View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6217_low_14 (Length: 201)

Name: NF6217_low_14
Description: NF6217
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6217_low_14
NF6217_low_14
[»] chr2 (35 HSPs)
chr2 (63-201)||(41197361-41197501)
chr2 (63-201)||(38429893-38430032)
chr2 (63-201)||(41763176-41763315)
chr2 (63-201)||(11992242-11992381)
chr2 (87-201)||(12734708-12734822)
chr2 (63-201)||(2610597-2610736)
chr2 (100-201)||(25834690-25834791)
chr2 (63-194)||(23997630-23997762)
chr2 (63-189)||(451782-451909)
chr2 (98-201)||(3866081-3866184)
chr2 (63-201)||(45367759-45367898)
chr2 (87-201)||(24583791-24583905)
chr2 (63-200)||(38452820-38452957)
chr2 (87-201)||(8180789-8180903)
chr2 (63-200)||(18424511-18424649)
chr2 (63-201)||(36183460-36183599)
chr2 (63-201)||(3243787-3243926)
chr2 (63-201)||(4807605-4807743)
chr2 (98-189)||(6237923-6238014)
chr2 (63-168)||(7326294-7326400)
chr2 (132-201)||(43238298-43238366)
chr2 (142-201)||(16097200-16097259)
chr2 (64-153)||(39029638-39029728)
chr2 (101-201)||(43752120-43752220)
chr2 (63-139)||(28508749-28508826)
chr2 (16-53)||(41196189-41196226)
chr2 (142-197)||(41858744-41858799)
chr2 (142-201)||(44437935-44437994)
chr2 (101-199)||(6218978-6219076)
chr2 (102-201)||(11017323-11017422)
chr2 (96-190)||(3481161-3481255)
chr2 (96-201)||(12141553-12141658)
chr2 (144-197)||(41330142-41330195)
chr2 (142-194)||(13240959-13241011)
chr2 (96-201)||(18958916-18959025)
[»] chr7 (50 HSPs)
chr7 (63-201)||(43281683-43281822)
chr7 (63-201)||(12841409-12841548)
chr7 (63-201)||(29650393-29650532)
chr7 (97-201)||(45836649-45836753)
chr7 (63-201)||(44855306-44855445)
chr7 (63-201)||(2885856-2885995)
chr7 (63-201)||(31005232-31005371)
chr7 (63-201)||(33072961-33073100)
chr7 (63-201)||(33349940-33350079)
chr7 (63-201)||(38607013-38607152)
chr7 (63-201)||(37617953-37618093)
chr7 (63-201)||(13859142-13859281)
chr7 (63-201)||(35906335-35906474)
chr7 (63-201)||(49029285-49029424)
chr7 (63-199)||(35559127-35559264)
chr7 (63-201)||(11593969-11594108)
chr7 (63-201)||(34869429-34869568)
chr7 (63-201)||(46355990-46356129)
chr7 (63-199)||(31682736-31682873)
chr7 (100-201)||(39906542-39906643)
chr7 (63-198)||(36652004-36652140)
chr7 (63-201)||(22349629-22349768)
chr7 (64-201)||(43491317-43491455)
chr7 (96-201)||(36869412-36869517)
chr7 (63-169)||(32631617-32631724)
chr7 (96-200)||(15682184-15682288)
chr7 (63-201)||(6374877-6375016)
chr7 (98-201)||(7273048-7273151)
chr7 (106-201)||(46014359-46014453)
chr7 (87-199)||(23404429-23404540)
chr7 (64-152)||(24598322-24598411)
chr7 (101-199)||(40169660-40169758)
chr7 (96-201)||(36136773-36136878)
chr7 (96-201)||(7189388-7189499)
chr7 (103-201)||(19262609-19262706)
chr7 (96-192)||(38135381-38135476)
chr7 (142-201)||(27021906-27021965)
chr7 (142-201)||(47848683-47848742)
chr7 (63-156)||(7273154-7273248)
chr7 (100-201)||(8492405-8492506)
chr7 (109-201)||(12966031-12966123)
chr7 (145-201)||(36514424-36514480)
chr7 (110-201)||(26742078-26742169)
chr7 (96-198)||(25579245-25579347)
chr7 (101-201)||(27893724-27893821)
chr7 (171-201)||(32630603-32630633)
chr7 (97-158)||(33139206-33139267)
chr7 (142-199)||(35713706-35713763)
chr7 (151-200)||(47796359-47796408)
chr7 (145-201)||(38920803-38920859)
[»] chr6 (24 HSPs)
chr6 (63-201)||(5258282-5258421)
chr6 (63-201)||(32755930-32756069)
chr6 (63-199)||(10099993-10100130)
chr6 (63-201)||(30031265-30031404)
chr6 (63-201)||(35043575-35043714)
chr6 (87-201)||(608166-608280)
chr6 (87-201)||(5631831-5631945)
chr6 (63-201)||(20427770-20427909)
chr6 (63-201)||(28085385-28085524)
chr6 (64-201)||(14030816-14030954)
chr6 (63-201)||(21351971-21352110)
chr6 (96-199)||(30679417-30679520)
chr6 (96-197)||(9593874-9593975)
chr6 (87-201)||(9706785-9706893)
chr6 (70-161)||(7133795-7133887)
chr6 (70-161)||(7136718-7136810)
chr6 (100-201)||(33496970-33497071)
chr6 (96-201)||(2689649-2689754)
chr6 (133-201)||(24665819-24665887)
chr6 (63-201)||(28026961-28027099)
chr6 (97-201)||(12890593-12890688)
chr6 (147-200)||(8364582-8364635)
chr6 (97-201)||(26291790-26291892)
chr6 (63-145)||(5080905-5080988)
[»] chr1 (46 HSPs)
chr1 (63-201)||(4001589-4001728)
chr1 (63-201)||(696278-696417)
chr1 (63-201)||(15085943-15086082)
chr1 (63-201)||(32082879-32083018)
chr1 (63-201)||(8671927-8672066)
chr1 (63-201)||(51602065-51602204)
chr1 (63-201)||(1210754-1210893)
chr1 (63-201)||(34792483-34792622)
chr1 (63-200)||(49347527-49347665)
chr1 (63-201)||(30202264-30202403)
chr1 (65-201)||(9592743-9592880)
chr1 (63-201)||(4029131-4029270)
chr1 (63-201)||(22090105-22090244)
chr1 (63-201)||(51440899-51441038)
chr1 (96-201)||(8391781-8391886)
chr1 (63-201)||(32231088-32231227)
chr1 (63-201)||(43240513-43240652)
chr1 (63-192)||(25979365-25979495)
chr1 (63-201)||(38807805-38807944)
chr1 (96-195)||(27847973-27848072)
chr1 (94-201)||(48431572-48431679)
chr1 (96-201)||(39140529-39140634)
chr1 (63-128)||(37311889-37311955)
chr1 (96-201)||(2544608-2544713)
chr1 (96-201)||(9509327-9509432)
chr1 (63-147)||(39318193-39318277)
chr1 (96-201)||(40416380-40416485)
chr1 (133-201)||(32404731-32404799)
chr1 (142-201)||(1661439-1661498)
chr1 (94-201)||(18469248-18469355)
chr1 (142-201)||(43423728-43423787)
chr1 (97-180)||(52561758-52561841)
chr1 (96-201)||(9599562-9599667)
chr1 (96-201)||(35828718-35828823)
chr1 (94-201)||(37463042-37463146)
chr1 (101-201)||(5338733-5338833)
chr1 (131-199)||(44905535-44905603)
chr1 (142-201)||(13827931-13827990)
chr1 (103-194)||(14226004-14226095)
chr1 (110-153)||(27520385-27520428)
chr1 (149-184)||(31274578-31274613)
chr1 (97-199)||(34827273-34827375)
chr1 (144-201)||(7921844-7921901)
chr1 (104-201)||(13827746-13827843)
chr1 (142-195)||(16822236-16822289)
chr1 (142-201)||(52073676-52073736)
[»] chr8 (35 HSPs)
chr8 (63-201)||(42854138-42854277)
chr8 (70-201)||(18125182-18125313)
chr8 (63-201)||(40813333-40813472)
chr8 (63-201)||(36545158-36545297)
chr8 (63-201)||(12491272-12491411)
chr8 (63-201)||(36565375-36565514)
chr8 (99-201)||(39946866-39946968)
chr8 (63-201)||(11523857-11523997)
chr8 (63-201)||(2796566-2796701)
chr8 (63-201)||(36395083-36395223)
chr8 (63-196)||(8932716-8932851)
chr8 (87-195)||(37077768-37077874)
chr8 (65-179)||(21121177-21121292)
chr8 (104-201)||(18752052-18752148)
chr8 (63-152)||(12025847-12025937)
chr8 (96-190)||(26905074-26905168)
chr8 (63-136)||(42469861-42469935)
chr8 (92-201)||(8879608-8879713)
chr8 (114-201)||(6510614-6510701)
chr8 (96-201)||(45419246-45419349)
chr8 (96-165)||(43904833-43904902)
chr8 (142-201)||(12796914-12796973)
chr8 (102-201)||(32043599-32043698)
chr8 (96-201)||(10824332-10824437)
chr8 (142-199)||(35643815-35643872)
chr8 (96-196)||(10080075-10080174)
chr8 (101-201)||(13589495-13589595)
chr8 (143-201)||(9695640-9695698)
chr8 (96-166)||(29520694-29520764)
chr8 (142-196)||(41971992-41972046)
chr8 (142-179)||(9905095-9905132)
chr8 (96-201)||(32930970-32931075)
chr8 (140-201)||(45512707-45512768)
chr8 (149-201)||(41444547-41444599)
chr8 (110-174)||(42584407-42584471)
[»] chr5 (36 HSPs)
chr5 (63-201)||(38684976-38685115)
chr5 (63-201)||(16347512-16347651)
chr5 (63-201)||(3301853-3301992)
chr5 (63-201)||(20456782-20456921)
chr5 (63-201)||(1287713-1287852)
chr5 (63-201)||(4496393-4496532)
chr5 (63-201)||(24178519-24178658)
chr5 (63-200)||(12492518-12492656)
chr5 (96-201)||(1275273-1275378)
chr5 (63-201)||(14665723-14665862)
chr5 (70-201)||(2075615-2075747)
chr5 (63-201)||(28976993-28977132)
chr5 (87-192)||(26884847-26884952)
chr5 (100-200)||(10639314-10639414)
chr5 (117-201)||(34273036-34273120)
chr5 (96-201)||(14749316-14749421)
chr5 (87-200)||(36215508-36215621)
chr5 (112-201)||(31636104-31636193)
chr5 (94-178)||(38501584-38501668)
chr5 (70-152)||(2915636-2915719)
chr5 (96-201)||(43475249-43475354)
chr5 (63-121)||(13561520-13561579)
chr5 (96-201)||(7359428-7359532)
chr5 (63-118)||(14911264-14911320)
chr5 (142-201)||(33667225-33667284)
chr5 (147-201)||(15168801-15168855)
chr5 (96-201)||(1525653-1525758)
chr5 (86-199)||(17340594-17340707)
chr5 (101-201)||(79522-79622)
chr5 (101-201)||(15489665-15489765)
chr5 (94-161)||(27799892-27799959)
chr5 (142-192)||(6889011-6889061)
chr5 (143-201)||(21952366-21952424)
chr5 (142-200)||(28676605-28676663)
chr5 (103-197)||(42199299-42199393)
chr5 (133-201)||(18351112-18351181)
[»] chr3 (38 HSPs)
chr3 (63-201)||(22082-22220)
chr3 (63-201)||(35033155-35033294)
chr3 (63-201)||(47233730-47233869)
chr3 (63-199)||(53519603-53519740)
chr3 (63-201)||(5168841-5168980)
chr3 (63-201)||(38060440-38060579)
chr3 (87-201)||(51447869-51447983)
chr3 (63-201)||(52138809-52138948)
chr3 (64-201)||(25191386-25191524)
chr3 (64-199)||(38850131-38850267)
chr3 (63-201)||(28245446-28245585)
chr3 (63-201)||(54279029-54279168)
chr3 (63-199)||(33272157-33272293)
chr3 (63-201)||(48953555-48953695)
chr3 (101-201)||(43694938-43695038)
chr3 (63-177)||(48508268-48508383)
chr3 (70-201)||(19757909-19758040)
chr3 (63-199)||(45728158-45728298)
chr3 (97-201)||(19737006-19737110)
chr3 (96-194)||(39235154-39235252)
chr3 (63-201)||(3186778-3186916)
chr3 (94-201)||(50960803-50960906)
chr3 (96-201)||(38430857-38430962)
chr3 (101-201)||(27917579-27917679)
chr3 (99-201)||(26490324-26490426)
chr3 (96-201)||(49503722-49503827)
chr3 (103-199)||(48734310-48734406)
chr3 (63-200)||(52678982-52679118)
chr3 (102-201)||(54128387-54128486)
chr3 (101-196)||(45289264-45289359)
chr3 (96-201)||(42510184-42510287)
chr3 (96-201)||(41842679-41842784)
chr3 (65-200)||(54425101-54425244)
chr3 (140-199)||(29600910-29600970)
chr3 (142-201)||(3987056-3987115)
chr3 (65-138)||(19162723-19162797)
chr3 (96-201)||(19676248-19676353)
chr3 (141-197)||(44134043-44134099)
[»] chr4 (53 HSPs)
chr4 (63-201)||(37797861-37797999)
chr4 (63-201)||(31959948-31960087)
chr4 (63-201)||(48174227-48174366)
chr4 (63-201)||(52569649-52569788)
chr4 (64-201)||(27450314-27450452)
chr4 (63-201)||(43433933-43434072)
chr4 (63-201)||(436238-436377)
chr4 (63-201)||(4440862-4441001)
chr4 (63-201)||(56375299-56375438)
chr4 (63-201)||(1777151-1777290)
chr4 (63-201)||(39100670-39100808)
chr4 (63-201)||(53707803-53707942)
chr4 (63-191)||(32479057-32479186)
chr4 (63-198)||(48622677-48622813)
chr4 (63-201)||(33227218-33227357)
chr4 (63-201)||(50286971-50287110)
chr4 (63-201)||(28236192-28236330)
chr4 (63-201)||(46582959-46583097)
chr4 (63-201)||(33190982-33191121)
chr4 (84-201)||(23906453-23906568)
chr4 (63-175)||(27983228-27983341)
chr4 (96-201)||(37773619-37773724)
chr4 (87-199)||(20192044-20192156)
chr4 (87-199)||(20601805-20601917)
chr4 (63-197)||(39708446-39708581)
chr4 (96-186)||(8286455-8286545)
chr4 (87-201)||(26037664-26037778)
chr4 (100-201)||(1793469-1793570)
chr4 (96-199)||(20591469-20591571)
chr4 (63-201)||(47265329-47265475)
chr4 (142-201)||(31459039-31459098)
chr4 (102-180)||(25755347-25755425)
chr4 (63-156)||(50679559-50679652)
chr4 (102-199)||(51421741-51421838)
chr4 (96-201)||(56225075-56225180)
chr4 (94-201)||(20131165-20131272)
chr4 (87-201)||(41009508-41009623)
chr4 (142-201)||(42639234-42639293)
chr4 (94-201)||(1211556-1211665)
chr4 (96-201)||(7092388-7092493)
chr4 (104-201)||(16002936-16003032)
chr4 (148-201)||(44047568-44047621)
chr4 (96-196)||(47611741-47611841)
chr4 (166-201)||(12494759-12494794)
chr4 (142-201)||(26356628-26356687)
chr4 (142-201)||(35555861-35555920)
chr4 (103-197)||(22420889-22420983)
chr4 (142-200)||(42285914-42285972)
chr4 (151-201)||(49987437-49987487)
chr4 (110-199)||(1427466-1427555)
chr4 (101-201)||(50662396-50662497)
chr4 (101-197)||(28497503-28497598)
chr4 (103-179)||(53518495-53518571)
[»] scaffold0570 (1 HSPs)
scaffold0570 (63-201)||(1082-1221)
[»] scaffold0018 (2 HSPs)
scaffold0018 (63-201)||(31477-31616)
scaffold0018 (142-201)||(44082-44141)
[»] scaffold0045 (1 HSPs)
scaffold0045 (87-196)||(86768-86877)
[»] scaffold0024 (1 HSPs)
scaffold0024 (97-201)||(82730-82834)
[»] scaffold0036 (1 HSPs)
scaffold0036 (99-201)||(4442-4544)
[»] scaffold0113 (2 HSPs)
scaffold0113 (142-201)||(11810-11869)
scaffold0113 (96-168)||(11715-11787)
[»] scaffold0171 (1 HSPs)
scaffold0171 (97-196)||(7455-7554)
[»] scaffold0692 (1 HSPs)
scaffold0692 (97-142)||(4704-4749)
[»] scaffold0157 (1 HSPs)
scaffold0157 (166-201)||(25683-25718)
[»] scaffold0325 (1 HSPs)
scaffold0325 (135-201)||(11807-11873)


Alignment Details
Target: chr2 (Bit Score: 114; Significance: 5e-58; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 41197361 - 41197501
Alignment:
Q  63 gttttcttaggtctttctctac--ttttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtcca 160  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41197361 gttttcttaggtctttctctacctttttttaacctgactctcctccatttgatctactcttcttacaacggcatctacggatcttctctctacatgtcca 41197460  T
Q  161 aaccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||||| |||||||||||||||||||||||| ||||||    
T  41197461 aaccatctaagcctattttctaccaacttttctattatagg 41197501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 38430032 - 38429893
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| ||||| |||||||| |||||||||||    
T  38430032 gttttcttaggtcttcctctacttcttttaacctgactctcctccatttgatctactcttcttacaacggcatatacgggtcttctctttacatgtccaa 38429933  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  38429932 accatctaagcctattttctaccaacttttctactatagg 38429893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 41763176 - 41763315
Alignment:
Q  63 gttttcttaggtctttctctac-ttttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||| ||||||||||| ||||||| | |||||||||| |||||||||    
T  41763176 gttttcttaggtcttcctctaccttttttaacctgactctcctccatttgatctacttttcttacaacggcatctacaggtcttctctctgcatgtccaa 41763275  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  41763276 accacctaagcctattttctaccaacttttctactatagg 41763315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 11992242 - 11992381
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| || ||| | |||||||||||||||||||||||||||| |||||||| |||||| ||||||||| ||||||||||| ||||||||    
T  11992242 gttttcttaggtcttcctttacctcttttaacccgactctcctccatttgatccactcttctaacaacggcatctacgggtcttctctctatatgtccaa 11992341  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| || ||||||||||||||||||||||||||||    
T  11992342 accatctaagcttattttctaccaacttttctactatagg 11992381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 12734822 - 12734708
Alignment:
Q  87 ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaa 186  Q
    |||||||| ||||||||||||||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  12734822 ttttaacctgactctcctccatttgatctactcttcttaccacggcatctacgggtcttctctttacatgtccaaaccatctaagcctattttctaccaa 12734723  T
Q  187 cttttctactatagg 201  Q
     ||||||||||||||    
T  12734722 tttttctactatagg 12734708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 2610736 - 2610597
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||||||| ||||    
T  2610736 gttttcataggtcttcctctacctcttttaacttgactctcatccatttgatctactcttcttaccacgacatctacgtgtcttctctctacatgcccaa 2610637  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||| ||||||||    
T  2610636 accatctaagcctattttctaccaacttttccactatagg 2610597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 25834791 - 25834690
Alignment:
Q  100 ctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactata 199  Q
    ||||||||||||||||||||||||||||||| |||| || | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25834791 ctcctccatttgatctactcttcttacaacggcatccacaggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctactata 25834692  T
Q  200 gg 201  Q
    ||    
T  25834691 gg 25834690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 63 - 194
Target Start/End: Complemental strand, 23997762 - 23997630
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||||||||||||  || || | |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||    
T  23997762 gttttcttaggtcttcttccacctcttttaacctgactctcctccatttgatctactcttcttacaacgacatctacgggtcttctttctacatgtcaaa 23997663  T
Q  162 accatctatgcctattttctaccaacttttcta 194  Q
    |||||||| | |||||||||||||| |||||||    
T  23997662 accatctaaggctattttctaccaaattttcta 23997630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 189
Target Start/End: Original strand, 451782 - 451909
Alignment:
Q  63 gttttcttaggtctttctctac-ttttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| |||||||||  ||||||||||||||||||||||||||||||| ||| ||||||||| |||| |||||||||| ||||    
T  451782 gttttcctaggtcttcctctaccttttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtcttttctctacatgcccaa 451881  T
Q  162 accatctatgcctattttctaccaactt 189  Q
    |||||||| |||||||||||||||||||    
T  451882 accatctaagcctattttctaccaactt 451909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 98 - 201
Target Start/End: Complemental strand, 3866184 - 3866081
Alignment:
Q  98 ctctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctacta 197  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||| |||||    
T  3866184 ctctcctccatttgatctactcttcttaccacgacatctacgggtcttctctctacatgcacaaaccatctaagcctattttctaccaacttttttacta 3866085  T
Q  198 tagg 201  Q
    ||||    
T  3866084 tagg 3866081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 45367759 - 45367898
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||  ||||| |||||| | |||||||  |||||||||||||||||||||| ||||| |||||| ||||||||| ||||||||||||||||||||    
T  45367759 gttttcttgagtcttcctctacctcttttaactagactctcctccatttgatctacccttctaacaacggcatctacgggtcttctctctacatgtccaa 45367858  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |  ||||||||||||||||||||||||||||    
T  45367859 accatctaaggttattttctaccaacttttctactatagg 45367898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 24583791 - 24583905
Alignment:
Q  87 ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaa 186  Q
    |||||||  ||||||||||||||||||||||||||||||| ||  ||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||    
T  24583791 ttttaacttgactctcctccatttgatctactcttcttacgacagcatctacgggtcttctctctacatgcccaaaccatctaagcctattttctaccaa 24583890  T
Q  187 cttttctactatagg 201  Q
    |||||||| ||||||    
T  24583891 cttttctattatagg 24583905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 38452820 - 38452957
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  |||| |||||||||||||||| ||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  38452820 gttttcctaggtcttcctctacctcttttaacttgactttcctccatttgatcta-tcttcttaccacggcatctacgggtcttctctctacatgcccaa 38452918  T
Q  162 accatctatgcctattttctaccaacttttctactatag 200  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  38452919 accatctaagcctattttctaccaacttttctactatag 38452957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 8180903 - 8180789
Alignment:
Q  87 ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaa 186  Q
    |||||||  ||||||||||||||||||||||||||||||| ||| |||| || | ||||||||||||||| |||||||||||| || |||||||||||||    
T  8180903 ttttaacttgactctcctccatttgatctactcttcttaccacggcatccacaggtcttctctctacatgcccaaaccatctaagcttattttctaccaa 8180804  T
Q  187 cttttctactatagg 201  Q
    |||||||||||||||    
T  8180803 cttttctactatagg 8180789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 18424511 - 18424649
