View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6218_low_1 (Length: 704)

Name: NF6218_low_1
Description: NF6218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6218_low_1
NF6218_low_1
[»] chr5 (62 HSPs)
chr5 (63-299)||(14015627-14015862)
chr5 (306-475)||(39690705-39690875)
chr5 (306-475)||(32707773-32707943)
chr5 (306-456)||(30777482-30777634)
chr5 (309-475)||(41392654-41392821)
chr5 (306-475)||(33829759-33829925)
chr5 (306-475)||(32624883-32625053)
chr5 (306-450)||(1639750-1639894)
chr5 (308-450)||(26716281-26716424)
chr5 (308-450)||(26986021-26986164)
chr5 (306-440)||(30918384-30918519)
chr5 (307-451)||(30284573-30284718)
chr5 (301-475)||(26794946-26795111)
chr5 (306-450)||(9792325-9792470)
chr5 (306-450)||(1795398-1795544)
chr5 (306-450)||(26691622-26691767)
chr5 (306-450)||(26961354-26961499)
chr5 (308-429)||(11906226-11906349)
chr5 (307-450)||(32728676-32728820)
chr5 (306-440)||(10656826-10656960)
chr5 (564-682)||(33830015-33830134)
chr5 (306-450)||(17138221-17138365)
chr5 (310-450)||(3934754-3934896)
chr5 (564-682)||(12852364-12852483)
chr5 (566-682)||(26794738-26794855)
chr5 (566-682)||(30918608-30918725)
chr5 (564-682)||(1639527-1639646)
chr5 (306-440)||(12852125-12852249)
chr5 (301-442)||(5612417-5612560)
chr5 (301-442)||(5721988-5722130)
chr5 (309-442)||(14836390-14836521)
chr5 (308-410)||(22774562-22774664)
chr5 (309-442)||(34032378-34032512)
chr5 (310-456)||(15066148-15066297)
chr5 (564-682)||(9792555-9792669)
chr5 (564-672)||(10657096-10657205)
chr5 (310-449)||(42366075-42366211)
chr5 (322-426)||(5986060-5986164)
chr5 (307-456)||(6243128-6243269)
chr5 (307-442)||(27938170-27938302)
chr5 (345-450)||(43357726-43357832)
chr5 (342-460)||(9653807-9653927)
chr5 (317-420)||(21251482-21251585)
chr5 (334-440)||(1920870-1920976)
chr5 (301-452)||(7629070-7629211)
chr5 (375-440)||(7977316-7977382)
chr5 (566-682)||(5985821-5985938)
chr5 (309-398)||(41233388-41233477)
chr5 (301-450)||(18001932-18002068)
chr5 (565-633)||(39690263-39690332)
chr5 (335-419)||(3701233-3701317)
chr5 (564-631)||(7977493-7977561)
chr5 (342-418)||(12190427-12190503)
chr5 (307-398)||(35746271-35746362)
chr5 (564-631)||(32625139-32625207)
chr5 (357-443)||(19102439-19102526)
chr5 (344-443)||(35618113-35618213)
chr5 (564-629)||(41392508-41392569)
chr5 (375-434)||(22737916-22737974)
chr5 (345-419)||(27085409-27085483)
chr5 (301-338)||(22737857-22737894)
chr5 (7-35)||(14015861-14015889)
[»] chr6 (32 HSPs)
chr6 (310-475)||(31195811-31195977)
chr6 (306-475)||(1036768-1036938)
chr6 (309-475)||(8356967-8357134)
chr6 (306-440)||(3212483-3212618)
chr6 (309-450)||(32017986-32018127)
chr6 (306-450)||(32130626-32130771)
chr6 (306-450)||(26327161-26327305)
chr6 (306-437)||(25834476-25834608)
chr6 (564-682)||(1036561-1036680)
chr6 (306-450)||(7188746-7188888)
chr6 (306-440)||(27083991-27084125)
chr6 (310-450)||(19128163-19128304)
chr6 (306-449)||(234312-234459)
chr6 (565-682)||(7188525-7188643)
chr6 (565-682)||(31740559-31740677)
chr6 (301-455)||(3299141-3299298)
chr6 (306-450)||(6708008-6708153)
chr6 (309-442)||(11105295-11105429)
chr6 (309-450)||(13607752-13607894)
chr6 (564-682)||(32130402-32130521)
chr6 (307-450)||(31741135-31741267)
chr6 (301-381)||(29892966-29893047)
chr6 (315-433)||(22989319-22989437)
chr6 (315-433)||(23798960-23799078)
chr6 (307-360)||(31079619-31079672)
chr6 (306-398)||(13061325-13061417)
chr6 (301-417)||(10894584-10894690)
chr6 (308-371)||(7254938-7255001)
chr6 (443-475)||(7188731-7188763)
chr6 (564-607)||(8357213-8357257)
chr6 (376-420)||(10894519-10894563)
chr6 (373-450)||(31079674-31079753)
[»] chr8 (62 HSPs)
chr8 (306-475)||(22201279-22201449)
chr8 (308-474)||(32759381-32759548)
chr8 (306-475)||(16384623-16384793)
chr8 (306-475)||(34901324-34901494)
chr8 (306-475)||(28876507-28876678)
chr8 (306-475)||(13422214-13422384)
chr8 (306-475)||(43771646-43771816)
chr8 (306-475)||(12580495-12580665)
chr8 (306-440)||(32877443-32877578)
chr8 (306-440)||(2872888-2873022)
chr8 (306-450)||(36483441-36483586)
chr8 (306-440)||(6028493-6028628)
chr8 (309-475)||(19947939-19948105)
chr8 (306-450)||(4245946-4246091)
chr8 (306-450)||(45217187-45217332)
chr8 (310-440)||(25022135-25022266)
chr8 (307-449)||(32424928-32425071)
chr8 (306-440)||(5818288-5818423)
chr8 (564-682)||(34901116-34901235)
chr8 (564-682)||(4246181-4246300)
chr8 (309-450)||(32638833-32638965)
chr8 (564-682)||(43771439-43771558)
chr8 (306-450)||(37668588-37668733)
chr8 (564-682)||(45216967-45217086)
chr8 (307-417)||(37372266-37372376)
chr8 (566-682)||(28876312-28876429)
chr8 (574-682)||(32638682-32638791)
chr8 (564-682)||(36483689-36483803)
chr8 (564-682)||(5539674-5539793)
chr8 (306-442)||(27886196-27886333)
chr8 (306-442)||(27944854-27944991)
chr8 (301-450)||(29355623-29355775)
chr8 (306-442)||(38388673-38388810)
chr8 (306-452)||(27968109-27968258)
chr8 (306-452)||(28025095-28025244)
chr8 (564-682)||(12580273-12580387)
chr8 (307-382)||(19436281-19436356)
chr8 (307-382)||(19572430-19572505)
chr8 (301-443)||(12357889-12358023)
chr8 (301-443)||(12359017-12359151)
chr8 (299-431)||(42949136-42949262)
chr8 (301-417)||(5539436-5539541)
chr8 (306-450)||(20182380-20182524)
chr8 (564-682)||(37668835-37668948)
chr8 (310-443)||(23265659-23265788)
chr8 (310-371)||(40412445-40412506)
chr8 (309-443)||(17702504-17702639)
chr8 (564-682)||(19947719-19947838)
chr8 (565-669)||(32877712-32877812)
chr8 (394-456)||(40412508-40412571)
chr8 (306-442)||(32687-32812)
chr8 (317-443)||(30804724-30804846)
chr8 (307-371)||(7411643-7411707)
chr8 (564-682)||(6028745-6028864)
chr8 (378-456)||(8171200-8171278)
chr8 (368-450)||(24100160-24100243)
chr8 (310-443)||(10349254-10349388)
chr8 (576-682)||(25022417-25022528)
chr8 (564-681)||(19436507-19436625)
chr8 (564-681)||(19572656-19572774)
chr8 (306-413)||(3891968-3892075)
chr8 (443-475)||(4246074-4246106)
[»] chr4 (57 HSPs)
chr4 (306-475)||(19738703-19738873)
chr4 (306-475)||(8064051-8064221)
chr4 (306-475)||(5325663-5325833)
chr4 (306-475)||(52122811-52122981)
chr4 (306-475)||(53322343-53322513)
chr4 (301-450)||(52721265-52721415)
chr4 (307-450)||(5834837-5834981)
chr4 (306-475)||(28377002-28377172)
chr4 (306-450)||(42472536-42472681)
chr4 (306-450)||(41145618-41145764)
chr4 (564-682)||(8063842-8063961)
chr4 (301-449)||(46431901-46432050)
chr4 (310-475)||(3403528-3403683)
chr4 (306-442)||(36511908-36512046)
chr4 (306-450)||(40694076-40694221)
chr4 (306-450)||(38492236-38492371)
chr4 (311-452)||(37992497-37992640)
chr4 (387-475)||(52572276-52572364)
chr4 (564-682)||(3403319-3403438)
chr4 (566-682)||(31226594-31226711)
chr4 (306-452)||(2586342-2586489)
chr4 (564-682)||(5325458-5325577)
chr4 (566-682)||(52572451-52572563)
chr4 (310-443)||(21058843-21058979)
chr4 (306-442)||(55901114-55901251)
chr4 (564-682)||(14795261-14795380)
chr4 (366-456)||(39957630-39957721)
chr4 (306-417)||(47607116-47607226)
chr4 (307-442)||(17892255-17892391)
chr4 (306-450)||(1176987-1177128)
chr4 (574-682)||(41145877-41145986)
chr4 (566-682)||(53322596-53322713)
chr4 (376-451)||(14795078-14795154)
chr4 (309-439)||(4400477-4400608)
chr4 (308-442)||(3109280-3109415)
chr4 (564-682)||(5835085-5835204)
chr4 (306-360)||(14795029-14795083)
chr4 (309-443)||(27981905-27982039)
chr4 (306-399)||(51858838-51858931)
chr4 (391-450)||(31226044-31226104)
chr4 (373-443)||(21637738-21637809)
chr4 (376-450)||(31946193-31946268)
chr4 (310-381)||(44121879-44121950)
chr4 (308-360)||(31946263-31946315)
chr4 (311-399)||(44521996-44522084)
chr4 (565-631)||(19738954-19739021)
chr4 (366-442)||(42630459-42630537)
chr4 (377-442)||(24793706-24793772)
chr4 (306-371)||(10257706-10257771)
chr4 (565-631)||(42472373-42472440)
chr4 (417-454)||(24784357-24784394)
chr4 (375-442)||(36943744-36943812)
chr4 (389-443)||(49069269-49069324)
chr4 (632-682)||(28377221-28377271)
chr4 (307-381)||(51674865-51674939)
chr4 (443-475)||(38492221-38492253)
chr4 (443-475)||(42472521-42472553)
[»] chr2 (56 HSPs)
chr2 (306-475)||(7876720-7876890)
chr2 (306-475)||(16561806-16561976)
chr2 (306-475)||(40308839-40309009)
chr2 (306-475)||(7807316-7807486)
chr2 (306-475)||(33324824-33324994)
chr2 (306-475)||(38602264-38602434)
chr2 (306-475)||(6124179-6124349)
chr2 (301-475)||(18300972-18301148)
chr2 (307-440)||(4170479-4170613)
chr2 (301-475)||(22570937-22571114)
chr2 (306-450)||(22484273-22484418)
chr2 (306-440)||(6497626-6497761)
chr2 (308-450)||(4355333-4355476)
chr2 (306-452)||(8482882-8483029)
chr2 (307-442)||(34146187-34146323)
chr2 (310-450)||(4561798-4561940)
chr2 (564-682)||(6124441-6124560)
chr2 (306-450)||(35342323-35342469)
chr2 (306-450)||(1776403-1776548)
chr2 (306-450)||(2319281-2319426)
chr2 (306-450)||(45159276-45159410)
chr2 (306-442)||(44156603-44156741)
chr2 (306-450)||(28746623-28746764)
chr2 (308-450)||(35996651-35996793)
chr2 (306-450)||(31236153-31236298)
chr2 (307-450)||(14217117-14217265)
chr2 (564-682)||(40308583-40308701)
chr2 (310-439)||(21104492-21104622)
chr2 (564-682)||(4170260-4170374)
chr2 (564-682)||(6497410-6497524)
chr2 (306-421)||(24585536-24585650)
chr2 (309-442)||(1005522-1005655)
chr2 (564-682)||(22484520-22484640)
chr2 (317-443)||(40497363-40497486)
chr2 (564-682)||(18301237-18301356)
chr2 (306-450)||(20536781-20536916)
chr2 (310-433)||(25933575-25933699)
chr2 (308-452)||(3545545-3545691)
chr2 (309-408)||(43214581-43214682)
chr2 (309-417)||(37134299-37134407)
chr2 (368-450)||(3563908-3563991)
chr2 (311-439)||(12206036-12206164)
chr2 (306-450)||(14824154-14824290)
chr2 (564-682)||(5371217-5371336)
chr2 (566-682)||(12819459-12819576)
chr2 (564-631)||(16562064-16562132)
chr2 (565-631)||(7876970-7877037)
chr2 (307-401)||(5588114-5588208)
chr2 (310-440)||(9293129-9293256)
chr2 (564-629)||(22571205-22571266)
chr2 (564-682)||(20536980-20537098)
chr2 (306-340)||(3563857-3563891)
chr2 (403-451)||(5371057-5371106)
chr2 (301-353)||(12819301-12819354)
chr2 (366-399)||(14824274-14824307)
chr2 (310-371)||(40536252-40536313)
[»] chr1 (70 HSPs)
chr1 (306-475)||(37104126-37104296)
chr1 (306-475)||(28949183-28949353)
chr1 (306-475)||(6916816-6916986)
chr1 (306-475)||(38330433-38330603)
chr1 (306-475)||(52895655-52895825)
chr1 (310-475)||(1036469-1036635)
chr1 (306-475)||(1043233-1043403)
chr1 (306-475)||(3426854-3427024)
chr1 (307-475)||(38948739-38948908)
chr1 (306-450)||(20409521-20409666)
chr1 (309-475)||(36367644-36367801)
chr1 (306-450)||(30323721-30323867)
chr1 (306-440)||(37346825-37346960)
chr1 (301-440)||(31653379-31653520)
chr1 (306-440)||(43189661-43189796)
chr1 (307-440)||(8132190-8132324)
chr1 (310-450)||(13012959-13013100)
chr1 (309-450)||(28659267-28659409)
chr1 (564-682)||(3427114-3427233)
chr1 (306-444)||(5984233-5984372)
chr1 (564-682)||(6916609-6916728)
chr1 (564-682)||(8132424-8132543)
chr1 (564-682)||(38330691-38330810)
chr1 (564-682)||(52895448-52895567)
chr1 (310-450)||(29167957-29168098)
chr1 (301-450)||(9781642-9781793)
chr1 (306-452)||(48715190-48715337)
chr1 (309-450)||(25256625-25256766)
chr1 (564-682)||(28659053-28659172)
chr1 (308-452)||(14167092-14167239)
chr1 (307-435)||(34432365-34432494)
chr1 (564-682)||(25256867-25256986)
chr1 (564-682)||(30323971-30324089)
chr1 (309-443)||(40776004-40776139)
chr1 (306-442)||(3708254-3708391)
chr1 (309-440)||(2364686-2364818)
chr1 (308-440)||(10822410-10822545)
chr1 (564-682)||(5984438-5984557)
chr1 (306-440)||(32381036-32381171)
chr1 (306-450)||(41675956-41676101)
chr1 (306-450)||(33039619-33039763)
chr1 (306-450)||(34096520-34096664)
chr1 (301-439)||(14334172-14334300)
chr1 (307-399)||(2472873-2472965)
chr1 (307-442)||(10763668-10763797)
chr1 (314-450)||(9528810-9528943)
chr1 (564-682)||(13012733-13012852)
chr1 (564-682)||(31653159-31653278)
chr1 (307-452)||(24590089-24590226)
chr1 (301-452)||(38218399-38218536)
chr1 (566-682)||(14334415-14334532)
chr1 (350-450)||(24851524-24851625)
chr1 (564-682)||(37346699-37346818)
chr1 (309-439)||(15417462-15417592)
chr1 (306-442)||(29861807-29861940)
chr1 (565-633)||(28948741-28948810)
chr1 (307-440)||(37922274-37922407)
chr1 (309-417)||(2222980-2223088)
chr1 (310-443)||(41027920-41028053)
chr1 (344-443)||(5368584-5368684)
chr1 (395-443)||(12158806-12158854)
chr1 (564-631)||(20409316-20409384)
chr1 (564-682)||(43189899-43190018)
chr1 (378-443)||(9092466-9092533)
chr1 (401-443)||(8829702-8829745)
chr1 (564-619)||(38948992-38949043)
chr1 (309-449)||(4811974-4812114)
chr1 (307-348)||(24849371-24849412)
chr1 (443-475)||(20409506-20409538)
chr1 (324-360)||(47654706-47654742)
[»] chr7 (76 HSPs)
chr7 (306-475)||(27353924-27354094)
chr7 (306-475)||(40095653-40095823)
chr7 (306-475)||(48163411-48163581)
chr7 (306-475)||(11829692-11829862)
chr7 (306-475)||(26773654-26773824)
chr7 (306-475)||(34238161-34238331)
chr7 (301-475)||(27555311-27555487)
chr7 (306-456)||(25969400-25969552)
chr7 (306-475)||(16850789-16850959)
chr7 (306-475)||(38263002-38263172)
chr7 (311-456)||(9250381-9250529)
chr7 (301-447)||(26845866-26846013)
chr7 (309-450)||(34122584-34122726)
chr7 (306-440)||(1043048-1043183)
chr7 (306-475)||(47238559-47238719)
chr7 (564-682)||(40095911-40096030)
chr7 (306-450)||(42897005-42897139)
chr7 (307-452)||(44960100-44960246)
chr7 (306-450)||(36202755-36202890)
chr7 (306-438)||(19510526-19510659)
chr7 (566-682)||(39521026-39521143)
chr7 (310-442)||(21409398-21409530)
chr7 (301-440)||(27398024-27398165)
chr7 (306-442)||(33454073-33454210)
chr7 (306-450)||(39520803-39520937)
chr7 (307-452)||(35159869-35160015)
chr7 (564-682)||(11829954-11830068)
chr7 (564-681)||(36660722-36660838)
chr7 (311-446)||(11058360-11058494)
chr7 (375-472)||(16564325-16564422)
chr7 (375-472)||(16601240-16601337)
chr7 (344-440)||(8028738-8028835)
chr7 (314-450)||(23970093-23970230)
chr7 (306-450)||(4291515-4291649)
chr7 (314-443)||(18113913-18114043)
chr7 (306-399)||(23079059-23079152)
chr7 (564-682)||(19510767-19510886)
chr7 (376-451)||(36660551-36660626)
chr7 (309-442)||(24956257-24956391)
chr7 (309-450)||(40041385-40041526)
chr7 (306-450)||(44269729-44269873)
chr7 (306-418)||(38064598-38064710)
chr7 (373-440)||(47720149-47720217)
chr7 (310-443)||(8056305-8056438)
chr7 (317-420)||(23311736-23311839)
chr7 (306-449)||(554858-554992)
chr7 (566-682)||(8028953-8029070)
chr7 (564-672)||(26773452-26773560)
chr7 (309-443)||(1362985-1363121)
chr7 (309-443)||(49015044-49015175)
chr7 (564-682)||(16564098-16564216)
chr7 (306-353)||(16564423-16564470)
chr7 (306-353)||(16601192-16601239)
chr7 (564-682)||(16601446-16601564)
chr7 (309-387)||(48153620-48153698)
chr7 (625-682)||(1042925-1042982)
chr7 (378-450)||(21179911-21179984)
chr7 (346-426)||(2908231-2908311)
chr7 (564-631)||(26843777-26843845)
chr7 (391-449)||(19820901-19820960)
chr7 (310-417)||(30403903-30404010)
chr7 (565-631)||(34238409-34238476)
chr7 (309-371)||(35136065-35136127)
chr7 (310-360)||(36758054-36758104)
chr7 (310-360)||(36767578-36767628)
chr7 (564-655)||(4291809-4291901)
chr7 (376-424)||(38064738-38064786)
chr7 (346-450)||(1400235-1400347)
chr7 (378-443)||(7416689-7416755)
chr7 (377-450)||(26973127-26973201)
chr7 (379-443)||(31189375-31189442)
chr7 (366-399)||(40041510-40041543)
chr7 (307-339)||(21179861-21179893)
chr7 (439-475)||(26843935-26843971)
chr7 (564-607)||(27397864-27397908)
chr7 (443-475)||(39520920-39520952)
[»] chr3 (72 HSPs)
chr3 (306-475)||(37996753-37996923)
chr3 (306-475)||(40497336-40497506)
chr3 (301-475)||(25937006-25937181)
chr3 (306-475)||(52505775-52505944)
chr3 (306-450)||(7327718-7327863)
chr3 (306-450)||(35389756-35389901)
chr3 (307-450)||(28882645-28882789)
chr3 (306-440)||(48122831-48122966)
chr3 (306-474)||(22611327-22611486)
chr3 (306-475)||(28704733-28704903)
chr3 (306-475)||(22310711-22310881)
chr3 (306-451)||(52121186-52121332)
chr3 (306-450)||(1679665-1679810)
chr3 (306-440)||(42464884-42465019)
chr3 (301-475)||(10225104-10225269)
chr3 (307-475)||(1528509-1528667)
chr3 (306-450)||(28968516-28968661)
chr3 (306-450)||(13748415-13748559)
chr3 (307-450)||(52684208-52684352)
chr3 (306-450)||(55268983-55269124)
chr3 (301-449)||(6134350-6134500)
chr3 (308-444)||(22289694-22289831)
chr3 (307-450)||(41742039-41742183)
chr3 (306-457)||(2567358-2567499)
chr3 (308-450)||(7899685-7899829)
chr3 (310-443)||(30226430-30226563)
chr3 (564-682)||(28704991-28705110)
chr3 (310-440)||(42229684-42229815)
chr3 (564-682)||(52505568-52505687)
chr3 (566-682)||(10224896-10225013)
chr3 (566-682)||(42464678-42464795)
chr3 (564-682)||(1679443-1679562)
chr3 (564-682)||(48123078-48123198)
chr3 (306-440)||(53192504-53192629)
chr3 (301-442)||(21157704-21157847)
chr3 (308-439)||(983202-983335)
chr3 (307-442)||(45347306-45347441)
chr3 (342-440)||(33239992-33240091)
chr3 (342-440)||(45532957-45533056)
chr3 (310-450)||(19879070-19879201)
chr3 (306-452)||(30787526-30787674)
chr3 (349-450)||(19421465-19421567)
chr3 (319-450)||(25700779-25700912)
chr3 (306-418)||(2122710-2122825)
chr3 (318-443)||(3983715-3983842)
chr3 (306-398)||(29915867-29915959)
chr3 (306-398)||(29965020-29965112)
chr3 (309-450)||(20510123-20510265)
chr3 (564-669)||(25936818-25936924)
chr3 (566-682)||(28882423-28882540)
chr3 (301-397)||(38889101-38889197)
chr3 (308-450)||(47642025-47642157)
chr3 (310-443)||(5271489-5271612)
chr3 (311-450)||(47750856-47750997)
chr3 (308-371)||(13353233-13353296)
chr3 (564-682)||(22310985-22311104)
chr3 (564-682)||(35390005-35390124)
chr3 (306-356)||(19420911-19420961)
chr3 (310-360)||(49419245-49419295)
chr3 (564-682)||(50287090-50287208)
chr3 (564-682)||(52121418-52121536)
chr3 (310-450)||(39663968-39664107)
chr3 (564-631)||(53192743-53192811)
chr3 (339-397)||(45057253-45057311)
chr3 (339-443)||(15768966-15769071)
chr3 (307-371)||(19349637-19349701)
chr3 (306-369)||(21006534-21006597)
chr3 (347-402)||(13330944-13331001)
chr3 (377-442)||(25322447-25322513)
chr3 (441-475)||(35389882-35389916)
chr3 (443-475)||(1679650-1679682)
chr3 (443-475)||(7327846-7327878)
[»] scaffold0640 (1 HSPs)
scaffold0640 (306-475)||(8034-8204)
[»] scaffold0250 (2 HSPs)
scaffold0250 (306-450)||(5518-5663)
scaffold0250 (564-682)||(5786-5905)
[»] scaffold0060 (2 HSPs)
scaffold0060 (306-475)||(30386-30556)
scaffold0060 (566-682)||(30182-30299)
[»] scaffold0285 (1 HSPs)
scaffold0285 (307-438)||(13257-13388)
[»] scaffold0112 (2 HSPs)
scaffold0112 (306-450)||(42043-42177)
scaffold0112 (566-683)||(41821-41939)
[»] scaffold0037 (2 HSPs)
scaffold0037 (306-439)||(27769-27893)
scaffold0037 (566-682)||(27524-27646)
[»] scaffold0005 (3 HSPs)
scaffold0005 (564-682)||(44351-44470)
scaffold0005 (376-451)||(44577-44653)
scaffold0005 (306-360)||(44648-44702)
[»] scaffold0177 (1 HSPs)
scaffold0177 (306-440)||(25518-25642)
[»] scaffold0406 (2 HSPs)
scaffold0406 (375-450)||(13931-14003)
scaffold0406 (306-355)||(13872-13921)
[»] scaffold0240 (1 HSPs)
scaffold0240 (301-420)||(10600-10720)


Alignment Details
Target: chr5 (Bit Score: 221; Significance: 1e-121; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 63 - 299
Target Start/End: Complemental strand, 14015862 - 14015627
Alignment:
Q  63 taaaatcttgtatgtgcaattgtgcattctttgtctatcgcgcaataattttagcaatggtaaattgcttatattataaaatgagaaatgagtgcaataa 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14015862 taaaatcttgtatgtgcaattgtgcattctttgtctatcgcgcaataattttagcaatggtaaattgcttatattataaaatgagaaatgagtgcaataa 14015763  T
Q  163 gtctttcaaactccattatataaagtaaaagtacaaacaaaggacaaagtcgaacaatccaaaataaagggggatccgagaacaacctaaaataagggtc 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||    
T  14015762 gtctttcaaactccattatataaagtaaaagtacaaacaaaggacaaagtcgaacaatccaaaataaa-ggggatccgagaacaacctaaaacaaaggtc 14015664  T
Q  263 aacaacaaaacaagcggtccaacaaagtatgccacaa 299  Q
    |||||||||||||||||||||||||||||||||||||    
T  14015663 aacaacaaaacaagcggtccaacaaagtatgccacaa 14015627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 39690875 - 39690705
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| |||| |||||||||| |||||||||||||||||    
T  39690875 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggagagtatccaaatat 39690776  T
Q  406 taaattttatt-ttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  39690775 taaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacacacagatacttgtg 39690705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 32707943 - 32707773
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  32707943 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatat 32707844  T
Q  406 taaattttatt-ttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||| || |||||||||| ||||||||||    
T  32707843 taaattttatttttttaaaaaataattatctgatactttccgatacgtctcgatacgcacggatacttgtg 32707773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 306 - 456
Target Start/End: Complemental strand, 30777634 - 30777482
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  30777634 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatat 30777535  T
Q  406 taaattttatt--ttttaaaaaataattatccgatactttccgatacatcccg 456  Q
    |||||||||||  ||||| |||||||||||||||||||||||||||| |||||    
T  30777534 taaattttattttttttataaaataattatccgatactttccgatacgtcccg 30777482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 309 - 475
Target Start/End: Complemental strand, 41392821 - 41392654
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| ||||||||| ||||| || |||||||||||||||||    
T  41392821 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatatgtatccggggagtatccaaatattaa 41392722  T
Q  409 attttatttt-ttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||   |||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||    
T  41392721 attttattttaaaaaaaaataataatctgatactttccgatacatcccgatacgcacggatacttgtg 41392654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 33829759 - 33829925
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||  |||| |||| ||||||||||||||| |||||||||||||||||    
T  33829759 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacatgcctgatacttcccgatacgtatccggagagtatccaaatat 33829858  T
Q  406 taaattttattttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    |||||||| ||||||   ||||||||||||||||||||| ||||||||| | ||||||| ||||||||||    
T  33829859 taaattttttttttt---aaataattatccgatactttctgatacatcctggtacgcacggatacttgtg 33829925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 32624883 - 32625053
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||| |||||||||||||||||| |||||||| || ||||| |||| ||||| |||||||||| ||||||||||||||  | |||||||||||||||    
T  32624883 cccgatatttcaaaatggatgacgtaccgtatcccctgtgtatcttgcatcgatacctgcccgatacttcccgatacgtattcgaagagtatccaaatat 32624982  T
Q  406 taaatttta-ttttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||    
T  32624983 taaattttatttttttaaaaaataattatccgatactttccgatatatctcgatacgcacggatacttgtg 32625053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 306 - 450
Target Start/End: Complemental strand, 1639894 - 1639750
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| | |||||||||||||||    
T  1639894 cccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagtatccaaatat 1639795  T
Q  406 taaattttattttttaaaaaataattatccgatactttccgatac 450  Q
    |||||||||||||| |||||||||||||||||||| | |||||||    
T  1639794 taaattttatttttaaaaaaataattatccgatacgtcccgatac 1639750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 308 - 450
Target Start/End: Original strand, 26716281 - 26716424
Alignment:
Q  308 cgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatta 407  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||| | ||||||||| || ||||    
T  26716281 cgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctacaccgatacctgcctgatacttcccgatacgtatcagaagagtatccgaagatta 26716380  T
Q  408 aatttta-ttttttaaaaaataattatccgatactttccgatac 450  Q
    ||||||| |||||||||||||||||||||||||||| |||||||    
T  26716381 aattttatttttttaaaaaataattatccgatacttcccgatac 26716424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 308 - 450
Target Start/End: Original strand, 26986021 - 26986164
Alignment:
Q  308 cgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatta 407  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||| |||| ||||||||||||||| | ||||||||| || ||||    
T  26986021 cgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctacaccgatacctgcctgatacttcccgatacgtatcagaagagtatccgaagatta 26986120  T
Q  408 aatttta-ttttttaaaaaataattatccgatactttccgatac 450  Q
    ||||||| |||||||||||||||||||||||||||| |||||||    
T  26986121 aattttatttttttaaaaaataattatccgatacttcccgatac 26986164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 306 - 440
Target Start/End: Original strand, 30918384 - 30918519
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| ||||||||||||||  |||||||||| ||||||    
T  30918384 cccgatacttcaaaatggatgacgtattgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtattcggagagtatcaaaatat 30918483  T
Q  406 taaattttatt-ttttaaaaaataattatccgatac 440  Q
    ||| ||||||| ||||||||||||||||||||||||    
T  30918484 taatttttattgttttaaaaaataattatccgatac 30918519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 307 - 451
Target Start/End: Complemental strand, 30284718 - 30284573
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||| |||| ||||||||||||||| ||||||||||| || |||    
T  30284718 ccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcctgatacttcccgatacgtatcaggagagtatccgaagatt 30284619  T
Q  407 aaattttatttt-ttaaaaaataattatccgatactttccgataca 451  Q
    ||||||||||||   |||||||||||||||||||||| ||||||||    
T  30284618 aaattttattttaaaaaaaaataattatccgatacttcccgataca 30284573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 301 - 475
Target Start/End: Complemental strand, 26795111 - 26794946
Alignment:
Q  301 tgaagccc-gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcc 399  Q
    |||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||            || |||||||||||| |||||||||||    
T  26795111 tgaagccctgatactttaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatac-----------tttccgatacgtatccggagagtatcc 26795023  T
Q  400 aaatattaaattttattttttaa-aaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||| ||||||||||    
T  26795022 aaatattaaattttattttttaaaaaaataattatccgatacttttcgatacataccgatacgcacggatacttgtg 26794946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 9792325 - 9792470
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||| ||||||||||||||| |||||||| || |||||||||| ||||| |||||||||| |||||||||||||||  ||||||||||||||||    
T  9792325 cccgatactttaaaatggatgacgtaccgtatcccctgtgtatcctgcatcgatacctgcccgatacttcccgatacgtatccagagagtatccaaatat 9792424  T
Q  406 taaatttta-ttttttaaaaaataattatccgatactttccgatac 450  Q
    ||||||||| ||||||||||||||||||||| |||| | |||||||    
T  9792425 taaattttatttttttaaaaaataattatccaatacatcccgatac 9792470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 1795398 - 1795544
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||| |||||||||||||||| | ||||||||||||||||| |||||||||| || |||||||||||| | ||||||||| || ||    
T  1795398 cccgatacttcaaaatggttgacgtatcgtatcccctccgtatcctgcaccgatacctgcccgatactttccgatacgtatcagaagagtatccgaagat 1795497  T
Q  406 taaatttta--ttttttaaaaaataattatccgatactttccgatac 450  Q
    |||||||||  |||||| ||||||||||||||||||||| |||||||    
T  1795498 taaattttatttttttttaaaaataattatccgatacttcccgatac 1795544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 26691622 - 26691767
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||| |||||||||||||||||| ||||||| ||||||||||| ||| | |||| |||||||||||||||  |||||||||| || ||    
T  26691622 cccgatacttcaaaatagatgacgtatcgtatcccctgcgtattctgcaccgatacctgtctgatacttcccgatacgtatcaagagagtatccgaagat 26691721  T
Q  406 taaatttta-ttttttaaaaaataattatccgatactttccgatac 450  Q
    ||||||||| |||||| ||||||||||||||||||||| |||||||    
T  26691722 taaattttattttttttaaaaataattatccgatacttcccgatac 26691767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 26961354 - 26961499
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||| |||||||||||||||||| ||||||| ||||||||||| ||| | |||| |||||||||||||||  |||||||||| || ||    
T  26961354 cccgatacttcaaaatagatgacgtatcgtatcccctgcgtattctgcaccgatacctgtctgatacttcccgatacgtatcaagagagtatccgaagat 26961453  T
Q  406 taaatttta-ttttttaaaaaataattatccgatactttccgatac 450  Q
    ||||||||| |||||| ||||||||||||||||||||| |||||||    
T  26961454 taaattttattttttttaaaaataattatccgatacttcccgatac 26961499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 308 - 429
Target Start/End: Original strand, 11906226 - 11906349
Alignment:
Q  308 cgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatta 407  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||| |||||||    
T  11906226 cgatacttcaaaatggatgacgtattgtattccctgcgtatcctgcaccgatatctgtccgatacttcccgatacgtatccggagagtatccgaatatta 11906325  T
Q  408 aattttatttt--ttaaaaaataa 429  Q
    |||||||||||  |||||||||||    
T  11906326 aattttatttttcttaaaaaataa 11906349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 307 - 450
Target Start/End: Complemental strand, 32728820 - 32728676
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    ||||||||||||||| ||||| |||| ||||||| |||||||| |||| ||||| |||||||||| ||||||||||||||| ||||||||||||||||||    
T  32728820 ccgatacttcaaaattgatgatgtattgtatcccctgcgtatcttgcatcgatacctgcccgatacttcccgatacgtatccggagagtatccaaatatt 32728721  T
Q  407 aaattttattttttaa-aaaataattatccgatactttccgatac 450  Q
    | |||||||||||||| ||||||||||||| |||| | |||||||    
T  32728720 agattttattttttaaaaaaataattatccaatacgtcccgatac 32728676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 306 - 440
Target Start/End: Original strand, 10656826 - 10656960
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||| ||||||||||| |||||||||||||||||    
T  10656826 cccgatactttaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttctcgatacgtatcgggagagtatccaaatat 10656925  T
Q  406 taaattttattttttaaaaaataattatccgatac 440  Q
    ||| || | ||||| | ||||||||| || |||||    
T  10656926 taatttatttttttaagaaaataattttctgatac 10656960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 33830015 - 33830134
