 410  Q
    |||||||||||||||||||||||||  |||||| |||||||    
T  23339926 tatgtaggggccggggttcgaaccctggacaccccacttct 23339886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 402
Target Start/End: Complemental strand, 24608541 - 24608509
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacc 402  Q
    |||| ||||||||||||||||||||||||||||    
T  24608541 tatgcaggggccggggttcgaaccccagacacc 24608509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 34873126 - 34873178
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||| ||||||||||||| | |||||| |||||||| ||||||||||    
T  34873126 tatgcaggggtcggggttcgaacctcggacaccccacttctccacatttaaaa 34873178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 36035209 - 36035157
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||| ||||||||||||| | |||||| |||||||| ||||||||||    
T  36035209 tatgcaggggtcggggttcgaacctcggacaccccacttctccacatttaaaa 36035157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 20489368 - 20489418
Alignment:
Q  45 ttaaccccttgacggaagggaccaaaaagtataacaaaaatgaaattaaag 95  Q
    |||||||||||||||||||||||||||||| |||| ||||| |||||||||    
T  20489368 ttaaccccttgacggaagggaccaaaaagtgtaacgaaaataaaattaaag 20489418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 2251878 - 2251930
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  2251878 tatgcaggggccggggttcgaaccccggacaccccacttctccacatttaaaa 2251930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 32142066 - 32142014
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    ||||||||||| ||||||||||||||||||||| ||||| || ||||||||||    
T  32142066 tatgtaggggctggggttcgaaccccagacaccccacttttccacatttaaaa 32142014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 32621612 - 32621560
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  32621612 tatgcaggggccggggttcgaatcccagacaccccacttctccacatttaaaa 32621560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 30705000 - 30705051
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||||||||||||||||||||||||| |||||| |||||||| ||| |||||    
T  30705000 tatgtaggggccggggttcgaaccccggacaccccacttctccacaattaaa 30705051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 27667200 - 27667250
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||||||||    
T  27667200 tatgcaggggccggggttcgaaccccggacaccccacttctccacatttaa 27667250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 422
Target Start/End: Original strand, 3709911 - 3709951
Alignment:
Q  382 ggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    ||||||||||||||||||||| |||||||| ||||||||||    
T  3709911 ggggttcgaaccccagacaccccacttctccacatttaaaa 3709951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 18904305 - 18904357
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||| ||||||||||||||| |||||| |||||||| ||||||||||    
T  18904305 tatgcaggggtcggggttcgaaccccggacaccccacttctccacatttaaaa 18904357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 7177335 - 7177386
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| |||||| ||||||||||||||||||||| |||||||| ||| |||||    
T  7177335 tatgcaggggctggggttcgaaccccagacaccccacttctccacaattaaa 7177386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 8297667 - 8297718
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||| |||||    
T  8297667 tatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaa 8297718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 31803625 - 31803574
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    ||||||||||||||| |||||||||  ||||||||||||||| ||| |||||    
T  31803625 tatgtaggggccgggattcgaaccctggacacctcacttctccacaattaaa 31803574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 408
Target Start/End: Original strand, 9064903 - 9064941
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcactt 408  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  9064903 tatgcaggggccggggttcgaaccccagacaccccactt 9064941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 408
Target Start/End: Complemental strand, 9491793 - 9491755
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcactt 408  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  9491793 tatgtaggggccggggttcgaaccccggacaccccactt 9491755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 17534887 - 17534937
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| |||||||||||||||||| || ||||||| ||||||| ||||||||    
T  17534887 tatgcaggggccggggttcgaactccggacacctgacttctccacatttaa 17534937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 408
Target Start/End: Complemental strand, 26669717 - 26669679
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcactt 408  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  26669717 tatgtaggggctggggttcgaaccccagacaccccactt 26669679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 35038732 - 35038682
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| ||||||||||||||||||||| |||||| || ||||| ||||||||    