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| || ||||| |||||| | |||||||| ||||||| |||| |||||||| |||||||||  || ||||||||| || |||||||||||||||||    
T  18424511 gttttcctatgtcttcctctacctcttttaacctgactctcatccaattgatctaatcttcttacgtcggcatctacgggtcgtctctctacatgtccaa 18424610  T
Q  162 accatctatgcctattttctaccaacttttctactatag 200  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  18424611 accatctaagcctattttctaccaacttttctactatag 18424649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 36183599 - 36183460
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||| ||||||||||||||| ||| ||||||||| ||||||||||||||| | ||    
T  36183599 gttttcctaggtcttcctctacctcttttaacttgactctcctccattttatctactcttcttaccacggcatctacgggtcttctctctacatgccgaa 36183500  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||| ||| |  ||||||||||||||||||||||||||||    
T  36183499 accaactaagattattttctaccaacttttctactatagg 36183460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 3243787 - 3243926
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||| | | |||||||  ||||||||||||||||||||| ||||||||| ||| ||||||||| ||||||||||||||  ||||    
T  3243787 gttttcctaggtcttcctctgcctcttttaacttgactctcctccatttgatctattcttcttaccacggcatctacgggtcttctctctacattcccaa 3243886  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||| | |||||||| |||||||||    
T  3243887 accatctaagcctattttccatcaacttttttactatagg 3243926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 4807743 - 4807605
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| ||||||||  ||||| | |||||||  ||||||||| ||||||||||||||||||||| ||||||||||||  ||||||||||| ||| | ||    
T  4807743 gttttcctaggtcttcatctacctcttttaacttgactctccttcatttgatctactcttcttaccacgacatctacgagtcttctctctatatgccgaa 4807644  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    || ||||| ||||| |||||||||||||||||||||||||    
T  4807643 actatctaagccta-tttctaccaacttttctactatagg 4807605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 98 - 189
Target Start/End: Original strand, 6237923 - 6238014
Alignment:
Q  98 ctctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaactt 189  Q
    ||||||||||| ||||||||||||||||| ||||| | ||||| ||| |||||||||||||||||||||||| || | ||||||||||||||    
T  6237923 ctctcctccatctgatctactcttcttacgacgacgtttacgggtctactctctacatgtccaaaccatctaagcatgttttctaccaactt 6238014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 168
Target Start/End: Original strand, 7326294 - 7326400
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| || ||||| |||||| | |||||||  ||||||||| ||||||||||||||||||||| ||| ||||||| | ||||||||||||||| ||||    
T  7326294 gttttcctatgtcttcctctacctcttttaacttgactctccttcatttgatctactcttcttaccacggcatctacaggtcttctctctacatgcccaa 7326393  T
Q  162 accatct 168  Q
    |||||||    
T  7326394 accatct 7326400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 43238298 - 43238366
Alignment:
Q  132 catctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||||| |||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  43238298 catctacgg-tcttctctttacatgcccaaaccatctaagcctattttctaccaacttttctactatagg 43238366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 16097200 - 16097259
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||    
T  16097200 tcttctctctacatgtccaaatcatctaagcctattttctaccaacttttctattatagg 16097259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 64 - 153
Target Start/End: Complemental strand, 39029728 - 39029638
Alignment:
Q  64 ttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctac 153  Q
    |||||||||||||| |||||| | |||| ||| |||| ||||||| |||||||||||||||||||||| ||||||||| ||| ||||||||    
T  39029728 ttttcttaggtcttcctctacctctttttacctgactttcctccaattgatctactcttcttacaacggcatctacgggtctcctctctac 39029638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 43752120 - 43752220
Alignment:
Q  101 tcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatag 200  Q
    |||||||| ||||||||||| | ||| ||   |||||  | ||||||||||||||||||||| || ||| ||||||||||||||| ||||||||||||||    
T  43752120 tcctccatctgatctactctccctactacataatctataggtcttctctctacatgtccaaatcacctaagcctattttctaccaccttttctactatag 43752219  T
Q  201 g 201  Q
    |    
T  43752220 g 43752220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 139
Target Start/End: Complemental strand, 28508826 - 28508749
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacg 139  Q
    |||||| |||||||| |||||| | |||||||  |||||||||||||||||||||||||| |||| ||| ||||||||    
T  28508826 gttttcctaggtcttcctctacatcttttaacttgactctcctccatttgatctactcttattaccacggcatctacg 28508749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 41196189 - 41196226
Alignment:
Q  16 atcatgtgcacccttgtttttaccccggttttacataa 53  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41196189 atcatgtgcacccttgtttttaccccggttttacataa 41196226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 41858799 - 41858744
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctacta 197  Q
    |||||||||||||||||||||||||||| ||| | |||| |||| |||||||||||    
T  41858799 tcttctctctacatgtccaaaccatctaagcccagtttccaccatcttttctacta 41858744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 44437935 - 44437994
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||||||||||| | |||||| ||||| ||| ||||||||| |||||||||||||||    
T  44437935 tcttctctctacatgccgaaaccacctatgtctagtttctaccatcttttctactatagg 44437994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 6219076 - 6218978
Alignment:
Q  101 tcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactata 199  Q
    ||||||||||||||  |||| ||||| ||   ||||||  |||| |||||||||||||||||||| ||| ||||||| || || | |||||||||||||    
T  6219076 tcctccatttgatcacctctccttactacataatctacatatctcctctctacatgtccaaaccacctaagcctattatccactatcttttctactata 6218978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 11017422 - 11017323
Alignment:
Q  102 cctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||||||||||| ||||| || || | |||||||| ||||||||| ||||  ||||||||  || ||| | |||| || | |||||||||||||||    
T  11017422 cctccatttgatctacccttctaactacaaaatctacgggtcttctctccacatacccaaaccacttaagccgagtttccacgatcttttctactatagg 11017323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 190
Target Start/End: Complemental strand, 3481255 - 3481161
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttt 190  Q
    |||| |||||||| ||||||||||| ||| | ||   |||||  | |||||||||||||||||||||||| ||| |||| ||||| |||| ||||    
T  3481255 gactatcctccatctgatctactctccttgctacagaatctataggtcttctctctacatgtccaaaccacctaagcctgttttccaccatcttt 3481161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 12141658 - 12141553
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    |||| ||||| || ||||||||||| ||||| |    |||||| | |||||| ||||| || |||||||| ||| |||| ||||| |||| |||||||||    
T  12141658 gactatcctcaatctgatctactctccttactagagaatctacaggtcttctttctacgtgcccaaaccacctaagcctcttttccaccatcttttctac 12141559  T
Q  196 tatagg 201  Q
    ||||||    
T  12141558 tatagg 12141553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 41330195 - 41330142
Alignment:
Q  144 ttctctctacatgtccaaaccatctatgcctattttctaccaacttttctacta 197  Q
    |||||||||||||| ||||||||||| |||||||||  | || |||||||||||    
T  41330195 ttctctctacatgttcaaaccatctaagcctatttttgatcatcttttctacta 41330142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 13240959 - 13241011
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttcta 194  Q
    ||||||||||||||| |||||||| ||| ||||| |||| |||| ||||||||    
T  13240959 tcttctctctacatgcccaaaccacctaagcctagtttccaccatcttttcta 13241011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 18959025 - 18958916
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatg----tccaaaccatctatgcctattttctaccaactttt 191  Q
    |||| |||||||| ||||||||||| ||||| || | | || | | |||||||||| ||||     |||||||| ||| |||||||||| |||| |||||    
T  18959025 gactatcctccatctgatctactctccttactacaaaagctgcaggtcttctctctgcatgcccaaccaaaccacctaagcctattttccaccatctttt 18958926  T
Q  192 ctactatagg 201  Q
    ||||||||||    
T  18958925 ctactatagg 18958916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 2e-54; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 43281822 - 43281683
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| |||||| | |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  43281822 gttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctactcttcttacaacggcatctacgggtcttctctctacatgtccaa 43281723  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  43281722 accatctaagcctattttctaccaacttttctactatagg 43281683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 12841409 - 12841548
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  12841409 gttttcttaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaa 12841508  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  12841509 accatctaagcctattttctaccaacttttctactatagg 12841548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 29650532 - 29650393
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||||||||| || || ||| | |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  29650532 gttttcttaggttttcctttacctcttttaacctgactctcctccatttgatctactcttcttacaacggcatctacgggtcttctctctacatgtccaa 29650433  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  29650432 accatctaagcctattttctaccaatttttctactatagg 29650393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 97 - 201
Target Start/End: Original strand, 45836649 - 45836753
Alignment:
Q  97 actctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctact 196  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  45836649 actctcctccatttgatctactcttcttacaacggcatctacgggtcttctctctacatgtccaaaccatctaagcctattttctaccaacttttctact 45836748  T
Q  197 atagg 201  Q
    |||||    
T  45836749 atagg 45836753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 44855306 - 44855445
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||||| |||||||  ||||||||||||||||||||||||||||||  ||| ||||||||| ||||||||||||||| ||||    
T  44855306 gttttcctaggtcttcctctacttcttttaacttgactctcctccatttgatctactcttcttatgacggcatctacgggtcttctctctacatgcccaa 44855405  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  44855406 accatctaagcctattttctaccaacttttctactatagg 44855445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 2885856 - 2885995
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| ||||||||  ||||| | |||| ||| ||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||| ||||    
T  2885856 gttttcctaggtcttcttctacctcttttgacctgactctcctccatctgatctactcttcgtacaacggcatctacggatcttctctctacatgcccaa 2885955  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  2885956 accatctaagcctattttctaccaacttttctactatagg 2885995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 31005371 - 31005232
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  31005371 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaa 31005272  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||||  ||||||||||||||||||||||||||||||    
T  31005271 accatctaaacctattttctaccaacttttctactatagg 31005232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 33073100 - 33072961
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  |||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||    
T  33073100 gttttcctaggtcttcctctacctcttttaacttgactcttctccatttgatctactcttcttaccacgacatctacgggtcttctctctacatgcccaa 33073001  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    | |||||| |||||||||||||||||||||||||||||||    
T  33073000 atcatctaagcctattttctaccaacttttctactatagg 33072961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 33349940 - 33350079
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  33349940 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaa 33350039  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  33350040 accatctaagcctattttctagcaacttttctactatagg 33350079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 38607152 - 38607013
Alignment:
Q  63 gttttcttaggtctttctctacttttt-taacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| |||| | | || ||||  |||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||    
T  38607152 gttttcttaggtcttcctctccctcttctaacgtgactctcctccatttgatctactcttctaacaacggcatctacgggtcttctctctacatgtccaa 38607053  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| ||||||||||||||||| |||||||||||||    
T  38607052 accatctaagcctattttctaccaacctttctactatagg 38607013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 37618093 - 37617953
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  37618093 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaa 37617994  T
Q  162 accatctatgccta-ttttctaccaacttttctactatagg 201  Q
    |||||||| ||||| ||||||||||||||||||||||||||    
T  37617993 accatctaagcctatttttctaccaacttttctactatagg 37617953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 13859142 - 13859281
Alignment:
Q  63 gttttcttaggtctttctctacttttt-taacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | || ||||  ||||||||||||||||||||||||||||||| ||  ||||||||| ||||||||||||||| ||||    
T  13859142 gttttcctaggtcttcctctacctcttctaacttgactctcctccatttgatctactcttcttacgacagcatctacgggtcttctctctacatgcccaa 13859241  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  13859242 accatctaagcctattttctaccaacttttctactatagg 13859281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 35906335 - 35906474
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||| |||| |||||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  35906335 gttttcctaggtcttcctctacctcttttaacttgactctcctccatatgatatactcttcttaccacggcatctacgggtcttctctctacatgcccaa 35906434  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  35906435 accatctaagcctattttctaccaacttttctactatagg 35906474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 49029424 - 49029285
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||| || |||||| ||| ||||||||| ||||||||||||||| ||||    
T  49029424 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctattcgtcttaccacggcatctacgggtcttctctctacatgcccaa 49029325  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  49029324 accatctaagcctattttctaccaacttttctactatagg 49029285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 63 - 199
Target Start/End: Original strand, 35559127 - 35559264
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| |||||||||| || ||||||| ||| ||||||||    
T  35559127 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacgacatctaggggtcttctcactaaatgtccaa 35559226  T
Q  162 accatctatgcctattttctaccaacttttctactata 199  Q
    | |||||| |||||||||||||||||||||||||||||    
T  35559227 atcatctaagcctattttctaccaacttttctactata 35559264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 11594108 - 11593969
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| | | ||||||||| ||||||||||||||| ||||    
T  11594108 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccatggcatctacgggtcttctctctacatgcccaa 11594009  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||||  | ||||||||||||||||||||||||||||    
T  11594008 accatctaaccgtattttctaccaacttttctactatagg 11593969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 34869568 - 34869429
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  |||||||| ||||| |||||||||||||||| ||| ||| ||||| ||||||||||||||| ||||    
T  34869568 gttttcctaggtcttcctctacctcttttaacttgactctccaccattggatctactcttcttaccacggcatttacgggtcttctctctacatgcccaa 34869469  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  34869468 accatctaagcctattttctaccaacttttctactatagg 34869429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 46355990 - 46356129
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| ||||| || |||||| | |||||||  ||||||||||||||||||||||||||||||| || |||||||||  ||||||||||||||| ||||    
T  46355990 gttttcctaggttttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacaacatctacgtgtcttctctctacatgcccaa 46356089  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||||  ||||||||||||||||||||||||||||||    
T  46356090 accatctaaacctattttctaccaacttttctactatagg 46356129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 63 - 199
Target Start/End: Original strand, 31682736 - 31682873
Alignment:
Q  63 gttttcttaggtctttctctacttttt-taacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | || ||||  ||||||||||||||||||||||||||||||  ||| ||||||||| ||||||||||||||  ||||    
T  31682736 gttttcctaggtcttcctctacctcttctaacttgactctcctccatttgatctactcttcttatgacggcatctacgggtcttctctctacatacccaa 31682835  T
Q  162 accatctatgcctattttctaccaacttttctactata 199  Q
    |||||||| |||||||||||||||||||||||||||||    
T  31682836 accatctaagcctattttctaccaacttttctactata 31682873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 100 - 201
Target Start/End: Original strand, 39906542 - 39906643
Alignment:
Q  100 ctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactata 199  Q
    ||||||||||||||||||||||||||| |||||||||| || ||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||    
T  39906542 ctcctccatttgatctactcttcttaccacgacatctatgggtcttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactata 39906641  T
Q  200 gg 201  Q
    ||    
T  39906642 gg 39906643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 63 - 198
Target Start/End: Complemental strand, 36652140 - 36652004
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| |||||| | |||||||  |||| ||||| |||||||||||||||||||| ||| ||||||||| |||||||||||||||   ||    
T  36652140 gttttcttaggtcttcctctacctcttttaacttgactatcctctatttgatctactcttcttaccacggcatctacgggtcttctctctacatgctgaa 36652041  T
Q  162 accatctatgcctattttctaccaacttttctactat 198  Q
    |||||||| ||||||||||||||||||||||||||||    
T  36652040 accatctaagcctattttctaccaacttttctactat 36652004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 22349768 - 22349629
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| ||| |||| |||||| | |||||||  ||||||||||||||||||||||||||||||| | ||||  ||||| ||||||||||||||| | ||    
T  22349768 gttttcctagttcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccatgacaattacgggtcttctctctacatgccaaa 22349669  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  22349668 accatctaagcctattttctaccaacttttctactatagg 22349629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 64 - 201
Target Start/End: Complemental strand, 43491455 - 43491317
Alignment:
Q  64 ttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaa 162  Q
    ||||| |||||||| |||||| | |||| ||| ||||||||||||| ||||| ||||||||||| ||| ||||||||| ||||||||||||||| |||||    
T  43491455 ttttcctaggtcttcctctacctcttttgacctgactctcctccatctgatcaactcttcttacgacggcatctacgggtcttctctctacatgcccaaa 43491356  T
Q  163 ccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||| |||||||||||||||| |||| |||||||||    
T  43491355 ccatctaagcctattttctaccaatttttatactatagg 43491317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 36869412 - 36869517
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    |||||||||||||||||||||||||||||   ||  ||||||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  36869412 gactctcctccatttgatctactcttcttctgacagcatctacgggtcttctctctacatgaccaaaccatctaaacctattttctaccaacttttctac 36869511  T