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||| ||||||| |||||||| |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||| ||    
T  33830015 cctttatctttctttggtgtcagtacgacccacaccacaccacacaaccaattgcatctttccctttctaagaaattagggtttcaactttttcttccaa 33830114  T
Q  663 agtggtcgccgtccactttg 682  Q
    ||||||||||||||||||||    
T  33830115 agtggtcgccgtccactttg 33830134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 306 - 450
Target Start/End: Complemental strand, 17138365 - 17138221
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||||||||||||  |||| |||| ||||||||||||||| ||||| ||||| || ||    
T  17138365 cccgatacttcaaaatagatgacgtat-gtatcccctgcgtatcctgcaccgataattgcctgatacttcccgatacgtatcaggagaatatccgaagat 17138267  T
Q  406 taaattttatt-ttttaaaaaataattatccgatactttccgatac 450  Q
    ||||||||||| ||||||||| |||||||| ||||||| |||||||    
T  17138266 taaattttatttttttaaaaagtaattatctgatacttcccgatac 17138221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 310 - 450
Target Start/End: Complemental strand, 3934896 - 3934754
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    |||||| ||||||||||||||||  |||||| ||||||||| ||||||||| || || |||| || |||||||||||| ||||||||||| || ||||||    
T  3934896 atactttaaaatggatgacgtattatatcccctgcgtatcccgcaccgatacctacctgatacttaccgatacgtatcaggagagtatccgaagattaaa 3934797  T
Q  410 ttttattttttaaaa--aataattatccgatactttccgatac 450  Q
    |||||||||||||||  ||||||||||| ||||||||||||||    
T  3934796 ttttattttttaaaaataataattatccaatactttccgatac 3934754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 12852364 - 12852483
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||| |||| |||||| |||||||| |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||| ||    
T  12852364 cctttatctttctttagtgctagtacgacccacaccacaccacacaaccaattgcatctttccctttctaagaaattagggtttcaactttttcttccaa 12852463  T
Q  663 agtggtcgccgtccactttg 682  Q
    ||||||||||||||||||||    
T  12852464 agtggtcgccgtccactttg 12852483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 566 - 682
Target Start/End: Complemental strand, 26794855 - 26794738
Alignment:
Q  566 tttatctatctttggtgccagtacggcccacaccca-ccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaag 664  Q
    ||||||| | ||||||||||||||| |||||||| | |||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||| ||||    
T  26794855 tttatctttatttggtgccagtacgacccacaccaaaccacacaaccaattgcatctttccctttctaagaaattagggtttcaactttttcttccaaag 26794756  T
Q  665 tggtcgccgtccactttg 682  Q
    ||||||||||||||||||    
T  26794755 tggtcgccgtccactttg 26794738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 566 - 682
Target Start/End: Original strand, 30918608 - 30918725
Alignment:
Q  566 tttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaag 664  Q
    ||||||| ||||||||||||||||| |||||||| ||||||||||||||||| || ||| ||||||||| ||||||||||||||||||||| |||  |||    
T  30918608 tttatctttctttggtgccagtacgacccacaccacaccacacaaccaattggatctttccctttctaagaaattagggtttcaactttttcttcctaag 30918707  T
Q  665 tggtcgccgtccactttg 682  Q
    ||||||||||||||||||    
T  30918708 tggtcgccgtccactttg 30918725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 1639646 - 1639527
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| |||||||||||||||||  ||||||| |||||||||| ||||||||| ||| ||||||||| ||||||||||||||| ||||| ||| ||    
T  1639646 cctttatctttctttggtgccagtacgatccacaccacaccacacaaacaattgcatctttccctttctaagaaattagggtttcaattttttcttccaa 1639547  T
Q  663 agtggtcgccgtccactttg 682  Q
    ||||||||||||||||||||    
T  1639546 agtggtcgccgtccactttg 1639527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 306 - 440
Target Start/End: Original strand, 12852125 - 12852249
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||            |||| |||||||||| |||||||||||||||||    
T  12852125 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatac-----------ttcctgatacgtatccggagagtatccaaatat 12852213  T
Q  406 taaatttta-ttttttaaaaaataattatccgatac 440  Q
    ||||||||| ||||||||||||||||||||||||||    
T  12852214 taaattttatttttttaaaaaataattatccgatac 12852249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 301 - 442
Target Start/End: Complemental strand, 5612560 - 5612417
Alignment:
Q  301 tgaagccc-gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcc 399  Q
    |||||||| ||||||||||||||||||||||||||||| |  || | ||||||||  |||| |||||||||| || | |||||||| | |||||||||||    
T  5612560 tgaagcccagatacttcaaaatggatgacgtatcgtattctctgtgcatcctgcattgataactgcccgatactttctgatacgtaccaggagagtatcc 5612461  T
Q  400 aaatattaaattttatt-ttttaaaaaataattatccgatactt 442  Q
     || ||||||||||||| ||||||||||||||||||||||||||    
T  5612460 gaagattaaattttatttttttaaaaaataattatccgatactt 5612417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 301 - 442
Target Start/End: Original strand, 5721988 - 5722130
Alignment:
Q  301 tgaagcccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcca 400  Q
    |||||||||||| || ||||| |||||||||||||||||| |||||||||||||| ||||  ||||||||| ||| | |||| |||| ||| |||||||     
T  5721988 tgaagcccgatattttaaaattgatgacgtatcgtatcccctgcgtatcctgcactgatacatgcccgatacttctcaatacatatcaggaaagtatccg 5722087  T
Q  401 aatattaaattttattttt-taaaaaataattatccgatactt 442  Q
    || ||||||||||||||||  |||||||||||||| |||||||    
T  5722088 aagattaaattttatttttaaaaaaaataattatctgatactt 5722130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 309 - 442
Target Start/End: Original strand, 14836390 - 14836521
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||| |||||| || ||||||||| |||||||||||| | ||||||||| ||||||||    
T  14836390 gatacttcaaaatggttgacgtattgtatcccctgcgtatcctgcatcgatatttgtccgatattttccgatacgtatcagaagagtatccgaatattaa 14836489  T
Q  409 attttattttttaaaaaataattatccgatactt 442  Q
      ||| |||||| | ||||||||||| |||||||    
T  14836490 --tttttttttttataaataattatctgatactt 14836521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 308 - 410
Target Start/End: Original strand, 22774562 - 22774664
Alignment:
Q  308 cgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatta 407  Q
    |||||||| ||||||| || ||||||||||||| ||| |||||||||||||||||||||||||| || ||||||||||||  ||||||||||||||||||    
T  22774562 cgatactttaaaatggttggcgtatcgtatcccctgcatatcctgcaccgatatctgcccgatactttccgatacgtatcgagagagtatccaaatatta 22774661  T
Q  408 aat 410  Q
    |||    
T  22774662 aat 22774664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 309 - 442
Target Start/End: Original strand, 34032378 - 34032512
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    ||||||||||||| ||||| |||||| |||||||||||||| |  ||||||| ||||  |||| ||||||||||||||| ||||||||||| || |||||    
T  34032378 gatacttcaaaatagatgatgtatcgaatcccttgcgtatcatctaccgatacctgcttgatacttcccgatacgtatcaggagagtatccgaagattaa 34032477  T
Q  409 attttatttttt-aaaaaataattatccgatactt 442  Q
     ||||||||||| |||||||||||||| |||||||    
T  34032478 tttttattttttaaaaaaataattatctgatactt 34032512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 310 - 456
Target Start/End: Original strand, 15066148 - 15066297
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    |||||||||||| ||||| |||||||||||| || |||| ||||||||||||||||||||||||| |||||||||||| | ||||||||  |  ||||||    
T  15066148 atacttcaaaatagatgatgtatcgtatcccatgtgtattctgcaccgatatctgcccgatattttccgatacgtatcggaagagtatcagatgattaaa 15066247  T
Q  410 ttttattt--tttaaaaaataattatccgatac-tttccgatacatcccg 456  Q
    ||||||||  |||  |||||||||||| ||||| ||| |||||| |||||    
T  15066248 ttttattttatttttaaaataattatctgatacgttttcgatacgtcccg 15066297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 9792555 - 9792669
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacccaccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaa 663  Q
    ||||||||| ||||||||| ||||||| ||||||||    ||||| | |||||||| ||| ||||||||| ||||||||||| ||||||||| ||| |||    
T  9792555 cctttatctttctttggtgtcagtacgacccacacc----acacagctaattgcatctttccctttctaagaaattagggttccaactttttcttccaaa 9792650  T
Q  664 gtggtcgccgtccactttg 682  Q
    |||||||||||||||||||    
T  9792651 gtggtcgccgtccactttg 9792669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 564 - 672
Target Start/End: Original strand, 10657096 - 10657205
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||||| |||||||| ||||||| || ||||| ||| ||  ||||||||||||||||||||||||||||||| ||| ||    
T  10657096 cctttatctttctttggtgccagtacgacccacaccacaccacagaaacaatttcatcttcccctttctaaaaaattagggtttcaactttttcttccaa 10657195  T
Q  663 agtggtcgcc 672  Q
    | ||||||||    
T  10657196 aatggtcgcc 10657205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 310 - 449
Target Start/End: Complemental strand, 42366211 - 42366075
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    |||||||||||| ||||| |||  ||||||| |||||||||||||| |||| |||||||||||||||| |||| |||| ||||| ||||| || |||||     
T  42366211 atacttcaaaatagatgatgtactgtatcccctgcgtatcctgcactgatacctgcccgatatttcccaatacctatcaggagaatatccgaagattaat 42366112  T
Q  410 ttttattttttaaaaaataattatccgatactttccgata 449  Q
    | |||||||||   |||||||||||| |||||| ||||||    
T  42366111 tattatttttt---aaataattatccaatacttcccgata 42366075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 322 - 426
Target Start/End: Complemental strand, 5986164 - 5986060
Alignment:
Q  322 ggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaattttatttttta 421  Q
    |||| |||||| ||||| | ||||||||||||| |||||| || |||||| || | |||||||||  |||||||||||||||||||||||||||||||||    
T  5986164 ggataacgtatggtatctcctgcgtatcctgcatcgatatatgtccgatactttctgatacgtattgggagagtatccaaatattaaattttatttttta 5986065  T
Q  422 aaaaa 426  Q
    |||||    
T  5986064 aaaaa 5986060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 307 - 456
Target Start/End: Complemental strand, 6243269 - 6243128
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    |||||||||||||||||||||||||| ||||||  |||||||||||||||||||            || |||||||||||| ||||||||||| ||||||    
T  6243269 ccgatacttcaaaatggatgacgtattgtatcctctgcgtatcctgcaccgatac-----------tttccgatacgtatccggagagtatccgaatatt 6243181  T
Q  407 aaattttattttt---taaaaaataattatccgatactttccgatacatcccg 456  Q
    |||||||||||||    ||||||||||||||||||| ||| |||||| |||||    
T  6243180 aaattttatttttaaaaaaaaaataattatccgatatttttcgatacgtcccg 6243128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 307 - 442
Target Start/End: Original strand, 27938170 - 27938302
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    |||||||||||||||||||||||||| ||||| | |||||||| ||||||||||  ||| |||||| |     |  ||||| | ||||||||| || |||    
T  27938170 ccgatacttcaaaatggatgacgtattgtatctcatgcgtatcatgcaccgatacatgctcgatatgt----gtcagtatcagaagagtatccgaagatt 27938265  T
Q  407 aaatttta-ttttttaaaaaataattatccgatactt 442  Q
    |||||||| ||||||||||||||||||||||||||||    
T  27938266 aaattttatttttttaaaaaataattatccgatactt 27938302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 345 - 450
Target Start/End: Complemental strand, 43357832 - 43357726
Alignment:
Q  345 gtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaattttatttttt-aaaaaataattatccgatacttt 443  Q
    |||||||||||||||| ||| | |||| || |||||||||||    ||||||||| || ||||||||||||||||| ||||||||||||||||||||||     
T  43357832 gtatcctgcaccgatacctgtctgatactttccgatacgtattaaaagagtatccgaagattaaattttatttttttaaaaaataattatccgatacttc 43357733  T
Q  444 ccgatac 450  Q
    |||||||    
T  43357732 ccgatac 43357726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 342 - 460
Target Start/End: Original strand, 9653807 - 9653927
Alignment:
Q  342 tgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaatttta-ttttttaaaaaataattatccgatac 440  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||| | |||||||   |  ||||||||||| |||||| |||||||||||||| ||||    
T  9653807 tgcgtattctgcaccgatatttgcccgatacttcccgatacgtatcggaagagtattggatgattaaattttattttttttaaaaataattatccaatac 9653906  T
Q  441 -tttccgatacatcccgatac 460  Q
     ||| |||||| |||||||||    
T  9653907 gtttacgatacttcccgatac 9653927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 317 - 420
Target Start/End: Original strand, 21251482 - 21251585
Alignment:
Q  317 aaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaattttatt 416  Q
    ||||||||||||||| |||||| | | | ||| ||||||| ||||||| | |||| || |||||||||||| ||||||||||| |||||||||||| |||    
T  21251482 aaaatggatgacgtaccgtatctcctacttattctgcaccaatatctgtctgatactttccgatacgtatcaggagagtatccgaatattaaatttaatt 21251581  T
Q  417 tttt 420  Q
    ||||    
T  21251582 tttt 21251585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 334 - 440
Target Start/End: Original strand, 1920870 - 1920976
Alignment:
Q  334 gtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaattttattttttaaaaaataattat 433  Q
    |||||| ||||||||| |||||||||||||||  |||| ||||||||||||||  ||||||||||| || ||||||||| ||||   |||||| ||||||    
T  1920870 gtatccattgcgtatcatgcaccgatatctgcatgatacttcccgatacgtattgggagagtatccgaagattaaatttcatttaaaaaaaaaaaattat 1920969  T
Q  434 ccgatac 440  Q
     ||||||    
T  1920970 tcgatac 1920976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 301 - 452
Target Start/End: Original strand, 7629070 - 7629211
Alignment:
Q  301 tgaagccc-gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcc 399  Q
    |||||||| ||||| |||||||||||||||||||||||||| |||||||| || || ||||            ||||||||||||||| ||||||||||     
T  7629070 tgaagccctgatacctcaaaatggatgacgtatcgtatcccctgcgtatcttgtactgatac-----------ttcccgatacgtatcaggagagtatct 7629158  T
Q  400 aaatattaaattttattttttaaaaaataattatccgatactttccgatacat 452  Q
     || |||||||||||||||  |||||| ||||||| ||||||| |||||||||    
T  7629159 gaagattaaattttattttgaaaaaaaaaattatctgatacttcccgatacat 7629211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 375 - 440
Target Start/End: Original strand, 7977316 - 7977382
Alignment:
Q  375 cccgatacgtatctggagagtatccaaatattaaatttta-ttttttaaaaaataattatccgatac 440  Q
    ||||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  7977316 cccgatacgtattcggagagtatctaaatattaaattttatttttttaaaaaataattatccgatac 7977382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 566 - 682
Target Start/End: Complemental strand, 5985938 - 5985821
Alignment:
Q  566 tttatctatctttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaag 664  Q
    ||||||| ||||||||||||||||| | ||||||  |||||| || ||||| ||| ||  ||||||| ||||||| ||||||||||||||| ||| |||     
T  5985938 tttatctttctttggtgccagtacgactcacaccataccacataaacaatttcatcttcccctttcttaaaaattggggtttcaactttttcttccaaaa 5985839  T
Q  665 tggtcgccgtccactttg 682  Q
    |||||||| |||||||||    
T  5985838 tggtcgccttccactttg 5985821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 309 - 398
Target Start/End: Original strand, 41233388 - 41233477
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatc 398  Q
    |||||||||||||||||||||||||||||  | | ||||||||||| |||||  || | |||| ||||||||||||||| ||||||||||    
T  41233388 gatacttcaaaatggatgacgtatcgtatttcctacgtatcctgcaacgatacatgtctgatacttcccgatacgtatcaggagagtatc 41233477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 301 - 450
Target Start/End: Complemental strand, 18002068 - 18001932
Alignment:
Q  301 tgaagcccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcca 400  Q
    |||||||| ||||||||||||||||||||||||||||||           |||| ||||| ||||   ||| |||||||||| |||| |||||||||       
T  18002068 tgaagccccatacttcaaaatggatgacgtatcgtatcc-----------tgcatcgatacctgc---atacttcccgatacatatcaggagagtatttg 18001983  T
Q  401 aatattaaattttatttttta-aaaaataattatccgatactttccgatac 450  Q
    || |||||||||||||||||  ||||||||||||| |||||||||||||||    
T  18001982 aagattaaattttattttttttaaaaataattatctgatactttccgatac 18001932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 565 - 633
Target Start/End: Complemental strand, 39690332 - 39690263
Alignment:
Q  565 ctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaa 633  Q
    |||||||| ||||||||||| ||||| |||||||| |||||||||||||||||||| ||| |||||||||    
T  39690332 ctttatctttctttggtgccggtacgacccacaccacaccacacaaccaattgcatctttccctttctaa 39690263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 335 - 419
Target Start/End: Original strand, 3701233 - 3701317
Alignment:
Q  335 tatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaattttattttt 419  Q
    |||||| ||||||||||||||||||||||| | |||| |||| |||| || || ||||||||||  || ||||||||||||||||    
T  3701233 tatcccctgcgtatcctgcaccgatatctgtctgatacttcctgatatgtttcaggagagtatctgaagattaaattttattttt 3701317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 564 - 631
Target Start/End: Original strand, 7977493 - 7977561
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttct 631  Q
    ||||||||| ||||||||||| ||||| |||||||| |||||||||||||||||||| ||| |||||||    
T  7977493 cctttatctttctttggtgcccgtacgacccacaccacaccacacaaccaattgcatctttccctttct 7977561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 342 - 418
Target Start/End: Original strand, 12190427 - 12190503
Alignment:
Q  342 tgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaattttatttt 418  Q
    |||||||||||||| |||||||| |||||| |||  |||||||||| ||||||||| || | |||||||||||||||    
T  12190427 tgcgtatcctgcactgatatctgtccgatacttcttgatacgtatcaggagagtattcagagattaaattttatttt 12190503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 307 - 398
Target Start/End: Complemental strand, 35746362 - 35746271
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatc 398  Q
    ||||||||||||||| |||||||||| ||||| | | |||||| |||| ||||| |||||  ||| || |||||||||||| ||||||||||    
T  35746362 ccgatacttcaaaatagatgacgtattgtatctcctacgtatcatgcatcgatacctgcctaatactttccgatacgtatcaggagagtatc 35746271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 631
Target Start/End: Original strand, 32625139 - 32625207
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttct 631  Q
    ||||||||| ||||||||||  ||||| |||||||| |||||||||||||||||||| ||| |||||||    
T  32625139 cctttatctttctttggtgctcgtacgacccacaccacaccacacaaccaattgcatctttccctttct 32625207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 357 - 443
Target Start/End: Complemental strand, 19102526 - 19102439
Alignment:
Q  357 gatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaattttatt-ttttaaaaaataattatccgatacttt 443  Q
    |||||||| ||||||| |||||||||||||| | ||||||| | |  ||||||||||||| |||||||||| |||| | |||||||||    
T  19102526 gatatctgtccgatatgtcccgatacgtatcagaagagtatacgacaattaaattttatttttttaaaaaaaaattgttcgatacttt 19102439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 344 - 443
Target Start/End: Original strand, 35618113 - 35618213
Alignment:
Q  344 cgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaattttatttttta-aaaaataattatccgatactt 442  Q
    ||||||||||||||||||||||  |||| ||  |||||| ||||   ||||||| |||| ||| ||||| |||||||| ||||| |||| ||||||||||    
T  35618113 cgtatcctgcaccgatatctgcttgatacttttcgatacatatcaaaagagtattcaaaaatttaatttaattttttataaaaacaattgtccgatactt 35618212  T
Q  443 t 443  Q
    |    
T  35618213 t 35618213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 564 - 629
Target Start/End: Complemental strand, 41392569 - 41392508
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacccaccacacaaccaattgcatgttttccttt 629  Q
    ||||||||| ||||||||||||||||| ||||    |||||||||||||||||||| ||| |||||    
T  41392569 cctttatctttctttggtgccagtacgaccca----caccacacaaccaattgcatatttcccttt 41392508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 375 - 434
Target Start/End: Original strand, 22737916 - 22737974
Alignment:
Q  375 cccgatacgtatctggagagtatccaaatattaaattttattttttaaaaaataattatc 434  Q
    ||||||||||||| |||||||||||||| ||| | | ||||||||| |||||||||||||    
T  22737916 cccgatacgtatcaggagagtatccaaagatt-attgttatttttttaaaaataattatc 22737974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 345 - 419
Target Start/End: Original strand, 27085409 - 27085483
Alignment:
Q  345 gtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaattttattttt 419  Q
    ||||| || ||||||||||||  |||| || ||||||||||||  ||||||||||  | ||||||||||||||||    
T  27085409 gtatcatgtaccgatatctgcatgatactttccgatacgtatcaagagagtatccggaaattaaattttattttt 27085483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 338
Target Start/End: Original strand, 22737857 - 22737894
Alignment:
Q  301 tgaagcccgatacttcaaaatggatgacgtatcgtatc 338  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  22737857 tgaagcccgatacttcaaaattgatgacgtattgtatc 22737894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 7 - 35
Target Start/End: Complemental strand, 14015889 - 14015861
Alignment:
Q  7 gtaacgtctttgtacataaatttaacata 35  Q
    |||||||||||||||||||||||||||||    
T  14015889 gtaacgtctttgtacataaatttaacata 14015861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 147; Significance: 4e-77; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 310 - 475
Target Start/End: Complemental strand, 31195977 - 31195811
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  31195977 atacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagtatccaaatattaaa 31195878  T
Q  410 ttttattttttaa-aaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31195877 ttttattttttaaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 31195811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 1036938 - 1036768
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| || |||||||||||| |||||||||| ||||||    
T  1036938 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatctaaatat 1036839  T
Q  406 taaattttatt-ttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1036838 taaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtg 1036768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 309 - 475
Target Start/End: Original strand, 8356967 - 8357134
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||| |||||| ||||||||||||||| | ||||||||||||||||||    
T  8356967 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgtccgatacttcccgatacgtatccgaagagtatccaaatattaa 8357066  T
Q  409 attttatttttt-aaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    |||||||||||| |||||||||||||||||||||||||||||| || ||||||||||  |||||||||    
T  8357067 attttattttttaaaaaaataattatccgatactttccgatacgtctcgatacgcacgaatacttgtg 8357134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 306 - 440
Target Start/End: Original strand, 3212483 - 3212618
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  3212483 cccgatacttcaaaatggatgacgtatcgtattccttgtgtatcctgcaccgatatctgcccgatacttcccgatacgtatccggagagtatccaaatat 3212582  T
Q  406 taaatttta-ttttttaaaaaataattatccgatac 440  Q
    ||||||||| ||||||| ||||||||||||||||||    
T  3212583 taaattttatttttttataaaataattatccgatac 3212618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 309 - 450
Target Start/End: Original strand, 32017986 - 32018127
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || || ||||||||| | |||||||   ||||||||    
T  32017986 gatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatatctgcccgatactttcctatacgtatccgtagagtatatgaatattaa 32018085  T
Q  409 attttattttttaaaaaataattatccgatactttccgatac 450  Q
    |||||||||||| |||||||| ||| ||||||||||| ||||    
T  32018086 attttatttttttaaaaataactattcgatactttccaatac 32018127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 306 - 450
Target Start/End: Complemental strand, 32130771 - 32130626
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||| |||||| |||||||| |||||||| |||||||||||||| |||| |||  ||||||||||||||||||||| |||||||||||||||||    
T  32130771 cccgatactttaaaatgaatgacgtaccgtatcccctgcgtatcctgcactgatacctgttcgatatttcccgatacgtatcaggagagtatccaaatat 32130672  T
Q  406 taaattttattttttaa-aaaataattatccgatactttccgatac 450  Q
    ||||||||||||||||| ||||||||| |||||||| | |||||||    
T  32130671 taaattttattttttaagaaaataattttccgatacgtcccgatac 32130626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 26327161 - 26327305
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||||||||| | || |||||||||||||||| |||||||||| ||||||||||||||   |||||||||| || ||    
T  26327161 cccgatacttcaaaatggatgacgtatcgtatctcctgtgtatcctgcaccgatacctgcccgatacttcccgatacgtat-aagagagtatccgaagat 26327259  T
Q  406 taaattttattttt-taaaaaataattatccgatactttccgatac 450  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||    
T  26327260 taaattttatttttaaaaaaaataattatccgatacttcccgatac 26327305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 306 - 437
Target Start/End: Complemental strand, 25834608 - 25834476
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||| ||||  |||| |||||||| ||||||||||| ||| |||||||||||||    
T  25834608 cccgatacttcaaattggatgacgtatcgtatcccgtgcgtatcctgcactgatacatgcctgatatttctcgatacgtatcaggacagtatccaaatat 25834509  T
Q  406 taaattttattttttaa-aaaataattatccga 437  Q
    ||||||||||||||||| ||||||||| |||||    
T  25834508 taaattttattttttaataaaataattttccga 25834476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 1036680 - 1036561
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||| ||    
T  1036680 cctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatctttccctttctaagaaattagggtttcaactttttcttccaa 1036581  T
Q  663 agtggtcgccgtccactttg 682  Q
    ||||||||||||||||||||    
T  1036580 agtggtcgccgtccactttg 1036561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 306 - 450
Target Start/End: Complemental strand, 7188888 - 7188746
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||   || |||||||| ||||||||||||||||||| ||||| |||| |||| |||||||||| |||||||||||||||||    
T  7188888 cccgatacttcaaaatggatg---taccgtatcccctgcgtatcctgcaccgatacctgcctgatacttcctgatacgtatccggagagtatccaaatat 7188792  T
Q  406 taaattttattttt-taaaaaataattatccgatactttccgatac 450  Q
    ||||||||||||||  |||||||||||||||||||| | |||||||    
T  7188791 taaattttatttttaaaaaaaataattatccgatacatcccgatac 7188746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 306 - 440
Target Start/End: Original strand, 27083991 - 27084125
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| | ||| ||||| ||||||||  |||||||||||||| ||    
T  27083991 cccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgctcaatacttcccaatacgtataaggagagtatccaaagat 27084090  T
Q  406 taaattttattttttaaaaaataattatccgatac 440  Q
    ||||||||||||   ||| |||||||| |||||||    
T  27084091 taaattttatttaaaaaataataattacccgatac 27084125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 310 - 450
Target Start/End: Original strand, 19128163 - 19128304
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    |||||| ||||||| |||||||||||||||| || |||||||||||| ||| | |||||||| || |||||||||||| | ||||||||| || ||||||    
T  19128163 atactttaaaatggttgacgtatcgtatcccctgtgtatcctgcaccaatacccgcccgatactttccgatacgtatcagaagagtatccgaagattaaa 19128262  T
Q  410 tttta-ttttttaaaaaataattatccgatactttccgatac 450  Q
    ||||| |||||| ||||||||||||||||||||| |||||||    
T  19128263 ttttattttttttaaaaataattatccgatacttcccgatac 19128304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 306 - 449
Target Start/End: Original strand, 234312 - 234459
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||| |||||||||||||| | ||||||||||||||||||| |||||||||| || |||||||||||| | ||||||||| || ||    
T  234312 cccgatacttcaaaatggttgacgtatcgtatctcctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatcagaagagtatccgaagat 234411  T
Q  406 taa----attttattttttaaaaaataattatccgatactttccgata 449  Q
    |||     |||| ||||||  |||||||||||||||||||| ||||||    
T  234412 taactttttttttttttttttaaaataattatccgatacttcccgata 234459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 565 - 682
Target Start/End: Complemental strand, 7188643 - 7188525
Alignment:
Q  565 ctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaa 663  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||| |||| |||| ||||||||||||||||||||| ||| |||    
T  7188643 ctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatctttcccttactaagaaattagggtttcaactttttcttccaaa 7188544  T
Q  664 gtggtcgccgtccactttg 682  Q
    |||||| ||  ||||||||    
T  7188543 gtggtcaccaaccactttg 7188525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 565 - 682
Target Start/End: Complemental strand, 31740677 - 31740559
Alignment:
Q  565 ctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaa 663  Q
    |||||||| ||||||||||||||||| |||||||| ||||||| || ||||| ||| ||  ||||||||||||||||||||||||||||||| ||| |||    
T  31740677 ctttatctttctttggtgccagtacgacccacaccacaccacataaacaatttcatcttcccctttctaaaaaattagggtttcaactttttcttccaaa 31740578  T
Q  664 gtggtcgccgtccactttg 682  Q
     |||||||| |||||||||    
T  31740577 atggtcgccttccactttg 31740559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 301 - 455
Target Start/End: Original strand, 3299141 - 3299298
Alignment:
Q  301 tgaagccc-gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcc 399  Q
    |||||||| ||||||||||||| ||||| ||| |||||||  ||| ||||||||||||||| ||||  ||||||| ||||||||||||||||||||||      
T  3299141 tgaagccctgatacttcaaaatagatgatgtaccgtatcctctgcatatcctgcaccgatacctgcatgatattttccgatacgtatctggagagtattt 3299240  T
Q  400 aaatattaaattttatttt-ttaaaaaataattatccgat-actttccgatacatccc 455  Q
    ||| ||||||||||||||| ||| ||| ||||||||| || | |||| ||||||||||    
T  3299241 aaagattaaattttattttattataaagtaattatccaataagtttctgatacatccc 3299298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 306 - 450
Target Start/End: Complemental strand, 6708153 - 6708008
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||| |||||||||||| ||| ||||||| || ||||| |||||||||| || || |||| || || ||| ||||| ||||||||||| || ||    
T  6708153 cccgatactttaaaatggatgacatattgtatcccctgtgtatcatgcaccgataccttcctgatactttccaatatgtatcaggagagtatccgaagat 6708054  T
Q  406 taaattttatttt-ttaaaaaataattatccgatactttccgatac 450  Q
    ||||| |||||||   |||||||||||||||||||||| |||||||    
T  6708053 taaatattattttaaaaaaaaataattatccgatacttcccgatac 6708008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 309 - 442
Target Start/End: Original strand, 11105295 - 11105429
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    ||||||| ||||||||||||||| ||||| | |||||||||||||| |||||  ||  ||||| || | |||||||||| | ||| ||| | || |||||    
T  11105295 gatactttaaaatggatgacgtaccgtattctttgcgtatcctgcatcgatacatgttcgatactttctgatacgtatcagaagaatattcgaagattaa 11105394  T