T  35038732 tatgcaggggccggggttcgaaccccggacaccccatttctctacatttaa 35038682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 12260505 - 12260444
Alignment:
Q  118 acttaagggaccaaaacaatactaaataaaattttaagagacgaaaagagcaattatgccta 179  Q
    ||||||||||||||| | |||| |||||| |  ||||| ||||||||||||||||| |||||    
T  12260505 acttaagggaccaaagcgataccaaataataacttaagggacgaaaagagcaattaagccta 12260444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 1969036 - 1969088
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagaca-cctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||| |||| || |||||||||||| |||||    
T  1969036 tatgcaggggccggggttcgaaccccggacacccccacttctcgacaattaaa 1969088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 45139911 - 45139861
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  45139911 tatgcaggggccggggttcgaaccccggacacctcacttctccacatttaa 45139861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 11375919 - 11375867
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||||||||||||||||||| ||||||||||||||| ||| ||||||    
T  11375919 tatgcaggggccggggttcgaaccccggacacctcacttctccacaattaaaa 11375867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 30305839 - 30305891
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| |||||| |||||||||||||| ||||||||||||||| ||||||||||    
T  30305839 tatgcaggggctggggttcgaaccccggacacctcacttctccacatttaaaa 30305891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 36099213 - 36099161
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  36099213 tatgcaggggccggggttcgaaccccggacaccccacttctccacatttaaaa 36099161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 11294868 - 11294817
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||| |||||| |||||||| |||||||||    
T  11294868 tatgcaggggccggggttcgaaccccggacaccccacttctccacatttaaa 11294817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 29329853 - 29329802
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    ||||||||||||||||||||||||||||||||  |||||||| ||| |||||    
T  29329853 tatgtaggggccggggttcgaaccccagacactccacttctccacaattaaa 29329802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 51890837 - 51890887
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||||||||    
T  51890837 tatgcaggggccggggttcgaaccccggacaccccacttctccacatttaa 51890887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 419
Target Start/End: Complemental strand, 23924902 - 23924853
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacattta 419  Q
    |||| ||||||||||||||||||||| ||||| ||||||||| |||||||    
T  23924902 tatgcaggggccggggttcgaaccccggacacttcacttctccacattta 23924853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 27739432 - 27739371
Alignment:
Q  118 acttaagggaccaaaacaatactaaataaaattttaagagacgaaaagagcaattatgccta 179  Q
    |||||||||| ||||   |||||||||||||  ||||||||||||||||||||||| |||||    
T  27739432 acttaagggatcaaagtgatactaaataaaaacttaagagacgaaaagagcaattaagccta 27739371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 624520 - 624572
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| |||||| |||||||||||||| |||||| |||||||| ||||||||||    
T  624520 tatgcaggggcaggggttcgaacccctgacaccccacttctccacatttaaaa 624572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 28715730 - 28715782
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||||||||||||||||||| |||||  |||||||| ||||||||||    
T  28715730 tatgcaggggccggggttcgaaccccggacactccacttctccacatttaaaa 28715782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 422
Target Start/End: Original strand, 54215813 - 54215853
Alignment:
Q  382 ggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    ||||||||||||||||||||| |||||||| ||||||||||    
T  54215813 ggggttcgaaccccagacaccccacttctccacatttaaaa 54215853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 2222579 - 2222630
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||| |||||    
T  2222579 tatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaa 2222630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 8965134 - 8965185
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||| |||||    
T  8965134 tatgcaggggccggggttcgaaccccggacaccccacttctctacaattaaa 8965185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 21935517 - 21935568
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||| |||||    
T  21935517 tatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaa 21935568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 38848150 - 38848099
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||| ||||||||||||||| |||||| |||||||| |||||||||    
T  38848150 tatgcaggggtcggggttcgaaccccggacaccccacttctccacatttaaa 38848099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 40051662 - 40051713
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    ||||||||||  ||||||||||||||||||||| |||||||| ||| |||||    
T  40051662 tatgtaggggtaggggttcgaaccccagacaccccacttctccacaattaaa 40051713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 42381143 - 42381092