Q  196 tatagg 201  Q
    ||||||    
T  36869512 tatagg 36869517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 63 - 169
Target Start/End: Complemental strand, 32631724 - 32631617
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| |||||| | |||||||| |||| |||||||||||||| |||||||| |||||| ||||||||| ||||||||||||||||||||    
T  32631724 gttttcttaggtcttcctctacctcttttaacctgactatcctccatttgatccactcttctaacaacggcatctacgggtcttctctctacatgtccaa 32631625  T
Q  162 accatcta 169  Q
    ||||||||    
T  32631624 accatcta 32631617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 15682288 - 15682184
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    |||| ||||| |||||||||||||||||||| ||| |||||| ||||||||||||||| || | |||||||||| |||||||| ||||||||||||||||    
T  15682288 gactttcctcaatttgatctactcttcttacgacggcatctatggatcttctctctacctgcctaaaccatctaagcctatttcctaccaacttttctac 15682189  T
Q  196 tatag 200  Q
    |||||    
T  15682188 tatag 15682184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 6375016 - 6374877
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| ||| |||| |||||| | |||||||  || |||||| |||||||||||| |||||||| ||  ||||||| | |||||||||||||||  |||    
T  6375016 gttttcctagatcttcctctacctcttttaacttgattctcctacatttgatctacccttcttaccacagcatctactggtcttctctctacatgctcaa 6374917  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  6374916 accatctaagcctattttctaccaacttttctactatagg 6374877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 98 - 201
Target Start/End: Complemental strand, 7273151 - 7273048
Alignment:
Q  98 ctctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctacta 197  Q
    ||||||||||| ||||||||||||| |||  || ||||||| | |||||||| |||||| |||||||||||| |||||||||||||||||||||||||||    
T  7273151 ctctcctccatctgatctactcttcatacggcggcatctacaggtcttctctgtacatgcccaaaccatctaagcctattttctaccaacttttctacta 7273052  T
Q  198 tagg 201  Q
    ||||    
T  7273051 tagg 7273048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 106 - 201
Target Start/End: Original strand, 46014359 - 46014453
Alignment:
Q  106 catttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||||||||||||||||  ||| |||||| || |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  46014359 catttgatctactcttcttaggacggcatctatgggtcttctctctacatgtccaa-ccatctaagcctattttctaccaacttttctactatagg 46014453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 87 - 199
Target Start/End: Complemental strand, 23404540 - 23404429
Alignment:
Q  87 ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaa 186  Q
    |||| ||| ||||||||||||||||||||||||||||||  ||||||||||||  |||||  |||||||| ||||||  |||| ||||||||||| ||||    
T  23404540 ttttgacctgactctcctccatttgatctactcttcttatgacgacatctacgagtcttcaatctacatg-ccaaactgtctaagcctattttctcccaa 23404442  T
Q  187 cttttctactata 199  Q
    |||||||||||||    
T  23404441 cttttctactata 23404429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 64 - 152
Target Start/End: Original strand, 24598322 - 24598411
Alignment:
Q  64 ttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctcta 152  Q
    |||||||||||||| |||||| | |||||||| ||||| ||| ||||||||||||||||||||||||| ||||||||| ||| |||||||    
T  24598322 ttttcttaggtcttcctctacctcttttaacctgactcaccttcatttgatctactcttcttacaacggcatctacgggtctgctctcta 24598411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 40169758 - 40169660
Alignment:
Q  101 tcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactata 199  Q
    |||||||||||||||||||| |||   || | |||||||  |||| |||||||||| |||||||| ||| |||||||||| |||| |||||||||||||    
T  40169758 tcctccatttgatctactctccttcacacaaaatctacgtgtcttatctctacatgcccaaaccacctaagcctattttccaccatcttttctactata 40169660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 36136878 - 36136773
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    ||||||||||||| |||||| |||||| ||| || |||||||  | | ||||||||| ||| |||||| | ||| | ||||||||||||| |||||||||    
T  36136878 gactctcctccatctgatctgctcttcgtactacaacatctataggtattctctctatatgcccaaacaacctaagactattttctaccatcttttctac 36136779  T
Q  196 tatagg 201  Q
    ||||||    
T  36136778 tatagg 36136773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 7189388 - 7189499
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgac------atctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaactt 189  Q
    ||||||||||||| ||||||||||||| ||| || ||      |||||  ||| ||||||||||||| |||||||| ||| || |||||||||||| |||    
T  7189388 gactctcctccatctgatctactcttcatactacaactacaacatctatcgattttctctctacatgcccaaaccacctaagcttattttctaccatctt 7189487  T
Q  190 ttctactatagg 201  Q
    ||||||||||||    
T  7189488 ttctactatagg 7189499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 19262609 - 19262706
Alignment:
Q  103 ctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||| ||||||||||||||||| || | |||||| | |||||||||||||||  ||||||| ||| ||| | ||||||||| ||||||||| |||||    
T  19262609 ctccatctgatctactcttcttactacaa-atctacaggtcttctctctacatgctcaaaccacctaagccaagtttctaccatcttttctacaatagg 19262706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 96 - 192
Target Start/End: Original strand, 38135381 - 38135476
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttc 192  Q
    |||| |||||||| ||||||| ||| ||||| || | |||||| | |||||| ||||||||||||||||| ||| |||||||||| |||| ||||||    
T  38135381 gactatcctccatctgatcta-tctccttactacaaaatctactggtcttctgtctacatgtccaaaccacctaagcctattttccaccatcttttc 38135476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 27021906 - 27021965
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||||||||||| |||||||| ||| ||||| |||  ||||||||||||||||||||    
T  27021906 tcttctctctacatgcccaaaccacctaagcctagttttcaccaacttttctactatagg 27021965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 47848742 - 47848683
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||||| ||||| |||||||| ||| |||||||||| |||| |||||||||||||||    
T  47848742 tcttctctcgacatgcccaaaccacctaagcctattttccaccatcttttctactatagg 47848683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 156
Target Start/End: Complemental strand, 7273248 - 7273154
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatg 156  Q
    |||||| |||||||| |||||| | |||| ||| |||||||||||||   ||||||||| | ||| ||| || ||||||||||||||||||||||    
T  7273248 gttttcataggtcttcctctacctcttttgacctgactctcctccatccaatctactctacatacgacggcacctacggatcttctctctacatg 7273154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 201
Target Start/End: Original strand, 8492405 - 8492506
Alignment:
Q  100 ctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactata 199  Q
    ||||||||| ||||||||||||  ||| || ||||||||   |||| |||||||| || ||||||| ||  ||||||||||||||| | ||| |||||||    
T  8492405 ctcctccatctgatctactctttgtactacaacatctacaagtcttttctctacaagttcaaaccaccttagcctattttctaccatcatttttactata 8492504  T
Q  200 gg 201  Q
    ||    
T  8492505 gg 8492506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 201
Target Start/End: Complemental strand, 12966123 - 12966031
Alignment:
Q  109 ttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||||||| ||||| ||   || ||||| ||||||||||||||| |||||||| ||| || || |||| |||| ||||||| |||||||    
T  12966123 ttgatctactctccttactacagaatttacgggtcttctctctacatgcccaaaccacctaagcatagtttccaccatcttttcttctatagg 12966031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 36514424 - 36514480
Alignment:
Q  145 tctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||||||| |||||||| ||| | ||| ||||||||| |||||||||||||||    
T  36514424 tctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactatagg 36514480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 201
Target Start/End: Original strand, 26742078 - 26742169
Alignment:
Q  110 tgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||||||| ||||| || | |||||  | || | ||||||||||| ||||||| |||  ||||||||| |||| |||||||||||||||    
T  26742078 tgatctactctccttaccacaaaatctataggtcgtttctctacatgttcaaaccacctaatcctattttccaccatcttttctactatagg 26742169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 198
Target Start/End: Original strand, 25579245 - 25579347
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    |||| |||||||| | ||||||||||||||| ||   ||||||   ||||||||||||||  |||||||| ||| |||||||||| ||||  |||||| |    
T  25579245 gactatcctccatctaatctactcttcttaccacagaatctacatgtcttctctctacatccccaaaccacctaagcctattttccaccattttttctgc 25579344  T
Q  196 tat 198  Q
    |||    
T  25579345 tat 25579347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 27893724 - 27893821
Alignment:
Q  101 tcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatag 200  Q
    |||||||| ||||||||||| || |  || | |||||| ||||||   ||||||||| ||||||| ||| |||||||||| |||| || |||||||||||    
T  27893724 tcctccatctgatctactctcctaagtacaaaatctacagatctt---tctacatgttcaaaccacctaagcctattttccaccatctattctactatag 27893820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 201
Target Start/End: Complemental strand, 32630633 - 32630603
Alignment:
Q  171 gcctattttctaccaacttttctactatagg 201  Q
    |||||||||||||||||||||||||||||||    
T  32630633 gcctattttctaccaacttttctactatagg 32630603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 158
Target Start/End: Complemental strand, 33139267 - 33139206
Alignment:
Q  97 actctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtc 158  Q
    ||||| |||||| || | |||| ||||||||||| ||||| ||| |||||||||||||||||    
T  33139267 actcttctccatctgttatacttttcttacaacggcatctgcgggtcttctctctacatgtc 33139206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 35713763 - 35713706
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactata 199  Q
    ||||||||||||||| |||||||| ||| |||||||||| ||||  ||||| ||||||    
T  35713763 tcttctctctacatgcccaaaccacctaagcctattttccaccattttttcaactata 35713706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 200
Target Start/End: Original strand, 47796359 - 47796408
Alignment:
Q  151 tacatgtccaaaccatctatgcctattttctaccaacttttctactatag 200  Q
    |||||| |||||||| ||| |||||||||| |||| ||||||||||||||    
T  47796359 tacatgcccaaaccacctacgcctattttcaaccaccttttctactatag 47796408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 38920859 - 38920803
Alignment:
Q  145 tctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||||||| ||||||||  || ||||| |||| |||| |||||||||||||||    
T  38920859 tctctctacatgcccaaaccacttaagcctagtttccaccatcttttctactatagg 38920803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 5e-52; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 5258282 - 5258421
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||||||||||||||||||| | |||||||  |||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  5258282 gttttcttaggtctttctctacctcttttaacatgactctcctccatttgatctactcttcttacaacggaatctacgggtcttctctctacatgtccaa 5258381  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  5258382 accatctaagcctattttctaccaacttttctactatagg 5258421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 32756069 - 32755930
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| ||||||||||||||| | |||||||  ||||||||||||||||||||||||||||||  ||||||||| ||| ||||| ||||||||| ||||    
T  32756069 gttttcctaggtctttctctacctcttttaacttgactctcctccatttgatctactcttcttattacgacatcttcgggtcttccctctacatgaccaa 32755970  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  32755969 accatctaagcctattttctaccaacttttctactatagg 32755930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 63 - 199
Target Start/End: Original strand, 10099993 - 10100130
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||| | ||||||||| ||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  10099993 gttttcctaggtcttcctctacctcttttaaactgactctccttcatttgatctactcttcttacaacggcatctacgagtcttctctctacatgtccaa 10100092  T
Q  162 accatctatgcctattttctaccaacttttctactata 199  Q
    |||||||| || ||||||||||||||||||||||||||    
T  10100093 accatctaagcttattttctaccaacttttctactata 10100130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 30031404 - 30031265
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||  |||||| | |||||||| ||||||||||||||||||||||||||||||| ||| |||||| || ||||||||||||||||||||    
T  30031404 gttttcctaggtctccctctacctcttttaacctgactctcctccatttgatctactcttcttacgacggcatctatgggtcttctctctacatgtccaa 30031305  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
      |||||| |||||||||||||||||||||||||||||||    
T  30031304 ctcatctaagcctattttctaccaacttttctactatagg 30031265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 35043575 - 35043714
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||||||||||||  ||||||| |||||||| ||||||| ||||||||||||||| ||||||||||| ||||||||| | ||||||||||||||||||    
T  35043575 gttttcttaggtcttcatctacttcttttaacctgactctcgtccatttgatctacttttcttacaacggcatctacgggtattctctctacatgtccaa 35043674  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    || ||||| |||||||||| ||||||||||||||| ||||    
T  35043675 acaatctaagcctattttcaaccaacttttctactttagg 35043714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 608280 - 608166
Alignment:
Q  87 ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaa 186  Q
    |||||| | ||||||||||||||||||| ||||||||||||| | ||||||| | |||||||||||||||||||||||||||| |||||||||||| |||    
T  608280 ttttaatctgactctcctccatttgatccactcttcttacaaaggcatctacaggtcttctctctacatgtccaaaccatctaagcctattttctatcaa 608181  T
Q  187 cttttctactatagg 201  Q
    |||||||||||||||    
T  608180 cttttctactatagg 608166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 5631945 - 5631831
Alignment:
Q  87 ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaa 186  Q
    |||||| | ||||||||||||||||||||||| ||||||| | | ||||||||| |||||||||||||||||||||||||||| || |||||||||||||    
T  5631945 ttttaatctgactctcctccatttgatctactattcttacgaaggcatctacgggtcttctctctacatgtccaaaccatctaagcatattttctaccaa 5631846  T
Q  187 cttttctactatagg 201  Q
    |||||||||||||||    
T  5631845 cttttctactatagg 5631831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 20427770 - 20427909
Alignment:
Q  63 gttttcttaggtctttctctacttttt-taacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| ||| || | || ||||| ||||| |||| ||||||| |||||||||||||||| ||||||||| |||||||| |||| || |||    
T  20427770 gttttcttaggtcttcctcaacctcttgtaacctgactcccctctatttgatttactcttcttacaacggcatctacgggtcttctctatacacgttcaa 20427869  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  20427870 accatctaagcctattttctaccaacttttctactatagg 20427909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 28085524 - 28085385
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  |||||| |||||||||||||||||||||||| ||   || ||||| ||||||||||||||| ||||    
T  28085524 gttttcctaggtcttcctctacctcttttaacttgactctactccatttgatctactcttcttaccactttatttacgggtcttctctctacatggccaa 28085425  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  28085424 accatctaagcctattttctaccaacttttctactatagg 28085385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 64 - 201
Target Start/End: Complemental strand, 14030954 - 14030816
Alignment:
Q  64 ttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaa 162  Q
    |||||||||||||| |||||| | |||||| |||||||||| | |||||||||||||||||||||||| ||| |||   |||||||| ||||||||||||    
T  14030954 ttttcttaggtcttcctctacctcttttaatccgactctccactatttgatctactcttcttacaacggcatttacatgtcttctctatacatgtccaaa 14030855  T
Q  163 ccatctatgcctattttctaccaacttttctactatagg 201  Q
    |||| || ||||||| |||||||||||||||||||||||    
T  14030854 ccatttaagcctattatctaccaacttttctactatagg 14030816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 21351971 - 21352110
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| |||||| | |||||||| |||||| ||||||||| |||| |||||| |||| | |||| || | ||||||||||||||||||||    
T  21351971 gttttcttaggtcttcctctacctcttttaacctgactcttctccatttgttctattcttctaacaatggcatcgacaggtcttctctctacatgtccaa 21352070  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    | |||||| |||||||||||||||| ||||||||||||||    
T  21352071 atcatctaagcctattttctaccaatttttctactatagg 21352110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 30679520 - 30679417
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    |||||| |||||||||||||||| ||||||| ||||||||||||| ||| ||||||||||| ||||| |||||| |||||||||||||||||||||||||    
T  30679520 gactctactccatttgatctactattcttacgacgacatctacgggtctcctctctacatgcccaaatcatctaagcctattttctaccaacttttctac 30679421  T
Q  196 tata 199  Q
    ||||    
T  30679420 tata 30679417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 96 - 197
Target Start/End: Original strand, 9593874 - 9593975
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    ||||||||||||| ||||||||||||||||| ||  |||||||   ||||||||||||||| |||||||| ||| ||||||||||||||| |||||||||    
T  9593874 gactctcctccatctgatctactcttcttactacagcatctacatgtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctac 9593973  T
Q  196 ta 197  Q
    ||    
T  9593974 ta 9593975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 9706893 - 9706785
Alignment:
Q  87 ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaa 186  Q
    |||||||| |||||| ||||||||||||||||||||| |||||| | |||| || |||||||||||      ||||||||||| ||||||||||||||||    
T  9706893 ttttaacctgactcttctccatttgatctactcttctaacaacggcttctatgggtcttctctcta------caaaccatctaagcctattttctaccaa 9706800  T
Q  187 cttttctactatagg 201  Q
    ||||||||| |||||    
T  9706799 cttttctacaatagg 9706785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 7133887 - 7133795
Alignment:
Q  70 taggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||||||||| ||||    
T  7133887 taggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatcttcgggtcttctctctacatgcccaa 7133795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 7136810 - 7136718
Alignment:
Q  70 taggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||||||||| ||||    
T  7136810 taggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatcttcgggtcttctctctacatgcccaa 7136718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 33497071 - 33496970
Alignment:
Q  100 ctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgccta-ttttctaccaacttttctactat 198  Q
    ||||| |||||||||| |||||||||| ||  | | ||||| |||||||||||||||||||||||||||| ||||| |||||||| ||||||||||| ||    
T  33497071 ctccttcatttgatcttctcttcttacgacagcgtttacgg-tcttctctctacatgtccaaaccatctaagcctatttttctactaacttttctaccat 33496973  T
Q  199 agg 201  Q
    |||    
T  33496972 agg 33496970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 2689754 - 2689649
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    |||||| ||| || ||||||||||||||||  ||| |||||||   |||||||||||||||  |||| |||||| ||||||||||||| |||||||| ||    
T  2689754 gactctactctatctgatctactcttcttatgacggcatctacatgtcttctctctacatgctcaaatcatctaagcctattttctacaaacttttcaac 2689655  T
Q  196 tatagg 201  Q
    ||||||    
T  2689654 tatagg 2689649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 24665887 - 24665819
Alignment:
Q  133 atctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||| | |||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||    
T  24665887 atctacaggtcttctctctacatgtccaaaccacctaagcctattttctaccatattttctactatagg 24665819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 28026961 - 28027099