Q  409 atttta-ttttttaaaaaataattatccgatactt 442  Q
    |||||| ||||||||||||||||||| ||||||||    
T  11105395 attttatttttttaaaaaataattattcgatactt 11105429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 309 - 450
Target Start/End: Complemental strand, 13607894 - 13607752
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    |||||||||||||||||||||||||||||||  ||| |||||||||| |||| |||||  ||| || | |||||||||| ||||||||||| || |||||    
T  13607894 gatacttcaaaatggatgacgtatcgtatcctctgcatatcctgcactgatacctgcctaataatttctgatacgtatcaggagagtatccgaagattaa 13607795  T
Q  409 attt-tattttttaaaaaataattatccgatactttccgatac 450  Q
     ||| | || ||| | ||||||||||  ||||||| |||||||    
T  13607794 ctttattttattttataaataattatatgatacttcccgatac 13607752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 32130521 - 32130402
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||||| | ||||||  |||||| || ||||| ||| ||  ||||| ||||||||||||||||||||||||| ||| ||    
T  32130521 cctttatctttctttggtgccagtacgacacacaccataccacagaaacaatttcatcttcccctttttaaaaaattagggtttcaacttttttttccaa 32130422  T
Q  663 agtggtcgccgtccactttg 682  Q
    | | |||||| |||||||||    
T  32130421 aatagtcgccttccactttg 32130402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 307 - 450
Target Start/End: Complemental strand, 31741267 - 31741135
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    |||||||||||||||||||||||||||||||||| | || ||| |||| ||||| |||          ||||||||||||| ||||||  || ||||||     
T  31741267 ccgatacttcaaaatggatgacgtatcgtatcccctacgcatcatgcatcgatacctg----------cccgatacgtatcgggagag--tctaaatatc 31741180  T
Q  407 aaattttattttttaa-aaaataattatccgatactttccgatac 450  Q
    |||||||||||||||| || |||||| ||||||||||||||||||    
T  31741179 aaattttattttttaagaagataattttccgatactttccgatac 31741135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 301 - 381
Target Start/End: Original strand, 29892966 - 29893047
Alignment:
Q  301 tgaagccc-gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgata 381  Q
    |||||||| ||||||| ||||||||||| |||  ||||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  29892966 tgaagcccagatactttaaaatggatgatgtactgtatcccctgcgtatcctgcatcgatatctgtccgatatttcccgata 29893047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 315 - 433
Target Start/End: Complemental strand, 22989437 - 22989319
Alignment:
Q  315 tcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaatttta 414  Q
    |||||||||||||| ||| | ||| ||||||||| |||||| ||||||| || |||| || || ||||||||| ||| ||||||  |  |||||||||||    
T  22989437 tcaaaatggatgacatattgcatctcttgcgtattctgcacagatatctacctgatactttcctatacgtatcgggatagtatcagatgattaaatttta 22989338  T
Q  415 ttttttaaaaaataattat 433  Q
    ||||||  |||||||||||    
T  22989337 tttttttcaaaataattat 22989319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 315 - 433
Target Start/End: Original strand, 23798960 - 23799078
Alignment:
Q  315 tcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaatttta 414  Q
    |||||||||||||| ||| | ||| ||||||||| |||||| ||||||| || |||| || || ||||||||| ||| ||||||  |  |||||||||||    
T  23798960 tcaaaatggatgacatattgcatctcttgcgtattctgcacagatatctacctgatactttcctatacgtatcgggatagtatcagatgattaaatttta 23799059  T
Q  415 ttttttaaaaaataattat 433  Q
    ||||||  |||||||||||    
T  23799060 tttttttcaaaataattat 23799078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 307 - 360
Target Start/End: Original strand, 31079619 - 31079672
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgata 360  Q
    ||||||||| |||||||||||||||| ||||||| |||||||||||||||||||    
T  31079619 ccgatactttaaaatggatgacgtattgtatcccctgcgtatcctgcaccgata 31079672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 306 - 398
Target Start/End: Complemental strand, 13061417 - 13061325
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatc 398  Q
    ||||||||||||||||| |||||||| | ||| |  ||||||||||||| ||||||||||| |||| || | |||||||||  ||||||||||    
T  13061417 cccgatacttcaaaatgaatgacgtaccatattctctgcgtatcctgcatcgatatctgcctgatactttctgatacgtattaggagagtatc 13061325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 417
Target Start/End: Complemental strand, 10894690 - 10894584
Alignment:
Q  301 tgaagccc-gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcc 399  Q
    |||||||| ||||||||||||||||||||||| ||||||||  ||||||| |||||||||| |||          || |||||||||| |||||||||||    
T  10894690 tgaagccctgatacttcaaaatggatgacgtaccgtatccc-cgcgtatcatgcaccgatacctg----------cctgatacgtatcaggagagtatcc 10894602  T
Q  400 aaatattaaattttattt 417  Q
    ||| ||||||||||||||    
T  10894601 aaagattaaattttattt 10894584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 308 - 371
Target Start/End: Original strand, 7254938 - 7255001
Alignment:
Q  308 cgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgata 371  Q
    ||||||||||||||||| || |||||||||||| || ||||| ||||||||||  |||||||||    
T  7254938 cgatacttcaaaatggacgatgtatcgtatcccctgtgtatcatgcaccgatacatgcccgata 7255001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 443 - 475
Target Start/End: Complemental strand, 7188763 - 7188731
Alignment:
Q  443 tccgatacatcccgatacgcacagatacttgtg 475  Q
    |||||||||||||||||||||| ||||||||||    
T  7188763 tccgatacatcccgatacgcacggatacttgtg 7188731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 564 - 607
Target Start/End: Original strand, 8357213 - 8357257
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacac 607  Q
    ||||||||| ||||||||||||||||| |||||||| ||||||||    
T  8357213 cctttatctttctttggtgccagtacgacccacaccacaccacac 8357257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 376 - 420
Target Start/End: Complemental strand, 10894563 - 10894519
Alignment:
Q  376 ccgatacgtatctggagagtatccaaatattaaattttatttttt 420  Q
    |||||||||||| ||||||||||| || |||||||||| ||||||    
T  10894563 ccgatacgtatcaggagagtatccgaagattaaattttgtttttt 10894519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 373 - 450
Target Start/End: Original strand, 31079674 - 31079753
Alignment:
Q  373 ttcccgatacgtatctggagagtatccaaatattaaattttattt--tttaaaaaataattatccgatactttccgatac 450  Q
    ||| ||||| ||||| ||| ||||||  || ||||||||||||||  ||| ||||||||||||| ||||||| |||||||    
T  31079674 ttctcgataagtatcaggatagtatcttaagattaaattttattttattttaaaaataattatctgatacttcccgatac 31079753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 139; Significance: 2e-72; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 22201449 - 22201279
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| || |||||||||||| |||||||||||||||||    
T  22201449 cccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatccaaatat 22201350  T
Q  406 taaattttatt-ttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22201349 taaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtg 22201279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 308 - 474
Target Start/End: Original strand, 32759381 - 32759548
Alignment:
Q  308 cgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatta 407  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  32759381 cgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagtatccaaatatta 32759480  T
Q  408 aatttta-ttttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgt 474  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  32759481 aattttatttttttaaaaaataattatccgatactttccgatacgtcccgatacgcacggatacttgt 32759548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 16384623 - 16384793
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| || |||||||||||||||| |||||||||| ||||||||||||||| | |||||||||||||||    
T  16384623 cccgatacttcaaaatggatgacgtaccgtatcccctgagtatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagtatccaaatat 16384722  T
Q  406 taaattttatttttt-aaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16384723 taaattttattttttaaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtg 16384793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 34901494 - 34901324
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| || |||||||||||| |||||||||| ||||||    
T  34901494 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatctaaatat 34901395  T
Q  406 taaattttatt-ttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34901394 taaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtg 34901324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 28876678 - 28876507
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||| |||||||||| ||| |||||||||||  ||||||||||||||||    
T  28876678 cccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacttctcgatacgtatccagagagtatccaaatat 28876579  T
Q  406 taaattttattttttaa--aaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28876578 taaattttattttttaaaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtg 28876507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 13422214 - 13422384
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||| ||||||||||||||| ||||| |||| ||||||||||||||  |||||||||||||||||    
T  13422214 cccgatacttcaaaatggatgacgtaccgtatcccctgcatatcctgcaccgatacctgcctgatacttcccgatacgtatacggagagtatccaaatat 13422313  T
Q  406 taaattttatttt-ttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  13422314 taaattttattttgttaaaaaataattatccaatactttccgatacatcccgatacgcacggatacttgtg 13422384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 43771816 - 43771646
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||  || |||||| |||| |||||||||| |||||||||||||||||    
T  43771816 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacatgtccgatacttcctgatacgtatccggagagtatccaaatat 43771717  T
Q  406 taaattttattttt-taaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  43771716 taaattttatttttaaaaaaaataattatccgatactttgcgatacatcccgatacgcacggatacttgtg 43771646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 12580665 - 12580495
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||| ||||| ||| |||||| | ||||||||||||||||||| ||| | |||| ||||||||||||||| |||||||||||||||||    
T  12580665 cccgatacttcaaaatagatgatgtaccgtatctcctgcgtatcctgcaccgataactgtctgatacttcccgatacgtatccggagagtatccaaatat 12580566  T
Q  406 taaattttatt-ttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  12580565 taaattttatttttttaaaatataattatctgatactttccgatacatcccgatacgcacggatacttgtg 12580495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 306 - 440
Target Start/End: Original strand, 32877443 - 32877578
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  32877443 cccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggagagtatccaaatat 32877542  T
Q  406 taaattttatttttt-aaaaaataattatccgatac 440  Q
    ||||||||||||||| ||||||||||| ||||||||    
T  32877543 taaattttattttttaaaaaaataattttccgatac 32877578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 306 - 440
Target Start/End: Complemental strand, 2873022 - 2872888
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  2873022 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatat 2872923  T
Q  406 taaattttattttttaaaaaataattatccgatac 440  Q
     ||||||||||||||||||||| ||||||||||||    
T  2872922 gaaattttattttttaaaaaatgattatccgatac 2872888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 36483441 - 36483586
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| || |||||||||||| | |||||||||||||||    
T  36483441 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccgaagagtatccaaatat 36483540  T
Q  406 taaattttatttttt-aaaaaataattatccgatactttccgatac 450  Q
    ||||||||||||||| |||||||||||||||||||| | |||||||    
T  36483541 taaattttattttttaaaaaaataattatccgatacgtcccgatac 36483586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 306 - 440
Target Start/End: Original strand, 6028493 - 6028628
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| || ||||||| |||| |||||||||||||||||    
T  6028493 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatatctgcccgatactttccgatacatatcgggagagtatccaaatat 6028592  T
Q  406 taaattttattttttaa-aaaataattatccgatac 440  Q
    ||||||||||||||||| ||||||||| ||||||||    
T  6028593 taaattttattttttaagaaaataattttccgatac 6028628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 309 - 475
Target Start/End: Complemental strand, 19948105 - 19947939
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||| ||||| ||||||||||||| | ||||||||||||||||||||    
T  19948105 gatacttcaaaatggatgacgtatcatatcccctgcgtatcctgcaccgatacctgctcgatacttcccgatacgtaccgggagagtatccaaatattaa 19948006  T
Q  409 attttattttttaa-aaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
     ||| ||||||||| ||||||||| ||||||  |||||||||| | ||||||||||||||||||||||    
T  19948005 cttt-attttttaagaaaataattttccgattatttccgatacgttccgatacgcacagatacttgtg 19947939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 4245946 - 4246091
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||| ||||||||| ||||||||| |||||||| ||| ||||||||||||||| |||||||||| ||||||||||||||| | |||||||||||||||    
T  4245946 cccgatgcttcaaaatagatgacgtaccgtatcccctgcatatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagtatccaaatat 4246045  T
Q  406 taaattttatttttt-aaaaaataattatccgatactttccgatac 450  Q
    ||||||||||||||| |||||||||||||||||||| | |||||||    
T  4246046 taaattttattttttaaaaaaataattatccgatacatcccgatac 4246091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 306 - 450
Target Start/End: Complemental strand, 45217332 - 45217187
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||| |||||||||||  ||| ||||||| ||||||||||||||||||| ||| ||||||||| |||||||||||| |||||||||||||||||    
T  45217332 cccgatactttaaaatggatgatatattgtatcccctgcgtatcctgcaccgatacctgtccgatattttccgatacgtatccggagagtatccaaatat 45217233  T
Q  406 taaattttattttttaa-aaaataattatccgatactttccgatac 450  Q
    ||||||||||||||||| |||||||||||||||||| | |||||||    
T  45217232 taaattttattttttaaaaaaataattatccgatacatcccgatac 45217187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 310 - 440
Target Start/End: Original strand, 25022135 - 25022266
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    ||||||||||||||||||| || |||||| | ||||||||||||||||||| |||||||||| |||| |||||||||| |||||||||||||||||||||    
T  25022135 atacttcaaaatggatgacataccgtatctcctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatcgggagagtatccaaatattaaa 25022234  T
Q  410 ttttattttttaa-aaaataattatccgatac 440  Q
    ||||||||||||| ||||||||| ||||||||    
T  25022235 ttttattttttaagaaaataattttccgatac 25022266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 307 - 449
Target Start/End: Original strand, 32424928 - 32425071
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | |||| ||| ||||||||||| | ||||||||| || |||    
T  32424928 ccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatacctgtctgatacttcacgatacgtatcagaagagtatccgaagatt 32425027  T
Q  407 aaattttattttt-taaaaaataattatccgatactttccgata 449  Q
    |||||||||||||  |||||||||||||||||||||| ||||||    
T  32425028 aaattttatttttaaaaaaaataattatccgatacttcccgata 32425071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 306 - 440
Target Start/End: Complemental strand, 5818423 - 5818288
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||  |||||||||||||| ||||| ||||||||||  || ||    
T  5818423 cccgatacttcaaaatggatgacgtatcgtatcacttgcgtatcctgcaccgatacctgcatgatatttcccgatatgtatcaggagagtatctgaagat 5818324  T
Q  406 taaattttattttt-taaaaaataattatccgatac 440  Q
    ||||||||||||||  |||||||||||||| |||||    
T  5818323 taaattttatttttaaaaaaaataattatctgatac 5818288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 34901235 - 34901116
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||| ||    
T  34901235 cctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatctttccctttctaagaaattagggtttcaactttttcttccaa 34901136  T
Q  663 agtggtcgccgtccactttg 682  Q
    ||||||||||||||||||||    
T  34901135 agtggtcgccgtccactttg 34901116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 4246181 - 4246300
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||| ||||||||| ||||||||||| ||||||||| ||| ||    
T  4246181 cctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatctttccctttctaagaaattagggttccaactttttcttccaa 4246280  T
Q  663 agtggtcgccgtccactttg 682  Q
    ||||||||||||||||||||    
T  4246281 agtggtcgccgtccactttg 4246300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 309 - 450
Target Start/End: Complemental strand, 32638965 - 32638833
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||          |||||| ||||||||||||||||||||    
T  32638965 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgata----------cgtatccggagagtatccaaatattaa 32638876  T
Q  409 attttattttttaa-aaaataattatccgatactttccgatac 450  Q
    |||||||||||||| |||||||||||| |||||||||||||||    
T  32638875 attttattttttaaaaaaataattatctgatactttccgatac 32638833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 43771558 - 43771439
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||| ||    
T  43771558 cctttatctatctttggtgtcagtacgacccacaccacaccacacaaccaattgcatctttccctttctaagaaattagggtttcaactttttcttccaa 43771459  T
Q  663 agtggtcgccgtccactttg 682  Q
    ||||||||| ||||||||||    
T  43771458 agtggtcgctgtccactttg 43771439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 37668588 - 37668733
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| ||||| || |||||||| |||||| ||||||| | |||| |||||||||| |||  ||| | |||||||||||    
T  37668588 cccgatacttcaaaatggatgacgtaccgtattccctgcgtatcttgcaccaatatctgtctgatacttcccgatacatatacggataatatccaaatat 37668687  T
Q  406 taaatttta-ttttttaaaaaataattatccgatactttccgatac 450  Q
    ||||||||| |||||||||||||||||||||||||| | |||||||    
T  37668688 taaattttatttttttaaaaaataattatccgatacgtcccgatac 37668733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 45217086 - 45216967
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||| |||| |||| ||||||||||||||||||||| ||| ||    
T  45217086 cctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatctttcccttactaagaaattagggtttcaactttttcttccaa 45216987  T
Q  663 agtggtcgccgtccactttg 682  Q
    ||||||| ||||||||||||    
T  45216986 agtggtcaccgtccactttg 45216967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 307 - 417
Target Start/End: Original strand, 37372266 - 37372376
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||| |||| ||| | |||| ||||||||||||||| ||||||||||| || |||    
T  37372266 ccgatacttcaaaatggatgacgtatcgtatctcctgcgtatcctgcactgatacctgtctgatacttcccgatacgtatcaggagagtatccgaagatt 37372365  T
Q  407 aaattttattt 417  Q
    |||||||||||    
T  37372366 aaattttattt 37372376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 566 - 682
Target Start/End: Complemental strand, 28876429 - 28876312
Alignment:
Q  566 tttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaag 664  Q
    ||||||| |||||||||||| |||| |||||||| |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||  ||||    
T  28876429 tttatctttctttggtgccaatacgacccacaccacaccacacaaccaattgcatctttccctttctaagaaattagggtttcaactttttctttcaaag 28876330  T
Q  665 tggtcgccgtccactttg 682  Q
    |||| |||||||||||||    
T  28876329 tggtggccgtccactttg 28876312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 574 - 682
Target Start/End: Complemental strand, 32638791 - 32638682
Alignment:
Q  574 tctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaagtggtcgcc 672  Q
    ||||||||||||||||| |||||||| |||||||||| ||||||||| ||| ||||||||| |||||||||||||||| |||| ||| ||||||||||||    
T  32638791 tctttggtgccagtacgacccacaccacaccacacaaacaattgcatctttccctttctaagaaattagggtttcaacattttcttccaaagtggtcgcc 32638692  T
Q  673 gtccactttg 682  Q
    ||||||||||    
T  32638691 gtccactttg 32638682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 36483689 - 36483803
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacccaccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaa 663  Q
    ||||||||| ||||||||||||||||| ||||||||    |||||| ||||||||| ||| ||||||||| ||||||||||||||||||||| ||| |||    
T  36483689 cctttatctttctttggtgccagtacgacccacacc----acacaaacaattgcatctttccctttctaagaaattagggtttcaactttttcttccaaa 36483784  T
Q  664 gtggtcgccgtccactttg 682  Q
    |||||||||||||||||||    
T  36483785 gtggtcgccgtccactttg 36483803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 5539674 - 5539793
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||| |||||| || ||||||  ||||||||||||| ||| ||    
T  5539674 cctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatctttccctttccaagaaattaaagtttcaactttttcttccaa 5539773  T
Q  663 agtggtcgccgtccactttg 682  Q
    ||||||| ||||||||||||    
T  5539774 agtggtcaccgtccactttg 5539793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 306 - 442
Target Start/End: Original strand, 27886196 - 27886333
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||| |||| || ||| ||||||||||||||| |||   |||| ||||||||||||||| ||||||||||| || ||    
T  27886196 cccgatacttcaaaatggatgacgtattgtattccctgcatatcctgcaccgatacctggttgatacttcccgatacgtatcaggagagtatccgaagat 27886295  T
Q  406 taaattttattttt-taaaaaataattatccgatactt 442  Q
    |||| |||||||||  |||||||| ||||| |||||||    
T  27886296 taaagtttatttttaaaaaaaatagttatctgatactt 27886333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 306 - 442
Target Start/End: Original strand, 27944854 - 27944991
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||| |||| || ||| ||||||||||||||| |||   |||| ||||||||||||||| ||||||||||| || ||    
T  27944854 cccgatacttcaaaatggatgacgtattgtattccctgcatatcctgcaccgatacctggttgatacttcccgatacgtatcaggagagtatccgaagat 27944953  T
Q  406 taaattttattttt-taaaaaataattatccgatactt 442  Q
    |||| |||||||||  |||||||| ||||| |||||||    
T  27944954 taaagtttatttttaaaaaaaatagttatctgatactt 27944991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 301 - 450
Target Start/End: Original strand, 29355623 - 29355775
Alignment:
Q  301 tgaagccc-gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcc 399  Q
    |||||||| |||||||||||||||||||| |||| |||||| || |||||||||| ||||| ||||  |||| ||||||||||||| | |||||||||||    
T  29355623 tgaagccctgatacttcaaaatggatgacatatcatatcccctgggtatcctgcatcgatagctgcttgatacttcccgatacgtagcaggagagtatcc 29355722  T
Q  400 aaatattaaattttattttttaaaaaa--taattatccgatactttccgatac 450  Q
     || ||||||||||| |||||||||||  ||||||  |||||||| |||||||    
T  29355723 gaagattaaattttaatttttaaaaaaagtaattagtcgatacttcccgatac 29355775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 306 - 442
Target Start/End: Original strand, 38388673 - 38388810
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||  |||| ||||||  ||||||||||||||||||| ||| |||||| ||| |||||||| || ||| ||||||| || ||    
T  38388673 cccgatacttcaaaatggatgctgtattgtatcctctgcgtatcctgcaccgatacctgtccgatacttctcgatacgtgtcaggaaagtatccgaagat 38388772  T
Q  406 taaatttta-ttttttaaaaaataattatccgatactt 442  Q
    ||||||||| |||||||||||| |||||||| ||||||    
T  38388773 taaattttatttttttaaaaaacaattatccaatactt 38388810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 306 - 452
Target Start/End: Original strand, 27968109 - 27968258
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggaga--gtatccaaat 403  Q
    |||||||||| ||||| |||||||||| |||| || ||| ||||||||||||||| ||| | |||| ||||||||||||||| |||||  |||||| ||     
T  27968109 cccgatacttaaaaatagatgacgtattgtattccctgcatatcctgcaccgatacctggctgatacttcccgatacgtatcaggagatcgtatccgaag 27968208  T
Q  404 attaaattttatttttt-aaaaaataattatccgatactttccgatacat 452  Q
    |||||| |||||||||| |||||||||||||| |||||||  ||||||||    
T  27968209 attaaagtttattttttaaaaaaataattatctgatacttctcgatacat 27968258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 306 - 452
Target Start/End: Original strand, 28025095 - 28025244
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggaga--gtatccaaat 403  Q
    |||||||||| ||||| |||||||||| |||| || ||| ||||||||||||||| ||| | |||| ||||||||||||||| |||||  |||||| ||     
T  28025095 cccgatacttaaaaatagatgacgtattgtattccctgcatatcctgcaccgatacctggctgatacttcccgatacgtatcaggagatcgtatccgaag 28025194  T
Q  404 attaaattttatttttt-aaaaaataattatccgatactttccgatacat 452  Q
    |||||| |||||||||| |||||||||||||| |||||||  ||||||||    
T  28025195 attaaagtttattttttaaaaaaataattatctgatacttctcgatacat 28025244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 12580387 - 12580273
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacccaccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaa 663  Q
    ||||||||| ||||||| |||||||||  |||||||    |||||| ||||||||| ||||||||||||| ||||||||||||||||||||| ||| |||    
T  12580387 cctttatctctctttggagccagtacgatccacacc----acacaaacaattgcatcttttcctttctaagaaattagggtttcaactttttcttccaaa 12580292  T
Q  664 gtggtcgccgtccactttg 682  Q
    |||||||| ||||||||||    
T  12580291 gtggtcgctgtccactttg 12580273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 307 - 382
Target Start/End: Original strand, 19436281 - 19436356
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatac 382  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||| ||||||||||    
T  19436281 ccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatacctgaccgatacttcccgatac 19436356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 307 - 382
Target Start/End: Original strand, 19572430 - 19572505
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatac 382  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||| ||||||||||    
T  19572430 ccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatacctgaccgatacttcccgatac 19572505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 301 - 443
Target Start/End: Original strand, 12357889 - 12358023
Alignment:
Q  301 tgaagcccg-atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcc 399  Q
    ||||||||| |||||||||||||||||||||| |||||||  || |||||||||||||||||||          |||||||||||||| | | |||||||    
T  12357889 tgaagcccggatacttcaaaatggatgacgta-cgtatcctctgtgtatcctgcaccgatatct----------tcccgatacgtatcagcatagtatcc 12357977  T
Q  400 aaatattaaattttatttttt--aaaaaataattatccgatacttt 443  Q
    |||||||||||||||||||||  |||||| ||||||||||||||||    
T  12357978 aaatattaaattttatttttttaaaaaaacaattatccgatacttt 12358023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 301 - 443
Target Start/End: Original strand, 12359017 - 12359151
Alignment:
Q  301 tgaagcccg-atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcc 399  Q
    ||||||||| |||||||||||||||||||||| |||||||  || |||||||||||||||||||          |||||||||||||| | | |||||||    
T  12359017 tgaagcccggatacttcaaaatggatgacgta-cgtatcctctgtgtatcctgcaccgatatct----------tcccgatacgtatcagcatagtatcc 12359105  T
Q  400 aaatattaaattttatttttt--aaaaaataattatccgatacttt 443  Q
    |||||||||||||||||||||  |||||| ||||||||||||||||    
T  12359106 aaatattaaattttatttttttaaaaaaacaattatccgatacttt 12359151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 299 - 431
Target Start/End: Original strand, 42949136 - 42949262
Alignment:
Q  299 attgaagcccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatc 398  Q
    |||||||||||||||||||||||||||||  ||| ||||||         |||||||||||||||| | |||| ||  ||||||||||| ||||||||||    
T  42949136 attgaagcccgatacttcaaaatggatgatatattgtatcctc-------cctgcaccgatatctgtctgatacttttcgatacgtatcgggagagtatc 42949228  T
Q  399 caaatattaaattttattttttaa-aaaataatt 431  Q
    |||||||||||||||||||||||| |||||||||    
T  42949229 caaatattaaattttattttttaagaaaataatt 42949262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 417
Target Start/End: Original strand, 5539436 - 5539541
Alignment:
Q  301 tgaagcccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcca 400  Q
    ||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||||| |||||||||||          ||||| ||||||||||||    
T  5539436 tgaagcccgatacttcaaaatggatgatgtactgtatccc-tgcgtatcctgcaccgatacctgcccgatat----------gtatccggagagtatcca 5539524  T
Q  401 aatattaaattttattt 417  Q
    |||||||||||||||||    
T  5539525 aatattaaattttattt 5539541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 20182380 - 20182524
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||| ||||||||||||  ||||||| ||| ||||||||| | ||||||| | |||| ||  ||||||||||| | ||||||||  || ||    
T  20182380 cccgatacttcaagatggatgacgtacggtatcccgtgcatatcctgca-ctatatctgtctgatacttttcgatacgtatcagtagagtatctgaagat 20182478  T
Q  406 taaatttt-attttttaaaaaataattatccgatactttccgatac 450  Q
    |||||||| |||||| |||||||||||| ||||||||| |||||||    
T  20182479 taaattttaatttttaaaaaaataattaaccgatacttcccgatac 20182524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 37668835 - 37668948
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacccaccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaa 663  Q
    ||||||||| ||||||||||||||||| ||||||||    |||||| ||||||||| |||  |||| ||| || |||||||||||||||||| ||| |||    
T  37668835 cctttatct-tctttggtgccagtacgacccacacc----acacaaacaattgcatctttctctttataagaatttagggtttcaactttttcttccaaa 37668929  T
Q  664 gtggtcgccgtccactttg 682  Q
    |||||||||||||||||||    
T  37668930 gtggtcgccgtccactttg 37668948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 310 - 443
Target Start/End: Original strand, 23265659 - 23265788
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    |||||| ||||| || ||| || |||||| | ||||||| |||||| |||||||| || ||||||||||||||||||| ||||||||||| || |||||     
T  23265659 atactttaaaatagacgacataccgtatctcctgcgtattctgcactgatatctgtccaatatttcccgatacgtatcaggagagtatccgaagattaat 23265758  T
Q  410 ttttattttttaaaaaataattatccgatacttt 443  Q
    |||| |||||    ||| ||||||||||||||||    
T  23265759 tttttttttt----aaacaattatccgatacttt 23265788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 310 - 371
Target Start/End: Original strand, 40412445 - 40412506
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgata 371  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||| || ||||||||||    
T  40412445 atacttcaaaatggatgatgtatcgtatcccctgcgtatcctgcaccgttacctgcccgata 40412506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 309 - 443
Target Start/End: Original strand, 17702504 - 17702639
Alignment:
Q  309 gatacttcaaaatggatgacgtatcg-tatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatta 407  Q
    ||||||||||||||||||| |||||| ||||   | |||||| || ||||||| || ||||||| | | ||||||||||| ||||||||||  || ||||    