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||||||||| ||||||||||||| |||||||| |||||||| ||| |||||    
T  42381143 tatgtaggggtcggggttcgaacctcagacaccccacttctccacaattaaa 42381092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 42395267 - 42395318
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    ||||||||||||||||||||||| || |||||| |||||||| ||| |||||    
T  42395267 tatgtaggggccggggttcgaactccggacaccccacttctccacaattaaa 42395318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 44224517 - 44224466
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    ||||||||||||| |||||||||| |||||||| |||||||| ||| |||||    
T  44224517 tatgtaggggccgaggttcgaacctcagacaccccacttctccacaattaaa 44224466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 408
Target Start/End: Original strand, 3442880 - 3442918
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcactt 408  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  3442880 tatgtcggggccggggttcgaaccccagacaccccactt 3442918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 408
Target Start/End: Complemental strand, 20753183 - 20753145
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcactt 408  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  20753183 tatgtaggggccggggttcgaaccccggacaccacactt 20753145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 408
Target Start/End: Original strand, 27921933 - 27921971
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcactt 408  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  27921933 tatgcaggggccggggttcgaaccccagacatctcactt 27921971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 420
Target Start/End: Complemental strand, 28465800 - 28465754
Alignment:
Q  374 taggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||||| |||||||||||| |||||||||||||||||| ||| ||||    
T  28465800 taggggtcggggttcgaactccagacacctcacttctccacaattaa 28465754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 40681500 - 40681574
Alignment:
Q  118 acttaagggaccaaaacaatactaaataaaattttaagagacgaaaagagcaattatgcctatatattttatatt 192  Q
    ||||||||||||||| | |||| |||||| |  ||||| ||||||||||||||||| |||||  |||||| ||||    
T  40681500 acttaagggaccaaagcgataccaaataataacttaagggacgaaaagagcaattaagcctaattattttgtatt 40681574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 42002346 - 42002396
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    ||||||||||||| |||| ||||| |||||||| |||||||| ||||||||    
T  42002346 tatgtaggggccgtggtttgaacctcagacaccccacttctccacatttaa 42002396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 45617304 - 45617354
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| |||||||||||||| |||||| ||||||||||| ||| ||||||||    
T  45617304 tatgcaggggccggggttctaaccccggacacctcactcctccacatttaa 45617354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 49264566 - 49264616
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| |||||||| |||||||||||| |||||| |||||||| ||||||||    
T  49264566 tatgcaggggccgaggttcgaaccccggacaccccacttctccacatttaa 49264616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 422
Target Start/End: Original strand, 7043936 - 7043976
Alignment:
Q  382 ggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    ||||||||||| |||||| ||||||||||| ||||||||||    
T  7043936 ggggttcgaactccagactcctcacttctccacatttaaaa 7043976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 13161787 - 13161838
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||| |||||||||||||||||||||  |||||||| ||||||||||    
T  13161787 tatgcaggggtcggggttcgaaccccagacacaccacttctc-acatttaaaa 13161838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 29536149 - 29536201
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacct-cacttctcgacatttaaa 421  Q
    |||| |||||||| |||||||||||||||||||| |||||||| ||| |||||    
T  29536149 tatgcaggggccgaggttcgaaccccagacacctccacttctccacaattaaa 29536201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 422
Target Start/End: Original strand, 31109308 - 31109352
Alignment:
Q  378 ggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||||||||||||||||| |||| |||| ||||| ||||||||||    
T  31109308 ggccggggttcgaaccccggacatctcatttctccacatttaaaa 31109352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 47098556 - 47098606
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| |||||||| |||||||||||||||||||||||||||| ||||||||    
T  47098556 tatgcaggggccgaggttcgaaccccagacacctcacttctccacatttaa 47098606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 27329962 - 27329910
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  27329962 tatgcaggggccggggttcgaaccccggacaccccacttctccacatttaaaa 27329910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 44625255 - 44625203
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  44625255 tatgcaggggccggggttcgaaccccggacaccccacttctccacatttaaaa 44625203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 51879135 - 51879187