Alignment:
Q  63 gttttcttaggtctttctctacttttt-taacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||| ||||||||| |||||| | || ||| | ||||||||||||| |||| |||||||| ||| ||  ||||||| | | || |||||||||||||||    
T  28026961 gtttttttaggtcttcctctacctcttctaatctgactctcctccatctgatatactcttcgtactaccgcatctacaggtgttatctctacatgtccaa 28027060  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||| | | |||||||||||||||  ||||||||||||||    
T  28027061 acca-ccaagcctattttctaccacattttctactatagg 28027099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 201
Target Start/End: Complemental strand, 12890688 - 12890593
Alignment:
Q  97 actctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctact 196  Q
    |||||||||||| ||||||||||||||||| ||| |||||| || |         ||||| ||||||||| || ||||||||||||||||||||||||||    
T  12890688 actctcctccatctgatctactcttcttacgacggcatctatgggt---------acatgcccaaaccatgtaagcctattttctaccaacttttctact 12890598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 8364635 - 8364582
Alignment:
Q  147 tctctacatgtccaaaccatctatgcctattttctaccaacttttctactatag 200  Q
    |||||||||| |||||||| ||| |||||||||| |||| ||||||||||||||    
T  8364635 tctctacatgcccaaaccacctaagcctattttcaaccaccttttctactatag 8364582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 201
Target Start/End: Complemental strand, 26291892 - 26291790
Alignment:
Q  97 actctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctact 196  Q
    |||||||||||| |||||||||| ||||||  | |||||||    |||||||||||||||  ||||||| ||| | |||||||||||||  ||||||| |    
T  26291892 actctcctccatctgatctactcatcttactgcaacatctataagtcttctctctacatg--caaaccacctaagtctattttctaccatattttctatt 26291795  T
Q  197 atagg 201  Q
    |||||    
T  26291794 atagg 26291790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 145
Target Start/End: Complemental strand, 5080988 - 5080905
Alignment:
Q  63 gttttcttaggtctttctcta-cttttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatctt 145  Q
    |||||| ||||||||  |||| || |||||||  |||||||||||||||||| |||||||||||| ||  ||||||||| ||||    
T  5080988 gttttcctaggtcttcatctatctcttttaacgagactctcctccatttgatttactcttcttacgacagcatctacgggtctt 5080905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 5e-52; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 4001589 - 4001728
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| |||||| | |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||    
T  4001589 gttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctactcttcttacaacggcatctacgggtctcctctctacatgtccaa 4001688  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  4001689 accatctaagcctattttctaccaacttttctactatagg 4001728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 696417 - 696278
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| |||||| | |||||||| ||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  696417 gttttcttaggtcttcctctacctcttttaacctgactctcctccatatgatctactcttcttacaacggcatctacgggtcttctctctacatgtccaa 696318  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
     ||||||| |||||||||||||||||||||||||||||||    
T  696317 gccatctaagcctattttctaccaacttttctactatagg 696278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 15086082 - 15085943
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| |||||| | |||||| | |||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||    
T  15086082 gttttcttaggtcttcctctacctcttttaatctgactctcctccatttgatctactcttctaacaacggcatctacgggtcttctctctacatgtccaa 15085983  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  15085982 accatctaagcctattttctaccaacttttctactatagg 15085943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 32082879 - 32083018
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| |||||| | |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||| |||||||||    
T  32082879 gttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctactcttcttacaacggcatctacgggtctcctctctgcatgtccaa 32082978  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  32082979 accatctaagcctattttctaccaacttttctactatagg 32083018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 8672066 - 8671927
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  8672066 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacggatcttctctctacatgcccaa 8671967  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  8671966 accatctaagcctattttctaccaacttttctactatagg 8671927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 51602204 - 51602065
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||    
T  51602204 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacgacatctacgggtcttctctctacatgcccaa 51602105  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  51602104 accatctaagcctattttctaccaacttttctactatagg 51602065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 1210893 - 1210754
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  1210893 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaa 1210794  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  1210793 accatctaagcctattttctaccaacttttctactatagg 1210754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 34792483 - 34792622
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  34792483 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaa 34792582  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| ||||| |||||||||||||||||||||||||    
T  34792583 accatctaagcctactttctaccaacttttctactatagg 34792622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 49347527 - 49347665
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||| |||| ||||    
T  49347527 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtcttctctctgcatgaccaa 49347626  T
Q  162 accatctatgcctattttctaccaacttttctactatag 200  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  49347627 accatctaagcctattttctaccaacttttctactatag 49347665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 30202264 - 30202403
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||| ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  30202264 gttttcctaggtcttcctctacctcttttaacttgactctcgtccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgaccaa 30202363  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| ||||||||||||||||| |||||||||||||    
T  30202364 accatctaagcctattttctaccaacctttctactatagg 30202403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 65 - 201
Target Start/End: Complemental strand, 9592880 - 9592743
Alignment:
Q  65 tttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaac 163  Q
    |||| |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| |||| |    
T  9592880 tttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaacc 9592781  T
Q  164 catctatgcctattttctaccaacttttctactatagg 201  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  9592780 catctaagcctattttctacaaacttttctactatagg 9592743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 4029270 - 4029131
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||| ||||||||| ||| ||||||||| ||||||||||||||||||||    
T  4029270 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctattcttcttaccacggcatctacgggtcttctctctacatgtccaa 4029171  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    ||| |||| ||||||||||||||||||| |||||| ||||    
T  4029170 accttctaagcctattttctaccaacttgtctactctagg 4029131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 22090244 - 22090105
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| ||||||   |||||||  ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||| ||||||| ||||    
T  22090244 gttttcctaggtcttcctctaccccttttaacttgactctcctccatttgatctacttttcttaccacggcatctacgggtcttctccctacatgcccaa 22090145  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  22090144 accatctaagcctattttctaccaacttttctactatagg 22090105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 51440899 - 51441038
Alignment:
Q  63 gttttcttaggtctttctctacttt-tttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| |  ||||||  |||||||||||||||| |||||||||||||| ||| ||||| ||| ||||||||||||||| ||||    
T  51440899 gttttcctaggtcttcctctacctcctttaacttgactctcctccatttgctctactcttcttaccacggcatctccgggtcttctctctacatgcccaa 51440998  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  51440999 accatctaagcctattttctaccaacttttctactatagg 51441038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 8391886 - 8391781
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||| |||||  ||||||||||||||||||||||||    
T  8391886 gactctccttcatttgatctactcttcttacaacggcatctacgggtctcctctctacatgtccaaacaatctaaacctattttctaccaacttttctac 8391787  T
Q  196 tatagg 201  Q
    ||||||    
T  8391786 tatagg 8391781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 32231088 - 32231227
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||  ||| |||||||   ||||||||||||||| ||||    
T  32231088 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttatgacggcatctacaagtcttctctctacatgcccaa 32231187  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  32231188 accatctaagcctattttctaccaatttttctactatagg 32231227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 43240513 - 43240652
Alignment:
Q  63 gttttcttaggtctttctctac-ttttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| |||||||||   |||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||  |||    
T  43240513 gttttcctaggtcttcctctaccttttttaacttaactctcctccatttgatctactcttcttaccacaacatctacgggtcttctctctacatgctcaa 43240612  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    || ||||| |||||||||||| ||| ||||||||||||||    
T  43240613 actatctaagcctattttctatcaatttttctactatagg 43240652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 63 - 192
Target Start/End: Original strand, 25979365 - 25979495
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| | |||||| |||||| | |||||||| |||||||||||||| |||||||||| ||||||||  ||||||||| ||||||||||||||||||||    
T  25979365 gttttcatgggtcttcctctacctcttttaacctgactctcctccattcgatctactctccttacaacagcatctacgggtcttctctctacatgtccaa 25979464  T
Q  162 accatctatgcctattttctaccaacttttc 192  Q
    |||||||| ||||| ||||||| ||||||||    
T  25979465 accatctaagcctagtttctactaacttttc 25979495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 38807805 - 38807944
Alignment:
Q  63 gttttcttaggtctttctcta-cttttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| | ||| || |||| | | ||||||||||||| || |||||||||||||| ||| |||||| || |||||||| |||||| | ||    
T  38807805 gttttcttaggtcttcccctagctcttttgatctgactctcctccatctggtctactcttcttacgacggcatctaagggtcttctctttacatgcctaa 38807904  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  38807905 accatctaagtctattttctaccaacttttctactatagg 38807944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 96 - 195
Target Start/End: Original strand, 27847973 - 27848072
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    ||||||||||||| |||| |||||||| ||| ||  ||||||| | |||||||||| |||| |||||||| ||| || |||||||||||| |||||||||    
T  27847973 gactctcctccatctgatatactcttcatactacagcatctacaggtcttctctctgcatgcccaaaccacctaagcttattttctaccatcttttctac 27848072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 94 - 201
Target Start/End: Original strand, 48431572 - 48431679
Alignment:
Q  94 ccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttct 193  Q
    |||||| |||||||| ||||| |||||  |||| || | ||||||   ||||||||||||||| |||||||| ||| |||||||||| |||| |||||||    
T  48431572 ccgactatcctccatctgatcaactctctttactacaaaatctacaagtcttctctctacatgcccaaaccacctaagcctattttccaccatcttttct 48431671  T
Q  194 actatagg 201  Q
    ||||||||    
T  48431672 actatagg 48431679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 39140634 - 39140529
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    ||||||| ||||| ||||||||||||| ||| || |||| ||  | ||||||||||||||| |||||||| ||| ||| ||||| | ||| |||||||||    
T  39140634 gactctcatccatctgatctactcttcgtactacaacatgtatcggtcttctctctacatgcccaaaccacctaagccaattttttgccatcttttctac 39140535  T
Q  196 tatagg 201  Q
    ||||||    
T  39140534 tatagg 39140529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 37311889 - 37311955
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaa 128  Q
    |||||| |||||||  |||||| | |||||||| |||||||||||||||||||||||||||||||||    
T  37311889 gttttcctaggtctacctctacctcttttaacctgactctcctccatttgatctactcttcttacaa 37311955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 2544713 - 2544608
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    |||| |||||||| ||||||||||| ||||| |    |||||  | |||||||||||||||||||||||| ||| | || ||||| |||| |||||||||    
T  2544713 gactatcctccatctgatctactctccttactatagaatctataggtcttctctctacatgtccaaaccacctaagtctgttttccaccatcttttctac 2544614  T
Q  196 tatagg 201  Q
    ||||||    
T  2544613 tatagg 2544608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 9509432 - 9509327
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    ||||||||||||| |||||||||||   ||| |   ||| ||| | ||||||||||||||| |||||| | ||| ||||||||| ||||| |||||||||    
T  9509432 gactctcctccatctgatctactctaagtactaaagcatataccggtcttctctctacatgcccaaactacctaagcctattttttaccatcttttctac 9509333  T
Q  196 tatagg 201  Q
    ||||||    
T  9509332 tatagg 9509327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 147
Target Start/End: Complemental strand, 39318277 - 39318193
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttct 147  Q
    |||||| |||||||| |||||| | |||| ||||||||||||||||| |||||| |||||||||| ||| ||||||||| ||||||    
T  39318277 gttttcctaggtcttcctctacctcttttgacccgactctcctccatctgatctgctcttcttacgacg-catctacgggtcttct 39318193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 40416485 - 40416380
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    |||| |||| ||| ||||||||||| ||||| || | |||||| | ||||||||||||||| | |||||| ||| ||||  |||| |||| |||||||||    
T  40416485 gactatcctgcatctgatctactctccttactacaaaatctacagttcttctctctacatgcctaaaccacctaagcctcgtttccaccatcttttctac 40416386  T
Q  196 tatagg 201  Q
    ||||||    
T  40416385 tatagg 40416380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 32404731 - 32404799
Alignment:
Q  133 atctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||| | |||||||||||||| ||||||||| ||| |||||||||| |||| ||||| |||||||||    
T  32404731 atctacaggtcttctctctacatatccaaaccacctaagcctattttccaccatcttttttactatagg 32404799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 1661498 - 1661439
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||||||||||  ||||||||||  |||||||||| |||| |||||||||||||||    
T  1661498 tcttctctctacatgctcaaaccatctgagcctattttccaccatcttttctactatagg 1661439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 201
Target Start/End: Original strand, 18469248 - 18469355
Alignment:
Q  94 ccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttct 193  Q
    |||||||| |||||| |||| |||||||| ||| || ||||||||   ||||||| ||| |||||||||| | |||  ||||||||||| || ||| |||    
T  18469248 ccgactcttctccatctgatttactcttcgtactacaacatctaccagtcttctcactatatgtccaaactacctaatcctattttctatcatcttctct 18469347  T
Q  194 actatagg 201  Q
    ||||||||    
T  18469348 actatagg 18469355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 43423787 - 43423728
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||||||||||| |||||||| ||| ||||| |||| |||| |||||||||||||||    
T  43423787 tcttctctctacatggccaaaccacctaagcctagtttccaccatcttttctactatagg 43423728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 180
Target Start/End: Original strand, 52561758 - 52561841
Alignment:
Q  97 actctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttc 180  Q
    |||||||||||| ||||||||||||| |||  | |||||||  | ||||||||||||||| | |||||| ||| ||||||||||    
T  52561758 actctcctccatctgatctactcttcgtactgcaacatctatcggtcttctctctacatgccgaaaccacctaagcctattttc 52561841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 9599562 - 9599667
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    ||||||||||||| ||||||||||||  ||| |  |||||| | | || ||| | || ||| || ||||| ||| ||||||||||||||| |||||||||    
T  9599562 gactctcctccatctgatctactctttgtactataacatctgcaggtcatctatttatatgcccgaaccacctaagcctattttctaccatcttttctac 9599661  T
Q  196 tatagg 201  Q
    ||||||    
T  9599662 tatagg 9599667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 35828718 - 35828823
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    |||| |||||||| |||||| |||| ||||| ||   |||||  | ||||||||||||| |||||||||| |||  ||||||||| |||| |||||||||    
T  35828718 gactatcctccatatgatcttctctccttactacataatctataggtcttctctctacacgtccaaaccacctaaccctattttccaccatcttttctac 35828817  T
Q  196 tatagg 201  Q
     |||||    
T  35828818 catagg 35828823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 201
Target Start/End: Original strand, 37463042 - 37463146
Alignment:
Q  94 ccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttct 193  Q
    ||||||||||||||| ||||||||||||| ||| ||| |||||||   ||| |||| ||   | |||||||| ||| |||||||||||||   |||||||    
T  37463042 ccgactctcctccatctgatctactcttcgtactacggcatctacatgtctactctata---gcccaaaccacctaagcctattttctactgtcttttct 37463138  T
Q  194 actatagg 201  Q
    ||||||||    
T  37463139 actatagg 37463146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 5338833 - 5338733
Alignment:
Q  101 tcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatag 200  Q
    |||||||| ||||||||||| ||||| |   ||||||| | |||||||||| |||| |||||||| ||| ||  | |||| |||| ||||||||||||||    
T  5338833 tcctccatctgatctactctccttactaaagcatctacaggtcttctctctgcatgcccaaaccacctaagctcagtttccaccatcttttctactatag 5338734  T
Q  201 g 201  Q
    |    
T  5338733 g 5338733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 44905535 - 44905603
Alignment:
Q  131 acatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactata 199  Q
    |||||||  ||| |||||| ||||||||||||||| ||| || |||||||||||  |||||||||||||    
T  44905535 acatctatagattttctctttacatgtccaaaccacctaagcatattttctaccgtcttttctactata 44905603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 13827931 - 13827990
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||||||||||| ||||||| |||  |||| |||| |||| |||||||||||||||    
T  13827931 tcttctctctacatgttcaaaccacctaaccctagtttccaccatcttttctactatagg 13827990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 14226004 - 14226095
Alignment:
Q  103 ctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttcta 194  Q
    |||||| ||||||||||| ||||| || | |||||| |   | ||||||||||| |||||||| ||| |||||||||| |||| ||||||||    
T  14226004 ctccatgtgatctactctccttactacaaaatctacaggaatcctctctacatgcccaaaccacctaagcctattttccaccatcttttcta 14226095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 153
Target Start/End: Original strand, 27520385 - 27520428
Alignment:
Q  110 tgatctactcttcttacaacgacatctacggatcttctctctac 153  Q
    |||||||||||||||||||||||||||||   ||||||||||||    
T  27520385 tgatctactcttcttacaacgacatctacatgtcttctctctac 27520428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 184
Target Start/End: Original strand, 31274578 - 31274613
Alignment:
Q  149 tctacatgtccaaaccatctatgcctattttctacc 184  Q
    ||||||||||||||||||||| ||||||||||||||    