T  17702504 gatacttcaaaatggatgaagtatcggtatcatat-cgtatcgtgtaccgataccttcccgatactcctcgatacgtatcgggagagtatctgaaaatta 17702602  T
Q  408 aattttatttttta-aaaaataattatccgatacttt 443  Q
    |||||||||||||| |||||||||| | |||||||||    
T  17702603 aattttattttttataaaaataattgttcgatacttt 17702639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 19947838 - 19947719
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||  ||||||||| || |||| ||||||||  |||||| || ||||| ||| ||  ||||| ||||||||||||||||||||||||| ||| ||    
T  19947838 cctttatcattctttggtgtcaatacgacccacaccataccacagaaacaatttcatattcccctttttaaaaaattagggtttcaactttttcttccaa 19947739  T
Q  663 agtggtcgccgtccactttg 682  Q
    | |||||||| |||||||||    
T  19947738 aatggtcgccttccactttg 19947719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 565 - 669
Target Start/End: Original strand, 32877712 - 32877812
Alignment:
Q  565 ctttatctatctttggtgccagtacggcccacacccaccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaag 664  Q
    |||||||| ||||||||||||||||| ||||||||    ||| || ||||| ||| ||  ||||||||||||||||||||||||||||||| ||| |||     
T  32877712 ctttatctttctttggtgccagtacgacccacacc----acagaaacaatttcatcttcccctttctaaaaaattagggtttcaactttttcttccaaaa 32877807  T
Q  665 tggtc 669  Q
    |||||    
T  32877808 tggtc 32877812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 394 - 456
Target Start/End: Original strand, 40412508 - 40412571
Alignment:
Q  394 gtatccaaatattaaattttattttttaaaa-aataattatccgatactttccgatacatcccg 456  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  40412508 gtatccgaatattaaattttattttttaaaaaaataattatccgatacttttcgatacgtcccg 40412571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 306 - 442
Target Start/End: Original strand, 32687 - 32812
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||| ||||||| ||||||||| |||||  || |||||||||| |||||||||||||||| || | |||||           |||||| || ||    
T  32687 cccgatactttaaaatggttgacgtatcatatcctctgtgtatcctgcatcgatatctgcccgatactttctgatac-----------gtatccgaagat 32775  T
Q  406 taaattttattttttaaaaaataattatccgatactt 442  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  32776 taaattttatttttttaaaaataattatctgatactt 32812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 317 - 443
Target Start/End: Complemental strand, 30804846 - 30804724
Alignment:
Q  317 aaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaattttatt 416  Q
    ||||| |||||||||| ||||  | |||||||| |||| | |||| ||| ||||| || |||||||||||| ||||||||||| ||||||||    | ||    
T  30804846 aaaatagatgacgtattgtatatcctgcgtatcttgcatcaatatttgctcgatactttccgatacgtatcaggagagtatccgaatattaa----tttt 30804751  T
Q  417 ttttaaaaaataattatccgatacttt 443  Q
    ||| |||||||||||||| ||||||||    
T  30804750 tttaaaaaaataattatctgatacttt 30804724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 7411643 - 7411707
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgata 371  Q
    |||||||||||||||||||| ||||||||||||  || |||||||||| ||||| ||||||||||    
T  7411643 ccgatacttcaaaatggatggcgtatcgtatccactgtgtatcctgcatcgatacctgcccgata 7411707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 6028745 - 6028864
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| | ||||||| ||||||| ||||||||  |||| | || ||||| ||| ||  ||||| ||||||||||||||||||||||||| ||| ||    
T  6028745 cctttatctttatttggtgtcagtacgacccacaccataccatagaaacaatttcatcttcccctttttaaaaaattagggtttcaactttttcttccaa 6028844  T
Q  663 agtggtcgccgtccactttg 682  Q
      |||||||| |||||||||    
T  6028845 gatggtcgccttccactttg 6028864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 378 - 456
Target Start/End: Complemental strand, 8171278 - 8171200
Alignment:
Q  378 gatacgtatctggagagtatccaaatattaaattttattttttaaaaaa-taattatccgatactttccgatacatcccg 456  Q
    |||||||||| | ||||||||| ||||||||||||||||||  |||||| ||||||| ||||| ||||||||||||||||    
T  8171278 gatacgtatc-gtagagtatccgaatattaaattttattttaaaaaaaaataattattcgataatttccgatacatcccg 8171200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 368 - 450
Target Start/End: Complemental strand, 24100243 - 24100160
Alignment:
Q  368 gatatttcccgatacgtatctggagagtatccaaatattaaatttt-attttttaaaaaataattatccgatactttccgatac 450  Q
    ||||||| |||||| ||||| ||||||||||| || |||||||||| |||||||||||||||||||  | |||||| |||||||    
T  24100243 gatattttccgatatgtatcaggagagtatccgaagattaaattttaattttttaaaaaataattagtcaatacttcccgatac 24100160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 310 - 443
Target Start/End: Original strand, 10349254 - 10349388
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    |||||| ||||||||||| |||| |||||   || |||| ||| || ||||| || | |||| ||| ||||||||||| ||| ||||||  || ||||||    
T  10349254 atactttaaaatggatgatgtattgtatcatctgtgtattctgtactgatatatgtctgatacttctcgatacgtatcaggaaagtatctgaagattaaa 10349353  T
Q  410 tttta-ttttttaaaaaataattatccgatacttt 443  Q
    ||||| |||||||||||| |||||||| |||||||    
T  10349354 ttttatttttttaaaaaacaattatccaatacttt 10349388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 576 - 682
Target Start/End: Original strand, 25022417 - 25022528
Alignment:
Q  576 tttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattct----aaagtggtcg 670  Q
    ||||||||||||||| ||||||||  |||||| || ||||| ||| ||  ||||| ||||||||||||||||||||||||| ||||    ||| ||||||    
T  25022417 tttggtgccagtacgacccacaccataccacataaacaatttcatcttcccctttttaaaaaattagggtttcaacttttttttctttccaaaatggtcg 25022516  T
Q  671 ccgtccactttg 682  Q
    || |||||||||    
T  25022517 ccttccactttg 25022528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 564 - 681
Target Start/End: Original strand, 19436507 - 19436625
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||  ||| | ||||||||  |||| | || ||||| ||| ||  ||||| ||||||||||||||||||||||||| ||  ||    
T  19436507 cctttatctttctttggtgcaggtatgacccacaccataccatagaaacaatttcatcttcccctttttaaaaaattagggtttcaactttttctttcaa 19436606  T
Q  663 agtggtcgccgtccacttt 681  Q
    | |||||||| ||||||||    
T  19436607 aatggtcgccttccacttt 19436625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 564 - 681
Target Start/End: Original strand, 19572656 - 19572774
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||  ||| | ||||||||  |||| | || ||||| ||| ||  ||||| ||||||||||||||||||||||||| ||  ||    
T  19572656 cctttatctttctttggtgcaggtatgacccacaccataccatagaaacaatttcatcttcccctttttaaaaaattagggtttcaactttttctttcaa 19572755  T
Q  663 agtggtcgccgtccacttt 681  Q
    | |||||||| ||||||||    
T  19572756 aatggtcgccttccacttt 19572774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 306 - 413
Target Start/End: Original strand, 3891968 - 3892075
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||| ||||||||||||||||||||  |||| | | |||||| ||||||||||  || | |||| || || |||||||||  |||||||| | || ||    
T  3891968 cccgattcttcaaaatggatgacgtattatatctcctacgtatcatgcaccgatacttgtctgatactttccaatacgtatcgagagagtattcgaagat 3892067  T
Q  406 taaatttt 413  Q
    ||||||||    
T  3892068 taaatttt 3892075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 443 - 475
Target Start/End: Original strand, 4246074 - 4246106
Alignment:
Q  443 tccgatacatcccgatacgcacagatacttgtg 475  Q
    |||||||||||||||||||||| ||||||||||    
T  4246074 tccgatacatcccgatacgcacggatacttgtg 4246106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 139; Significance: 2e-72; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 19738703 - 19738873
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  19738703 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatat 19738802  T
Q  406 taaatttta-ttttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  19738803 taaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtg 19738873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 8064221 - 8064051
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| || |||||||||||| |||||||||| ||||||    
T  8064221 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatctaaatat 8064122  T
Q  406 taaattttatt-ttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8064121 taaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtg 8064051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 5325833 - 5325663
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||| |||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  5325833 cccgatactttaaaatggatgacgtattgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagtatccaaatat 5325734  T
Q  406 taaattttattttt-taaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||  ||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||    
T  5325733 taaattttatttttaaaaaaaataattatccgatatttttcgatacatcccgatacgcacggatacttgtg 5325663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 52122981 - 52122811
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  52122981 cccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatat 52122882  T
Q  406 taaattttatt-ttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||| || |||||||||| ||||||||||    
T  52122881 taaattttatttttttaaaaaataattatctgatactttccgatacgtctcgatacgcacggatacttgtg 52122811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 53322343 - 53322513
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | || ||||| ||||||||||||||| |||||||||||||||||    
T  53322343 cccgatacttcaaaatggatgacgtatcgtatcctttgcgtatcctgcactgataccggctcgatacttcccgatacgtatccggagagtatccaaatat 53322442  T
Q  406 taaatttta-ttttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  53322443 taaattttatttttttaaaaaataattatccgatactttccgatatgtcccgatacgcacggatacttgtg 53322513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 301 - 450
Target Start/End: Original strand, 52721265 - 52721415
Alignment:
Q  301 tgaagcccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcca 400  Q
    |||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||  ||||||||||||    
T  52721265 tgaagcccaatacttcaaaatagatgacgtatcgtatcccctgcgtatcctgcaccgatatctgcctgatacttcccgatacgtattcggagagtatcca 52721364  T
Q  401 aatattaaatttta-ttttttaaaaaataattatccgatactttccgatac 450  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  52721365 aatattaaattttatttttttataaaataattatccgatactttccgatac 52721415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 307 - 450
Target Start/End: Original strand, 5834837 - 5834981
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||  ||||||||||||||| ||||||||||||||||||    
T  5834837 ccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatgcttcccgatacgtatcgggagagtatccaaatatt 5834936  T
Q  407 aaattttattttttaa-aaaataattatccgatactttccgatac 450  Q
    |||||||||||||||| ||||||||| |||||||| | |||||||    
T  5834937 aaattttattttttaagaaaataattttccgatacgtcccgatac 5834981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 28377002 - 28377172
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||||||||| | || |||||||||||||||| || ||||||| ||  ||||||||| | |||||||||||||||||    
T  28377002 cccgatacttcaaaatggatgacgtatcgtatctcctgtgtatcctgcaccgatacctacccgatacttttcgatacgtaccgggagagtatccaaatat 28377101  T
Q  406 taaattttattttttaa-aaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||||| ||||||||| ||| ||||||| |||||| ||  ||||||||| ||||||||||    
T  28377102 taaattttattttttaagaaaataattttccaatacttttcgatacttcttgatacgcacggatacttgtg 28377172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 306 - 450
Target Start/End: Complemental strand, 42472681 - 42472536
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||  |||| || |||||||||||||||||||  ||||||||| ||||| ||||||||| |||||||||||||||||    
T  42472681 cccgatacttcaaaatggatgacgtactgtattccctgcgtatcctgcaccgatacttgcccgatacttcccaatacgtatccggagagtatccaaatat 42472582  T
Q  406 taaattttattttt-taaaaaataattatccgatactttccgatac 450  Q
    ||||||||||||||  |||||||||||||||||||| | |||||||    
T  42472581 taaattttatttttaaaaaaaataattatccgatacatcccgatac 42472536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 41145618 - 41145764
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||| ||| |||||| || |||||||||||  |||||||||||||||||    
T  41145618 cccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcatcgatacctgtccgatactttccgatacgtattcggagagtatccaaatat 41145717  T
Q  406 taaattttattttt--taaaaaataattatccgatactttccgatac 450  Q
    ||||||||||||||   ||||||| ||||||||||||||||||||||    
T  41145718 taaattttatttttaaaaaaaaattattatccgatactttccgatac 41145764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 8063961 - 8063842
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||| ||    
T  8063961 cctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatctttccctttctaagaaattagggtttcaactttttcttccaa 8063862  T
Q  663 agtggtcgccgtccactttg 682  Q
    ||||||||||||||||||||    
T  8063861 agtggtcgccgtccactttg 8063842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 301 - 449
Target Start/End: Complemental strand, 46432050 - 46431901
Alignment:
Q  301 tgaagcccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcca 400  Q
    |||||||||||||||||||| ||||||||||||||||||  ||| ||||||||| ||||| ||| | |||| |||||||||||||||  |||||||||||    
T  46432050 tgaagcccgatacttcaaaacggatgacgtatcgtatcctctgcatatcctgcaacgatacctgactgatacttcccgatacgtatcaagagagtatcca 46431951  T
Q  401 aatattaaattttatttt-ttaaaaaataattatccgatactttccgata 449  Q
    || |||||||||||||||   ||||||||||||||||||||||| |||||    
T  46431950 aagattaaattttattttaaaaaaaaataattatccgatacttttcgata 46431901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 310 - 475
Target Start/End: Complemental strand, 3403683 - 3403528
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    |||||||||||||||||||||| |||||||| || ||||||||||| |||||||          |||||||||||||| |||||||||||||||||||||    
T  3403683 atacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcactgatatct----------tcccgatacgtatccggagagtatccaaatattaaa 3403594  T
Q  410 ttttatttt-ttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    |||||||||   |||||||||||||||||||||||||||||||| |||||| |||| ||||||||||    
T  3403593 ttttattttaaaaaaaaataattatccgatactttccgatacat-ccgatatgcacggatacttgtg 3403528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 306 - 442
Target Start/End: Complemental strand, 36512046 - 36511908
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||| |||||||| ||||||| |||||||||||| ||||||  ||||||||| || |||||||||||| | ||||||||| || ||    
T  36512046 cccgatacttcaaaatggttgacgtattgtatcccgtgcgtatcctgcgccgatacttgcccgatactttccgatacgtatcagaagagtatccgaagat 36511947  T
Q  406 taaattttatttttt--aaaaaataattatccgatactt 442  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  36511946 taaattttatttttttaaaaaaataattatccgatactt 36511908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 40694076 - 40694221
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||| |||||||||||| ||||||| ||||||||||| |||   |||| ||||||||||||||| ||||||||||  || ||    
T  40694076 cccgatacttcaaaatggatgatgtatcgtatcccatgcgtattctgcaccgatacctgattgatacttcccgatacgtatcaggagagtatctgaagat 40694175  T
Q  406 taaatttta-ttttttaaaaaataattatccgatactttccgatac 450  Q
    ||||||||| ||||||| |||||||||||| ||||||| |||||||    
T  40694176 taaattttatttttttataaaataattatctgatacttcccgatac 40694221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 306 - 450
Target Start/End: Complemental strand, 38492371 - 38492236
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||||          |||||| |||||||||||||||||    
T  38492371 cccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgata----------cgtatccggagagtatccaaatat 38492282  T
Q  406 taaattttatt-ttttaaaaaataattatccgatactttccgatac 450  Q
    ||||||||||| |||||||||||||||||||||||| | |||||||    
T  38492281 taaattttatttttttaaaaaataattatccgatacatcccgatac 38492236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 311 - 452
Target Start/End: Complemental strand, 37992640 - 37992497
Alignment:
Q  311 tacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaat 410  Q
    |||||||||||||| ||||||| |||||||||||| ||| ||||||||||  || | |||| || |||||||||||| | |||||||||||| |||||||    
T  37992640 tacttcaaaatggaagacgtattgtatcccttgcggatcttgcaccgatacatgtctgatactttccgatacgtatcagaagagtatccaaagattaaat 37992541  T
Q  411 tttatttttt--aaaaaataattatccgatactttccgatacat 452  Q
    ||||||||||  ||||||||||||||||||| || |||||||||    
T  37992540 tttatttttttaaaaaaataattatccgataattcccgatacat 37992497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 387 - 475
Target Start/End: Original strand, 52572276 - 52572364
Alignment:
Q  387 ctggagagtatccaaatattaaattttattttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||| ||||||||||    
T  52572276 ctggagagtatccaaatattaaattttatttttaaaaaaataattatccgatactttccgatacgtcccaatacgcacggatacttgtg 52572364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 3403438 - 3403319
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||| ||||||| |||||||| |||||||||| ||||||||| ||| ||||||||| ||||||||||||||||||||| ||| ||    
T  3403438 cctttatctttctttggtgtcagtacgacccacaccacaccacacaaacaattgcatctttccctttctaagaaattagggtttcaactttttcttccaa 3403339  T
Q  663 agtggtcgccgtccactttg 682  Q
    |||||| |||||||||||||    
T  3403338 agtggttgccgtccactttg 3403319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 566 - 682
Target Start/End: Original strand, 31226594 - 31226711
Alignment:
Q  566 tttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaag 664  Q
    ||||||| |||||||||||||||||||||||| | |||||||||||||||||||| ||| ||||||| | |||||||| |||||||||||| ||  ||||    
T  31226594 tttatctttctttggtgccagtacggcccacatcacaccacacaaccaattgcatctttccctttctgagaaattaggttttcaactttttctttcaaag 31226693  T
Q  665 tggtcgccgtccactttg 682  Q
    ||||||||||||||||||    
T  31226694 tggtcgccgtccactttg 31226711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 306 - 452
Target Start/End: Original strand, 2586342 - 2586489
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||| ||||||||||||||| |||||||| || ||||||| |||||| | |||||||||| || || ||||||||| | ||||||||| || ||    
T  2586342 cccgatactttaaaatggatgacgtaccgtatcccctgagtatccttcaccgacacctgcccgatactttccaatacgtatcagaagagtatccgaagat 2586441  T
Q  406 t-aaattttattttttaaaaaataattatccgatactttccgatacat 452  Q
    | ||||||  ||||||||||||||||||||| |||||| |||||||||    
T  2586442 taaaatttgtttttttaaaaaataattatcctatacttcccgatacat 2586489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 5325577 - 5325458
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| |||||||| |||||||| |||||||| |||||||||||||||||||| ||| |||| |||| ||||||||||||||||||||| ||| ||    
T  5325577 cctttatctttctttggtaccagtacgacccacaccacaccacacaaccaattgcatctttcccttactaagaaattagggtttcaactttttcttccaa 5325478  T
Q  663 agtggtcgccgtccactttg 682  Q
    |||||||  |||||||||||    
T  5325477 agtggtcatcgtccactttg 5325458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 566 - 682
Target Start/End: Original strand, 52572451 - 52572563
Alignment:
Q  566 tttatctatctttggtgccagtacggcccacacccaccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaagt 665  Q
    ||||||| ||||||||||||||||| ||||||||    |||||| ||||||||| ||| ||||||||| ||||||||||||||||||||| ||| |||||    
T  52572451 tttatctttctttggtgccagtacgacccacacc----acacaaacaattgcatctttccctttctaagaaattagggtttcaactttttcttccaaagt 52572546  T
Q  666 ggtcgccgtccactttg 682  Q
    |||||||||||||||||    
T  52572547 ggtcgccgtccactttg 52572563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 310 - 443
Target Start/End: Original strand, 21058843 - 21058979
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    |||||| |||||| |||||||| |||||||  || ||||||||||||||||  || | ||||||||||||||||||||||||||||||||||| ||||||    
T  21058843 atactttaaaatgaatgacgtagcgtatccactgtgtatcctgcaccgatacatgtctgatatttcccgatacgtatctggagagtatccaaagattaaa 21058942  T
Q  410 t--ttta-ttttttaaaaaataattatccgatacttt 443  Q
    |  |||| |||||| ||||| ||||||||||||||||    
T  21058943 ttatttattttttttaaaaacaattatccgatacttt 21058979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 306 - 442
Target Start/End: Complemental strand, 55901251 - 55901114
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||| ||||| |||||||||||||||||| || ||||||||||||||||  | ||||||| ||| ||||||||||| ||| | ||||| || ||    
T  55901251 cccgatactttaaaatagatgacgtatcgtatcccctgtgtatcctgcaccgatacatacccgatacttctcgatacgtatcaggaaaatatccgaagat 55901152  T
Q  406 taaattttattttt-taaaaaataattatccgatactt 442  Q
    ||||||||||||||  |||||||||||||| |||||||    
T  55901151 taaattttatttttaaaaaaaataattatctgatactt 55901114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 14795261 - 14795380
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| |||||||||| |||||| |||||||| |||||||||||||||||||| ||| ||||  ||| ||||||||||||||||||||| ||| ||    
T  14795261 cctttatctttctttggtgctagtacgacccacaccacaccacacaaccaattgcatctttcccttattaagaaattagggtttcaactttttcttccaa 14795360  T
Q  663 agtggtcgccgtccactttg 682  Q
    |||||||  |||||||||||    
T  14795361 agtggtcatcgtccactttg 14795380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 366 - 456
Target Start/End: Original strand, 39957630 - 39957721
Alignment:
Q  366 ccgatatttcccgatacgtatctggagagtatccaaatattaaatttta-ttttttaaaaaataattatccgatactttccgatacatcccg 456  Q
    |||||| ||| ||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  39957630 ccgatacttctcgatacgtatccggagagtatccgaatattaaattttatttttttaaaaaataattatccgatactttccgatacgtcccg 39957721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 306 - 417
Target Start/End: Original strand, 47607116 - 47607226
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||| ||||||||| | ||||||||||||| ||||||||||| ||||||||| |||||||||| |||||| |||  || ||    
T  47607116 cccgatacttcaaaatggatgacatatcgtatctcctgcgtatcctgca-cgatatctgcctgatatttcctgatacgtatcaggagagcatctgaagat 47607214  T
Q  406 taaattttattt 417  Q
    ||||||||||||    
T  47607215 taaattttattt 47607226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 307 - 442
Target Start/End: Original strand, 17892255 - 17892391
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    |||||||||||||||||| |||||| |||||| | |||||||| | |||||||| |||||||||| ||||||||| ||||| | ||||||||| || |||    
T  17892255 ccgatacttcaaaatggacgacgtaccgtatctcatgcgtatcatacaccgatacctgcccgatacttcccgatatgtatcagaagagtatccgaagatt 17892354  T
Q  407 aaattttatttt-ttaaaaaataattatccgatactt 442  Q
    ||||||||||||   |||||||||||||  |||||||    
T  17892355 aaattttattttaaaaaaaaataattatatgatactt 17892391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 1176987 - 1177128
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||| | |||||||||||||||| | ||||||||||||| ||| |||||||||| || |||||| ||||| | ||||||||| ||  |    
T  1176987 cccgatacttcaaaatagttgacgtatcgtatcccctacgtatcctgcacccatacctgcccgatactttccgatatgtatcagaagagtatccgaaatt 1177086  T
Q  406 taaattttattttttaaaaaataattatccgatactttccgatac 450  Q
    |   |||||||||||   ||||||||||||||||||| |||||||    
T  1177087 t---ttttatttttttttaaataattatccgatacttcccgatac 1177128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 574 - 682
Target Start/End: Original strand, 41145877 - 41145986
Alignment:
Q  574 tctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaagtggtcgcc 672  Q
    ||||| ||| ||||||| |||||||| |||||||||| ||||||||| ||| ||||||||| ||||||||||||||||||||| ||| |||||||| | |    
T  41145877 tctttagtgtcagtacgacccacaccacaccacacaaacaattgcatctttccctttctaagaaattagggtttcaactttttcttccaaagtggttgtc 41145976  T
Q  673 gtccactttg 682  Q
    ||||||||||    
T  41145977 gtccactttg 41145986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 566 - 682
Target Start/End: Original strand, 53322596 - 53322713
Alignment:
Q  566 tttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaag 664  Q
    ||||||| |||||||||| ||||||  ||||||| |  ||||||| ||||||||| ||| ||||||||| ||||||||||||||||||||| ||| ||||    
T  53322596 tttatctttctttggtgcaagtacgaaccacaccacgacacacaaacaattgcatttttccctttctaagaaattagggtttcaactttttcttccaaag 53322695  T
Q  665 tggtcgccgtccactttg 682  Q
    ||||||||||||| ||||    
T  53322696 tggtcgccgtccagtttg 53322713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 376 - 451
Target Start/End: Original strand, 14795078 - 14795154
Alignment:
Q  376 ccgatacgtatctggagagtatccaaatattaaattttatt-ttttaaaaaataattatccgatactttccgataca 451  Q
    |||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||| | ||||||||    
T  14795078 ccgatacgtatccggagagtatccaaatattaaatttttttcttttaaaaaataattatccgatacatcccgataca 14795154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 309 - 439
Target Start/End: Original strand, 4400477 - 4400608
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    |||||||||||||| ||||   |||||||| | || ||||| || |||||||  || | |||| ||||||||||||||| ||||||||||  ||||||||    
T  4400477 gatacttcaaaatgaatgataaatcgtatctcctgtgtatcatgaaccgatacttgtctgatacttcccgatacgtatcaggagagtatcagaatattaa 4400576  T
Q  409 attttattttt-taaaaaataattatccgata 439  Q
    |||||||||||  |||||||||||||||||||    
T  4400577 attttatttttaaaaaaaataattatccgata 4400608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 308 - 442
Target Start/End: Complemental strand, 3109415 - 3109280
Alignment:
Q  308 cgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatta 407  Q
    |||||||| ||||||||| || || ||||| | |||||||| ||| ||||||| |||  ||||||||  ||||||||||| | ||| ||  | || ||||    
T  3109415 cgatactttaaaatggatcacataccgtattctttgcgtattctgtaccgatacctgttcgatatttttcgatacgtatcagaagattaatcgaagatta 3109316  T
Q  408 aattttattttttaaa-aaataattatccgatactt 442  Q
    |||||||||||||||| |||||||||||||||||||    
T  3109315 aattttattttttaaacaaataattatccgatactt 3109280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 5835085 - 5835204
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||||| || ||| |  |||||| || ||||| ||| ||  ||||| ||||||||||||||||||||||||| ||| ||    
T  5835085 cctttatctttctttggtgccagtacgacctacatcataccacagaaacaatttcatcttcccctttttaaaaaattagggtttcaactttttcttccaa 5835184  T
Q  663 agtggtcgccgtccactttg 682  Q
    ||||||| || |||||||||    
T  5835185 agtggtccccttccactttg 5835204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 306 - 360
Target Start/End: Original strand, 14795029 - 14795083
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgata 360  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  14795029 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgata 14795083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 309 - 443
Target Start/End: Original strand, 27981905 - 27982039
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    |||||||||||||||||||||||||||||| | |||| ||||| |||||||||||| | |||| ||  |||||||||||  ||||||||   || ||| |    
T  27981905 gatacttcaaaatggatgacgtatcgtatctcctgcgcatcctccaccgatatctgtctgatacttttcgatacgtatcaagagagtatttgaagattga 27982004  T
Q  409 attttattttttaaaaaataattatccgatacttt 443  Q
    | |||||||||| ||||| || |||  ||||||||    
T  27982005 aatttatttttttaaaaacaaatatatgatacttt 27982039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 306 - 399
Target Start/End: Original strand, 51858838 - 51858931
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcc-tgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcc 399  Q
    |||||||||| |||||||||||||||||||||| | ||||||||| |||| ||||| ||| | |||| ||||||||||||||| |||||||||||    
T  51858838 cccgatactttaaaatggatgacgtatcgtatctcctgcgtatccttgca-cgatacctgtctgatacttcccgatacgtatcaggagagtatcc 51858931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 391 - 450
Target Start/End: Original strand, 31226044 - 31226104
Alignment:
Q  391 agagtatccaaatattaaattttatttttt-aaaaaataattatccgatactttccgatac 450  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||    
T  31226044 agagtatccaaatattaaattttattttttcaaaaaataattatccgctattttccgatac 31226104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 373 - 443
Target Start/End: Original strand, 21637738 - 21637809
Alignment:
Q  373 ttcccgatacgtatctggagagtatccaaatattaaatttta-ttttttaaaaaataattatccgatacttt 443  Q
    ||||||||||||||| ||||||||||| || ||||||||||| |||||||||||| ||||||| ||||||||    
T  21637738 ttcccgatacgtatcaggagagtatccgaagattaaattttatttttttaaaaaacaattatctgatacttt 21637809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 376 - 450
Target Start/End: Complemental strand, 31946268 - 31946193
Alignment:
Q  376 ccgatacgtatctggagagtatccaaatattaaattttattttt-taaaaaataattatccgatactttccgatac 450  Q
    |||||||||||| | ||||||||| || ||||||||||||||||  |||||||||||||||||||||| |||||||    
T  31946268 ccgatacgtatcagaagagtatccgaagattaaattttatttttaaaaaaaataattatccgatacttcccgatac 31946193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 310 - 381
Target Start/End: Complemental strand, 44121950 - 44121879
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgata 381  Q
    ||||||||||||||| |||||||||||||   ||||||||||||||||||| |||||||||| |||| ||||    
T  44121950 atacttcaaaatggacgacgtatcgtatcttctgcgtatcctgcaccgatacctgcccgatacttcctgata 44121879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 308 - 360
Target Start/End: Complemental strand, 31946315 - 31946263
Alignment:
Q  308 cgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgata 360  Q
    |||||||| ||||||||||||||||||||| || |||||||||||||||||||    
T  31946315 cgatactttaaaatggatgacgtatcgtattccctgcgtatcctgcaccgata 31946263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 311 - 399
Target Start/End: Complemental strand, 44522084 - 44521996
Alignment:
Q  311 tacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcc 399  Q
    ||||||||||||||||| ||||  |||| | ||| ||| |||||||||||||||   ||||||| |||||||||||| |||||||||||    
T  44522084 tacttcaaaatggatgatgtattatatctcctgcatattctgcaccgatatctgtttgatattttccgatacgtatcaggagagtatcc 44521996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 565 - 631
Target Start/End: Original strand, 19738954 - 19739021
Alignment:
Q  565 ctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttct 631  Q
    |||||||| ||||||||||| ||||| |||||||| |||||||||||||||||||| ||| |||||||    
T  19738954 ctttatctttctttggtgcccgtacgacccacaccacaccacacaaccaattgcatatttccctttct 19739021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 366 - 442
Target Start/End: Complemental strand, 42630537 - 42630459
Alignment:
Q  366 ccgatatttcccgatacgtatctggagagtatccaaatattaaattttattttttaaaa--aataattatccgatactt 442  Q
    ||||||||| |||||||||||| ||||| ||||| || |||||||||||||||  ||||  ||||||||||||||||||    
T  42630537 ccgatattttccgatacgtatcaggagaatatccgaagattaaattttattttaaaaaaataataattatccgatactt 42630459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 377 - 442
Target Start/End: Complemental strand, 24793772 - 24793706
Alignment:
Q  377 cgatacgtatctggagagtatccaaatattaaattttattttttaa-aaaataattatccgatactt 442  Q
    ||||||||||| | ||||||||| || ||||||||||||||||||| |||||||||||| |||||||    
T  24793772 cgatacgtatcagaagagtatccgaagattaaattttattttttaaaaaaataattatctgatactt 24793706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 306 - 371
Target Start/End: Original strand, 10257706 - 10257771
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgata 371  Q
    |||||||||||||||||||||| |||||||||||  ||||||| ||| | ||||| ||||||||||    
T  10257706 cccgatacttcaaaatggatgatgtatcgtatccgctgcgtattctgtatcgatacctgcccgata 10257771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 565 - 631
Target Start/End: Complemental strand, 42472440 - 42472373
Alignment:
Q  565 ctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttct 631  Q
    |||||||| ||||| ||||| ||||| |||||||| |||||||||||||||||||| ||| |||||||    
T  42472440 ctttatctttctttagtgcccgtacgacccacaccacaccacacaaccaattgcatctttccctttct 42472373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 417 - 454
Target Start/End: Original strand, 24784357 - 24784394
Alignment:
Q  417 ttttaaaaaataattatccgatactttccgatacatcc 454  Q
    |||||||||||||||||| |||||||||||||||||||    
T  24784357 ttttaaaaaataattatcagatactttccgatacatcc 24784394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 375 - 442
Target Start/End: Original strand, 36943744 - 36943812
Alignment:
Q  375 cccgatacgtatctggagagtatccaaatattaaatttta-ttttttaaaaaataattatccgatactt 442  Q
    ||||||||||||| | ||||||||| || |||||| |||| |||||| ||||||||||||| |||||||    
T  36943744 cccgatacgtatcagaagagtatccgaagattaaaatttattttttttaaaaataattatctgatactt 36943812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 443
Target Start/End: Original strand, 49069269 - 49069324
Alignment:
Q  389 ggagagtatccaaatattaaattttatttt-ttaaaaaataattatccgatacttt 443  Q
    ||||||||| | || ||||||||||||||| |||||||| ||||||||||||||||    
T  49069269 ggagagtattcgaagattaaattttatttttttaaaaaacaattatccgatacttt 49069324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 632 - 682
Target Start/End: Original strand, 28377221 - 28377271
Alignment:
Q  632 aaaaaattagggtttcaactttttattctaaagtggtcgccgtccactttg 682  Q
    ||||||||||| |||||||||||| ||| ||| |||||||| |||||||||    
T  28377221 aaaaaattaggatttcaactttttcttccaaaatggtcgccttccactttg 28377271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 51674865 - 51674939
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgata 381  Q
    ||||||||||||||| |||||||||||||||| | ||| ||| |||||| ||||  || |||||| || ||||||    
T  51674865 ccgatacttcaaaatagatgacgtatcgtatctcctgcatattctgcactgatacttgtccgatactttccgata 51674939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 443 - 475
Target Start/End: Complemental strand, 38492253 - 38492221
Alignment:
Q  443 tccgatacatcccgatacgcacagatacttgtg 475  Q
    |||||||||||||||||||||| ||||||||||    
T  38492253 tccgatacatcccgatacgcacggatacttgtg 38492221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 443 - 475
Target Start/End: Complemental strand, 42472553 - 42472521
Alignment:
Q  443 tccgatacatcccgatacgcacagatacttgtg 475  Q
    |||||||||||||||||||||| ||||||||||    
T  42472553 tccgatacatcccgatacgcacggatacttgtg 42472521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 139; Significance: 2e-72; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 7876720 - 7876890
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  7876720 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatat 7876819  T
Q  406 taaattttatttttt-aaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7876820 taaattttattttttaaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtg 7876890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 16561806 - 16561976
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  16561806 cccgatacttcaaaatggatgacgtaccgtatcccttgcgtattctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatat 16561905  T
Q  406 taaatttta-ttttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||| ||||||| ||||||||| |||||| |||||||||||||||| |||||||| ||||||||||    
T  16561906 taaattttatttttttataaaataattgtccgatgctttccgatacatcccaatacgcacggatacttgtg 16561976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 40309009 - 40308839
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||| ||||||||| |||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  40309009 cccgatacttcaaaatagatgacgtaccgtatcccatgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatat 40308910  T
Q  406 taaattttattttt-taaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||  ||||||||||||||||||||||| | |||||||||||||||||| ||||||||||    
T  40308909 taaattttatttttaaaaaaaataattatccgatacttttcaatacatcccgatacgcacggatacttgtg 40308839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 7807486 - 7807316
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||||||||||| |||||||| || ||||||| |||  ||||| ||||||||||||||| ||| |||||||||||||    
T  7807486 cccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcttgtaccgatacctgttcgatacttcccgatacgtatccggaaagtatccaaatat 7807387  T
Q  406 taaattttatt-ttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  7807386 taaattttatttttttaaaaaataactatccgatactttccgatacatcccgatacgcacggatacttgtg 7807316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 33324824 - 33324994
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  33324824 cccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatat 33324923  T
Q  406 taaattttattttt-taaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||| || |||||||||| ||||||||||    
T  33324924 taaattttatttttaaaaaaaataattatctgatactttccgatacgtctcgatacgcacggatacttgtg 33324994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 38602434 - 38602264
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  38602434 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatat 38602335  T
Q  406 taaattttattttt-taaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||  |||||||||||||| |||||||||| |||| || |||||||||| ||||||||||    
T  38602334 taaattttatttttaaaaaaaataattatctgatactttccaatacgtctcgatacgcacggatacttgtg 38602264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 6124179 - 6124349
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||| |||||||||||||||| ||||||| || ||||||||||||||||  || |||||| |||| |||||||||| |||||||||||||||||    
T  6124179 cccgatactttaaaatggatgacgtattgtatcccctgtgtatcctgcaccgatacatgtccgatacttcctgatacgtatccggagagtatccaaatat 6124278  T
Q  406 taaattttatttttt-aaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  6124279 taaattttattttttaaaaaaataattatccgatactttgcgatacatcccgatacgcacggatacttgtg 6124349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 301 - 475
Target Start/End: Original strand, 18300972 - 18301148
Alignment:
Q  301 tgaagccc-gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcc 399  Q
    |||||||| |||||||||||||||||||||||||||||||| || |||| ||||||||||| ||| | |||| ||| ||||||||||| |||||||||||    
T  18300972 tgaagccctgatacttcaaaatggatgacgtatcgtatcccctgtgtattctgcaccgatacctgtctgatacttctcgatacgtatcgggagagtatcc 18301071  T
Q  400 aaatattaaattttattttttaa-aaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||||||||||| ||||||||| | |||||||||||||||| ||||||||||||| ||||||||||    
T  18301072 aaatattaaattttattttttaagaaaataatttttcgatactttccgatacgtcccgatacgcacggatacttgtg 18301148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 307 - 440
Target Start/End: Complemental strand, 4170613 - 4170479
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||| |||| ||||||||||||||| ||||||||||||||||||    
T  4170613 ccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcctgatacttcccgatacgtatccggagagtatccaaatatt 4170514  T
Q  407 aaattttattttt-taaaaaataattatccgatac 440  Q
    |||||||||||||  ||||||||||||||||||||    
T  4170513 aaattttatttttaaaaaaaataattatccgatac 4170479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 301 - 475
Target Start/End: Original strand, 22570937 - 22571114
Alignment:
Q  301 tgaagccc-gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcc 399  Q
    |||||||| ||||||||||||| ||||||||| |||||||  ||||||||||||||||||| |||||||||| |||| |||||||||| || ||||||||    
T  22570937 tgaagcccagatacttcaaaatagatgacgtaccgtatcctctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggggagtatcc 22571036  T
Q  400 aaatattaaattttattt--tttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||||||     |||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||    
T  22571037 aaatattaaattttatttaaaaaaaaaaataataatctgatactttccgatacatcccgatacgcacggatacttgtg 22571114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 22484273 - 22484418
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||| ||| ||||| || ||||||||||||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||    
T  22484273 cccgatacttcaaaatggatgatgtaccgtattccctgcgtatcctgcatcgatatctgtccgatacttcccgatacgtatccggagagtatccaaatat 22484372  T
Q  406 taaatttta-ttttttaaaaaataattatccgatactttccgatac 450  Q
    ||||||||| |||||||||||||||||||||||||| | |||||||    
T  22484373 taaattttatttttttaaaaaataattatccgatacatcccgatac 22484418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 306 - 440
Target Start/End: Complemental strand, 6497761 - 6497626
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||| | |||  ||||||||||||||| |||||||||||||||||    
T  6497761 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgtctgattcttcccgatacgtatccggagagtatccaaatat 6497662  T
Q  406 taaattttattttttaa-aaaataattatccgatac 440  Q
    ||||||||||||||||| ||||||||||||||||||    
T  6497661 taaattttattttttaaaaaaataattatccgatac 6497626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 308 - 450
Target Start/End: Original strand, 4355333 - 4355476
Alignment:
Q  308 cgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatta 407  Q
    |||||||||||||||||||||||||||||| || ||||||| ||||||||||| ||||  |||| ||||||||||||||| ||||||||| |||| ||||    
T  4355333 cgatacttcaaaatggatgacgtatcgtattccctgcgtattctgcaccgatacctgcttgatacttcccgatacgtatcaggagagtatgcaaagatta 4355432  T
Q  408 aattttattttttaaaaaa-taattatccgatactttccgatac 450  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  4355433 aattttattttttaaaaaactaattatccgatacttcccgatac 4355476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 306 - 452
Target Start/End: Complemental strand, 8483029 - 8482882
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| | |||| || |||||||||||| | ||||||||| || ||    
T  8483029 cccgatacttcaaaatgaatgacgtatcgtatcctttgcgtatcctgcaccgatatctgtctgatactttccgatacgtatcagaagagtatccgaagat 8482930  T
Q  406 taaattttatt-ttttaaaaaataattatccgatactttccgatacat 452  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||||||    
T  8482929 taaattttatttttttaaaaaataattatccgatacttcgcgatacat 8482882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 307 - 442
Target Start/End: Original strand, 34146187 - 34146323
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    ||||||||| ||||||||||||||||||||||   ||||||| ||||||||||||||||| |||| ||||||||||||||| |||||||||||||| |||    
T  34146187 ccgatactttaaaatggatgacgtatcgtatcttctgcgtattctgcaccgatatctgcctgatacttcccgatacgtatcaggagagtatccaaagatt 34146286  T
Q  407 aaattttattttt-taaaaaataattatccgatactt 442  Q
    |||||||||||||  ||||||||||||||||||||||    
T  34146287 aaattttatttttaaaaaaaataattatccgatactt 34146323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 310 - 450
Target Start/End: Original strand, 4561798 - 4561940
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||| |||||||||| |||| | ||||||||| || ||||||    
T  4561798 atacttcaaaatggatgacgtatcgtattccttgtgtatcctgcaccgatacctgcccgatacttcccgatacatatcagaagagtatccgaagattaaa 4561897  T
Q  410 ttttatttttt--aaaaaataattatccgatactttccgatac 450  Q
    |||||||||||  |||||||||||||| ||||||| |||||||    
T  4561898 ttttatttttttaaaaaaataattatctgatacttcccgatac 4561940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 6124441 - 6124560
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||| ||    
T  6124441 cctttatctatctttggtgccagtacgacccacaccacaccacacaaccaattgcatctttccctttctaagaaattagggtttcaactttttcttccaa 6124540  T
Q  663 agtggtcgccgtccactttg 682  Q
    ||||||||| ||||||||||    
T  6124541 agtggtcgctgtccactttg 6124560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 35342323 - 35342469
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| || || |||| |||||||||||||||   ||||||||| || ||    
T  35342323 cccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatacctacctgatacttcccgatacgtatcaaaagagtatccgaagat 35342422  T
Q  406 taaattttattttt--taaaaaataattatccgatactttccgatac 450  Q
    ||||||||||||||   |||||||||||||| ||||||| |||||||    
T  35342423 taaattttatttttaaaaaaaaataattatctgatacttcccgatac 35342469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 306 - 450
Target Start/End: Complemental strand, 1776548 - 1776403
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||  || |||||||||||| | ||||||||| || ||    
T  1776548 cccgatacttcaaaatggttgacgtatcgtatcccttgcgtattctgcaccgatacctgcccgatcatttccgatacgtatcagaagagtatccgaagat 1776449  T
Q  406 taaattttattttttaa-aaaataattatccgatactttccgatac 450  Q
    ||||||||||||||||| |||| ||| || |||||||| |||||||    
T  1776448 taaattttattttttaaaaaaaaaatcattcgatacttcccgatac 1776403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 2319281 - 2319426
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||  |||  |||| |||| |||||||||| | ||||||||| || ||    
T  2319281 cccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcttgcaccgatacttgcttgatacttcctgatacgtatcagaagagtatccgaagat 2319380  T
Q  406 taaatttta-ttttttaaaaaataattatccgatactttccgatac 450  Q
    ||||||||| |||||||||||||||||||||||||| | |||||||    
T  2319381 taaattttatttttttaaaaaataattatccgatacgtcccgatac 2319426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 306 - 450
Target Start/End: Complemental strand, 45159410 - 45159276
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||          |||||||||||| ||||||| | |||||    
T  45159410 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcttgcaccaatatctgccc----------gatacgtatctgaagagtattcgaatat 45159321  T
Q  406 taaattttattttttaaaaaataattatccgatactttccgatac 450  Q
    |||||||||||||| |||||||| |||||||||||||||||||||    
T  45159320 taaattttatttttaaaaaaatacttatccgatactttccgatac 45159276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 306 - 442
Target Start/End: Original strand, 44156603 - 44156741
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| |||| |||||  || | |||| ||||||||||||||| ||||||||||| || ||    
T  44156603 cccgatacttcaaaatggatgacatatcgtatcccctgcgtatcatgcatcgatacatgtctgatacttcccgatacgtatcaggagagtatccgaagat 44156702  T
Q  406 taaatttta--ttttttaaaaaataattatccgatactt 442  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  44156703 taaattttattttttttaaaaaataattatccgatactt 44156741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 306 - 450
Target Start/End: Complemental strand, 28746764 - 28746623
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||| ||  ||||||||||| | ||||||||| || ||    
T  28746764 cccgatacttcaaaatggttgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttttcgatacgtatcagaagagtatccgaagat 28746665  T
Q  406 taaattttattttttaaaaaataattatccgatactttccgatac 450  Q
    ||| |||| ||||||   ||||||||||||||||||| |||||||    
T  28746664 taatttttttttttt---aaataattatccgatacttcccgatac 28746623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 308 - 450
Target Start/End: Original strand, 35996651 - 35996793
Alignment:
Q  308 cgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatta 407  Q
    ||||||||||||||| |||| |||| ||||||| |||||||| |||||||||| |||  ||||| ||  ||||||||||| ||||||||| | || ||||    
T  35996651 cgatacttcaaaatgaatgatgtattgtatcccctgcgtatcttgcaccgatacctgttcgatacttttcgatacgtatcaggagagtattcgaagatta 35996750  T
Q  408 aattttattttttaaaaaataattatccgatactttccgatac 450  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  35996751 aattttattttttaaaaaataattatccgatacttcccgatac 35996793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 306 - 450
Target Start/End: Complemental strand, 31236298 - 31236153
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||| ||||||||| |||||| ||||||| ||||||||||||||| | | ||||  |||||||||||||||||||| ||||||||||| || ||    
T  31236298 cccgatactttaaaatggataacgtattgtatcccctgcgtatcctgcacccacacctgcatgatatttcccgatacgtatcaggagagtatccgaagat 31236199  T
Q  406 taaatttt-attttttaaaaaataattatccgatactttccgatac 450  Q
    |||||||| ||||||||||||||||| | ||||||||| |||||||    
T  31236198 taaattttaattttttaaaaaataatcagccgatacttcccgatac 31236153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 307 - 450
Target Start/End: Complemental strand, 14217265 - 14217117
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    |||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||   |||| || ||||||||||||||||||||||| ||| |||    
T  14217265 ccgatacttcaaaatggatgacgtattgtatcccctgcgtattctgcaccgatatctgtttgatactttccgatacgtatctggagagtatctaaagatt 14217166  T
Q  407 aaattttattttttaa-----aaaataattatccgatactttccgatac 450  Q
    ||||||| ||||||       |||||||||||||||||||| |||||||    
T  14217165 aaattttttttttttttttttaaaataattatccgatacttcccgatac 14217117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 40308701 - 40308583
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||| ||||||||||| |||||||| || ||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||| ||    
T  40308701 cctttatctttctttagtgccagtacgacccacaccacatcacacaaccaattgcatcttt-cctttctaagaaattagggtttcaactttttcttccaa 40308603  T
Q  663 agtggtcgccgtccactttg 682  Q
    ||||||||||||||||||||    
T  40308602 agtggtcgccgtccactttg 40308583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 310 - 439
Target Start/End: Original strand, 21104492 - 21104622
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    |||||| |||||||||||||||||||||||  |||||||| |||||||||||||| | ||||||||||||||||||||    |||||||| || ||||||    
T  21104492 atactttaaaatggatgacgtatcgtatcctctgcgtatcttgcaccgatatctgtctgatatttcccgatacgtatcaaaggagtatccgaagattaaa 21104591  T
Q  410 tttta-ttttttaaaaaataattatccgata 439  Q
    || || |||||| ||||||||||||||||||    
T  21104592 ttatactttttttaaaaataattatccgata 21104622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 4170374 - 4170260
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacccaccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaa 663  Q
    ||||||||| ||||||||| ||||||| ||||||||    |||||| ||||||||| ||| ||||||||| ||||||||||||||||||||| ||| |||    
T  4170374 cctttatctttctttggtgtcagtacgacccacacc----acacaaacaattgcatctttccctttctaagaaattagggtttcaactttttcttccaaa 4170279  T
Q  664 gtggtcgccgtccactttg 682  Q
    |||||||||||||||||||    
T  4170278 gtggtcgccgtccactttg 4170260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 6497524 - 6497410
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacccaccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaa 663  Q
    ||||||||| ||||||||||||||||| ||||||||    ||||||  |||||||| ||| ||||||||| ||||||||||||||||||||| ||| |||    
T  6497524 cctttatctttctttggtgccagtacgacccacacc----acacaaaaaattgcatctttccctttctaagaaattagggtttcaactttttcttccaaa 6497429  T
Q  664 gtggtcgccgtccactttg 682  Q
    |||||||||||||||||||    
T  6497428 gtggtcgccgtccactttg 6497410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 306 - 421
Target Start/End: Original strand, 24585536 - 24585650
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||| | |||| |||| |||||||||| |||| ||||||||| ||    
T  24585536 cccgatacttcaaaatggatgatgtatcgtatccct-gcgtatcctgcaccgatacctgtctgatacttccagatacgtatcaggagtgtatccaaagat 24585634  T
Q  406 taaattttatttttta 421  Q
    ||| |||| |||||||    
T  24585635 taatttttttttttta 24585650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 309 - 442
Target Start/End: Original strand, 1005522 - 1005655
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||  ||||| ||||||||||||||  | ||||||||  || |||||    
T  1005522 gatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctg-tcgatacttcccgatacgtattagaagagtatctgaagattaa 1005620  T
Q  409 attttattt-tttaaaaaataattatccgatactt 442  Q
    ||||||||| |||   ||||||||||| |||||||    
T  1005621 attttatttattttttaaataattatctgatactt 1005655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 22484520 - 22484640
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaacc-aattgcatgttttcctttctaaaaaattagggtttcaactttttattcta 661  Q
    ||||||||| ||||||||||||||||| |||||||| |||||||||||| |||| ||| ||| |||| |||| |||||| |||||||||||||| ||| |    
T  22484520 cctttatctttctttggtgccagtacgacccacaccacaccacacaacccaattacatctttcccttactaagaaattaaggtttcaactttttcttcca 22484619  T
Q  662 aagtggtcgccgtccactttg 682  Q
    |||||||| ||||||||||||    
T  22484620 aagtggtcaccgtccactttg 22484640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 317 - 443
Target Start/End: Complemental strand, 40497486 - 40497363
Alignment:
Q  317 aaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaattttatt 416  Q
    ||||||||||||||| | |||||| |||||||| ||||  |||| ||| | |||| ||||||||||||||| |||||||||||||| |||||||||||||    
T  40497486 aaaatggatgacgtaccttatcccctgcgtatcttgcagtgatacctgtctgatacttcccgatacgtatcaggagagtatccaaagattaaattttatt 40497387  T
Q  417 ttttaaaaaataattatccgatacttt 443  Q
    |||   |||| ||||||||||||||||    
T  40497386 ttt---aaaacaattatccgatacttt 40497363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 18301237 - 18301356
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||||| ||||||||  |||||| || ||||| ||| ||  ||||||||||||||||||||||||||||||| ||| ||    
T  18301237 cctttatctttctttggtgccagtacgacccacaccataccacagaaacaatttcatcttcccctttctaaaaaattagggtttcaactttttcttccaa 18301336  T
Q  663 agtggtcgccgtccactttg 682  Q
    | |||||||| |||||||||    
T  18301337 aatggtcgccttccactttg 18301356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 20536781 - 20536916
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||           || ||||||||||||| | |||||||||||||||    
T  20536781 cccgatacttcaaaatggatgacgtatcgtatcccctgcatatcctgcaccgata----------cttgcccgatacgtatcggaagagtatccaaatat 20536870  T
Q  406 taaattttattttt-taaaaaataattatccgatactttccgatac 450  Q
    ||||||||||||||  ||||||||| | |||||||| | |||||||    
T  20536871 taaattttatttttaaaaaaaataaatttccgatacgtcccgatac 20536916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 310 - 433
Target Start/End: Original strand, 25933575 - 25933699
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    |||||||||||||||||| |||||||||||| |||||||| |||||| ||||||  | |||| ||| ||||||  ||| ||||||||||| || ||||||    
T  25933575 atacttcaaaatggatgatgtatcgtatcccctgcgtatcatgcaccaatatctatctgatacttctcgatacagatcaggagagtatccgaagattaaa 25933674  T
Q  410 ttttatttttt-aaaaaataattat 433  Q
    ||| ||||||| |||||||||||||    
T  25933675 tttaattttttgaaaaaataattat 25933699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 308 - 452
Target Start/End: Complemental strand, 3545691 - 3545545
Alignment:
Q  308 cgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatta 407  Q
    |||||||||||||||||||||||||||||||  || ||||| |||||||||||  || | |||| ||| ||||| ||||| |||||| |||| || ||||    
T  3545691 cgatacttcaaaatggatgacgtatcgtatcttttacgtattctgcaccgatacttgtctgatacttctcgatatgtatcaggagagcatccgaagatta 3545592  T
Q  408 aattttattttttaaaa--aataattatccgatactttccgatacat 452  Q
    |||||||||||  ||||  |||||||||| ||| ||| |||||||||    
T  3545591 aattttattttaaaaaaataataattatcagatgcttcccgatacat 3545545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 43214581 - 43214682
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatac--gtatctggagagtatccaaatatt 406  Q
    |||||||||||||||||||||||||||||||| || |||||||||| ||||||||| |||||| ||||||||||   |||| ||||||||||| || |||    
T  43214581 gatacttcaaaatggatgacgtatcgtatcccatgtgtatcctgcatcgatatctgaccgatacttcccgatacatatatcaggagagtatccgaagatt 43214680  T
Q  407 aa 408  Q
    ||    
T  43214681 aa 43214682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 309 - 417
Target Start/End: Complemental strand, 37134407 - 37134299
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    ||||||||||||| ||||||||| |||||||  |||||||||||||| |||||||||  |||| |||||||||||||||  ||||||||   || |||||    
T  37134407 gatacttcaaaatagatgacgtaccgtatcctctgcgtatcctgcactgatatctgcttgatacttcccgatacgtatcaagagagtatatgaagattaa 37134308  T
Q  409 attttattt 417  Q
    |||||||||    
T  37134307 attttattt 37134299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 368 - 450
Target Start/End: Original strand, 3563908 - 3563991
Alignment:
Q  368 gatatttcccgatacgtatctggagagtatccaaatattaaattttattt-tttaaaaaataattatccgatactttccgatac 450  Q
    |||| ||||||||||||||| ||||||||||| || |||||||||||||| ||||||||||||||||| ||||||| |||||||    
T  3563908 gatacttcccgatacgtatcaggagagtatccgaagattaaattttatttctttaaaaaataattatctgatacttcccgatac 3563991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 311 - 439
Target Start/End: Original strand, 12206036 - 12206164
Alignment:
Q  311 tacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaat 410  Q
    ||||| ||||||||||||||||||||||   || ||||| |||| ||||| ||||| |||||||  | ||||||||| ||||||||| | || |||||||    
T  12206036 tactttaaaatggatgacgtatcgtatcatctgtgtatcttgcatcgatacctgcctgatatttttcaatacgtatcaggagagtattcgaagattaaat 12206135  T
Q  411 tttattttttaaaaaataattatccgata 439  Q
    |||||||   ||| |||||||||||||||    
T  12206136 tttatttaaaaaataataattatccgata 12206164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 14824154 - 14824290
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||           | |||||||||| | ||||||||| || ||    
T  14824154 cccgatacttcaaaatagatgacgtatcgtatctcttgcgtatcatgcaccgatatctg----------tctgatacgtatcagaagagtatccgaagat 14824243  T
Q  406 taaattttatttt--ttaaaaaataattatccgatactttccgatac 450  Q
    |||||||||||||    ||||||||||||||||||| || |||||||    
T  14824244 taaattttattttaaaaaaaaaataattatccgatatttcccgatac 14824290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 5371217 - 5371336
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||| ||||||| ||||||||  |||||| || ||||| ||| ||  ||||| ||||||||||||||||||||||||| ||| ||    
T  5371217 cctttatctttctttggtgtcagtacgacccacaccataccacataaacaatttcatcttcccctttttaaaaaattagggtttcaactttttcttccaa 5371316  T
Q  663 agtggtcgccgtccactttg 682  Q
    | |||| ||| |||||||||    
T  5371317 aatggttgccttccactttg 5371336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 566 - 682
Target Start/End: Original strand, 12819459 - 12819576
Alignment:
Q  566 tttatctatctttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaag 664  Q
    ||||||| ||||||||||| ||||| |||||| |  |||||| || ||||| ||| ||  ||||| |||||||||||||||||||| |||| ||| |||     
T  12819459 tttatctttctttggtgccggtacgacccacatcataccacagaaacaatttcatcttcccctttttaaaaaattagggtttcaaccttttcttccaaaa 12819558  T
Q  665 tggtcgccgtccactttg 682  Q
    |||||||| |||||||||    
T  12819559 tggtcgccttccactttg 12819576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 564 - 631
Target Start/End: Original strand, 16562064 - 16562132
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttct 631  Q
    ||||||||| |||||||||| |||||| |||||||| |||||||||||||||||||| ||| |||||||    
T  16562064 cctttatctttctttggtgctagtacgacccacaccacaccacacaaccaattgcatctttccctttct 16562132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 565 - 631
Target Start/End: Original strand, 7876970 - 7877037
Alignment:
Q  565 ctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttct 631  Q
    |||||||| ||||||||||| ||||| |||||||| |||||||||||||||||||| ||| |||||||    
T  7876970 ctttatctttctttggtgcccgtacgacccacaccacaccacacaaccaattgcatctttccctttct 7877037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 307 - 401
Target Start/End: Original strand, 5588114 - 5588208
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaa 401  Q
    |||||||||||||||||||||||||||||||||  |  ||||| |||||||||| ||| |  ||| |||| ||||| ||||  ||||||||||||    
T  5588114 ccgatacttcaaaatggatgacgtatcgtatcctctttgtatcttgcaccgatacctgtctcatacttcctgatacatatcatgagagtatccaa 5588208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 310 - 440
Target Start/End: Original strand, 9293129 - 9293256
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    |||||| ||||||||||||||||  ||||||||| ||||| || | ||||||||    ||||||||||||||||| |   |||| ||||  || |||| |    
T  9293129 atactttaaaatggatgacgtatgatatcccttgtgtatcatgtatcgatatct----gatatttcccgatacgttttaagagattatcataagattata 9293224  T
Q  410 tttta-ttttttaaaaaataattatccgatac 440  Q
    ||||| |||||||||||||||||||| |||||    
T  9293225 ttttatttttttaaaaaataattatctgatac 9293256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 629
Target Start/End: Original strand, 22571205 - 22571266
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacccaccacacaaccaattgcatgttttccttt 629  Q
    ||||||||| ||||||||||||||||| ||||    |||||||||||||||||||| |||||||||    
T  22571205 cctttatctttctttggtgccagtacgaccca----caccacacaaccaattgcatattttccttt 22571266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 20536980 - 20537098
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacaccca-ccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||| | ||| ||| |||||||| | ||| |||| ||||| ||| ||  ||||||||||||||||||||||||| ||||| ||  ||    
T  20536980 cctttatctttctttggggacag-acgacccacaccaaaccaaacaaacaatttcatcttcccctttctaaaaaattagggtttcaattttttttttcaa 20537078  T
Q  663 agtggtcgccgtccactttg 682  Q
    | |||||||| |||||||||    
T  20537079 aatggtcgccttccactttg 20537098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 306 - 340
Target Start/End: Original strand, 3563857 - 3563891