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  51879135 tatgcaggggccggggttcgaaccccggacaccccacttctccacatttaaaa 51879187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 375 - 422
Target Start/End: Original strand, 41710628 - 41710675
Alignment:
Q  375 aggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    ||||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  41710628 aggggccggggttcgaatcccggacacctcacttctccacatttaaaa 41710675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 408
Target Start/End: Original strand, 166825 - 166863
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcactt 408  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  166825 tatgcaggggccggggttcgaaccccagacacctcactt 166863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 19222616 - 19222566
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||||||||    
T  19222616 tatgcaggggccggggttcgaaccccggacaccccacttctccacatttaa 19222566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 24303430 - 24303480
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||||||||    
T  24303430 tatgcaggggccggggttcgaaccccggacaccccacttctccacatttaa 24303480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 411
Target Start/End: Original strand, 32776251 - 32776292
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctc 411  Q
    |||| ||||||||||||||||||||| |||||||||||||||    
T  32776251 tatgcaggggccggggttcgaaccccggacacctcacttctc 32776292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 411
Target Start/End: Original strand, 53163634 - 53163675
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctc 411  Q
    |||||||||||||||||||||||||| |||||| ||||||||    
T  53163634 tatgtaggggccggggttcgaaccccggacaccccacttctc 53163675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 7938326 - 7938274
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||||||||| |||||||||||||||||||||  |||||||| ||| ||||||    
T  7938326 tatgtaggggtcggggttcgaaccccagacactccacttctccacaattaaaa 7938274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 15085714 - 15085662
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||| ||||||||||||||| ||||||||||||||| | ||||||||    
T  15085714 tatgcaggggtcggggttcgaaccccggacacctcacttctccatatttaaaa 15085662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 25884018 - 25883966
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||| ||||||||||||||| |||||| |||||||| ||||||||||    
T  25884018 tatgcaggggtcggggttcgaaccccggacaccccacttctccacatttaaaa 25883966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 34102106 - 34102158
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| |||||| |||||||||||||| ||||||||| ||||| ||||||||||    
T  34102106 tatgcaggggctggggttcgaaccccggacacctcatttctccacatttaaaa 34102158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 17602706 - 17602655
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    ||||||||||||| |||||||||||| |||||| |||||||| ||| |||||    
T  17602706 tatgtaggggccgaggttcgaaccccggacaccccacttctccacaattaaa 17602655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 29373479 - 29373428
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||| |||||||| |||||||| ||| |||||    
T  29373479 tatgcaggggccggggttcgaacctcagacaccccacttctccacaattaaa 29373428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 32256584 - 32256533
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||| |||||    
T  32256584 tatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaa 32256533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 34102641 - 34102590
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||| |||||    
T  34102641 tatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaa 34102590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 39719975 - 39720026
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||| |||||    
T  39719975 tatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaa 39720026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 41936437 - 41936386
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||| |||||    
T  41936437 tatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaa 41936386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 43280108 - 43280159
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||| ||| |||||| |||||||| |||||||||    
T  43280108 tatgcaggggccggggttcgaatcccggacaccccacttctccacatttaaa 43280159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 47098772 - 47098823
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| |||||||||||||||||||||||||||  |||||||| ||| |||||    
T  47098772 tatgcaggggccggggttcgaaccccagacactccacttctccacaattaaa 47098823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 48546213 - 48546264
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||||||||  ||||||||||||||| ||||||||||||||| ||| |||||    
T  48546213 tatgtagggatcggggttcgaaccccggacacctcacttctctacaattaaa 48546264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 48739774 - 48739723