T  31274578 tctacatgtccaaaccatctaagcctattttctacc 31274613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 199
Target Start/End: Original strand, 34827273 - 34827375
Alignment:
Q  97 actctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctact 196  Q
    |||||||||||| | ||||||| ||||||| |   ||||||  | |||||||| |||||||||||||||   | ||||||||||||||| |||| || ||    
T  34827273 actctcctccatctaatctacttttcttactagagcatctatcggtcttctctttacatgtccaaaccaaagaagcctattttctaccatctttacttct 34827372  T
Q  197 ata 199  Q
    |||    
T  34827373 ata 34827375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 7921901 - 7921844
Alignment:
Q  144 ttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||||||||||||||||||  ||  |||| |||| |||| |||||||||||||||    
T  7921901 ttctctctacatgtccaaaccacataaacctagtttccaccatcttttctactatagg 7921844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 104 - 201
Target Start/End: Original strand, 13827746 - 13827843
Alignment:
Q  104 tccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||| ||||||||||| ||||| ||   ||||||   |||||||||||||||||||||||| ||   |||| |||| |||  |||||||||||||||    
T  13827746 tccatatgatctactctccttactacagaatctacacttcttctctctacatgtccaaaccaccttaccctagtttccaccgtcttttctactatagg 13827843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 16822236 - 16822289
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    |||||||||||||||||||||||| ||| ||| | ||||||||| ||| |||||    
T  16822236 tcttctctctacatgtccaaaccacctaagccgagtttctaccatcttgtctac 16822289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 52073676 - 52073736
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgccta-ttttctaccaacttttctactatagg 201  Q
    |||||||||||||||||||||||| ||| ||| | |||| ||||| ||||||||| |||||    
T  52073676 tcttctctctacatgtccaaaccacctaagccgagttttttaccatcttttctacaatagg 52073736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 1e-49; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 42854138 - 42854277
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| |||||| | |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  42854138 gttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctactcttcttacaacggcatctacgggtcttctctctacatgtccaa 42854237  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| ||||||||||||||||||| ||| |||||||    
T  42854238 accatctaagcctattttctaccaacttctctgctatagg 42854277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 70 - 201
Target Start/End: Complemental strand, 18125313 - 18125182
Alignment:
Q  70 taggtctttctctacttttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatcta 169  Q
    |||||||  |||||| | ||||||||||||||||||||||||||||||| ||||||| ||| ||||||||| |||||||||||||||| |||||||||||    
T  18125313 taggtctccctctacctctttaacccgactctcctccatttgatctactattcttacgacggcatctacgggtcttctctctacatgttcaaaccatcta 18125214  T
Q  170 tgcctattttctaccaacttttctactatagg 201  Q
     |||||||||||||||||||||||||||||||    
T  18125213 agcctattttctaccaacttttctactatagg 18125182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 40813472 - 40813333
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||| ||||    
T  40813472 gttttcttaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacagatcttctctctacatgcccaa 40813373  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||||  ||||||||||||||||||||||||||||||    
T  40813372 accatctaaacctattttctaccaacttttctactatagg 40813333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 36545297 - 36545158
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  |||| |||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  36545297 gttttcctaggtcttcctctacgtcttttaacttgactatcctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaa 36545198  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  36545197 accatctaagcctattttctaccaacttttctactatagg 36545158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 12491272 - 12491411
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| ||||||||  ||||| | |||||||  ||||||||| ||||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  12491272 gttttcataggtcttcatctacctcttttaacttgactctccttcatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaa 12491371  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  12491372 accatctaagcctattttctaccaacttttctactatagg 12491411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 36565375 - 36565514
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  |||||||||||||||||||||| |||||||| ||| ||||||||| | ||||||||||||| ||||    
T  36565375 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctacccttcttaccacggcatctacgggtattctctctacatgcccaa 36565474  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  36565475 accatctaagcctattttctaccaacttttctactatagg 36565514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 39946968 - 39946866
Alignment:
Q  99 tctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactat 198  Q
    |||||||||||||||||||||||||||| ||| ||||||| | |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39946968 tctcctccatttgatctactcttcttacgacggcatctacaggtcttctttctacatgtccaaaccatctaagcctattttctaccaacttttctactat 39946869  T
Q  199 agg 201  Q
    |||    
T  39946868 agg 39946866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 11523857 - 11523997
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  11523857 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaa 11523956  T
Q  162 accatct-atgcctattttctaccaacttttctactatagg 201  Q
    ||||||| | |||||||  ||||||||||||||||||||||    
T  11523957 accatctaaagcctattaactaccaacttttctactatagg 11523997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 2796701 - 2796566
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| |||||| | |||||||  |||||||||||||||||| |||||||||||||| | ||||||| |    |||||||||||| ||||    
T  2796701 gttttcttaggtcttcctctacctcttttaacatgactctcctccatttgatttactcttcttacaatggcatctacag----tctctctacatgcccaa 2796606  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  2796605 accatctaagcctattttctaccaacttttctactatagg 2796566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 36395083 - 36395223
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| || ||| | |||||||  |||| |||||||||||||||||||||||||| ||| ||||||| | ||||||||||||||| ||||    
T  36395083 gttttcctaggtcttcctatacctcttttaacttgactttcctccatttgatctactcttcttaccacggcatctacaggtcttctctctacatgcccaa 36395182  T
Q  162 accatct-atgcctattttctaccaacttttctactatagg 201  Q
    ||||||| | |||||||||||||||||||||||||||||||    
T  36395183 accatctaaagcctattttctaccaacttttctactatagg 36395223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 63 - 196
Target Start/End: Complemental strand, 8932851 - 8932716
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatcta-cggatcttctctctacatgtcca 160  Q
    ||||||||||||||| |||||| | |||||||  ||||||| |||||||||| |||||||||||||| | ||| || |||||||||| ||||||||||||    
T  8932851 gttttcttaggtcttcctctacctcttttaacttgactctcttccatttgatttactcttcttacaatggcatttaacggatcttctttctacatgtcca 8932752  T
Q  161 aaccatctatgcctattttctaccaacttttctact 196  Q
    |||||||||   ||||||||||||||||||||||||    
T  8932751 aaccatctaaatctattttctaccaacttttctact 8932716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 87 - 195
Target Start/End: Complemental strand, 37077874 - 37077768
Alignment:
Q  87 ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaa 186  Q
    |||| ||||||||||||||||||||||||||||||||||| ||| |||||| || ||  ||||||||||| |||||||||||| | ||||||||||||||    
T  37077874 ttttgacccgactctcctccatttgatctactcttcttacgacggcatctatgggtc--ctctctacatgcccaaaccatctaagtctattttctaccaa 37077777  T
Q  187 cttttctac 195  Q
    |||||||||    
T  37077776 cttttctac 37077768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 21121292 - 21121177
Alignment:
Q  65 tttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaac 163  Q
    ||||||||||||  |||||| | ||||||||  |||||| ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||    
T  21121292 tttcttaggtctccctctacctcttttaacctaactctcgtccatttgatctactcttcttacgacggcatctacgggtcttctctctacatgtccaaac 21121193  T
Q  164 catctatgcctatttt 179  Q
    ||||||  ||||||||    
T  21121192 catctaaacctatttt 21121177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 104 - 201
Target Start/End: Original strand, 18752052 - 18752148
Alignment:
Q  104 tccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||||||| |||||| | |||||| |||||| ||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  18752052 tccatttgatccactcttttaacaacggcatctatggatcctctctctacatgtccaaaccatctaag-ctattttctaccaacttttctactatagg 18752148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 12025937 - 12025847
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctcta 152  Q
    |||||||||||||||  | ||| | |||||||| |||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  12025937 gttttcttaggtcttcatttacctcttttaacctgactcttctctatttgatctactcttcttacaacggcatctacggatcttctctcta 12025847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 96 - 190
Target Start/End: Original strand, 26905074 - 26905168
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttt 190  Q
    ||||||| ||||||||||||||||||||||||||| ||| || |  | |||||||||||| || ||| |||||| ||||||||||||||||||||    
T  26905074 gactctcttccatttgatctactcttcttacaacggcatgtatgagttttctctctacatatctaaatcatctaagcctattttctaccaacttt 26905168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 136
Target Start/End: Original strand, 42469861 - 42469935
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatct 136  Q
    ||||||||||||||| |||||| | |||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  42469861 gttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctactcttcttacaacggcatct 42469935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 201
Target Start/End: Original strand, 8879608 - 8879713
Alignment:
Q  92 acccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaactttt 191  Q
    ||||||| ||||||||| ||||| ||||||||||| ||| ||    ||| ||||||||||||||  ||||| |||||| | |||||||||||||||||||    
T  8879608 acccgaccctcctccatctgatcaactcttcttacgacggca----cgggtcttctctctacatacccaaatcatctaagtctattttctaccaactttt 8879703  T
Q  192 ctactatagg 201  Q
    ||||||||||    
T  8879704 ctactatagg 8879713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 114 - 201
Target Start/End: Original strand, 6510614 - 6510701
Alignment:
Q  114 ctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||||||||| ||| ||||||| ||||||||||||||||| ||||||||||||    | ||||||||||||||||||| ||||||    
T  6510614 ctactcttcttacgacggcatctacagatcttctctctacatgcccaaaccatctaaatttgttttctaccaacttttctattatagg 6510701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 45419349 - 45419246
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    ||||||||||||| ||||||||||||| ||| |   | ||||| | |||| |||||||||| |||||||| ||| | ||||||| ||||| |||||||||    
T  45419349 gactctcctccatctgatctactcttcatactag--cctctacaggtcttatctctacatgcccaaaccacctaagtctattttataccatcttttctac 45419252  T
Q  196 tatagg 201  Q
    ||||||    
T  45419251 tatagg 45419246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 43904833 - 43904902
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaacca 165  Q
    |||| |||||||| ||||||| ||||||||| || |||||||  | ||||||||||||||||||||||||    
T  43904833 gactatcctccatctgatctattcttcttactacaacatctataggtcttctctctacatgtccaaacca 43904902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 12796914 - 12796973
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||||| |||| | ||| |||||| ||||||||||||||||||||||| |||||||    
T  12796914 tcttctctctgcatgcctaaatcatctaagcctattttctaccaacttttcttctatagg 12796973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 32043698 - 32043599
Alignment:
Q  102 cctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||| ||||||| ||| ||||| || ||||| || | ||||||||||||||| |||||||| | | | ||| ||||||||| ||||| |||||||||    
T  32043698 cctccatctgatctattctccttactacaacatccacaggtcttctctctacatggccaaaccaccaaagtctagtttctaccatcttttgtactatagg 32043599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 10824332 - 10824437
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    |||| |||||||||||||||||||| | ||| || | ||||| |  |||| |||||| ||  |||||||| ||| |||||||||| |||| |||||||||    
T  10824332 gactatcctccatttgatctactctccatactacaaaatctatgagtcttttctctaaatacccaaaccacctaagcctattttcgaccatcttttctac 10824431  T
Q  196 tatagg 201  Q
    | ||||    
T  10824432 tttagg 10824437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 35643815 - 35643872
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactata 199  Q
    ||||||||||||||| |||||||| ||| || ||||||| |||| |||||||||||||    
T  35643815 tcttctctctacatgcccaaaccacctaagcatattttccaccatcttttctactata 35643872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 10080075 - 10080174
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    ||||| ||| ||||||||||||||| ||||| || | |||  | | ||||||||||||||| |||||||||| | ||||| |||| |||| |||||||||    
T  10080075 gactccccttcatttgatctactctccttactacaaaatcctcaggtcttctctctacatgcccaaaccatc-aggcctagtttccaccatcttttctac 10080173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 13589595 - 13589495
Alignment:
Q  101 tcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatag 200  Q
    |||||||| | ||||||||||| ||| || |||||||  | ||||||||| |||||| ||||||| |||  | ||||||||||||  ||||||| |||||    
T  13589595 tcctccatataatctactcttcgtactacaacatctatcggtcttctctcaacatgttcaaaccacctaatcatattttctaccatattttctattatag 13589496  T
Q  201 g 201  Q
    |    
T  13589495 g 13589495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 9695698 - 9695640
Alignment:
Q  143 cttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||||||||| |||||||| ||| ||| | |||| |||| |||||||||||||||    
T  9695698 cttctctctacatgcccaaaccacctaagccgagtttccaccatcttttctactatagg 9695640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 29520764 - 29520694
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccat 166  Q
    |||| |||||||| ||||||||||| ||||| || | ||||||   ||||||||||||||| |||||||||    
T  29520764 gactatcctccatctgatctactctccttactacaaaatctacaagtcttctctctacatgcccaaaccat 29520694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 41971992 - 41972046
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctact 196  Q
    |||||||||||||||||||||||| |||  | ||||||| |||| ||||||||||    
T  41971992 tcttctctctacatgtccaaaccacctaaacttattttccaccatcttttctact 41972046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 9905095 - 9905132
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctatttt 179  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  9905095 tcttctctctacatgtccaaaccacctaagcctatttt 9905132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 32931075 - 32930970
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    |||| |||||||| ||||||| ||| ||||| ||   |||||  ||| |||| |||||||||||||| || ||| || | |||||| ||| |||||||||    
T  32931075 gactatcctccatctgatctagtctccttactacagaatctatagattttctttctacatgtccaaatcacctaagcatgttttctgccaccttttctac 32930976  T
Q  196 tatagg 201  Q
    ||||||    
T  32930975 tatagg 32930970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 45512707 - 45512768
Alignment:
Q  140 gatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||||| || ||| |||||||||||| || ||||||| | || |||||||||||||||    
T  45512707 gatcttctctttatatgcccaaaccatctaagcttattttccatcatcttttctactatagg 45512768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 41444547 - 41444599
Alignment:
Q  149 tctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||||||||||||| |||  |||| |||| |||| |||||||||||||||    
T  41444547 tctacatgtccaaaccacctaaacctagtttccaccatcttttctactatagg 41444599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 42584471 - 42584407
Alignment:
Q  110 tgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcct 174  Q
    ||||||||||||| ||| || |||||||| | | ||||||||||||| |||||||| ||| ||||    
T  42584471 tgatctactcttcgtactacaacatctacaggttttctctctacatgcccaaaccacctaagcct 42584407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 1e-49; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 38685115 - 38684976
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||| ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||    
T  38685115 gttttcctaggtcttcctctacctcttttaacctgactctcctccatttgatctactcttcttacgacggcatctacgggtcttctctctacatgtccaa 38685016  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  38685015 accatctaagcctattttctaccaacttttctactatagg 38684976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 16347512 - 16347651
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||| ||||||||||||||||||||||||||||| ||| | ||||||||| ||||||||||||||||||||    
T  16347512 gttttcctaggtcttcctctacctcttttaacctgactctcctccatttgatctactcttcttgcaaaggcatctacgggtcttctctctacatgtccaa 16347611  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  16347612 accatctaagcctattttctaccaacttttctactatagg 16347651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 3301992 - 3301853
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| |||||| | |||||||| ||||||||||||||||||  | |||||| |||||| ||||||||| ||||||||||||||||||||    
T  3301992 gttttcttaggtcttcctctacctcttttaacctgactctcctccatttgattcattcttctaacaacggcatctacgggtcttctctctacatgtccaa 3301893  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  3301892 accatctaagcctattttctaccaacttttctactatagg 3301853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 20456921 - 20456782
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||| |||    
T  20456921 gttttcgtaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgttcaa 20456822  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  20456821 accatctaagcctattttctaccaacttttctactatagg 20456782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 1287713 - 1287852
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||| ||||||||  ||||||||||||||| ||||    
T  1287713 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgtgtcttctctctacatgcccaa 1287812  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  1287813 accatctaagcctattttctaccaacttttctactatagg 1287852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 4496532 - 4496393
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  4496532 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaa 4496433  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| ||||||||||||||| |||||||||||||||    
T  4496432 accatctaagcctattttctaccagcttttctactatagg 4496393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 24178658 - 24178519
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||||| ||||    
T  24178658 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtcttctctccacatgcccaa 24178559  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  24178558 accatctaagcctattttctaccaacttttctactatagg 24178519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 12492518 - 12492656
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||  ||| ||||||||| ||||||||||||||| ||||    
T  12492518 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaacacggcatctacgggtcttctctctacatgcccaa 12492617  T