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatccc 340  Q
    ||||||||||||||||||||||||||| |||||||    
T  3563857 cccgatacttcaaaatggatgacgtattgtatccc 3563891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 403 - 451
Target Start/End: Original strand, 5371057 - 5371106
Alignment:
Q  403 tattaaattttattttttaa-aaaataattatccgatactttccgataca 451  Q
    |||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  5371057 tattaaattttattttttaagaaaataattttccgatacgtcccgataca 5371106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 12819301 - 12819354
Alignment:
Q  301 tgaagccc-gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgc 353  Q
    |||||||| ||||||||||||||||||| ||| |||||||| || |||||||||    
T  12819301 tgaagccctgatacttcaaaatggatgatgtaccgtatcccctgtgtatcctgc 12819354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 399
Target Start/End: Original strand, 14824274 - 14824307
Alignment:
Q  366 ccgatatttcccgatacgtatctggagagtatcc 399  Q
    |||||||||||||||||||||| |||||||||||    
T  14824274 ccgatatttcccgatacgtatcaggagagtatcc 14824307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 371
Target Start/End: Original strand, 40536252 - 40536313
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgata 371  Q
    |||||||||||||| | |||||  ||||| | ||||||||||||||||||| || |||||||    
T  40536252 atacttcaaaatgggtaacgtactgtatcacatgcgtatcctgcaccgatacctacccgata 40536313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 139; Significance: 2e-72; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 37104126 - 37104296
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||| |||||||||| |||||||||||||||||    
T  37104126 cccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggagagtatccaaatat 37104225  T
Q  406 taaattttatttttt-aaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37104226 taaattttattttttaaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtg 37104296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 28949353 - 28949183
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| |||| |||||||||| |||||||||||||||||    
T  28949353 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggagagtatccaaatat 28949254  T
Q  406 taaattttatt-ttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28949253 taaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacacacagatacttgtg 28949183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 6916986 - 6916816
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| || |||||||||||| |||||||||| ||||||    
T  6916986 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatctaaatat 6916887  T
Q  406 taaattttatt-ttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6916886 taaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtg 6916816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 38330433 - 38330603
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| || |||||||||||| |||||||||| ||||||    
T  38330433 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatctaaatat 38330532  T
Q  406 taaatttta-ttttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38330533 taaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtg 38330603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 52895825 - 52895655
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| || |||||||||||| |||||||||| ||||||    
T  52895825 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatctaaatat 52895726  T
Q  406 taaattttatt-ttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  52895725 taaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtg 52895655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 310 - 475
Target Start/End: Original strand, 1036469 - 1036635
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| || |||||||||||| |||||||||||||||||||||    
T  1036469 atacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatccaaatattaaa 1036568  T
Q  410 ttttatttttt-aaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||| |||||||||||||| ||||||||||||||| || |||||||||| ||||||||||    
T  1036569 ttttattttttaaaaaaataattatctgatactttccgatacgtctcgatacgcacggatacttgtg 1036635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 1043233 - 1043403
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  1043233 cccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatat 1043332  T
Q  406 taaattttattttt-taaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||| || |||||||||| ||||||||||    
T  1043333 taaattttatttttaaaaaaaataattatctgatactttccgatacgtctcgatacgcacggatacttgtg 1043403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 3426854 - 3427024
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||| |||||||||||||||| ||||||| |||||||||||||||||||  || |||||| |||| |||||||||| |||||||||||||||||    
T  3426854 cccgatactttaaaatggatgacgtattgtatcccctgcgtatcctgcaccgatacatgtccgatacttcctgatacgtatccggagagtatccaaatat 3426953  T
Q  406 taaattttatttttt-aaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  3426954 taaattttattttttaaaaaaataattatccgatactttgcgatacatcccgatacgcacggatacttgtg 3427024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 307 - 475
Target Start/End: Original strand, 38948739 - 38948908
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    ||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||| ||| ||| ||||||||||| | ||| ||||||||||||    
T  38948739 ccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatatctgcccaatacttctcgatacgtatccgaagaatatccaaatatt 38948838  T
Q  407 aaatttta-ttttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  38948839 aaattttatttttttaaaaaataattatacgatactttccgatacatcccgatacgcacggatacttgtg 38948908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 306 - 450
Target Start/End: Complemental strand, 20409666 - 20409521
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  20409666 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatat 20409567  T
Q  406 taaattttatt-ttttaaaaaataattatccgatactttccgatac 450  Q
    ||||||||||| |||||||||||||||||||||||| | |||||||    
T  20409566 taaattttatttttttaaaaaataattatccgatacatcccgatac 20409521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 309 - 475
Target Start/End: Complemental strand, 36367801 - 36367644
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    |||||||||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||||          |||||| ||||||||||||||||||||    
T  36367801 gatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgata----------cgtatccggagagtatccaaatattaa 36367712  T
Q  409 attttatttttt-aaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36367711 attttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtg 36367644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 30323721 - 30323867
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||| | ||||| |  || ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30323721 cccgatacttcaaaatggatgacgcaacgtattctctgtgtatcctgcactgatatctgcccgatacttcccgatacgtatctggagagtatccaaatat 30323820  T
Q  406 taaattttatttttt--aaaaaataattatccgatactttccgatac 450  Q
    |||||||||||||||  ||||||||||||||||||| ||||||||||    
T  30323821 taaattttatttttttaaaaaaataattatccgatattttccgatac 30323867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 306 - 440
Target Start/End: Complemental strand, 37346960 - 37346825
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||||||    
T  37346960 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggggagtatccaaatat 37346861  T
Q  406 taaattttattttttaa-aaaataattatccgatac 440  Q
    ||||||||||||||||| ||||||||| ||||||||    
T  37346860 taaattttattttttaagaaaataattttccgatac 37346825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 301 - 440
Target Start/End: Complemental strand, 31653520 - 31653379
Alignment:
Q  301 tgaagccc-gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcc 399  Q
    |||||||| ||||||||||||||||| | ||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  31653520 tgaagccctgatacttcaaaatggataatgtatcgtatcccttgtgtatcatgcaccgatatctgcccgatacttcccgatacgtatcgggagagtatcc 31653421  T
Q  400 aaatattaaattttattttttaa-aaaataattatccgatac 440  Q
    ||||||||||||||||||||||| ||||||||| ||||||||    
T  31653420 aaatattaaattttattttttaagaaaataattttccgatac 31653379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 306 - 440
Target Start/End: Original strand, 43189661 - 43189796
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||| |||||||||| ||| ||||||||||| |||||||||||||||||    
T  43189661 cccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttctcgatacgtatcaggagagtatccaaatat 43189760  T
Q  406 taaattttattttttaa-aaaataattatccgatac 440  Q
    |||||||| |||||||| ||||||||| ||||||||    
T  43189761 taaatttttttttttaagaaaataattttccgatac 43189796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 307 - 440
Target Start/End: Original strand, 8132190 - 8132324
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    ||||||||||||||| ||||||||| |||||||| |||||||||||||||||||  ||  ||||| ||||||||||||||| ||||||||||||||||||    
T  8132190 ccgatacttcaaaatagatgacgtaccgtatcccctgcgtatcctgcaccgatacatgttcgatacttcccgatacgtatccggagagtatccaaatatt 8132289  T
Q  407 aaatttta-ttttttaaaaaataattatccgatac 440  Q
    |||||||| ||||||||||||||||||||||||||    
T  8132290 aaattttatttttttaaaaaataattatccgatac 8132324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 310 - 450
Target Start/End: Complemental strand, 13013100 - 13012959
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    ||||||||||||||||||| ||||||||||| || ||||| ||||| |||| |||||||||| ||||||||||||||| |||||||||||||||||||||    
T  13013100 atacttcaaaatggatgacatatcgtatcccctgtgtatcatgcactgatacctgcccgatacttcccgatacgtatcgggagagtatccaaatattaaa 13013001  T
Q  410 ttttattttttaa-aaaataattatccgatactttccgatac 450  Q
    ||||||||||||| ||||||||| |||||||| | |||||||    
T  13013000 ttttattttttaagaaaataattttccgatacgtcccgatac 13012959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 309 - 450
Target Start/End: Complemental strand, 28659409 - 28659267
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    ||||||| |||||||||||||||  |||| || |||||||| ||||||||||  ||||||||| || |||||||||||| ||||||||||||||||||||    
T  28659409 gatactttaaaatggatgacgtacggtattccctgcgtatcatgcaccgatacatgcccgatactttccgatacgtatccggagagtatccaaatattaa 28659310  T
Q  409 attttatt-ttttaaaaaataattatccgatactttccgatac 450  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  28659309 attttatttttttaaaaaataattatccgatacgttccgatac 28659267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 3427114 - 3427233
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||| ||    
T  3427114 cctttatctatctttggtgccagtacgacccacaccacaccacacaaccaattgcatctttccctttctaagaaattagggtttcaactttttcttccaa 3427213  T
Q  663 agtggtcgccgtccactttg 682  Q
    ||||||||| ||||||||||    
T  3427214 agtggtcgctgtccactttg 3427233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 306 - 444
Target Start/End: Original strand, 5984233 - 5984372
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||  ||||||| ||||||| |||||||||||  |||  |||| ||||| |||||||||||||||||||||||||||    
T  5984233 cccgatacttcaaaatggatgacgtactgtatcccctgcgtattctgcaccgatacatgcttgatacttcccaatacgtatctggagagtatccaaatat 5984332  T
Q  406 taaattttatttttt-aaaaaataattatccgatactttc 444  Q
    ||||||||||||||| ||||||||||||| ||||| ||||    
T  5984333 taaattttattttttaaaaaaataattattcgataatttc 5984372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 6916728 - 6916609
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||| ||    
T  6916728 cctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatctttccctttctaagaaattagggtttcaactttttcttccaa 6916629  T
Q  663 agtggtcgccgtccactttg 682  Q
    ||||||||||||||||||||    
T  6916628 agtggtcgccgtccactttg 6916609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 8132424 - 8132543
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||| ||    
T  8132424 cctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatctttccctttctaagaaattagggtttcaactttttcttccaa 8132523  T
Q  663 agtggtcgccgtccactttg 682  Q
    ||||||||||||||||||||    
T  8132524 agtggtcgccgtccactttg 8132543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 38330691 - 38330810
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||| ||    
T  38330691 cctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatctttccctttctaagaaattagggtttcaactttttcttccaa 38330790  T
Q  663 agtggtcgccgtccactttg 682  Q
    ||||||||||||||||||||    
T  38330791 agtggtcgccgtccactttg 38330810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 52895567 - 52895448
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||| ||    
T  52895567 cctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatctttccctttctaagaaattagggtttcaactttttcttccaa 52895468  T
Q  663 agtggtcgccgtccactttg 682  Q
    ||||||||||||||||||||    
T  52895467 agtggtcgccgtccactttg 52895448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 310 - 450
Target Start/End: Original strand, 29167957 - 29168098
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||  |||| |||||| |||||||| ||||||||||| || ||||||    
T  29167957 atacttcaaaatggatgacgtatcatatcccctgcgtatcctgcaccgatacctgcatgatacttcccgttacgtatcaggagagtatccgaagattaaa 29168056  T
Q  410 tttta-ttttttaaaaaataattatccgatactttccgatac 450  Q
    ||| | |||||||||||||||||||| ||||||| |||||||    
T  29168057 tttaatttttttaaaaaataattatctgatacttcccgatac 29168098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 301 - 450
Target Start/End: Original strand, 9781642 - 9781793
Alignment:
Q  301 tgaagccc-gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcc 399  Q
    |||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||| || |||||||||||| | |||||||||    
T  9781642 tgaagccctgatacttcaaaatggttgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatcagaagagtatcc 9781741  T
Q  400 aaatattaa-attttattttttaaaaaataattatccgatactttccgatac 450  Q
     || |||||  |||| ||||||  |||||||||||||||||||| |||||||    
T  9781742 gaagattaatttttttttttttttaaaataattatccgatacttcccgatac 9781793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 306 - 452
Target Start/End: Complemental strand, 48715337 - 48715190
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||   |||||||||| | |||||||||| |||||||| | |||||||| ||||||||||||||| ||||||| ||| || ||    
T  48715337 cccgatacttcaaaatggatattgtatcgtatctcctgcgtatcctacaccgataccggcccgatacttcccgatacgtatcaggagagtgtccgaagat 48715238  T
Q  406 taaattttatt-ttttaaaaaataattatccgatactttccgatacat 452  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||||||    
T  48715237 taaattttattgttttaaaaaataattatcagatacttcccgatacat 48715190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 309 - 450
Target Start/End: Original strand, 25256625 - 25256766
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    |||| ||||||||||||||||||  ||||||  ||||||| ||||||||||| ||| |||||| ||||||||||||||| ||||||||| ||||||||||    
T  25256625 gatatttcaaaatggatgacgtactgtatcctctgcgtattctgcaccgatacctgtccgatacttcccgatacgtatccggagagtattcaaatattaa 25256724  T
Q  409 attttattttttaaaaaataattatccgatactttccgatac 450  Q
    ||||||||||||  |||||||||||  |||| ||||||||||    
T  25256725 attttattttttttaaaataattataagatattttccgatac 25256766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 28659172 - 28659053
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||| ||| ||||||||| ||||||||||||||||||||| ||| ||    
T  28659172 cctttatctatctttggtgccagtacgacccacaccacaccacacaaacaattgcatctttccctttctaagaaattagggtttcaactttttcttccaa 28659073  T
Q  663 agtggtcgccgtccactttg 682  Q
    |||||  |||||||||||||    
T  28659072 agtgggtgccgtccactttg 28659053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 308 - 452
Target Start/End: Original strand, 14167092 - 14167239
Alignment:
Q  308 cgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatta 407  Q
    ||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||| | |||| |||| |||||||||| | ||||||||| || ||||    
T  14167092 cgatacttcaaaatggatgacttatcgtatcacctgcgtatcctgcaccgatatctgtctgatacttcctgatacgtatcagaagagtatccgaagatta 14167191  T
Q  408 aattttatt---ttttaaaaaataattatccgatactttccgatacat 452  Q
    |||||||||   ||||  ||||||||||| |||||||| |||||||||    
T  14167192 aattttattttattttttaaaataattattcgatacttcccgatacat 14167239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 307 - 435
Target Start/End: Complemental strand, 34432494 - 34432365
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    |||||||||||||||||||||||||| ||||||| |||||||| ||||| | |||||||| |||| |||| |||||||||| ||||||||||| || |||    
T  34432494 ccgatacttcaaaatggatgacgtattgtatcccctgcgtatcatgcactggtatctgcctgatacttcctgatacgtatcaggagagtatccgaagatt 34432395  T
Q  407 aaattttattttttaaaa-aataattatcc 435  Q
    ||||||||||||| |||| |||||||||||    
T  34432394 aaattttatttttaaaaataataattatcc 34432365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 25256867 - 25256986
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||||| |||| ||| |||||||||| ||||||||| ||| ||||||||| ||||||||||||||||||||| ||| ||    
T  25256867 cctttatctttctttggtgccagtacgacccataccacaccacacaaacaattgcatctttccctttctaagaaattagggtttcaactttttcttccaa 25256966  T
Q  663 agtggtcgccgtccactttg 682  Q
    ||| ||||||||||||||||    
T  25256967 agtagtcgccgtccactttg 25256986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 30323971 - 30324089
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||| ||| ||||| ||| |||||||||||||||| |||| ||| ||    
T  30323971 cctttatctttctttggtgccagtacggcccacaccacaccacacaaacaattgcatctttccctttataagaaattagggtttcaac-ttttcttccaa 30324069  T
Q  663 agtggtcgccgtccactttg 682  Q
    ||||||||||||||||||||    
T  30324070 agtggtcgccgtccactttg 30324089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 309 - 443
Target Start/End: Original strand, 40776004 - 40776139
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    |||||||||||||||| ||||||  ||||||| ||||||||||||||| ||||||||  |||| ||| ||||||||||| || |||||||| || |||||    
T  40776004 gatacttcaaaatggaagacgtaatgtatcccctgcgtatcctgcaccaatatctgcatgatacttctcgatacgtatcaggcgagtatccgaagattaa 40776103  T
Q  409 atttta-ttttttaaaaaataattatccgatacttt 443  Q
    |||||| |||||||||||| ||||||||||||||||    
T  40776104 attttatttttttaaaaaacaattatccgatacttt 40776139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 306 - 442
Target Start/End: Complemental strand, 3708391 - 3708254
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||||||||||  ||| |||||| |||| |||  ||||||||| ||  ||||||||||| ||||||||| | |||||    
T  3708391 cccgatacttcaaaatggatgacgtatcgtatcctctgcatatcctacaccaatacatgcccgatacttttcgatacgtatcaggagagtattcgaatat 3708292  T
Q  406 taaa-ttttattttttaaaaaataattatccgatactt 442  Q
    |||| ||||||||||||||| |||||||| ||||||||    
T  3708291 taaatttttattttttaaaatataattattcgatactt 3708254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 309 - 440
Target Start/End: Original strand, 2364686 - 2364818
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    ||||||||||||||||| ||||| | |||||| ||||||||||||| ||||| |||||| ||| || |||||||||||| | ||||||||| || |||||    
T  2364686 gatacttcaaaatggataacgtaccatatcccctgcgtatcctgcatcgatacctgcccaatactttccgatacgtatcagaagagtatccgaagattaa 2364785  T
Q  409 atttta-ttttttaaaaaataattatccgatac 440  Q
    |||||| |||||| |||||||||||||||||||    
T  2364786 attttattttttttaaaaataattatccgatac 2364818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 10822410 - 10822545
Alignment:
Q  308 cgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgca-ccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    |||||||||||||||||||||||||| ||| || ||||||||||||| |||||||||| | |||| |||||||||| | || ||||||||||| || |||    
T  10822410 cgatacttcaaaatggatgacgtatcatattccctgcgtatcctgcacccgatatctgtctgatacttcccgatacatctcaggagagtatccgaagatt 10822509  T
Q  407 aaattttatttttt--aaaaaataattatccgatac 440  Q
    ||||||||||||||  ||| ||||||||||||||||    
T  10822510 aaattttatttttttaaaataataattatccgatac 10822545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 5984438 - 5984557
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||| | ||||||||| | ||||| |||||||| |||||||||| ||||||||| ||||||||| ||| ||||||||||||||||||||| ||| ||    
T  5984438 cctttatttttctttggtgtcggtacgacccacaccacaccacacaaacaattgcatcttttcctttataagaaattagggtttcaactttttcttccaa 5984537  T
Q  663 agtggtcgccgtccactttg 682  Q
    ||||||||||||||||||||    
T  5984538 agtggtcgccgtccactttg 5984557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 306 - 440
Target Start/End: Complemental strand, 32381171 - 32381036
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||| |||||||||||  || |||||||| ||| |||| |||||| |||| || | |||| ||||| ||||||||| ||||||||||| || ||    
T  32381171 cccgatactttaaaatggatgatataccgtatcccctgcatatcatgcaccaatatttgtctgatacttcccaatacgtatcaggagagtatccgaagat 32381072  T
Q  406 taaattttatt-ttttaaaaaataattatccgatac 440  Q
    ||||||||||| ||||||||||||||||||||||||    
T  32381071 taaattttatttttttaaaaaataattatccgatac 32381036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 306 - 450
Target Start/End: Complemental strand, 41676101 - 41675956
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||| || ||||||||||||||| |||||| | |||||||| |||||||||| ||| |||||| ||||  ||| ||||  | ||||||||| || ||    
T  41676101 cccgatattttaaaatggatgacgtaccgtatctcctgcgtatcatgcaccgatacctgtccgatacttcctaatatgtattggaagagtatccgaagat 41676002  T
Q  406 taaattttatt-ttttaaaaaataattatccgatactttccgatac 450  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||||    
T  41676001 taaattttatttttttaaaaaataattatccaatacttcccgatac 41675956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 33039619 - 33039763
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||| ||||||||| || ||| ||||||||||||||||||||||||||| |||  | ||| | |||||||  ||||  |||||||||| || ||    
T  33039619 cccgatactttaaaatggataacatattgtatcccttgcgtatcctgcaccgatacctgttcaatactccccgatatatatcaagagagtatccgaaaat 33039718  T
Q  406 taaattttattttttaaaaaataattatccgatactttccgatac 450  Q
    |||||| |||||   |||||||||||||||||||||| |||||||    
T  33039719 taaattatatttaaaaaaaaataattatccgatacttcccgatac 33039763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 306 - 450
Target Start/End: Complemental strand, 34096664 - 34096520
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||| |||||||||  |||||||||||||||| |||||||||||||||||||||||| ||||| || |  ||||| ||| | ||||||||  || ||    
T  34096664 cccgatatttcaaaatgattgacgtatcgtatcccctgcgtatcctgcaccgatatctgcgcgatactttctaatacgcatcagaagagtatctgaagat 34096565  T
Q  406 taaattttattttttaaaaaataattatccgatactttccgatac 450  Q
    |||| ||| ||||||   ||||||||||||||||||| |||||||    
T  34096564 taaactttttttttttttaaataattatccgatacttcccgatac 34096520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 301 - 439
Target Start/End: Original strand, 14334172 - 14334300
Alignment:
Q  301 tgaagcccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcca 400  Q
    ||||||||||||||||||||||||||||||| ||||||            |||||||||| ||| |||||| | ||||||||||||  ||||||||||||    
T  14334172 tgaagcccgatacttcaaaatggatgacgtaccgtatct-----------tgcaccgatacctgtccgatactccccgatacgtattgggagagtatcca 14334260  T
Q  401 aatattaaattttattttttaa-aaaataattatccgata 439  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  14334261 aatattaaattttattttttaagaaaataattttccgata 14334300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 307 - 399
Target Start/End: Complemental strand, 2472965 - 2472873
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcc 399  Q
    ||||||||||||||| |||||||||||||||||| ||| |||||||||||| || ||||| |||| || |||||||||||| |||||||||||    
T  2472965 ccgatacttcaaaatagatgacgtatcgtatcccctgcatatcctgcaccggtacctgcctgatactttccgatacgtatcaggagagtatcc 2472873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 307 - 442
Target Start/End: Original strand, 10763668 - 10763797
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    ||||||||| ||||||| |||||||||||||||| |||  |||||||||| |||||||||||||||||   |||||||||| | ||||||||| || |||    
T  10763668 ccgatactttaaaatggttgacgtatcgtatcccctgc--atcctgcaccaatatctgcccgatattttttgatacgtatcagaagagtatccgaagatt 10763765  T
Q  407 aaattttattttttaaaaaataattatccgatactt 442  Q
    || |||| |||||    |||||||||||||||||||    
T  10763766 aattttttttttt----aaataattatccgatactt 10763797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 314 - 450
Target Start/End: Complemental strand, 9528943 - 9528810
Alignment:
Q  314 ttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaatttt 413  Q
    ||||||||||||||||||| |||||||||| ||||| |||||||||| |||   |||| ||||||||||||||| ||| ||||||  || |||||   ||    
T  9528943 ttcaaaatggatgacgtattgtatcccttgtgtatcttgcaccgatacctgtttgatacttcccgatacgtatcgggatagtatctgaagattaa---tt 9528847  T
Q  414 attttttaaaaaataattatccgatactttccgatac 450  Q
     |||||| ||||||||||||| ||||||| |||||||    
T  9528846 ttttttttaaaaataattatctgatacttcccgatac 9528810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 13012852 - 13012733
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||| ||||| ||||| ||||||||  |||||| || ||||| ||| ||  ||||||||||||||||||||||||||||||| ||| ||    
T  13012852 cctttatctttcttttgtgccggtacgacccacaccataccacagaaacaatttcatcttcccctttctaaaaaattagggtttcaactttttcttccaa 13012753  T
Q  663 agtggtcgccgtccactttg 682  Q
    | |||||||| |||||||||    
T  13012752 aatggtcgccttccactttg 13012733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 31653278 - 31653159
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||||| ||||||||  |||||| || ||||| ||| ||  ||||| |||||||||||| |||||||||||| ||| ||    
T  31653278 cctttatctttctttggtgccagtacgacccacaccataccacagaaacaatttcatcttcccctttttaaaaaattaggttttcaactttttcttccaa 31653179  T
Q  663 agtggtcgccgtccactttg 682  Q
    | |||||||| |||||||||    
T  31653178 aatggtcgccttccactttg 31653159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 307 - 452
Target Start/End: Complemental strand, 24590226 - 24590089
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    |||||||||||||| ||||| |||| ||||| ||||||||||||||||| |||| ||||||         |||||||||||  ||||||||   || |||    
T  24590226 ccgatacttcaaaagggatggcgtaccgtattccttgcgtatcctgcactgatacctgccc---------cgatacgtatcaagagagtatttgaagatt 24590136  T
Q  407 aaattttatttttt-aaaaaataattatccgatactttccgatacat 452  Q
    |||||||||||||| |||||||||||||| ||||||| |||||||||    
T  24590135 aaattttatttttttaaaaaataattatctgatacttcccgatacat 24590089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 301 - 452
Target Start/End: Original strand, 38218399 - 38218536
Alignment:
Q  301 tgaagcccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcca 400  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||                |||||| |||  |||||||||| | |||||||||     
T  38218399 tgaagcccgatacttcaaaatggatgacgtaccgtatcccttgcgtatc---------------tccgatacttcttgatacgtatcagaagagtatccg 38218483  T
Q  401 aatattaaatttta-ttttttaaaaaataattatccgatactttccgatacat 452  Q
    || ||||||||||| ||||||||||||||||||| |||||||| |||||||||    
T  38218484 aagattaaattttatttttttaaaaaataattattcgatacttcccgatacat 38218536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 566 - 682
Target Start/End: Original strand, 14334415 - 14334532
Alignment:
Q  566 tttatctatctttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaag 664  Q
    ||||||| ||||||||||||||||| ||||||||  |||||| || ||||| ||| ||  ||||| ||||||||||||||||||||||||| ||| |||     
T  14334415 tttatctttctttggtgccagtacgacccacaccataccacagaaacaatttcatcttcccctttttaaaaaattagggtttcaactttttcttccaaaa 14334514  T
Q  665 tggtcgccgtccactttg 682  Q
    |||| ||| |||||||||    
T  14334515 tggttgccttccactttg 14334532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 350 - 450
Target Start/End: Original strand, 24851524 - 24851625
Alignment:
Q  350 ctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaatttta-ttttttaaaaaataattatccgatactttccgat 448  Q
    ||||||||||| ||| | |||| ||||  |||| ||||  ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||    
T  24851524 ctgcaccgatacctgtctgatacttcctaatacatatcaagagagtatccaaagattaaattttatttttttaaaaaataattatccgatacttcccgat 24851623  T
Q  449 ac 450  Q
    ||    
T  24851624 ac 24851625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 37346818 - 37346699
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||| | ||||||||  ||||||||| ||||| ||| ||  ||||| ||||||||||||||||||||||||| ||  ||    
T  37346818 cctttatctttctttggtgccagtatgacccacaccataccacacaaacaatttcatcttcccctttttaaaaaattagggtttcaactttttctttcaa 37346719  T
Q  663 agtggtcgccgtccactttg 682  Q
    | |||| ||| |||||||||    
T  37346718 aatggttgccttccactttg 37346699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 309 - 439
Target Start/End: Original strand, 15417462 - 15417592
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    ||||||| ||||||||||| ||||| ||| |  ||||||| ||||| |||||| ||||||||| ||| |||||| |||| | ||||||||  |  |||||    
T  15417462 gatactttaaaatggatgatgtatcatattctctgcgtattctgcatcgatatatgcccgatacttctcgatacatatcggaagagtatcagatcattaa 15417561  T
Q  409 attttattttttaaaaaataattatccgata 439  Q
    ||||||||| ||   ||||||||||||||||    
T  15417562 attttatttatttttaaataattatccgata 15417592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 306 - 442
Target Start/End: Original strand, 29861807 - 29861940
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||| |||||||| ||||| | | |||||| |||||| | | |||||||||| || |||||||||||| | ||||||||| || ||    
T  29861807 cccgatacttcaaaatggttgacgtattgtatctcctacgtatcatgcacccacacctgcccgatactttccgatacgtatcagaagagtatccgaagat 29861906  T
Q  406 taaattttattttttaaaaaataattatccgatactt 442  Q
    |   |||  ||||||   |||||||||||||||||||    
T  29861907 t---tttattttttttttaaataattatccgatactt 29861940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 565 - 633
Target Start/End: Complemental strand, 28948810 - 28948741
Alignment:
Q  565 ctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaa 633  Q
    |||||||| ||||||||||| ||||| |||||||| |||||||||||||||||||| ||| |||||||||    
