View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6218_high_7 (Length: 285)
Name: NF6218_high_7
Description: NF6218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6218_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 28 - 277
Target Start/End: Complemental strand, 6254601 - 6254352
Alignment:
| Q |
28 |
ttgacagaaccagttagtgtttatagatattggaaggaataacgaccaatctcatttccaaaatatgatccaaaacaattgggaatcattacaccaccct |
127 |
Q |
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| T |
6254601 |
ttgacagaaccagttagtgtttatagatattggaaagaataacgaccaatctcatttccaaaatctgatccaaaacaattgggaatcattacaccaccgt |
6254502 |
T |
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| Q |
128 |
ggataaaagtataacgtgacaaattattaaactgaaacaaacatgcgacagaaagacaatgaatnnnnnnntaggaaacttaaaactaacacaatcaaac |
227 |
Q |
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| T |
6254501 |
ggataaaagtataacgtgacaaattattaaactgaaacaaacatgcgacagaaagacaatgaataaaaaatgaggaaacttaaaactaacacaatcaaac |
6254402 |
T |
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| Q |
228 |
tcatattccacagcgtaggttatgtactgcacacgcagggaattgatgat |
277 |
Q |
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| T |
6254401 |
tcatattccacatcgtaggttatgtacttcacacgcagggaattgatgat |
6254352 |
T |
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