Q  162 accatctatgcctattttctaccaacttttctactatag 200  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  12492618 accatctaagcctattttctaccaacttttctactatag 12492656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 1275378 - 1275273
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  1275378 gactctcctccatttgatctactcttcttaccacggcatttacggatcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctac 1275279  T
Q  196 tatagg 201  Q
    ||||||    
T  1275278 tatagg 1275273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 14665862 - 14665723
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||  |||||| | |||||||| |||||| |||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||    
T  14665862 gttttcctaggtctccctctacctcttttaacctgactctgctccatttgatctactcttcttacgacggcatctacgggtcttctctctacatgtccaa 14665763  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||| |||||| |||||||||||    
T  14665762 accatctaagcctattttctatcaacttctctactatagg 14665723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 70 - 201
Target Start/End: Original strand, 2075615 - 2075747
Alignment:
Q  70 taggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatct 168  Q
    |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| |||||||||||    
T  2075615 taggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaaaccatct 2075714  T
Q  169 atgcctattttctaccaacttttctactatagg 201  Q
    | ||||||| |||||||||||||||||| ||||    
T  2075715 aagcctattgtctaccaacttttctactgtagg 2075747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 28976993 - 28977132
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  |||||||||||||||||||||| |||||||| ||| ||| ||||| |||||||||||||||  |||    
T  28976993 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctacccttcttaccacggcatatacgggtcttctctctacatgcacaa 28977092  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  28977093 accatctaagcctattttctaccaacttttctactatagg 28977132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 87 - 192
Target Start/End: Original strand, 26884847 - 26884952
Alignment:
Q  87 ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaa 186  Q
    |||| ||||||||||||||||| ||||||||||||||||| || ||||||||  ||||| ||||||||||||||||||  ||| ||||||||||||||||    
T  26884847 ttttgacccgactctcctccatctgatctactcttcttacgacaacatctacaaatcttatctctacatgtccaaaccgcctaagcctattttctaccaa 26884946  T
Q  187 cttttc 192  Q
    ||||||    
T  26884947 cttttc 26884952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 10639414 - 10639314
Alignment:
Q  100 ctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactata 199  Q
    |||||||||||| |||||||||||||| | | ||||||| | ||||||||||||||| ||||  |||||| |||||||||||||||||||||||||||||    
T  10639414 ctcctccatttgttctactcttcttaccatggcatctacaggtcttctctctacatgcccaattcatctaagcctattttctaccaacttttctactata 10639315  T
Q  200 g 200  Q
    |    
T  10639314 g 10639314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 117 - 201
Target Start/End: Complemental strand, 34273120 - 34273036
Alignment:
Q  117 ctcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||||| ||||||||| | | ||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||    
T  34273120 ctcttcttaccacgacatctgcaggtcttctctctacatgcccaaaccatctaagcctattttctaccaacttttctattatagg 34273036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 14749421 - 14749316
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    ||||| ||||||| ||||| ||||| ||||||||   ||| || | |||||||||||||||||||||||||||| | ||| |||||||||| ||||||||    
T  14749421 gactcccctccatctgatcgactctccttacaacagaatccacaggtcttctctctacatgtccaaaccatctaagtctagtttctaccaatttttctac 14749322  T
Q  196 tatagg 201  Q
    ||||||    
T  14749321 tatagg 14749316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 87 - 200
Target Start/End: Complemental strand, 36215621 - 36215508
Alignment:
Q  87 ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaa 186  Q
    |||| ||| |||||||||||||  |||||||||||||| ||||||||| ||||  | |||| ||||| || | |||||||||| || ||||| |||||||    
T  36215621 ttttgacctgactctcctccatccgatctactcttctttcaacgacatatacgagttttctttctacgtgccgaaaccatctaagcatatttcctaccaa 36215522  T
Q  187 cttttctactatag 200  Q
    ||||||||||||||    
T  36215521 cttttctactatag 36215508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 31636104 - 31636193
Alignment:
Q  112 atctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||||| ||||| || ||||| |||| ||||||||||||||| |||||||| ||| | ||| ||||||||| |||||||||||||||    
T  31636104 atctactctccttactacaacatccacgggtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactatagg 31636193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 94 - 178
Target Start/End: Original strand, 38501584 - 38501668
Alignment:
Q  94 ccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattt 178  Q
    ||||||||||||||| | ||||||||||||||| ||| |||||||   |||||||| |||||||||||||||||||  |||||||    
T  38501584 ccgactctcctccatctaatctactcttcttacgacggcatctacaagtcttctctttacatgtccaaaccatctaaacctattt 38501668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 70 - 152
Target Start/End: Original strand, 2915636 - 2915719
Alignment:
Q  70 taggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctcta 152  Q
    |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| | | ||||||||| |||||||||||    
T  2915636 taggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccaaggcatctacgggtcttctctcta 2915719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 43475354 - 43475249
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    |||| |||||||| ||||||||||| ||||| || |||||||| | ||||||||||  ||  |||||||| ||| ||||| |||| |||| |||||||||    
T  43475354 gactatcctccatctgatctactctccttactacaacatctacaggtcttctctctgaatacccaaaccacctaagcctagtttccaccatcttttctac 43475255  T
Q  196 tatagg 201  Q
    ||||||    
T  43475254 tatagg 43475249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 13561520 - 13561579
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactctt 121  Q
    ||||||||||||||| |||||| | |||||||| ||||||||||||||||||||||||||    
T  13561520 gttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctactctt 13561579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 7359428 - 7359532
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    |||| |||||||| ||||||||||| ||||| ||   ||||||  |||||||||||||||| |||||||| |||  ||||||||| ||||  ||||||||    
T  7359428 gactatcctccatctgatctactctccttactacagaatctacatatcttctctctacatg-ccaaaccacctaaacctattttccaccatattttctac 7359526  T
Q  196 tatagg 201  Q
    ||||||    
T  7359527 tatagg 7359532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 14911320 - 14911264
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctact 118  Q
    ||||||||||||||| |||||| | |||||||||||||||||| |||||||||||||    
T  14911320 gttttcttaggtcttcctctacctcttttaacccgactctccttcatttgatctact 14911264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 33667284 - 33667225
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||||||||||| |||||||| ||| | ||| ||||||||| |||||||||||||||    
T  33667284 tcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactatagg 33667225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 15168855 - 15168801
Alignment:
Q  147 tctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    |||| |||||||||||||| ||  ||||||||||||||| |||||||||||||||    
T  15168855 tctcaacatgtccaaaccaccttagcctattttctaccatcttttctactatagg 15168801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 1525758 - 1525653
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    ||||||||||||| ||||||||||| || ||  |   ||  |||| |||||||||||||||||||| ||| ||| | ||| ||||||||| |||||||||    
T  1525758 gactctcctccatctgatctactctcctaactgcagaattcacgggtcttctctctacatgtccaagccacctaagtctagtttctaccatcttttctac 1525659  T
Q  196 tatagg 201  Q
     |||||    
T  1525658 aatagg 1525653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 199
Target Start/End: Original strand, 17340594 - 17340707
Alignment:
Q  86 tttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctacca 185  Q
    ||||| ||| ||||||||||||| ||||||||||||| ||| ||  ||||| ||  | ||||||  ||||||| |||||| ||| ||||||||||||  |    
T  17340594 tttttgacctgactctcctccatctgatctactcttcatactacatcatctgcgagttttctcttaacatgtcaaaaccacctaagcctattttctaata 17340693  T
Q  186 acttttctactata 199  Q
    |  |||||||||||    
T  17340694 atgtttctactata 17340707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 79622 - 79522
Alignment:
Q  101 tcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatag 200  Q
    |||||||||||||| ||||| ||||| ||   |||||  | |||||||||||||||||||||||| |||    | ||||| |||| ||||||||||||||    
T  79622 tcctccatttgatcgactctccttactacagaatctataggtcttctctctacatgtccaaaccacctaattatgttttccaccatcttttctactatag 79523  T
Q  201 g 201  Q
    |    
T  79522 g 79522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 15489665 - 15489765
Alignment:
Q  101 tcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatag 200  Q
    |||||||| | ||||||||| ||||  || | ||||||  |||||||||||||||| |||||||||||| ||  | |||| |||| ||||||||| ||||    
T  15489665 tcctccatctaatctactctccttaatacaaaatctacaaatcttctctctacatgcccaaaccatctaagctgagtttcaaccatcttttctacaatag 15489764  T
Q  201 g 201  Q
    |    
T  15489765 g 15489765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 27799959 - 27799892
Alignment:
Q  94 ccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| ||||||| ||||||||| || ||||||||   ||||||||||||||| ||||    
T  27799959 ccgactatcctccatatgatctaatcttcttactacaacatctacatctcttctctctacatgcccaa 27799892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 6889061 - 6889011
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttc 192  Q
    ||||||||||||||||||||||||  || |||||||||| |||| ||||||    
T  6889061 tcttctctctacatgtccaaaccacttaagcctattttccaccatcttttc 6889011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 21952424 - 21952366
Alignment:
Q  143 cttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||||||||||||||||||| ||  | ||| ||||| ||| |||||||||||||||    
T  21952424 cttctctctacatgtccaaaccacctgagtctagtttctgccatcttttctactatagg 21952366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 28676663 - 28676605
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatag 200  Q
    ||||||||||||||| | |||||| ||| | |||||||| |||| ||||||||||||||    
T  28676663 tcttctctctacatgccgaaaccacctaagactattttccaccatcttttctactatag 28676605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 42199393 - 42199299
Alignment:
Q  103 ctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctacta 197  Q
    |||||| ||||||||||| ||||| ||   ||||||   ||||||||||||||| |||||||| ||| | ||| |||| |||| |||||||||||    
T  42199393 ctccatgtgatctactctccttactacagaatctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttctacta 42199299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 18351112 - 18351181
Alignment:
Q  133 atctacggatcttctctctaca-tgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||| | ||||||||||||| || |||||||| ||| ||||| |||||||||  ||||||||||||||    
T  18351112 atctacaggtcttctctctacaatgcccaaaccacctaagcctagtttctaccatattttctactatagg 18351181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 3e-47; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 22220 - 22082
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||| ||||| |||||| | |||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  22220 gttttcttaagtcttcctctacctcttttaacccgactctcctccatttaatctactcttcttacaacggcatctacgggtcttctctctacatgtccaa 22121  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| ||||| |||||||||||||||||||||||||    
T  22120 accatctaagccta-tttctaccaacttttctactatagg 22082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 35033294 - 35033155
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| |||||| | |||||||| |||||||||||||||||| |||||||||||||| | ||||||||| ||||||||||||||||||||    
T  35033294 gttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatttactcttcttacaatggcatctacgggtcttctctctacatgtccaa 35033195  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  35033194 accatataagcctattttctaccaacttttctactatagg 35033155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 47233730 - 47233869
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||||||||||||  || || | |||||||| |||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||    
T  47233730 gttttcttaggtcttcttcaacatcttttaacctgactctcctccatttgatctactcttctaacaacggcatctacgggtcttctctctacatgtccaa 47233829  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  47233830 accatctaagcctattttctaccaacttttctactatagg 47233869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 63 - 199
Target Start/End: Complemental strand, 53519740 - 53519603
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||    
T  53519740 gttttcttaggtcttcctctacctcttttaacatgactctcctccatttgatctactcttcttacaacggcatctacggttcttctctattcatgtccaa 53519641  T
Q  162 accatctatgcctattttctaccaacttttctactata 199  Q
    | |||||| |||||||||||||||||||||||||||||    
T  53519640 aacatctaagcctattttctaccaacttttctactata 53519603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 5168980 - 5168841
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| |||||| | |||||||  |||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||| |||    
T  5168980 gttttcttaggtcttcctctacctcttttaactagactctcctccatttgatctactcttctaacaacggcatctacgggtcttctctctacatgttcaa 5168881  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| || |||||||||||||||||||||| |||||    
T  5168880 accatctaagcgtattttctaccaacttttctaccatagg 5168841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 38060579 - 38060440
Alignment:
Q  63 gttttcttaggtctttctctac-ttttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||  |||||| |||||||||| ||||||||||||||| ||||||||||||||| ||| ||||||| | ||||||||||||||||||||    
T  38060579 gttttcctaggtctccctctaccttttttaacctgactctcctccatttaatctactcttcttacgacggcatctacaggtcttctctctacatgtccaa 38060480  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  38060479 accatctaagcctattttctaccaacttttctattatagg 38060440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 51447869 - 51447983
Alignment:
Q  87 ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaa 186  Q
    |||||||  ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  51447869 ttttaacttgactctcctccatttgatctactcttcttaccacggcatctacggatcttctctctacatgcccaaactatctaagcctattttctaccaa 51447968  T
Q  187 cttttctactatagg 201  Q
    |||||||||||||||    
T  51447969 cttttctactatagg 51447983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 52138948 - 52138809
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||| ||||| ||||||||| ||| ||||||| | ||||||||||||||| ||||    
T  52138948 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttaatctattcttcttaccacggcatctacaggtcttctctctacatgcccaa 52138849  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  52138848 accatctaagcctattttctaccaacttttctactatagg 52138809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 64 - 201
Target Start/End: Complemental strand, 25191524 - 25191386
Alignment:
Q  64 ttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaa 162  Q
    ||||||||| |||| |||||| | |||||||| | |||||||||||||||||| ||||||||||||||  |||||||| |||||||||||||||||||||    
T  25191524 ttttcttagttcttcctctacctcttttaaccgggctctcctccatttgatcttctcttcttacaacggtatctacgggtcttctctctacatgtccaaa 25191425  T
Q  163 ccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||| | ||||||||| |||| ||||||||||||||    
T  25191424 ccatctaagtctattttcttccaatttttctactatagg 25191386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 64 - 199
Target Start/End: Complemental strand, 38850267 - 38850131
Alignment:
Q  64 ttttcttaggtctttctctacttttt-taacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaa 162  Q
    ||||| |||||||| |||||| | || ||||  |||||||||||||| |||||||||||||||| ||||| ||||| ||||||||||||||||| |||||    
T  38850267 ttttcctaggtcttcctctacctcttctaacttgactctcctccattcgatctactcttcttacgacgacctctactgatcttctctctacatgcccaaa 38850168  T
Q  163 ccatctatgcctattttctaccaacttttctactata 199  Q
    ||||||| | |||||||||||||||||||||||||||    
T  38850167 ccatctaagtctattttctaccaacttttctactata 38850131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 28245585 - 28245446
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| ||||||||  ||||| | |||||||  |||||||||||||||||| |||||||||||| ||| ||||||||| | ||||||||||||| ||||    
T  28245585 gttttcctaggtcttcatctacctcttttaacttgactctcctccatttgatatactcttcttaccacggcatctacgggttttctctctacatgcccaa 28245486  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  28245485 accatctaagtctattttctaccaacttttctactatagg 28245446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 54279168 - 54279029
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| ||||||||  ||||| | |||||||  |||||||||||||||||||||||||| |||| ||| ||||||||| |||||||||||| || ||||    
T  54279168 gttttcctaggtcttcttctacctcttttaacttgactctcctccatttgatctactctttttaccacggcatctacgggtcttctctctacgtgcccaa 54279069  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    ||| |||| |||||||||||||||||||||||||||||||    
T  54279068 accgtctaagcctattttctaccaacttttctactatagg 54279029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 63 - 199
Target Start/End: Original strand, 33272157 - 33272293
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  |||||||||||||||||| ||| |||||||| ||| ||||||| | ||||||||||||||| ||||    
T  33272157 gttttcgtaggtcttcctctacctcttttaacttgactctcctccatttgatatacacttcttaccacggcatctacag-tcttctctctacatgcccaa 33272255  T
Q  162 accatctatgcctattttctaccaacttttctactata 199  Q
    |||||||| |||||||||||||||||||||||||||||    
T  33272256 accatctaagcctattttctaccaacttttctactata 33272293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 48953555 - 48953695
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatc-ttctctctacatgtcca 160  Q
    |||||| |||||||| |||||||| |||| ||||||||||||||||| ||||||||||||||||| || |||||| ||| || |||||| |||||| |||    
T  48953555 gttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttacgacaacatctgcgggtctttctctttacatgccca 48953654  T
Q  161 aaccatctatgcctattttctaccaacttttctactatagg 201  Q
    || |||||| |  ||||||||||||||||||||||||||||    
T  48953655 aatcatctaagtttattttctaccaacttttctactatagg 48953695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 43694938 - 43695038
Alignment:
Q  101 tcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatag 200  Q
    |||| ||||||||||| ||||||||| ||||||||||| | ||||||||||||||| |||||||||||| ||  ||||||||||||||||||||||||||    
T  43694938 tccttcatttgatctaatcttcttacgacgacatctacaggtcttctctctacatgcccaaaccatctaagcaaattttctaccaacttttctactatag 43695037  T
Q  201 g 201  Q
    |    
T  43695038 g 43695038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 63 - 177
Target Start/End: Complemental strand, 48508383 - 48508268
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||| ||| ||||||||||||| ||||||||||||||||| || |||||||||| ||||||||||||||| ||||    
T  48508383 gttttcctaggtcttcctctacctcttttgacctgactctcctccatctgatctactcttcttacgacaacatctacgggtcttctctctacatgcccaa 48508284  T
Q  162 accatctatgcctatt 177  Q
    |||||||| |||||||    