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| |||||| ||||||||||||||||||||| |||||||| ||| |||||    
T  48739774 tatgcaggggctggggttcgaaccccagacaccccacttctccacaattaaa 48739723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 49443453 - 49443402
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||| ||||||||||| |||||| |||||||| |||||||||    
T  49443453 tatgcaggggccggagttcgaaccccggacaccccacttctccacatttaaa 49443402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 50659630 - 50659681
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||| |||||  |||||||||||| |||||    
T  50659630 tatgcaggggccggggttcgaaccccggacactccacttctcgacaattaaa 50659681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 51425880 - 51425931
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||  ||||| ||||||||||||| |||||    
T  51425880 tatgcaggggccggggttcgaaccctggacacttcacttctcgacaattaaa 51425931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 420
Target Start/End: Complemental strand, 52309129 - 52309090
Alignment:
Q  381 cggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  52309129 cggggttcgaaccccagacaccccacttctccacatttaa 52309090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 53432767 - 53432716
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||| |||||    
T  53432767 tatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaa 53432716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 32304291 - 32304229
Alignment:
Q  118 acttaagggaccaaaacaatactaaataaaattttaagagacgaaaagagcaattatgcctat 180  Q
    ||||||||||||||| | |||| |||||| |  ||||| ||||||||||||||||| ||||||    
T  32304291 acttaagggaccaaagcgataccaaataataacttaagggacgaaaagagcaattaagcctat 32304229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 35849521 - 35849571
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| |||||||||||||||||||||| ||||| ||||||||  |||||||    
T  35849521 tatgcaggggccggggttcgaaccccaaacaccccacttctccccatttaa 35849571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 38949714 - 38949764
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| |||||||||||||||||||||  ||||| |||||||| ||||||||    
T  38949714 tatgcaggggccggggttcgaaccccgaacaccccacttctccacatttaa 38949764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 411
Target Start/End: Complemental strand, 13638275 - 13638234
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctc 411  Q
    ||||||||||| ||||||||||||||||||||  ||||||||    
T  13638275 tatgtaggggctggggttcgaaccccagacactccacttctc 13638234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 52706563 - 52706628
Alignment:
Q  40 tggggttaaccccttgacggaaggga-ccaaaaagtataacaaaaatgaaattaaagtattcaaat 104  Q
    ||||||||| || ||||||||||||| | ||||||| |||| ||| | ||||||||||||||||||    
T  52706563 tggggttaatccattgacggaagggatcaaaaaagtgtaacgaaagttaaattaaagtattcaaat 52706628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 1743827 - 1743775
Alignment:
Q  370 tatgtaggggccggggttcgaa-ccccagacacctcacttctcgacatttaaa 421  Q
    |||||||||||||||||||||| |||| |||||  |||||||||||| |||||    
T  1743827 tatgtaggggccggggttcgaacccccggacactccacttctcgacagttaaa 1743775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 410
Target Start/End: Complemental strand, 5641644 - 5641604
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttct 410  Q
    |||| ||||||||||||||||||| | ||||||||||||||    
T  5641644 tatgcaggggccggggttcgaacctcggacacctcacttct 5641604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 422
Target Start/End: Original strand, 8488479 - 8488519
Alignment:
Q  382 ggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||||||||||||  ||||||||||||||| ||||||||||    
T  8488479 ggggttcgaacccttgacacctcacttctccacatttaaaa 8488519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 402
Target Start/End: Complemental strand, 27043232 - 27043200
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacc 402  Q
    ||||||||||||||||||| |||||||||||||    
T  27043232 tatgtaggggccggggttcaaaccccagacacc 27043200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 422
Target Start/End: Complemental strand, 40723678 - 40723638
Alignment:
Q  382 ggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    ||||||||||||  |||||||||||||||| ||||||||||    
T  40723678 ggggttcgaaccttagacacctcacttctccacatttaaaa 40723638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 41253779 - 41253727
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| |||||||||||||||||||||  ||||||||||| || | ||||||||    
T  41253779 tatgcaggggccggggttcgaaccccgaacacctcacttttccatatttaaaa 41253727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 410
Target Start/End: Original strand, 45647343 - 45647383
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttct 410  Q
    |||| ||||| ||||||||||||||| ||||||||||||||    
T  45647343 tatgcagggggcggggttcgaaccccggacacctcacttct 45647383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 422
Target Start/End: Complemental strand, 55383906 - 55383866
Alignment:
Q  382 ggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||||||||||||| |||||| |||||||| ||||||||||    
T  55383906 ggggttcgaacccctgacaccccacttctccacatttaaaa 55383866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 18512605 - 18512553
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  18512605 tatgcaggggccggggttcgaaccccggacaccccacttctccacatttaaaa 18512553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 1247295 - 1247345
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| ||||| || |||||||||||||||||||||||||||| ||||||||    
T  1247295 tatgcaggggtcgaggttcgaaccccagacacctcacttctccacatttaa 1247345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 50103901 - 50103953
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||||||||| | ||||||||||||  ||||||||||||||| ||||||||||    
T  50103901 tatgtaggggtcagggttcgaaccctggacacctcacttctccacatttaaaa 50103953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 7191072 - 7191123
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| |||||| |||||||||||||| ||||||||||||||| ||| |||||    
T  7191072 tatgcaggggctggggttcgaaccccggacacctcacttctccacaattaaa 7191123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 417
Target Start/End: Complemental strand, 16997289 - 16997242
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatt 417  Q
    |||| |||||||| |||||||||||| ||||||||||||||| |||||    
T  16997289 tatgcaggggccgaggttcgaaccccggacacctcacttctccacatt 16997242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 21265696 - 21265747
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||| |||||    
T  21265696 tatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaa 21265747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 35068727 - 35068774
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatt 417  Q
    |||| ||||||||||||||||||||| |||||| |||||||| |||||    
T  35068727 tatggaggggccggggttcgaaccccggacaccccacttctccacatt 35068774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 48638572 - 48638623
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| |||||| ||||||||||||||||||||| |||||||| ||| |||||    
T  48638572 tatgcaggggctggggttcgaaccccagacaccccacttctccacaattaaa 48638623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 11333704 - 11333754
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| ||||||||| ||||||||||| |||||| |||||||| ||||||||    
T  11333704 tatgcaggggccggagttcgaaccccggacaccccacttctccacatttaa 11333754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Original strand, 11491725 - 11491775
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| ||||||||| ||||||||||| |||||| |||||||| ||||||||    
T  11491725 tatgcaggggccggagttcgaaccccggacaccccacttctccacatttaa 11491775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 420
Target Start/End: Original strand, 11860086 - 11860132
Alignment:
Q  374 taggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||||| ||||||||||||||| |||||| |||||||| ||||||||    
T  11860086 taggggtcggggttcgaaccccggacaccccacttctccacatttaa 11860132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 23991294 - 23991244
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| ||||||||||||||||||||  |||||| |||||||| ||||||||    
T  23991294 tatgcaggggccggggttcgaaccctggacaccccacttctccacatttaa 23991244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 408
Target Start/End: Complemental strand, 24168637 - 24168599
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcactt 408  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  24168637 tatgtagggaccggggttcgaaccccagacaccccactt 24168599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 36143134 - 36143196
Alignment:
Q  118 acttaagggaccaaaacaatactaaataaaattttaagagacgaaaagagcaattatgcctat 180  Q
    ||||||||||||||| | |||| |||||| |  ||||| ||||||||||||||||| ||||||    
T  36143134 acttaagggaccaaatcgataccaaataataacttaagggacgaaaagagcaattaagcctat 36143196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 36666606 - 36666556
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||| ||||    
T  36666606 tatgcaggggccggggttcgaaccccggacaccccacttctccacaattaa 36666556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 45416208 - 45416158
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| ||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  45416208 tatgcaggggccggggttcgaatcccggacaccccacttctccacatttaa 45416158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 5804813 - 5804772
Alignment:
Q  56 acggaagggaccaaaaagtataacaaaaatgaaattaaagta 97  Q
    ||||||||||||||||| | |||||||||| |||||||||||    
T  5804813 acggaagggaccaaaaaatgtaacaaaaattaaattaaagta 5804772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 8741513 - 8741562
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacattta 419  Q
    |||| |||||| |||||||||||||| |||||| |||||||| |||||||    
T  8741513 tatgcaggggcaggggttcgaacccctgacaccccacttctccacattta 8741562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 411