T  28948810 ctttatctttctttggtgccggtacgacccacaccacaccacacaaccaattgcatctttccctttctaa 28948741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 307 - 440
Target Start/End: Original strand, 37922274 - 37922407
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    |||||| || |||||||| ||||||  ||||| | ||| ||||||||| | ||||||||  |||| ||| ||||| || |  |||||||||| ||| |||    
T  37922274 ccgatattttaaaatggacgacgtactgtatctcatgcatatcctgcatcaatatctgcttgatacttctcgatatgtgttaggagagtatctaaagatt 37922373  T
Q  407 aaattttattttttaaaaaataattatccgatac 440  Q
    |||||||||||||||  |||||||||| ||||||    
T  37922374 aaattttattttttaggaaataattattcgatac 37922407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 309 - 417
Target Start/End: Complemental strand, 2223088 - 2222980
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    ||||||| ||||| ||||| ||| |||||  | || ||||||| |||||||| ||| | ||||||| |||||||||||| ||||||||||  || |||||    
T  2223088 gatactttaaaatagatgatgtaacgtatttcatgtgtatcctacaccgatacctgtctgatattttccgatacgtatcaggagagtatctgaagattaa 2222989  T
Q  409 attttattt 417  Q
    |||||||||    
T  2222988 attttattt 2222980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 310 - 443
Target Start/End: Complemental strand, 41028053 - 41027920
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    |||||||||||| ||||||||||| ||||   | ||||| |||||||||||  ||||| |||    |||||||||||  ||||||||||| |  ||||||    
T  41028053 atacttcaaaattgatgacgtatcatatcagatacgtattctgcaccgatacatgccc-atacgctccgatacgtattgggagagtatccgacaattaaa 41027955  T
Q  410 ttttattttttaa-aaaataattatccgatacttt 443  Q
    ||||||||||||| |||| |||| |||||||||||    
T  41027954 ttttattttttaaaaaaacaattgtccgatacttt 41027920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 344 - 443
Target Start/End: Original strand, 5368584 - 5368684
Alignment:
Q  344 cgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaattttatttttta-aaaaataattatccgatactt 442  Q
    ||||||||||| |||||| || | ||||||   | ||||||||||||||||||||| || ||| ||| |||||||||| ||||| |||| ||||||||||    
T  5368584 cgtatcctgcatcgatatatgtctgatattcttcaatacgtatctggagagtatccgaaaattgaatcttattttttataaaaacaattgtccgatactt 5368683  T
Q  443 t 443  Q
    |    
T  5368684 t 5368684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 395 - 443
Target Start/End: Original strand, 12158806 - 12158854
Alignment:
Q  395 tatccaaatattaaattttattttttaaaaaataattatccgatacttt 443  Q
    ||||| || ||||||||||||||||||||||| ||||||||||||||||    
T  12158806 tatccgaagattaaattttattttttaaaaaacaattatccgatacttt 12158854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 631
Target Start/End: Complemental strand, 20409384 - 20409316
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttct 631  Q
    ||||||||| ||||||||||||||||| |||||||| |||||||||| ||||| ||| ||| |||||||    
T  20409384 cctttatctttctttggtgccagtacgacccacaccacaccacacaatcaattacatctttccctttct 20409316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 43189899 - 43190018
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| | ||||||| ||||||| | ||||||  |||||| || ||||| ||| ||  ||||| ||||||||||||||||||||||||| ||  ||    
T  43189899 cctttatctttatttggtgtcagtacgactcacaccataccacagaaacaatttcatcttcccctttttaaaaaattagggtttcaactttttctttcaa 43189998  T
Q  663 agtggtcgccgtccactttg 682  Q
    | |||||||  |||||||||    
T  43189999 aatggtcgctttccactttg 43190018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 378 - 443
Target Start/End: Complemental strand, 9092533 - 9092466
Alignment:
Q  378 gatacgtatctggagagtatccaaatattaaattttatt--ttttaaaaaataattatccgatacttt 443  Q
    |||||||||| ||||||||||| || |||||||||||||  ||| |||||| ||||||| ||||||||    
T  9092533 gatacgtatcaggagagtatccgaagattaaattttatttatttaaaaaaacaattatctgatacttt 9092466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 443
Target Start/End: Complemental strand, 8829745 - 8829702
Alignment:
Q  401 aatattaaattttatttttt-aaaaaataattatccgatacttt 443  Q
    |||||||||||||||||||| |||||| ||||||||||||||||    
T  8829745 aatattaaattttatttttttaaaaaacaattatccgatacttt 8829702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 564 - 619
Target Start/End: Original strand, 38948992 - 38949043
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacccaccacacaaccaattgcat 619  Q
    ||||||||| ||||||||||||||||| ||||    ||||||||||||||||||||    
T  38948992 cctttatctttctttggtgccagtacgaccca----caccacacaaccaattgcat 38949043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 449
Target Start/End: Original strand, 4811974 - 4812114
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    ||||||||||||||||||| ||| |||||  ||| |||||  ||||| ||||| | ||| ||| || || || ||||||   ||||||||| || |||||    
T  4811974 gatacttcaaaatggatgatgtaccgtatttcttacgtatattgcactgatatttaccc-atactttccaattcgtatcaaaagagtatccgaaaattaa 4812072  T
Q  409 attttatttt-ttaaaaaataattatccgatactttccgata 449  Q
    ||||||||||   |||||| |||||||| ||||||| |||||    
T  4812073 attttattttaaaaaaaaacaattatccaatacttttcgata 4812114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 307 - 348
Target Start/End: Original strand, 24849371 - 24849412
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtat 348  Q
    ||||||||||||||| ||||||||| |||||||| |||||||    
T  24849371 ccgatacttcaaaatagatgacgtaccgtatcccctgcgtat 24849412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 443 - 475
Target Start/End: Complemental strand, 20409538 - 20409506
Alignment:
Q  443 tccgatacatcccgatacgcacagatacttgtg 475  Q
    |||||||||||||||||||||||||||| ||||    
T  20409538 tccgatacatcccgatacgcacagatacgtgtg 20409506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 324 - 360
Target Start/End: Original strand, 47654706 - 47654742
Alignment:
Q  324 atgacgtatcgtatcccttgcgtatcctgcaccgata 360  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  47654706 atgacgtatcgtatcccctgcgtattctgcaccgata 47654742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 6e-70; HSPs: 76)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 27353924 - 27354094
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| ||||| || ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  27353924 cccgatacttcaaaatggatgacgtaccgtattccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatat 27354023  T
Q  406 taaatttta-ttttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27354024 taaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtg 27354094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 40095653 - 40095823
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| || |||||||||||| |||||||||| ||||||    
T  40095653 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatctaaatat 40095752  T
Q  406 taaatttta-ttttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40095753 taaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtg 40095823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 48163411 - 48163581
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||| ||||||| |||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  48163411 cccgatacttcaaaatgggtgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatat 48163510  T
Q  406 taaatttta-ttttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  48163511 taaattttatttttttaaaaaataattatccgatactttccgatacatcctgatacgcacggatacttgtg 48163581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 11829692 - 11829862
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||| ||||| ||||||||| |||||||||||||||||    
T  11829692 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatatctgcctgatacttcccaatacgtatccggagagtatccaaatat 11829791  T
Q  406 taaattttattttt-taaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  11829792 taaattttatttttaaaaaaaataattatccgatactttccgatacgtcccgatacgcacggatacttgtg 11829862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 26773824 - 26773654
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  26773824 cccgatactttaaaattgatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatacttctcgatacgtatcgggagagtatccaaatat 26773725  T
Q  406 taaattttattttttaa-aaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||||| ||||||||| || |||||||||| |||||||| ||||||||||||||||||||    
T  26773724 taaattttattttttaagaaaataattttctgatactttccaatacatcctgatacgcacagatacttgtg 26773654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 34238161 - 34238331
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||||||| ||||||||||| |||||||||| || |||||||||||  |||||||||||||||||    
T  34238161 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtattctgcaccgatacctgcccgatactttccgatacgtattcggagagtatccaaatat 34238260  T
Q  406 taaattttattttt-taaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34238261 taaattttatttttaaaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtg 34238331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 301 - 475
Target Start/End: Complemental strand, 27555487 - 27555311
Alignment:
Q  301 tgaagccc-gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcc 399  Q
    |||||||| ||||||||||||||||||||||| ||||| |  ||||||| ||||||||||| ||| |||||| ||||||||||||||| |||||||||||    
T  27555487 tgaagccctgatacttcaaaatggatgacgtaccgtattctctgcgtattctgcaccgatacctgtccgatacttcccgatacgtatccggagagtatcc 27555388  T
Q  400 aaatattaaattttatt-ttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27555387 aaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtg 27555311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 306 - 456
Target Start/End: Original strand, 25969400 - 25969552
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  25969400 cccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatat 25969499  T
Q  406 taaatttta--ttttttaaaaaataattatccgatactttccgatacatcccg 456  Q
    |||||||||  ||||||| |||||||||||||||||||||||||||| |||||    
T  25969500 taaattttattttttttataaaataattatccgatactttccgatacgtcccg 25969552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 16850789 - 16850959
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||| |||||||||||||||||| ||||| || || ||||| ||||||||||  ||||||||| || |||||||||||||| |||||||||||||||    
T  16850789 cccgatatttcaaaatggatgacgtaccgtattccctgtgtatcatgcaccgatacttgcccgatactttccgatacgtatctgaagagtatccaaatat 16850888  T
Q  406 taaattttatttttt-aaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  16850889 taaattttattttttaaaaaaataattatccgatactttccgatacatcccgatacgtacggatacttgtg 16850959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 38263002 - 38263172
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| ||||| |  ||||||||||||| ||||| |||||||||| || |||||||||||| |||||||||||||||||    
T  38263002 cccgatacttcaaaatggatgacgtaccgtattctctgcgtatcctgcatcgatacctgcccgatactttccgatacgtatccggagagtatccaaatat 38263101  T
Q  406 taaatttta-ttttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||| || |||||||||| ||||||||||    
T  38263102 taaattttatttttttaaaaaataattatctgatactttccgatacgtctcgatacgcacggatacttgtg 38263172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 311 - 456
Target Start/End: Complemental strand, 9250529 - 9250381
Alignment:
Q  311 tacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaat 410  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  9250529 tacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatattaaat 9250430  T
Q  411 tttattttttaaa---aaataattatccgatactttccgatacatcccg 456  Q
    ||||||||||  |   ||||||||||||||||||||||||||| |||||    
T  9250429 tttattttttttattaaaataattatccgatactttccgatacgtcccg 9250381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 301 - 447
Target Start/End: Complemental strand, 26846013 - 26845866
Alignment:
Q  301 tgaagcccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcca 400  Q
    |||||| |||||||||||||||||||| ||| |||||| | ||||||||||||||||||| |||||| ||| |||||||||||||| |||||||||||||    
T  26846013 tgaagctcgatacttcaaaatggatgatgtaccgtatctcatgcgtatcctgcaccgatacctgcccaatacttcccgatacgtatttggagagtatcca 26845914  T
Q  401 aatattaaattttattttt-taaaaaataattatccgatactttccga 447  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||    
T  26845913 aatattaaattttatttttaaaaaaaataattatccgatactttccga 26845866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 309 - 450
Target Start/End: Complemental strand, 34122726 - 34122584
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  34122726 gatacttcaaaatggatgacgtaccgtatcctctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagtatccaaatattaa 34122627  T
Q  409 attttatt-ttttaaaaaataattatccgatactttccgatac 450  Q
    |||||||| |||| |||||||||||||| |||| | |||||||    
T  34122626 attttattttttttaaaaataattatccaatacatcccgatac 34122584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 306 - 440
Target Start/End: Complemental strand, 1043183 - 1043048
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||| |||| || |||||||||||| |||||||||||||||||    
T  1043183 cccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcatcgatacctgcctgatactttccgatacgtatcgggagagtatccaaatat 1043084  T
Q  406 taaattttattttttaa-aaaataattatccgatac 440  Q
    ||||||||||||||||| ||||||||| ||||||||    
T  1043083 taaattttattttttaagaaaataattttccgatac 1043048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 47238719 - 47238559
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||| |||||||||||| |||||||  |||||||||| |||||||||||          |||||||||||||||||||||||    
T  47238719 cccgatacttcaaaatggatgatgtatcgtatcccctgcgtatattgcaccgatacctgcccgatat----------gtatctggagagtatccaaatat 47238630  T
Q  406 taaattttatt-ttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||| ||||||||||||||||||||| ||||||| |||| ||||||||||||  ||||||||||    
T  47238629 taaattttatttttttaaaaaataattatccgacactttccaatacgtcccgatacgcaaggatacttgtg 47238559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 40095911 - 40096030
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||| ||    
T  40095911 cctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatctttccctttctaagaaattagggtttcaactttttcttccaa 40096010  T
Q  663 agtggtcgccgtccactttg 682  Q
    ||||||||||||||||||||    
T  40096011 agtggtcgccgtccactttg 40096030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 42897005 - 42897139
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||            ||||||||||||||| |||||||||||||||||    
T  42897005 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatac-----------ttcccgatacgtatccggagagtatccaaatat 42897093  T
Q  406 taaatttta-ttttttaaaaaataattatccgatactttccgatac 450  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  42897094 taaattttatttttttaaaaaataattatccgatactttccgatac 42897139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 307 - 452
Target Start/End: Complemental strand, 44960246 - 44960100
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| || | ||| | |||| ||||||||| ||||| | |||||||||||| |||    
T  44960246 ccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcactgacacctgtctgatacttcccgatatgtatcagaagagtatccaaagatt 44960147  T
Q  407 aaattttatttttt-aaaaaataattatccgatactttccgatacat 452  Q
    ||||||||||||||  ||||||||||||| ||||||| |||||||||    
T  44960146 aaattttattttttgtaaaaataattatcggatacttcccgatacat 44960100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 306 - 450
Target Start/End: Complemental strand, 36202890 - 36202755
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||  ||||||||||          |||||| |||||||||||||||||    
T  36202890 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatgcctgcccgata----------cgtatccggagagtatccaaatat 36202801  T
Q  406 taaattttatt-ttttaaaaaataattatccgatactttccgatac 450  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||    
T  36202800 taaattttatttttttaaaaaataattatctgatactttccgatac 36202755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 306 - 438
Target Start/End: Original strand, 19510526 - 19510659
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||  ||||||||| |||| |||| ||||| || ||||||||||||||    
T  19510526 cccgatacttcaaaatggatgacgtatcgtatcccctgtgtatcatgcactgatacatgcccgatacttcctgatatgtatcgggtgagtatccaaatat 19510625  T
Q  406 taaattttattttttaa-aaaataattatccgat 438  Q
    ||||||||||||||||| ||||||||| ||||||    
T  19510626 taaattttattttttaagaaaataattttccgat 19510659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 566 - 682
Target Start/End: Original strand, 39521026 - 39521143
Alignment:
Q  566 tttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaag 664  Q
    ||||||| |||||||||| |||||| |||||||| |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||| ||||    
T  39521026 tttatctttctttggtgctagtacgacccacaccacaccacacaaccaattgcatctttccctttctaagaaattagggtttcaactttttcttccaaag 39521125  T
Q  665 tggtcgccgtccactttg 682  Q
    ||||||||||||||||||    
T  39521126 tggtcgccgtccactttg 39521143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 310 - 442
Target Start/End: Original strand, 21409398 - 21409530
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    |||||| |||||||||||||||||||||| | ||  |||||||||| |||| ||||| ||||  |||||||||||||| |||||||||||||| ||||||    
T  21409398 atacttaaaaatggatgacgtatcgtatctcctgtatatcctgcactgatacctgcctgatacatcccgatacgtatcaggagagtatccaaagattaaa 21409497  T
Q  410 ttttattttttaaaaaataattatccgatactt 442  Q
    ||||||||||| ||||||||||||| |||||||    
T  21409498 ttttatttttttaaaaataattatcggatactt 21409530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 301 - 440
Target Start/End: Complemental strand, 27398165 - 27398024
Alignment:
Q  301 tgaagcccg-atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcc 399  Q
    ||||||||| |||||| |||||||||||||||  ||||||| |||||||||||||| |||| |||| ||||| || || ||| ||||| |||||||||||    
T  27398165 tgaagcccggatactttaaaatggatgacgtactgtatcccctgcgtatcctgcactgatacctgctcgatactttccaatatgtatccggagagtatcc 27398066  T
Q  400 aaatattaaattttattttt-taaaaaataattatccgatac 440  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  27398065 aaatattaaattttatttttaaaaaaaataattatccgatac 27398024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 306 - 442
Target Start/End: Original strand, 33454073 - 33454210
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| || | |||| ||| ||||||||||| ||| ||||||| || ||    
T  33454073 cccgatatttcaaaatggatgacgtatcgtatcccctgcgtatcctgcactgatatatgtcagatacttctcgatacgtatcaggaaagtatccgaagat 33454172  T
Q  406 taaattttatttttt-aaaaaataattatccgatactt 442  Q
    ||||||||||||||| |||||||||||| | |||||||    
T  33454173 taaattttattttttaaaaaaataattagctgatactt 33454210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 39520803 - 39520937
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||            ||||||||||||||| |||||||||||||||||    
T  39520803 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatac-----------ttcccgatacgtatccggagagtatccaaatat 39520891  T
Q  406 taaatttta-ttttttaaaaaataattatccgatactttccgatac 450  Q
    ||||||||| |||||| ||||||||||||||||||| | |||||||    
T  39520892 taaattttattttttttaaaaataattatccgatacatcccgatac 39520937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 307 - 452
Target Start/End: Original strand, 35159869 - 35160015
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    ||||||||||||||||||||| |||||||||||| ||| ||| |||||||||||  || |  ||| ||||||||||||||| ||||||||||| || |||    
T  35159869 ccgatacttcaaaatggatgatgtatcgtatcccctgcatattctgcaccgatacttgtctaatacttcccgatacgtatcaggagagtatccgaagatt 35159968  T
Q  407 aaattttatttt-ttaaaaaataattatccgatactttccgatacat 452  Q
    ||||||||||||   |||||||||||||| |||| || |||||||||    
T  35159969 aaattttattttaaaaaaaaataattatctgatagttcccgatacat 35160015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 11829954 - 11830068
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacccaccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaa 663  Q
    ||||||||| |||||||||||||||||  |||    |||||||||| ||||||||| ||| ||||||||| ||||||||||||||||||||| ||| |||    
T  11829954 cctttatctttctttggtgccagtacgatcca----caccacacaaacaattgcatctttccctttctaagaaattagggtttcaactttttcttccaaa 11830049  T
Q  664 gtggtcgccgtccactttg 682  Q
    |||||||||||||||||||    
T  11830050 gtggtcgccgtccactttg 11830068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 564 - 681
Target Start/End: Original strand, 36660722 - 36660838
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacccaccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaa 663  Q
    ||||||||| ||||||||||||||| | |||||||| ||  ||||| ||||||||| ||| ||||||||| ||||||||||||||||||||| ||| |||    
T  36660722 cctttatctttctttggtgccagtatgacccacacc-acaccacaaacaattgcatctttccctttctaagaaattagggtttcaactttttcttccaaa 36660820  T
Q  664 gtggtcgccgtccacttt 681  Q
    ||||||||||||||||||    
T  36660821 gtggtcgccgtccacttt 36660838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 311 - 446
Target Start/End: Original strand, 11058360 - 11058494
Alignment:
Q  311 tacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaat 410  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||| | |||| || | |||||||||  ||||||||||  | ||||||||    
T  11058360 tacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatatctgtctgatactttcagatacgtattgggagagtatcagattattaaat 11058459  T
Q  411 tttattttttaaaaaataattatccgatactttccg 446  Q
    |||| |||  ||||||||| |||| |||||||||||    
T  11058460 ttta-tttaaaaaaaataagtatctgatactttccg 11058494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 375 - 472
Target Start/End: Complemental strand, 16564422 - 16564325
Alignment:
Q  375 cccgatacgtatctggagagtatccaaatattaaattttattttttaa-aaaataattatccgatactttccgatacatcccgatacgcacagatactt 472  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |  ||||||||||||||| ||||||||||||| |||||||    
T  16564422 cccgatacgtatcgggagagtatccaaatattaaattttattttttaataaaataatt-tatgatactttccgatacgtcccgatacgcacggatactt 16564325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 375 - 472
Target Start/End: Original strand, 16601240 - 16601337
Alignment:
Q  375 cccgatacgtatctggagagtatccaaatattaaattttattttttaa-aaaataattatccgatactttccgatacatcccgatacgcacagatactt 472  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |  ||||||||||||||| ||||||||||||| |||||||    
T  16601240 cccgatacgtatcgggagagtatccaaatattaaattttattttttaataaaataatt-tatgatactttccgatacgtcccgatacgcacggatactt 16601337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 344 - 440
Target Start/End: Original strand, 8028738 - 8028835
Alignment:
Q  344 cgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaattttat-tttttaaaaaataattatccgatac 440  Q
    ||||||||||||||||| | |||||||| |||| |||||||||| ||||||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  8028738 cgtatcctgcaccgataccggcccgatacttcctgatacgtatcgggagagtatccaaatattaaattttatattttaaaaaaataattttccgatac 8028835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 314 - 450
Target Start/End: Complemental strand, 23970230 - 23970093
Alignment:
Q  314 ttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaatttt 413  Q
    |||| ||||||||||||||  |||||| |||||||| |||| ||||||||| | |||| |||| |||||||||  | ||||||||  || ||||||||||    
T  23970230 ttcataatggatgacgtattatatcccctgcgtatcatgcatcgatatctgtctgatacttcctgatacgtattagaagagtatctgaagattaaatttt 23970131  T
Q  414 atttt-ttaaaaaataattatccgatactttccgatac 450  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  23970130 attttcttaaaaaataattacccgatactttccgatac 23970093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 4291515 - 4291649
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||| ||||||||||| ||| |||||||| ||||||||||||||||||| ||| |||||| ||||||||||           ||||||||||||    
T  4291515 cccgatactttaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgtccgatacttcccgatac-----------gtatccaaatat 4291603  T
Q  406 taaattttattttttaa-aaaataattatccgatactttccgatac 450  Q
    ||||||||||||||||| ||||||||| |||||||| | |||||||    
T  4291604 taaattttattttttaagaaaataattttccgatacgtcccgatac 4291649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 314 - 443
Target Start/End: Complemental strand, 18114043 - 18113913
Alignment:
Q  314 ttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaatttt 413  Q
    |||||||||||||||||| | |||||  |  |||||||||||||||||||||| |||| |||| |||| ||||| ||||||||||  || ||||||||||    
T  18114043 ttcaaaatggatgacgtaccatatcctctatgtatcctgcaccgatatctgcctgatacttcctgatatgtatcaggagagtatctgaagattaaatttt 18113944  T
Q  414 attttt-taaaaaataattatccgatacttt 443  Q
    ||||||  ||||||||| |||||||||||||    
T  18113943 atttttaaaaaaaataagtatccgatacttt 18113913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 306 - 399
Target Start/End: Complemental strand, 23079152 - 23079059
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcc 399  Q
    ||||||||||||||||||||||| || |||||||| ||||||||||| | ||||| || ||||||| ||||||||||||||| |||||||||||    
T  23079152 cccgatacttcaaaatggatgacataccgtatcccctgcgtatcctggatcgatacctacccgatacttcccgatacgtatcaggagagtatcc 23079059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 19510767 - 19510886
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||||| ||||||||  |||||| || ||||| ||| ||  ||||||||||||||||||||||||||||||| ||| ||    
T  19510767 cctttatctttctttggtgccagtacgacccacaccataccacagaaacaatttcatcttcccctttctaaaaaattagggtttcaactttttcttccaa 19510866  T
Q  663 agtggtcgccgtccactttg 682  Q
    | |||| ||| |||||||||    
T  19510867 aatggttgccttccactttg 19510886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 376 - 451
Target Start/End: Original strand, 36660551 - 36660626
Alignment:
Q  376 ccgatacgtatctggagagtatccaaatattaaattttattttttaaaaaataattatccgatactttccgataca 451  Q
    ||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  36660551 ccgatacgtatccagagagtattcaaatattaaattttattttttaaaaaataattatccgatacgtcccgataca 36660626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 309 - 442
Target Start/End: Original strand, 24956257 - 24956391
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    ||||||||||||| |||||||||||||||||| | | |||| ||||  ||||  |||| |||| || ||||||||||||  |||||||||| || |||||    
T  24956257 gatacttcaaaattgatgacgtatcgtatcccctacatatcatgcattgatacatgcctgatactttccgatacgtatcaagagagtatccgaagattaa 24956356  T
Q  409 attttatttttta-aaaaataattatccgatactt 442  Q
    ||||||||||  | |||||||||||||||||||||    
T  24956357 attttattttaaagaaaaataattatccgatactt 24956391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 309 - 450
Target Start/End: Original strand, 40041385 - 40041526
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    |||| |||||||| ||||| |||||||||| | | ||||||||| || ||||  || | |||| |||  |||||||||| ||||||||||| || |||||    
T  40041385 gatatttcaaaatagatgatgtatcgtatctcctacgtatcctgtactgatacatgtctgatacttcttgatacgtatcaggagagtatccgaagattaa 40041484  T
Q  409 attttattttttaaaaaataattatccgatactttccgatac 450  Q
    ||||||||||  ||||||||||||||||||| || |||||||    
T  40041485 attttattttaaaaaaaataattatccgatatttcccgatac 40041526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 44269729 - 44269873
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||| ||||||||||||  ||||||| ||| ||||||||| | ||||||| | |||| ||  ||||||||||| | ||||||||  || ||    
T  44269729 cccgatacttcaagatggatgacgtacggtatcccgtgcatatcctgca-ctatatctgtctgatacttttcgatacgtatcagtagagtatctgaagat 44269827  T
Q  406 taaatttt-attttttaaaaaataattatccgatactttccgatac 450  Q
    |||||||| |||||| |||||||||||| ||||||||| |||||||    
T  44269828 taaattttaatttttaaaaaaataattaaccgatacttcccgatac 44269873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 306 - 418
Target Start/End: Original strand, 38064598 - 38064710
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||| |||||||||||| || |||||| | |||||||| ||||| |||| ||| |||||| || |||||||||||| ||||||||||| || ||    
T  38064598 cccgatactttaaaatggatgacataacgtatctcatgcgtatcatgcactgatacctgaccgatactttccgatacgtatcaggagagtatccgaagat 38064697  T
Q  406 taaattttatttt 418  Q
    |||||| ||||||    
T  38064698 taaattatatttt 38064710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 373 - 440
Target Start/End: Complemental strand, 47720217 - 47720149
Alignment:
Q  373 ttcccgatacgtatctggagagtatccaaatattaaattttatt-ttttaaaaaataattatccgatac 440  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  47720217 ttcccgatacgtatccggagagtatccgaatattaaattttatttttttaaaaaataattatccgatac 47720149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 310 - 443
Target Start/End: Complemental strand, 8056438 - 8056305
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    |||||||||||||||||||||| ||||||| ||||||||| || |||||| ||||     || || |||||||||||| ||||||||||  || ||||||    
T  8056438 atacttcaaaatggatgacgtaccgtatcctttgcgtatcttgtaccgatgtctgg----tactttccgatacgtatcaggagagtatctgaagattaaa 8056343  T
Q  410 ttttattttttaa----aaaataattatccgatacttt 443  Q
    |||||||||||||    || ||||||||||||||||||    
T  8056342 ttttattttttaatttcaagataattatccgatacttt 8056305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 317 - 420
Target Start/End: Original strand, 23311736 - 23311839
Alignment:
Q  317 aaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaattttatt 416  Q
    ||||| ||||| ||| |||||||| || ||||||||||||||||| || | |||| ||||||||| ||||| ||||||||||| || |||||||||||||    
T  23311736 aaaatagatgatgtaccgtatcccatgtgtatcctgcaccgatatatgtctgatacttcccgatatgtatcaggagagtatccgaagattaaattttatt 23311835  T
Q  417 tttt 420  Q
    ||||    
T  23311836 tttt 23311839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 306 - 449
Target Start/End: Complemental strand, 554992 - 554858
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||  ||||| |||||||||||||||||| || |||||||||||||||| ||          ||| |||||||||| ||||||||| | || ||    
T  554992 cccgatactctaaaatagatgacgtatcgtatcccctgtgtatcctgcaccgatacct----------tcctgatacgtatcaggagagtattcgaagat 554903  T
Q  406 taaattttatt-ttttaaaaaataattatccgatactttccgata 449  Q
    ||||||||||| |||| ||||||||||||||||||||| ||||||    
T  554902 taaattttattttttttaaaaataattatccgatacttcccgata 554858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 566 - 682
Target Start/End: Original strand, 8028953 - 8029070
Alignment:
Q  566 tttatctatctttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaag 664  Q