T  48508283 accatctaagcctatt 48508268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 70 - 201
Target Start/End: Complemental strand, 19758040 - 19757909
Alignment:
Q  70 taggtctttctctacttttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatcta 169  Q
    |||||||| |||||| ||||| | |  |||||||||||| ||||||||||||||||| || |||||||| | |||||||||| ||||  ||||||| |||    
T  19758040 taggtcttcctctacctttttgatctaactctcctccatctgatctactcttcttactacaacatctacaggtcttctctctgcatgctcaaaccaccta 19757941  T
Q  170 tgcctattttctaccaacttttctactatagg 201  Q
      |||||||||||||| |||||||||||||||    
T  19757940 aacctattttctaccatcttttctactatagg 19757909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 63 - 199
Target Start/End: Complemental strand, 45728298 - 45728158
Alignment:
Q  63 gttttcttaggtctttctcta-cttttttaacccgactctcctccatttgatcta--ctcttcttacaacgacatctacggatctt-ctctctacatgtc 158  Q
    |||||| |||||||| ||||| || |||||||  |||||||||||||||||| ||  ||||||||||||||||||||| || | || |||||||||||||    
T  45728298 gttttcctaggtcttcctctatctcttttaacatgactctcctccatttgatatatactcttcttacaacgacatctatgggtttttctctctacatgtc 45728199  T
Q  159 caaaccatctatgcctattttctaccaacttttctactata 199  Q
     |||||||||   |||| |||||||||||||||||||||||    
T  45728198 aaaaccatctgatcctactttctaccaacttttctactata 45728158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 97 - 201
Target Start/End: Complemental strand, 19737110 - 19737006
Alignment:
Q  97 actctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctact 196  Q
    |||||||||||| ||||||||||||||||| || |||||||| | |||||||||| ||||  ||||||| |||  |||||||||||||| ||||||||||    
T  19737110 actctcctccatctgatctactcttcttactacaacatctacaggtcttctctctgcatgctcaaaccacctaaacctattttctaccatcttttctact 19737011  T
Q  197 atagg 201  Q
    |||||    
T  19737010 atagg 19737006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 96 - 194
Target Start/End: Complemental strand, 39235252 - 39235154
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttcta 194  Q
    |||| |||||||| ||||||||||||| ||| || |||||||| | ||||||||||||||| |||||||| ||| ||||||||||||||| ||||||||    
T  39235252 gactttcctccatctgatctactcttcgtactacaacatctacaggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttcta 39235154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 3186916 - 3186778
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||||||||| |||||| || | |||| ||| |||| | ||| || ||||||| | ||||||||| |||||||||  |||||||||||||||| ||||    
T  3186916 gttttcttaggtatttctccacctcttttgacctgacttttctcaatctgatctatttttcttacaatgacatctacaaatcttctctctacatgcccaa 3186817  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    | |||||| |||||||||||||||||||| | ||||||||    
T  3186816 atcatcta-gcctattttctaccaactttcccactatagg 3186778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 201
Target Start/End: Original strand, 50960803 - 50960906
Alignment:
Q  94 ccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttct 193  Q
    ||||||||||||||| ||||||||||||||| | || ||||     | ||||||||||||||| |||||||| ||| ||||||||||||||| |||||||    
T  50960803 ccgactctcctccatctgatctactcttctttctacaacata----ggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttct 50960898  T
Q  194 actatagg 201  Q
    ||||||||    
T  50960899 actatagg 50960906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 38430962 - 38430857
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    ||||||||||||| ||||||||||||| ||| || |||||| | | || |||||||||||| |||| | | ||| ||||||||||||||| |||||||||    
T  38430962 gactctcctccatctgatctactcttcatactacaacatctgcaggtcgtctctctacatgcccaatcaacctaagcctattttctaccatcttttctac 38430863  T
Q  196 tatagg 201  Q
    ||||||    
T  38430862 tatagg 38430857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 27917679 - 27917579
Alignment:
Q  101 tcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatag 200  Q
    |||||||||||||||| ||||  ||  || ||||||||   |||||| ||||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  27917679 tcctccatttgatctattctttctaatacaacatctacaagtcttctttctacatgtccaaaccatctaagcctatttcctaccatcttttctactatag 27917580  T
Q  201 g 201  Q
    |    
T  27917579 g 27917579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 26490426 - 26490324
Alignment:
Q  99 tctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactat 198  Q
    ||||||| || ||||||||||||| ||| || ||||| |  | |||| | ||||||||||||||||| ||| ||||||||||||||| ||||||||||||    
T  26490426 tctcctctatctgatctactcttcgtactacaacatccaacggtcttttatctacatgtccaaaccacctaagcctattttctaccatcttttctactat 26490327  T
Q  199 agg 201  Q
    |||    
T  26490326 agg 26490324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 49503722 - 49503827
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    ||||| ||||||| ||||||||| ||  ||  || |||||||  | ||||||||||||||| |||||||| ||| ||||||||||||||| |||||||||    
T  49503722 gactcccctccatctgatctactgtttgtattacaacatctattggtcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctac 49503821  T
Q  196 tatagg 201  Q
    ||||||    
T  49503822 tatagg 49503827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 103 - 199
Target Start/End: Original strand, 48734310 - 48734406
Alignment:
Q  103 ctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactata 199  Q
    |||||| ||||||||||||| ||| ||  | ||||| | ||||||||||||||| |||||||| ||| ||||||||||||||| || ||||||||||    
T  48734310 ctccatctgatctactcttcgtactacagcctctacagttcttctctctacatgcccaaaccacctaagcctattttctaccatctgttctactata 48734406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 52678982 - 52679118
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| ||||||||  ||||| | ||||||||||||||||||||||  |||||| | |||||||  | ||||||||   ||||||||||||||||||||    
T  52678982 gttttcctaggtcttcttctacatcttttaacccgactctcctccatccgatctatttttcttac--caacatctacaagtcttctctctacatgtccaa 52679079  T
Q  162 accatctatgcctattttctaccaacttttctactatag 200  Q
    | || |   ||||||||||| ||||||||||| ||||||    
T  52679080 atcaccagagcctattttcttccaacttttctgctatag 52679118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 102 - 201
Target Start/End: Complemental strand, 54128486 - 54128387
Alignment:
Q  102 cctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||| ||||||||||| | |||  |  ||||||| | |||| |||||||||| |||||||| ||| ||||||||||||||| |||||||||||||||    
T  54128486 cctccatctgatctactctacgtactgcatcatctacaggtcttttctctacatgcccaaaccacctaagcctattttctaccatcttttctactatagg 54128387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 45289264 - 45289359
Alignment:
Q  101 tcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctact 196  Q
    |||||||| ||||||||||||||||| || | ||||||   | |||||||||| || |||||||| ||| |||||||||| |||| ||||||||||    
T  45289264 tcctccatctgatctactcttcttactacaaaatctacaagtgttctctctacgtgcccaaaccacctaagcctattttccaccatcttttctact 45289359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 42510184 - 42510287
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    |||| |||||||| ||||||||||| ||||| || | |||||  | |||||||  ||||||||||||||| ||| |||||||||| || | |||||||||    
T  42510184 gactatcctccatctgatctactctccttaccacaaaatctataggtcttctc--tacatgtccaaaccacctaagcctattttccactatcttttctac 42510281  T
Q  196 tatagg 201  Q
    ||||||    
T  42510282 tatagg 42510287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 41842679 - 41842784
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    |||| ||||||||||||||||||||  |||| ||   |||||| | ||||||||||||||  |||||||| ||| | ||  |||| |||| |||||||||    
T  41842679 gactatcctccatttgatctactctcattactacagaatctaccgctcttctctctacatacccaaaccacctaagactggtttccaccatcttttctac 41842778  T
Q  196 tatagg 201  Q
    ||||||    
T  41842779 tatagg 41842784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 200
Target Start/End: Original strand, 54425101 - 54425244
Alignment:
Q  65 tttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactctt-------cttacaacgacatctacggatcttctctctacatg 156  Q
    ||||||||||||| |||||| | |||| ||| || |||||||||| |||||||||||        ||||||||| ||||| | | ||||||| |||||||    
T  54425101 tttcttaggtcttcctctacctcttttgacctgaatctcctccatctgatctactctaaatcctacttacaacggcatctgcaggtcttctccctacatg 54425200  T
Q  157 tccaaaccatctatgcctattttctaccaacttttctactatag 200  Q
    | |||| | |||| | ||||||||||| |||||||||| |||||    
T  54425201 ttcaaatcttctaagtctattttctacaaacttttctattatag 54425244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 29600970 - 29600910
Alignment:
Q  140 gatcttctctctacatgtccaaaccatct-atgcctattttctaccaacttttctactata 199  Q
    ||||||||||||||||| ||||||||||| |  |||||||||||||| ||||| |||||||    
T  29600970 gatcttctctctacatgcccaaaccatctaaaacctattttctaccatcttttttactata 29600910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 3987115 - 3987056
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||||||||||  |||||||| ||| | ||| ||||||||| |||||||||||||||    
T  3987115 tcttctctctacattcccaaaccacctaagtctagtttctaccatcttttctactatagg 3987056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 138
Target Start/End: Original strand, 19162723 - 19162797
Alignment:
Q  65 tttcttaggtctttctcta-cttttttaacccgactctcctccatttgatctactcttcttacaacgacatctac 138  Q
    |||| |||||||| ||||| || |||| ||| ||||||||| ||| ||||||||||||||||| || ||||||||    
T  19162723 tttcctaggtcttcctctaactcttttgacctgactctccttcatctgatctactcttcttacgacaacatctac 19162797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 19676248 - 19676353
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    |||||||||| || |||||| |||||  ||| ||  ||||||| | ||||||||||||||| | | |||| ||| ||| |||||||| || ||||| |||    
T  19676248 gactctcctctatctgatcttctctttgtactacagcatctacaggtcttctctctacatgccaataccacctaagccaattttctatcatcttttgtac 19676347  T
Q  196 tatagg 201  Q
    ||||||    
T  19676348 tatagg 19676353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 44134043 - 44134099
Alignment:
Q  141 atcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctacta 197  Q
    ||||||| |||| |||||||||||| ||| | |||||||| |||| |||||||||||    
T  44134043 atcttctatctagatgtccaaaccacctaagtctattttccaccatcttttctacta 44134099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 1e-46; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 37797999 - 37797861
Alignment:
Q  63 gttttcttaggtctttctctacttttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaa 162  Q
    |||||| ||| |||| ||||| | |||||||| ||||||| ||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  37797999 gttttcctagatcttcctctaatcttttaacctgactctcatccatttgatctactcttcttacgacggcatctacgaatcttctctctacatgtccaaa 37797900  T
Q  163 ccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  37797899 ccatctaagcctattttctaccaacttttctactatagg 37797861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 31959948 - 31960087
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  31959948 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaa 31960047  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  31960048 accatctaagcctattttctaccaacttttctactatagg 31960087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 48174227 - 48174366
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  48174227 gttttcttaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaa 48174326  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    | |||||| |||||||||||||||||||||||||||||||    
T  48174327 atcatctaagcctattttctaccaacttttctactatagg 48174366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 52569649 - 52569788
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  52569649 gttttcgtaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaa 52569748  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  52569749 accatctaagcctattttctaccaacttttctactatagg 52569788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 64 - 201
Target Start/End: Original strand, 27450314 - 27450452
Alignment:
Q  64 ttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaa 162  Q
    |||||||||||||| || ||| | |||||||| || ||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||    
T  27450314 ttttcttaggtcttcctttacctcttttaacctgattctactccatttgatctactcttcttacaacggcatctacgggtcttctctctacatgtcaaaa 27450413  T
Q  163 ccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  27450414 ccatctaagcctattttctaccaacttttctactatagg 27450452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 43434072 - 43433933
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  |||||||||||||||||| |||||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  43434072 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatttactcttcttaccacggcatctacgggtcttctctctacatgcccaa 43433973  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  43433972 accatctaagcctattttctaccaacttttctactatagg 43433933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 436377 - 436238
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||| ||||||| | ||||||||||||||| ||||    
T  436377 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctacaggtcttctctctacatgcccaa 436278  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    | |||||| |||||||||||||||||||||||||||||||    
T  436277 atcatctaagcctattttctaccaacttttctactatagg 436238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 4441001 - 4440862
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||  ||||||||| ||||||||||| ||| ||||    
T  4441001 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacagcatctacgggtcttctctctagatgcccaa 4440902  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  4440901 accatctaagcctattttctaccaacttttctactatagg 4440862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 56375438 - 56375299
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| |||||| | |||||||  ||||||||||||||| ||||||||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  56375438 gttttcttaggtcttcctctacctcttttaacttgactctcctccattttatctactcttcttaccacggcatctacgggtcttctctctacatgcccaa 56375339  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||| ||||||||||||||||||| ||||||    
T  56375338 accatctaagcctgttttctaccaacttttctattatagg 56375299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 1777151 - 1777290
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| ||| |||||| |  ||||||||||| ||||||||    
T  1777151 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatctatgagtcttctctctagatgtccaa 1777250  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| ||||||||||||||||||||| |||||||||    
T  1777251 accatctaagcctattttctaccaacttttttactatagg 1777290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 39100670 - 39100808
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||| |||| || ||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  39100670 gttttcctaggtcttcctctacctcttttaacctgactatcttccatctgatctactcttcttacaacg-catctacggatcttctctctacatgttcaa 39100768  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||| |||||||||| |||||||    
T  39100769 accatctaagcctattttctatcaacttttcttctatagg 39100808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 53707942 - 53707803
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| | |||||| |||||| | |||||||  |||| ||||||||||||| |||||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  53707942 gttttcctcggtcttcctctacctcttttaacttgactatcctccatttgatatactcttcttaccacggcatctacgggtcttctctctacatgcccaa 53707843  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  53707842 accatctaagcctattttctaccaacttttctactatagg 53707803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 63 - 191
Target Start/End: Complemental strand, 32479186 - 32479057
Alignment:
Q  63 gttttcttaggtctttctctactttttt-aacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||||||||| |||||| | ||| |||| | ||||||||||||||||||||||||||||||||| | ||||| | ||| ||||||||||||||||    
T  32479186 gttttcttaggtcttcctctacctctttcaacctgtctctcctccatttgatctactcttcttacaacggcctctacaggtctcctctctacatgtccaa 32479087  T
Q  162 accatctatgcctattttctaccaactttt 191  Q
    |||||||| |||||||||||||||||||||    
T  32479086 accatctaagcctattttctaccaactttt 32479057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 63 - 198
Target Start/End: Original strand, 48622677 - 48622813
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  |||||||||||||||||||| || ||||||| ||| ||| ||||| ||||||||||||||| ||||    
T  48622677 gttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatcttcttttcttaccacggcatttacgggtcttctctctacatgcccaa 48622776  T
Q  162 accatctatgcctattttctaccaacttttctactat 198  Q
    |||||||| ||||||||||||||||||||||||||||    
T  48622777 accatctaagcctattttctaccaacttttctactat 48622813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 33227357 - 33227218
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| ||||||||  ||||| | |||||||  ||||||| ||||||||||||||||||||||  ||| ||||||||| ||||||||||||||| ||||    
T  33227357 gttttcctaggtcttcatctacctcttttaacttgactctcttccatttgatctactcttcttaacacggcatctacgggtcttctctctacatgcccaa 33227258  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    || ||||| |||||||||||||||||||||||||||||||    
T  33227257 acaatctaagcctattttctaccaacttttctactatagg 33227218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 50287110 - 50286971
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| ||||||||  ||||| | |||||||  |||||||||||||| |||||||||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  50287110 gttttcataggtcttcttctacctcttttaacttgactctcctccattcgatctactcttcttaccacggcatctacgggtcttctctctacatgcccaa 50287011  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||| | | |||||||||||||||||||||||||||||    
T  50287010 accatccaagtctattttctaccaacttttctactatagg 50286971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 28236330 - 28236192
Alignment:
Q  63 gttttcttaggtctttctctacttttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaa 162  Q
    |||||| |||||||| ||||||  |||||||  || ||||| |||||||||| ||||||||||| |||||||||||   ||||||||||||||| |||||    
T  28236330 gttttcctaggtcttcctctaccattttaacttgattctccgccatttgatcaactcttcttacgacgacatctacaagtcttctctctacatgcccaaa 28236231  T
Q  163 ccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  28236230 ccatctaagcctattttccaccaacttttctactatagg 28236192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 46582959 - 46583097
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacgga-tcttctctctacatgtcca 160  Q
    |||||| |||||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| |||||||||||||  ||||||||  ||||| |||    
T  46582959 gttttcataggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacgacatctacggggtcttctct--acatgccca 46583056  T
Q  161 aaccatctatgcctattttctaccaacttttctactatagg 201  Q
    | ||||||| |||||||||||||||||||||||||||||||    
T  46583057 acccatctaagcctattttctaccaacttttctactatagg 46583097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 33190982 - 33191121
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||||||  |||||| ||||||||||||||| |||||||  ||| ||||||||| ||||||||||||||| ||||    
T  33190982 gttttcctaggtcttcctctacctcttttaacttgactcttctccatttgatctacccttcttaacacggcatctacgggtcttctctctacatgcccaa 33191081  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    || ||||| | |||||||||||||||||||||||||||||    