Target Start/End: Complemental strand, 10699213 - 10699172
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctc 411  Q
    |||||||||||||||||||||| ||| ||||||| |||||||    
T  10699213 tatgtaggggccggggttcgaatcccggacacctaacttctc 10699172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 419
Target Start/End: Original strand, 23233991 - 23234040
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacattta 419  Q
    |||| ||||| ||||||||||||||||||||||  ||||||| |||||||    
T  23233991 tatgcaggggtcggggttcgaaccccagacaccctacttctccacattta 23234040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 411
Target Start/End: Original strand, 33207245 - 33207286
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctc 411  Q
    |||| ||||||||||||||||||||| |||||| ||||||||    
T  33207245 tatgcaggggccggggttcgaaccccggacaccccacttctc 33207286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 408
Target Start/End: Complemental strand, 34702366 - 34702333
Alignment:
Q  375 aggggccggggttcgaaccccagacacctcactt 408  Q
    ||||||||||||||||||||| ||||||||||||    
T  34702366 aggggccggggttcgaaccccggacacctcactt 34702333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 422
Target Start/End: Complemental strand, 1604254 - 1604202
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||||||||| ||||||||||||||  |||||| || ||||| ||||||||||    
T  1604254 tatgtaggggtcggggttcgaacccttgacaccacaattctccacatttaaaa 1604202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 375 - 419
Target Start/End: Complemental strand, 3742342 - 3742298
Alignment:
Q  375 aggggccggggttcgaaccccagacacctcacttctcgacattta 419  Q
    ||||| ||||||||||||||| |||||| |||||||| |||||||    
T  3742342 aggggtcggggttcgaaccccggacaccccacttctccacattta 3742298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 13763801 - 13763853
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaaa 422  Q
    |||| |||||| |||||||||||||| || ||| |||||||| ||||||||||    
T  13763801 tatgcaggggctggggttcgaaccccggataccccacttctctacatttaaaa 13763853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 377 - 421
Target Start/End: Original strand, 44732680 - 44732724
Alignment:
Q  377 gggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    ||||||||||||||||||| |||||| |||||||| ||| |||||    
T  44732680 gggccggggttcgaaccccggacaccccacttctccacaattaaa 44732724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 2992 - 2942
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| ||||||||||||||||||||| |||||| |||||||||||| ||||    
T  2992 tatgcaggggccggggttcgaaccccggacaccccacttctcgacaattaa 2942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 28851 - 28801
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaa 420  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||||||||    
T  28851 tatgcaggggccggggttcgaaccccggacaccccacttctccacatttaa 28801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 10856 - 10805
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||| |||||| |||||||| ||| |||||    
T  10856 tatgcaggggccggggttcgaaccccggacaccccacttctccacaattaaa 10805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 421
Target Start/End: Original strand, 56363 - 56414
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    |||| ||||||||||||||||||||||||||| ||| ||||| ||| |||||    
T  56363 tatgcaggggccggggttcgaaccccagacacttcatttctccacaattaaa 56414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 409
Target Start/End: Complemental strand, 66618 - 66579
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttc 409  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  66618 tatgcaggggccggggttcgaaccccggacacctcacttc 66579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 408
Target Start/End: Original strand, 1076 - 1114
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcactt 408  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  1076 tatgtaggggctggggttcgaaccccagacaccccactt 1114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 421
Target Start/End: Complemental strand, 18504 - 18458
Alignment:
Q  375 aggggccggggttcgaaccccagacacctcacttctcgacatttaaa 421  Q
    ||||||||||||||||||||| |||||| |||||||| ||| |||||    
T  18504 aggggccggggttcgaaccccggacaccccacttctccacaattaaa 18458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1709 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1709
Description:

Target: scaffold1709; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 411
Target Start/End: Original strand, 211 - 252
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctc 411  Q
    |||| |||||||||||||||||||||| |||| |||||||||    
T  211 tatgcaggggccggggttcgaaccccaaacacttcacttctc 252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 411
Target Start/End: Complemental strand, 110 - 69
Alignment:
Q  370 tatgtaggggccggggttcgaaccccagacacctcacttctc 411  Q
    |||| |||||||||||||||||||||| |||| |||||||||    
T  110 tatgcaggggccggggttcgaaccccaaacacttcacttctc 69  T

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