T  33191082 acaatctaagtctattttctaccaacttttctactatagg 33191121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 84 - 201
Target Start/End: Original strand, 23906453 - 23906568
Alignment:
Q  84 cttttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctac 183  Q
    ||||||||||  ||||||||||||||| ||||||||||||||| ||| ||||||||  |||||||||||||||  ||||||||||| |||||||||||||    
T  23906453 cttttttaacttgactctcctccatttaatctactcttcttaccacggcatctacg--tcttctctctacatgctcaaaccatctaagcctattttctac 23906550  T
Q  184 caacttttctactatagg 201  Q
     |||||||||||||||||    
T  23906551 aaacttttctactatagg 23906568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 63 - 175
Target Start/End: Complemental strand, 27983341 - 27983228
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    ||||||||| ||||| |||||| | |||||||| |||||||||||||||||| |||||||||||||||| ||||||||  |||||||||||||||| |||    
T  27983341 gttttcttatgtcttcctctacctcttttaacctgactctcctccatttgatatactcttcttacaacggcatctacgagtcttctctctacatgttcaa 27983242  T
Q  162 accatctatgccta 175  Q
    |||||||| |||||    
T  27983241 accatctaagccta 27983228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 37773619 - 37773724
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    ||||||| ||||||||||||||||| |||||||||| || ||||| || ||| |||||||| |||||||||||| |||||||||||||| ||||||||||    
T  37773619 gactctcatccatttgatctactctacttacaacgatatttacgggtcgtctatctacatgcccaaaccatctaagcctattttctaccgacttttctac 37773718  T
Q  196 tatagg 201  Q
    ||||||    
T  37773719 tatagg 37773724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 87 - 199
Target Start/End: Complemental strand, 20192156 - 20192044
Alignment:
Q  87 ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaa 186  Q
    |||||||  |||||||||||||||||| |||||||||||| ||  ||||||||| ||||||||||||||| |||||| ||||| || ||||||||| |||    
T  20192156 ttttaacttgactctcctccatttgatatactcttcttaccacagcatctacgggtcttctctctacatgcccaaactatctaagcttattttctatcaa 20192057  T
Q  187 cttttctactata 199  Q
    |||||||||||||    
T  20192056 cttttctactata 20192044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 87 - 199
Target Start/End: Original strand, 20601805 - 20601917
Alignment:
Q  87 ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaa 186  Q
    |||| ||| ||||||||||||| | || |||||||||||||||| ||||||| | |||||||||||||||  |||||||||||  |||||||||||||||    
T  20601805 ttttgacctgactctcctccatcttatatactcttcttacaacggcatctacaggtcttctctctacatgcacaaaccatctaatcctattttctaccaa 20601904  T
Q  187 cttttctactata 199  Q
    |||||||||||||    
T  20601905 cttttctactata 20601917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 63 - 197
Target Start/End: Complemental strand, 39708581 - 39708446
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | |||| ||| ||||||||||||| ||||||||||||||||| ||| |||||| |  |||||||| ||||||  |||    
T  39708581 gttttcctaggtcttcctctacctcttttgacctgactctcctccatctgatctactcttcttacgacggcatctatgtgtcttctctatacatgctcaa 39708482  T
Q  162 accatctatgcctattttctaccaacttttctacta 197  Q
    |||||||| ||||||||||||||||||||| |||||    
T  39708481 accatctaagcctattttctaccaacttttatacta 39708446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 96 - 186
Target Start/End: Complemental strand, 8286545 - 8286455
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaa 186  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||| ||||||||||||||| | |||||||||| ||||||||||||||||    
T  8286545 gactctcctccatttcatctactcttcttacgacggcatctacgggtcttctctctacatgcctaaaccatctaagcctattttctaccaa 8286455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 26037664 - 26037778
Alignment:
Q  87 ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaa 186  Q
    |||||||| ||||||||||||| ||||||||||||||||| ||| ||| ||| | ||||||||||| |    ||||||||||| ||||||||||||||||    
T  26037664 ttttaacctgactctcctccatctgatctactcttcttacgacggcatttacaggtcttctctctataatatcaaaccatctaagcctattttctaccaa 26037763  T
Q  187 cttttctactatagg 201  Q
    |||||||||||||||    
T  26037764 cttttctactatagg 26037778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 1793570 - 1793469
Alignment:
Q  100 ctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactata 199  Q
    ||||||||| ||||||||| ||||||| |||||||| ||   |||||||||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  1793570 ctcctccatctgatctactattcttacgacgacatcaacaagtcttctctctacatgtccaaaccatctaagcttattttctaccaacttttttactata 1793471  T
Q  200 gg 201  Q
    ||    
T  1793470 gg 1793469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 20591469 - 20591571
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    ||||||||||||| |||| ||||||||||||| ||||||||| |  ||||||||||||||| ||||||||||||  | ||||||||||||||||||||||    
T  20591469 gactctcctccatctgatatactcttcttaca-cgacatctatgagtcttctctctacatgcccaaaccatctaatcttattttctaccaacttttctac 20591567  T
Q  196 tata 199  Q
    ||||    
T  20591568 tata 20591571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 47265329 - 47265475
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacgga-------tcttctctctaca 154  Q
    |||||| |||||||| |||||| | |||||||  || ||||||||||||  |||||||||||||| ||| ||||||||||       |||||||||||||    
T  47265329 gttttcctaggtcttcctctacctcttttaactagaatctcctccatttagtctactcttcttacgacggcatctacggactacgtgtcttctctctaca 47265428  T
Q  155 tgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    || ||||| ||||||  |||||||||||| | |||||||||||||||    
T  47265429 tgcccaaatcatctaaacctattttctactaccttttctactatagg 47265475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 31459098 - 31459039
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||| |||||||| ||| ||||||||||||||| |||||||||||||||    
T  31459098 tcttctctttacatgcccaaaccacctaagcctattttctaccatcttttctactatagg 31459039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 25755425 - 25755347
Alignment:
Q  102 cctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttc 180  Q
    ||||||||||||||||||| ||||||||   |||||  | ||||| |||||| ||||||||||||||||||| ||||||    
T  25755425 cctccatttgatctactctacttacaacataatctataggtcttcgctctacgtgtccaaaccatctatgccgattttc 25755347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 156
Target Start/End: Complemental strand, 50679652 - 50679559
Alignment:
Q  63 gttttcttaggtctttctctacttttt-taacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatg 156  Q
    |||||| |||||||| |||||| | || ||||  ||||||||||||||| ||||||||||||||| | ||||||||| |||||||| ||||||||    
T  50679652 gttttcctaggtcttcctctacctcttctaacttgactctcctccatttaatctactcttcttacgatgacatctac-gatcttctttctacatg 50679559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 51421838 - 51421741
Alignment:
Q  102 cctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactata 199  Q
    ||||||||||||||||||||| ||  || |||||||| | |||||||| || ||| |||||||| ||| |||||||||||| || ||  |||||||||    
T  51421838 cctccatttgatctactcttcgtattacaacatctaccggtcttctctgtatatgcccaaaccacctaagcctattttctatcatctaatctactata 51421741  T

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Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 56225180 - 56225075
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    ||||||||||||| |||| |||||| | ||| || ||||||| |   |||||||||||||   ||||||| ||| ||||||||||||||| ||||| |||    
T  56225180 gactctcctccatatgatatactctacgtactacaacatctatgttccttctctctacatactcaaaccacctaagcctattttctaccatcttttatac 56225081  T
Q  196 tatagg 201  Q
    ||||||    
T  56225080 tatagg 56225075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 201
Target Start/End: Original strand, 20131165 - 20131272
Alignment:
Q  94 ccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatg-tccaaaccatctatgcctattttctaccaacttttc 192  Q
    ||||||||||||||||||||||||||||| ||| | ||| ||||||  |||||||| ||||||    ||| |||||| | |||||||||||| | |||||    
T  20131165 ccgactctcctccatttgatctactcttcatactatgacttctacgagtcttctctttacatgcaaaaaaacatctaagtctattttctacc-atttttc 20131263  T
Q  193 tactatagg 201  Q
    |||||||||    
T  20131264 tactatagg 20131272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 41009508 - 41009623
Alignment:
Q  87 ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttct-acca 185  Q
    |||| ||| ||||||||||||| ||||||| | ||||||| ||  |||| ||   |||||| ||||||||  ||||||||||| | ||||||| | ||||    
T  41009508 ttttgacctgactctcctccatctgatctatttttcttacgactgcatcaacatgtcttctttctacatgcacaaaccatctaagtctatttttttacca 41009607  T
Q  186 acttttctactatagg 201  Q
    ||||||||||||||||    
T  41009608 acttttctactatagg 41009623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 42639234 - 42639293
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||||||||||||||||||| ||| ||||  |||| |||| |||||||||||||||    
T  42639234 tcttctctctacatgtccaaaccacctaagcctggtttccaccatcttttctactatagg 42639293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 201
Target Start/End: Original strand, 1211556 - 1211665
Alignment:
Q  94 ccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgc--ctattttctaccaactttt 191  Q
    |||||||| |||||| ||||||||||||||||| || | |||||  | ||||||||||||||  ||||||||| || ||   ||||| |||||||||| |    
T  1211556 ccgactctactccatctgatctactcttcttacgacaatatctataggtcttctctctacattcccaaaccatttaagcatatatttcctaccaacttgt 1211655  T
Q  192 ctactatagg 201  Q
     |||||||||    
T  1211656 ttactatagg 1211665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 201
Target Start/End: Original strand, 7092388 - 7092493
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    ||||||| ||||| ||||||||||||| ||| |  ||||||||   ||||||||||| ||| ||||||||  ||  ||||||||||| ||  ||||||||    
T  7092388 gactctcatccatctgatctactcttcatactataacatctacatgtcttctctctatatgcccaaaccacttaaacctattttctatcatattttctac 7092487  T
Q  196 tatagg 201  Q
    ||||||    
T  7092488 tatagg 7092493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 201
Target Start/End: Complemental strand, 16003032 - 16002936
Alignment:
Q  104 tccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||| |||| ||| |||||||  ||| ||||||||| ||||||||||| |||| | ||||||||| | |||||||||| |||||||| ||| |||||    
T  16003032 tccatctgatttacccttcttatgacggcatctacgggtcttctctctaaatgttc-aaccatctaagactattttctatcaacttttataccatagg 16002936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 44047568 - 44047621
Alignment:
Q  148 ctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||||||||||||| ||| |||||  |||||||| |||||||||||||||    
T  44047568 ctctacatgtccaaaccacctaagcctagattctaccaccttttctactatagg 44047621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 47611841 - 47611741
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctac 195  Q
    ||||||||||||| |||| |||||| ||||  || | ||||   | ||||||||||||||| |||||||| ||| |||||||||| | || |||||||||    
T  47611841 gactctcctccatctgatttactctccttattacaaaatctctaggtcttctctctacatgcccaaaccacctaagcctattttccatcatcttttctac 47611742  T
Q  196 t 196  Q
    |    
T  47611741 t 47611741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 166 - 201
Target Start/End: Complemental strand, 12494794 - 12494759
Alignment:
Q  166 tctatgcctattttctaccaacttttctactatagg 201  Q
    |||| |||||||||||||||||||||||||||||||    
T  12494794 tctaagcctattttctaccaacttttctactatagg 12494759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 26356687 - 26356628
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||||||  || |||||||| ||| | ||||||||||||| |||||||||||||||    
T  26356687 tcttctctctaagtgcccaaaccacctaagtctattttctaccatcttttctactatagg 26356628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 35555861 - 35555920
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||||||| ||| |||||||| ||| | ||| ||||||||| |||||||||||||||    
T  35555861 tcttctctctaaatgcccaaaccacctaagtctagtttctaccatcttttctactatagg 35555920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 22420889 - 22420983
Alignment:
Q  103 ctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctacta 197  Q
    |||||| | ||||||||||||||  || | |||| | ||||||||||||||||||||||| || ||| |||||  ||| |||| |||||| ||||    
T  22420889 ctccatcttatctactcttcttattacaaaatcttcagatcttctctctacatgtccaaatcacctaagcctagcttccaccatcttttccacta 22420983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 200
Target Start/End: Original strand, 42285914 - 42285972
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatag 200  Q
    |||||||| |||||| |||||||| ||| | ||| ||||||||| ||||||||||||||    
T  42285914 tcttctctatacatgcccaaaccacctaagtctagtttctaccatcttttctactatag 42285972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 49987487 - 49987437
Alignment:
Q  151 tacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||| |||||||| ||| |||||||||| |||| |||||||||||||||    
T  49987487 tacatgaccaaaccacctaagcctattttccaccatcttttctactatagg 49987437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 1427466 - 1427555
Alignment:
Q  110 tgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactata 199  Q
    ||||||||||| ||||| || | ||| || | || ||||||||||||  ||||||||||| ||||| |||| ||||  ||||||||||||    
T  1427466 tgatctactctccttaccacaaaatccacaggtcctctctctacatgctcaaaccatctaagcctagtttccaccatgttttctactata 1427555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 50662497 - 50662396
Alignment:
Q  101 tcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaa-ccatctatgcctattttctaccaacttttctactata 199  Q
    |||| |||| |||||||||| |||||||    ||||||   ||||||||||||||| ||||| ||| ||| ||||| |||| |||| |||||||||||||    
T  50662497 tccttcattagatctactctccttacaatagaatctacaagtcttctctctacatgcccaaaaccacctaagcctactttccaccatcttttctactata 50662398  T
Q  200 gg 201  Q
    ||    
T  50662397 gg 50662396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 197
Target Start/End: Complemental strand, 28497598 - 28497503
Alignment:
Q  101 tcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctacta 197  Q
    |||||||| ||||||||||| ||||| ||   ||||||   ||||||||||||||| |||||||| ||| |||| ||||| || | |||||||||||    
T  28497598 tcctccatctgatctactctccttactacataatctacaagtcttctctctacatgcccaaaccacctaagcct-ttttccacaatcttttctacta 28497503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 53518495 - 53518571
Alignment:
Q  103 ctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctatttt 179  Q
    |||||| ||||||||||||| ||| ||  |||| || | ||||||||||||||  |||||||| ||| |||||||||    
T  53518495 ctccatctgatctactcttcgtactacagcatccacaggtcttctctctacatacccaaaccacctaagcctatttt 53518571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 1082 - 1221
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| |||||||| |||||| | ||||||   |||||| |||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  1082 gttttcctaggtcttcctctacctcttttaatttgactcttctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatggccaa 1181  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  1182 accatctaagcctattttctaccaacttttctactatagg 1221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 84; Significance: 4e-40; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 63 - 201
Target Start/End: Complemental strand, 31616 - 31477
Alignment:
Q  63 gttttcttaggtctttctctactt-ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaa 161  Q
    |||||| | |||||| |||||| | |||||||  ||||||||||||||||||||||||||||||| | | ||||||||| ||||||||||||||| ||||    
T  31616 gttttcctgggtcttcctctacatcttttaacttgactctcctccatttgatctactcttcttaccatggcatctacgggtcttctctctacatgcccaa 31517  T
Q  162 accatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  31516 accatctaagcctattttctaccaacttttctactatagg 31477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 44082 - 44141
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    ||||||||||||||| |||||||| ||| ||||||||||  ||| |||||||||||||||    
T  44082 tcttctctctacatgcccaaaccacctaagcctattttccgccatcttttctactatagg 44141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 87 - 196
Target Start/End: Original strand, 86768 - 86877
Alignment:
Q  87 ttttaacccgactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaa 186  Q
    |||||||| ||||||||||||||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||||| ||||| | ||||||||||||||    
T  86768 ttttaacctgactctcctccatttgatctactcttcttacgacggcatctacgggtcttctctttacatgtccaaactatctaagactattttctaccaa 86867  T
Q  187 cttttctact 196  Q
    ||||||||||    
T  86868 cttttctact 86877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 97 - 201
Target Start/End: Complemental strand, 82834 - 82730
Alignment:
Q  97 actctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctact 196  Q
    ||||||||||||||||| ||| |||||||| ||  |||||| |||||||||||||| ||||||||| |||||| ||| ||||||||||||||||||||||    
T  82834 actctcctccatttgatatacccttcttacgactgcatctatggatcttctctctatatgtccaaatcatctaagcccattttctaccaacttttctact 82735  T
Q  197 atagg 201  Q
    |||||    
T  82734 atagg 82730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 4442 - 4544
Alignment:
Q  99 tctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactat 198  Q
    |||||||||||||||||||||||||||| ||  | ||||||  |||||| |||||||| |||||| ||||| ||||||||| ||||||||||||||||||    
T  4442 tctcctccatttgatctactcttcttaccacagcttctacgagtcttctttctacatgcccaaactatctaagcctattttttaccaacttttctactat 4541  T
Q  199 agg 201  Q
    |||    
T  4542 agg 4544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 11810 - 11869
Alignment:
Q  142 tcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
    |||||| |||||||| ||||| |||||| |||||||||||||||||||||||||||||||    
T  11810 tcttctgtctacatgcccaaatcatctaagcctattttctaccaacttttctactatagg 11869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 11715 - 11787
Alignment:
Q  96 gactctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatct 168  Q
    ||||||| ||||||||||||||||||||||  ||| ||||||||| ||||| ||||||||| ||||| |||||    
T  11715 gactctcatccatttgatctactcttcttatgacggcatctacgggtcttcgctctacatgcccaaatcatct 11787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 7554 - 7455
Alignment:
Q  97 actctcctccatttgatctactcttcttacaacgacatctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctact 196  Q
    |||||||||||| |||| |||||||||||  | |||||||||    |||||||||||||| |||||||| ||| || | |||||||| ||||||| ||||    
T  7554 actctcctccatctgatatactcttcttatgaagacatctacatgccttctctctacatgcccaaaccaactaagcgtgttttctacaaacttttgtact 7455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 4749 - 4704
Alignment:
Q  97 actctcctccatttgatctactcttcttacaacgacatctacggat 142  Q
    |||||||||||| ||||||||||||||||| ||| |||||||||||    
T  4749 actctcctccatctgatctactcttcttacgacggcatctacggat 4704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 166 - 201
Target Start/End: Original strand, 25683 - 25718
Alignment:
Q  166 tctatgcctattttctaccaacttttctactatagg 201  Q
    |||| |||||||||||||||||||||||||||||||    
T  25683 tctaagcctattttctaccaacttttctactatagg 25718  T

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Target: scaffold0325 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 11873 - 11807
Alignment:
Q  135 ctacggatcttctctctacatgtccaaaccatctatgcctattttctaccaacttttctactatagg 201  Q
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T  11873 ctacagatcttctctctacatgcccaaaccacctaagccgagttcctaccatcttttctacaatagg 11807  T

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