    ||||||| ||||||||| ||||||| ||||||||  || ||| || ||||| ||| ||  ||||||||||||||||||||||||||||||| ||| |||     
T  8028953 tttatctttctttggtgtcagtacgacccacaccatacgacagaaacaatttcatcttcccctttctaaaaaattagggtttcaactttttcttccaaaa 8029052  T
Q  665 tggtcgccgtccactttg 682  Q
    |||||||| |||||||||    
T  8029053 tggtcgccttccactttg 8029070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 564 - 672
Target Start/End: Complemental strand, 26773560 - 26773452
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||||| |||||||| ||||||| || ||||| ||| ||  |||||||||||| |||||||||||||||||| ||| ||    
T  26773560 cctttatctttctttggtgccagtacgacccacaccacaccacagaaacaatttcatcttcccctttctaaaaa-ttagggtttcaactttttcttccaa 26773462  T
Q  663 agtggtcgcc 672  Q
    | ||||||||    
T  26773461 aatggtcgcc 26773452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 309 - 443
Target Start/End: Complemental strand, 1363121 - 1362985
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    ||||||||||||||||||| | |   |||||| || ||||| ||||| ||||  |||  |||| ||| ||||||||||| ||||||||||| ||||| ||    
T  1363121 gatacttcaaaatggatgatgaacattatcccctgtgtatcttgcactgatacatgcttgatacttctcgatacgtatcaggagagtatccgaatatgaa 1363022  T
Q  409 attttatttttt--aaaaaataattatccgatacttt 443  Q
    ||||||||||||  |||||| |||||| |||||||||    
T  1363021 attttatttttttaaaaaaacaattatgcgatacttt 1362985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 309 - 443
Target Start/End: Complemental strand, 49015175 - 49015044
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    |||||||||||||||||||| || |||||| | || ||||| | |||||||| ||| | || ||   |||||||||||| | |||||||||||  |||||    
T  49015175 gatacttcaaaatggatgacataccgtatctcatgtgtatcatacaccgatacctgtctga-at---ccgatacgtatcagaagagtatccaacgattaa 49015080  T
Q  409 attttatt-ttttaaaaaataattatccgatacttt 443  Q
    |||||||| |||| ||||| ||||||||||||||||    
T  49015079 attttattttttttaaaaacaattatccgatacttt 49015044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 16564216 - 16564098
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||| | | ||||||  |||||| || ||||| ||| ||  ||||| ||||||||||||||||||||||||| ||  ||    
T  16564216 cctttatctttctttggtgccagtaagactcacaccataccacaaaaacaatttcatcttccccttt-taaaaaattagggtttcaactttttctttcaa 16564118  T
Q  663 agtggtcgccgtccactttg 682  Q
    | |||||||| |||||||||    
T  16564117 aatggtcgccttccactttg 16564098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 306 - 353
Target Start/End: Complemental strand, 16564470 - 16564423
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgc 353  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||    
T  16564470 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgc 16564423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 306 - 353
Target Start/End: Original strand, 16601192 - 16601239
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgc 353  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||    
T  16601192 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgc 16601239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 16601446 - 16601564
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||| | | ||||||  |||||| || ||||| ||| ||  ||||| ||||||||||||||||||||||||| ||  ||    
T  16601446 cctttatctttctttggtgccagtaagactcacaccataccacaaaaacaatttcatcttccccttt-taaaaaattagggtttcaactttttctttcaa 16601544  T
Q  663 agtggtcgccgtccactttg 682  Q
    | |||||||| |||||||||    
T  16601545 aatggtcgccttccactttg 16601564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 309 - 387
Target Start/End: Original strand, 48153620 - 48153698
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatc 387  Q
    ||||||| ||||||||||| |||||||||||  | ||||| ||||||||||| |||| | |||||| ||||||||||||    
T  48153620 gatactttaaaatggatgatgtatcgtatcctctccgtattctgcaccgatacctgctcaatattttccgatacgtatc 48153698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 625 - 682
Target Start/End: Complemental strand, 1042982 - 1042925
Alignment:
Q  625 cctttctaaaaaattagggtttcaactttttattctaaagtggtcgccgtccactttg 682  Q
    ||||||||||||||||||||||||||||||| ||| ||| || ||||| |||||||||    
T  1042982 cctttctaaaaaattagggtttcaactttttcttccaaaatgatcgccttccactttg 1042925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 378 - 450
Target Start/End: Original strand, 21179911 - 21179984
Alignment:
Q  378 gatacgtatctggagagtatccaaatattaaattttattttttaaaa-aataattatccgatactttccgatac 450  Q
    |||| ||||| ||||||||||| || |||||||||||||||  |||| |||||||||||||||||| |||||||    
T  21179911 gatatgtatcaggagagtatccgaagattaaattttattttaaaaaataataattatccgatacttcccgatac 21179984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 346 - 426
Target Start/End: Complemental strand, 2908311 - 2908231
Alignment:
Q  346 tatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaattttattttttaaaaaa 426  Q
    |||| |||| ||||||||||| ||||   |||||||||||||||||||||| || |  ||||| |||||||||||||||||    
T  2908311 tatcatgcagcgatatctgcctgatacaccccgatacgtatctggagagtacccgacaattaagttttattttttaaaaaa 2908231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 631
Target Start/End: Complemental strand, 26843845 - 26843777
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttct 631  Q
    ||||||||| ||||||||||| ||||| |||||||| |||||||||| ||||||||| ||| |||||||    
T  26843845 cctttatctttctttggtgcccgtacgacccacaccacaccacacaatcaattgcatctttccctttct 26843777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 391 - 449
Target Start/End: Complemental strand, 19820960 - 19820901
Alignment:
Q  391 agagtatccaaatattaaattttattttttaaaaaa-taattatccgatactttccgata 449  Q
    |||||||| ||| |||||||||||||||  |||||| |||||||||||||||||||||||    
T  19820960 agagtatctaaagattaaattttattttaaaaaaaaataattatccgatactttccgata 19820901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 310 - 417
Target Start/End: Original strand, 30403903 - 30404010
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    |||||||||||| ||||| ||||||||||   | |||||| || ||||||| |||  |||||| | |||||||||||| ||||| ||| |||  ||||||    
T  30403903 atacttcaaaattgatgatgtatcgtatcagatacgtatcatgtaccgatacctgttcgatatgttccgatacgtatcaggagaatattcaataattaaa 30404002  T
Q  410 ttttattt 417  Q
    ||||||||    
T  30404003 ttttattt 30404010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 565 - 631
Target Start/End: Original strand, 34238409 - 34238476
Alignment:
Q  565 ctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttct 631  Q
    |||||||| ||||||||||| ||||| |||||||| |||||| ||||||||||||| ||| |||||||    
T  34238409 ctttatctttctttggtgcccgtacgacccacaccacaccacgcaaccaattgcatctttccctttct 34238476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 35136065 - 35136127
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgata 371  Q
    ||||||||||||||| ||||||| |||||  | || ||||| |||||||||||||||||||||    
T  35136065 gatacttcaaaatgggtgacgtaccgtatttcctgggtatcttgcaccgatatctgcccgata 35136127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 310 - 360
Target Start/End: Complemental strand, 36758104 - 36758054
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgata 360  Q
    ||||||||||||| |||| |||||||||||| ||||||| |||||||||||    
T  36758104 atacttcaaaatgaatgatgtatcgtatcccctgcgtattctgcaccgata 36758054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 310 - 360
Target Start/End: Complemental strand, 36767628 - 36767578
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgata 360  Q
    ||||||||||||| |||| |||||||||||| ||||||| |||||||||||    
T  36767628 atacttcaaaatgaatgatgtatcgtatcccctgcgtattctgcaccgata 36767578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 564 - 655
Target Start/End: Original strand, 4291809 - 4291901
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaacttttt 655  Q
    ||||||||| ||||||||||||||||| ||||||||  |||| | || ||||| ||| ||  ||||| ||||| | |||||||||||||||||    
T  4291809 cctttatctttctttggtgccagtacgacccacaccataccatagaaacaatttcatcttcccctttttaaaatactagggtttcaacttttt 4291901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 376 - 424
Target Start/End: Original strand, 38064738 - 38064786
Alignment:
Q  376 ccgatacgtatctggagagtatccaaatattaaattttattttttaaaa 424  Q
    ||||||||||||  |||||||||| || |||||||||||||||||||||    
T  38064738 ccgatacgtatcaagagagtatccgaagattaaattttattttttaaaa 38064786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 346 - 450
Target Start/End: Complemental strand, 1400347 - 1400235
Alignment:
Q  346 tatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaatttta--------ttttttaaaaaataattatccga 437  Q
    ||||||||||||||| |||| ||||| |||| |||||||||| | || |||||  ||||||||||| ||        |||||| ||||||||||||| ||    
T  1400347 tatcctgcaccgatacctgctcgatacttccggatacgtatcagaagcgtatctgaatattaaattgtaaattttattttttttaaaaataattatctga 1400248  T
Q  438 tactttccgatac 450  Q
    ||||| |||||||    
T  1400247 tacttcccgatac 1400235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 443
Target Start/End: Original strand, 7416689 - 7416755
Alignment:
Q  378 gatacgtatctggagagtatccaaatattaaattttatttt-ttaaaaaataattatccgatacttt 443  Q
    |||||||||| ||||||||||| || ||||||||||||||| ||  |||| ||||||| ||||||||    
T  7416689 gatacgtatcaggagagtatccgaagattaaattttattttattttaaaacaattatctgatacttt 7416755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 377 - 450
Target Start/End: Original strand, 26973127 - 26973201
Alignment:
Q  377 cgatacgtatctggagagtatccaaatattaaattttattttttaaa-aaataattatccgatactttccgatac 450  Q
    ||||||||||| | ||||||||| || |||||||||| ||||||    ||||||||||||||||||| |||||||    
T  26973127 cgatacgtatcagaagagtatccgaagattaaatttttttttttttttaaataattatccgatacttcccgatac 26973201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 379 - 443
Target Start/End: Original strand, 31189375 - 31189442
Alignment:
Q  379 atacgtatctggagagtatccaaatattaaattttatt---ttttaaaaaataattatccgatacttt 443  Q
    ||||||||| | |||||||||||| |||||||| ||||   |||| ||||||||||||||| ||||||    
T  31189375 atacgtatcggaagagtatccaaagattaaattatattttatttttaaaaataattatccgctacttt 31189442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 399
Target Start/End: Original strand, 40041510 - 40041543
Alignment:
Q  366 ccgatatttcccgatacgtatctggagagtatcc 399  Q
    |||||||||||||||||||||| |||||||||||    
T  40041510 ccgatatttcccgatacgtatcaggagagtatcc 40041543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 307 - 339
Target Start/End: Original strand, 21179861 - 21179893
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcc 339  Q
    ||||||||||||||||||||| |||||||||||    
T  21179861 ccgatacttcaaaatggatgatgtatcgtatcc 21179893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 439 - 475
Target Start/End: Complemental strand, 26843971 - 26843935
Alignment:
Q  439 actttccgatacatcccgatacgcacagatacttgtg 475  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  26843971 actttccgatacatcccgatccgcacggatacttgtg 26843935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 564 - 607
Target Start/End: Complemental strand, 27397908 - 27397864
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacac 607  Q
    ||||||||| ||||||||||||||||| |||||||| ||||||||    
T  27397908 cctttatctttctttggtgccagtacgacccacaccacaccacac 27397864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 443 - 475
Target Start/End: Original strand, 39520920 - 39520952
Alignment:
Q  443 tccgatacatcccgatacgcacagatacttgtg 475  Q
    |||||||||||||||||||||| ||||||||||    
T  39520920 tccgatacatcccgatacgcacggatacttgtg 39520952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 6e-70; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 37996923 - 37996753
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||| ||||||||||||||| |||||||| ||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||    
T  37996923 cccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgagacctgcccgatatttcccgatacgtatccggagagtatccaaatat 37996824  T
Q  406 taaattttatt-ttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37996823 taaattttatttttttaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtg 37996753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 40497336 - 40497506
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||  ||||||||| ||||||||||||||| |||||||||||||||||    
T  40497336 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacttgcccgatacttcccgatacgtatccggagagtatccaaatat 40497435  T
Q  406 taaattttattttt-taaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40497436 taaattttatttttaaaaaaaataattatccgatactttccgatacatcccgatacgcacggatacttgtg 40497506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 301 - 475
Target Start/End: Complemental strand, 25937181 - 25937006
Alignment:
Q  301 tgaagcccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcca 400  Q
    ||||||||||||||| |||||||||||||||||||||| | |||||||||| |||| |||  ||||||||| || ||||||||||||||||||||||| |    
T  25937181 tgaagcccgatactttaaaatggatgacgtatcgtatctcctgcgtatcctacaccaatacatgcccgatactttccgatacgtatctggagagtatcta 25937082  T
Q  401 aatattaaattttattttttaaaaaa-taattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  25937081 aatattaaattttatttttaaaaaaattaattatccgatactttctgatacatcccgatacgcacggatacttgtg 25937006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 52505944 - 52505775
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||| ||||||||||| |||  |||||||| |||||||||||||||||| | |||||||||||||||||||||||| | |||||||||||||||    
T  52505944 cccgatacttaaaaatggatgatgtactgtatccct-gcgtatcctgcaccgataccggcccgatatttcccgatacgtatccgaagagtatccaaatat 52505846  T
Q  406 taaattttattttt-taaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||  ||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  52505845 taaattttatttttcaaaaaaataattatccgatacttttcgatacatcccgatacacacggatacttgtg 52505775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 7327718 - 7327863
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| ||| |||||||||||||    
T  7327718 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggatagtatccaaatat 7327817  T
Q  406 taaatttta-ttttttaaaaaataattatccgatactttccgatac 450  Q
    ||||||||| |||||||||||||||||||||||||| | |||||||    
T  7327818 taaattttatttttttaaaaaataattatccgatacatcccgatac 7327863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 35389756 - 35389901
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  35389756 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggagagtatccaaatat 35389855  T
Q  406 taaattttattttttaa-aaaataattatccgatactttccgatac 450  Q
    ||||||||||||||||| ||||||||| |||||||| | |||||||    
T  35389856 taaattttattttttaagaaaataattttccgatacatcccgatac 35389901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 307 - 450
Target Start/End: Complemental strand, 28882789 - 28882645
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    ||||||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||| || |||||||||||| ||||||||||||||||||    
T  28882789 ccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcatgcaccgatatatgcccgatactttccgatacgtatcgggagagtatccaaatatt 28882690  T
Q  407 aaattttattttttaa-aaaataattatccgatactttccgatac 450  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||    
T  28882689 aaattttattttttaagaaaataattttccgatactttccgatac 28882645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 306 - 440
Target Start/End: Original strand, 48122831 - 48122966
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||| |||||||||||||||  |||||||||||||||||||||||||  ||||||||||||||||    
T  48122831 cccgatacttcaaaatggatgacgtaccgtatcccctgcatatcctgcaccgatacatgcccgatatttcccgatacgtatccagagagtatccaaatat 48122930  T
Q  406 taaatttta-ttttttaaaaaataattatccgatac 440  Q
    ||||||||| ||||||||||||||||||||||||||    
T  48122931 taaattttatttttttaaaaaataattatccgatac 48122966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 306 - 474
Target Start/End: Complemental strand, 22611486 - 22611327
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| ||||||||||          |||||| |||||||||||||||||    
T  22611486 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtttcctgcaccgatacctgcccgata----------cgtatccggagagtatccaaatat 22611397  T
Q  406 taaattttattttttaaaaaa-taattatccgatactttccgatacatcccgatacgcacagatacttgt 474  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||    
T  22611396 taaattttattttttaaaaaaataattatccgatactttccgatacgtcccgatacgcacggatacttgt 22611327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 28704733 - 28704903
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||| ||||||||||||||| |||||||| ||| |||||||||| |||| ||  |||||| || || ||| ||||| |||||||||| ||||||    
T  28704733 cccgatactttaaaatggatgacgtaccgtatcccctgcatatcctgcactgatacctatccgatactttccaatatgtatccggagagtatcaaaatat 28704832  T
Q  406 taaatttta-ttttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  28704833 taaattttatttttttaaaaaataattatccgatactttctgatacatcccgatacgcacggatacttgtg 28704903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 306 - 475
Target Start/End: Original strand, 22310711 - 22310881
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||| ||||||||||||| |||||||| || |||||||||||||||| ||||| |||| |||||||||||||||   |||||||| ||||||    
T  22310711 cccgatacttcacaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacctgcctgatacttcccgatacgtatcgatagagtatcaaaatat 22310810  T
Q  406 taaattttattttttaa-aaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||||| ||||||||| |||||||||||| ||||| ||| |||||| || ||||||||||    
T  22310811 taaattttattttttaagaaaataattttccgatactttctgatacgtcctgatacgtacggatacttgtg 22310881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 306 - 451
Target Start/End: Original strand, 52121186 - 52121332
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||  ||| ||| |||||| ||| ||||||||||| |||||||||||||||||    
T  52121186 cccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcactaatacctgtccgatacttctcgatacgtatcgggagagtatccaaatat 52121285  T
Q  406 taaattttatttttt-aaaaaataattatccgatactttccgataca 451  Q
    ||||||||||||||| ||||||||||| | |||||||||| ||||||    
T  52121286 taaattttattttttaaaaaaataatttttcgatactttctgataca 52121332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 306 - 450
Target Start/End: Complemental strand, 1679810 - 1679665
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||| ||||| |||||||  ||| ||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  1679810 cccgatacttcaaaatggataacgtaccgtatccactgcatatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatat 1679711  T
Q  406 taaattttattttt-taaaaaataattatccgatactttccgatac 450  Q
    ||||||||||||||  |||||||||||||||||||| | |||||||    
T  1679710 taaattttatttttaaaaaaaataattatccgatacatcccgatac 1679665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 306 - 440
Target Start/End: Complemental strand, 42465019 - 42464884
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||  ||||||  ||||||||||||||||||| |||||||||| ||||||||||||||| | |||||||||||||||    
T  42465019 cccgatacttcaaaatggatgacgtactgtatcctctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagtatccaaatat 42464920  T
Q  406 taaattttatt-ttttaaaaaataattatccgatac 440  Q
    ||| ||||||| ||||||||||||||||||||||||    
T  42464919 taatttttattgttttaaaaaataattatccgatac 42464884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 301 - 475
Target Start/End: Complemental strand, 10225269 - 10225104
Alignment:
Q  301 tgaagccc-gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcc 399  Q
    |||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||            || |||||||||||| |||||||||||    
T  10225269 tgaagccctgatactttaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatac-----------tttccgatacgtatccggagagtatcc 10225181  T
Q  400 aaatattaaattttattttttaa-aaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||| ||||||||||    
T  10225180 aaatattaaattttattttttaaaaaaataattatccgatacttttcgatacataccgatacgcacggatacttgtg 10225104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 307 - 475
Target Start/End: Original strand, 1528509 - 1528667
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    ||||||||||||||||||||||||||| |||||| |||||||| |||| ||||| |||||||          ||||||||| ||||||||||||||||||    
T  1528509 ccgatacttcaaaatggatgacgtatcatatcccctgcgtatcatgcatcgatacctgcccg----------atacgtatccggagagtatccaaatatt 1528598  T
Q  407 aaattttattttttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||| ||||||||||||||||||| ||||||||| ||| |||||||||| ||||||||||    
T  1528599 aaattttatttttaaaaaaataattatccgatattttccgatatatctcgatacgcacggatacttgtg 1528667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 28968516 - 28968661
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| | ||||| || ||||||||||||||||| |||||||||| ||||||||||||||| | ||||||||| || ||    
T  28968516 cccgatacttcaaaatggatgacgtaccatatcctttacgtatcctgcaccgatacctgcccgatacttcccgatacgtatcagaagagtatccgaagat 28968615  T
Q  406 taaattttattttt-taaaaaataattatccgatactttccgatac 450  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||    
T  28968616 taaattttatttttaaaaaaaataattatccgatacttcccgatac 28968661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 306 - 450
Target Start/End: Complemental strand, 13748559 - 13748415
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||| |||||||||||||||  ||||||||||||||||||| |||||||||| || |||||||||||| | ||||||||| || ||    
T  13748559 cccgatacttcaaaatggttgacgtatcgtatcctctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatcagaagagtatccgaagat 13748460  T
Q  406 taaattttattttttaaaaaataattatccgatactttccgatac 450  Q
    |||||||||||||||  |||||||||||| ||||||| |||||||    
T  13748459 taaattttattttttttaaaataattatctgatacttcccgatac 13748415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 307 - 450
Target Start/End: Original strand, 52684208 - 52684352
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    ||||||||||||||| |||||||||||||||| | ||||||||||||||||||| ||| |||||| || |||||||||||  ||||||||||| ||||||    
T  52684208 ccgatacttcaaaatagatgacgtatcgtatctcatgcgtatcctgcaccgatacctgtccgatactttccgatacgtattaggagagtatccgaatatt 52684307  T
Q  407 aaattttattttt-taaaaaataattatccgatactttccgatac 450  Q
    |||||||||||||  ||||||||||||||||||| ||||||||||    
T  52684308 aaattttatttttaaaaaaaataattatccgatattttccgatac 52684352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 306 - 450
Target Start/End: Complemental strand, 55269124 - 55268983
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    || |||| ||||||||||||||| ||||||||||| || ||    
T  55269124 cccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcatcgata----cctgatacttcccgatacgtatcaggagagtatccgaagat 55269029  T
Q  406 taaatttta-ttttttaaaaaataattatccgatactttccgatac 450  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||    
T  55269028 taaattttatttttttaaaaaataattatccgatacttcccgatac 55268983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 301 - 449
Target Start/End: Complemental strand, 6134500 - 6134350
Alignment:
Q  301 tgaagccc-gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcc 399  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||  | || |||| ||||||||| ||||| |||||||||||    
T  6134500 tgaagccctgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacatacctgatacttcccgatatgtatcaggagagtatcc 6134401  T
Q  400 aaatattaaattttattttttaa-aaaataattatccgatactttccgata 449  Q
     || ||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  6134400 gaagattaaatattattttttaaaaaaataattatccgatacttcccgata 6134350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 308 - 444
Target Start/End: Complemental strand, 22289831 - 22289694
Alignment:
Q  308 cgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatta 407  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||  |||| |||| |||||||||| ||||||||||| || ||||    
T  22289831 cgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccaatacctgcatgatacttcctgatacgtatcaggagagtatccgaagatta 22289732  T
Q  408 aattttattt-tttaaaaaataattatccgatactttc 444  Q
    |||||||||| ||||||||||||| ||| |||||||||    
T  22289731 aattttatttctttaaaaaataatcatctgatactttc 22289694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 307 - 450
Target Start/End: Complemental strand, 41742183 - 41742039
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    |||||||||||||||||||||||||| ||||||  || |||||||||||||||| || || |||| |||||||||| |||||||||||||||| || |||    
T  41742183 ccgatacttcaaaatggatgacgtattgtatcctctgtgtatcctgcaccgataccttcctgatacttcccgatacatatctggagagtatccgaagatt 41742084  T
Q  407 aaattttattttt-taaaaaataattatccgatactttccgatac 450  Q
    |||||||||||||  |||||||||||||||| ||||| |||||||    
T  41742083 aaattttatttttaaaaaaaataattatccggtacttcccgatac 41742039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 306 - 457
Target Start/End: Complemental strand, 2567499 - 2567358
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||||||||  | |||||||||||||||||||            |||||||||||||||  |||||||||| |||||    
T  2567499 cccgatacttcaaaatggatgacgtatcgtatttcctgcgtatcctgcaccgatac-----------ttcccgatacgtatccagagagtatccgaatat 2567411  T
Q  406 taaattttattttttaa-aaaataattatccgatactttccgatacatcccga 457  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2567410 taaattttattttttaaaaaaataattatccgatactttccgatacatcccga 2567358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 308 - 450
Target Start/End: Complemental strand, 7899829 - 7899685
Alignment:
Q  308 cgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatta 407  Q
    |||||||||||||||||||||| |  ||||| ||| ||||||||||||| ||||||||  |||||||||||||||||||| | ||||||||| || ||||    
T  7899829 cgatacttcaaaatggatgacgaaatgtatctcttacgtatcctgcacctatatctgcttgatatttcccgatacgtatcagaagagtatccgaagatta 7899730  T
Q  408 aattttatttttt--aaaaaataattatccgatactttccgatac 450  Q
    |||||||||||||   ||||||||||||||||||||| |||||||    
T  7899729 aattttatttttttacaaaaataattatccgatacttcccgatac 7899685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 310 - 443
Target Start/End: Original strand, 30226430 - 30226563
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||||||||| |||||||||| || | ||||||||||  |||||||||| || ||||||    
T  30226430 atacttcaaaatggatgacttatcgtatcctctgcgtatcctgcaccgatacctgcccgatactttctgatacgtatcaagagagtatccgaagattaaa 30226529  T
Q  410 ttttattttttaaaaaataattatccgatacttt 443  Q
    ||||||||||||||||  ||||||| ||||||||    
T  30226530 ttttattttttaaaaaccaattatctgatacttt 30226563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 28704991 - 28705110
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||||| |||||||| || ||||||||||||||||| ||| | ||||||| ||||||||||||||||||||| ||| ||    
T  28704991 cctttatctttctttggtgccagtacgacccacaccacatcacacaaccaattgcatctttccttttctaagaaattagggtttcaactttttcttccaa 28705090  T
Q  663 agtggtcgccgtccactttg 682  Q
    ||||||||||||||||||||    
T  28705091 agtggtcgccgtccactttg 28705110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 310 - 440
Target Start/End: Original strand, 42229684 - 42229815
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    |||||||||||| ||||||||||  |||||| ||||||||||||||||||| |||||||||| |||| |||||||||| | ||||||||| || ||||||    
T  42229684 atacttcaaaatagatgacgtattatatcccctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatcagaagagtatccgaaaattaaa 42229783  T
Q  410 ttttattttt-taaaaaataattatccgatac 440  Q
    ||||||||||  ||||||||||||||||||||    
T  42229784 ttttatttttaaaaaaaataattatccgatac 42229815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 52505687 - 52505568
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||| |||| |||| ||||||||||||||||||||| ||| ||    
T  52505687 cctttatctttctttggtgccagtacgacccacaccacaccacacaaccaattgcatctttcccttactaagaaattagggtttcaactttttcttccaa 52505588  T
Q  663 agtggtcgccgtccactttg 682  Q
    ||||||| ||||||||||||    
T  52505587 agtggtcaccgtccactttg 52505568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 566 - 682
Target Start/End: Complemental strand, 10225013 - 10224896
Alignment:
Q  566 tttatctatctttggtgccagtacggcccacaccca-ccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaag 664  Q
    ||||||| | ||||||||||||||| |||||||| | |||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||| ||||    
T  10225013 tttatctttatttggtgccagtacgacccacaccaaaccacacaaccaattgcatctttccctttctaagaaattagggtttcaactttttcttccaaag 10224914  T
Q  665 tggtcgccgtccactttg 682  Q
    ||||||||||||||||||    
T  10224913 tggtcgccgtccactttg 10224896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 566 - 682
Target Start/End: Complemental strand, 42464795 - 42464678
Alignment:
Q  566 tttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaag 664  Q
    ||||||| ||||||||||||||||| |||||||| ||||||||||||||||| || ||| ||||||||| ||||||||||||||||||||| |||  |||    
T  42464795 tttatctttctttggtgccagtacgacccacaccacaccacacaaccaattggatctttccctttctaagaaattagggtttcaactttttcttcctaag 42464696  T
Q  665 tggtcgccgtccactttg 682  Q
    ||||||||||||||||||    
T  42464695 tggtcgccgtccactttg 42464678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 1679562 - 1679443
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||||| |||||||| |||||| ||||||||||||| ||| ||||||||| ||||||||||| ||||||||| ||| ||    
T  1679562 cctttatctttctttggtgccagtacgacccacaccacaccacccaaccaattgcatctttccctttctaagaaattagggttccaactttttcttccaa 1679463  T
Q  663 agtggtcgccgtccactttg 682  Q
    |||| |||||||||||||||    
T  1679462 agtgatcgccgtccactttg 1679443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 48123078 - 48123198
Alignment:
Q  564 cctttatctatctttggtgcc-agtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattcta 661  Q
    ||||||||| ||||||||||  |||||| ||||||||  ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||| |    
T  48123078 cctttatctttctttggtgcttagtacgacccacaccataccacacaaccaattgcatctttccctttctaagaaattagggtttcaactttttcttcca 48123177  T
Q  662 aagtggtcgccgtccactttg 682  Q
    |||||||||||||||||||||    
T  48123178 aagtggtcgccgtccactttg 48123198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 306 - 440
Target Start/End: Original strand, 53192504 - 53192629
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| ||||| || || |||||||||||||||| |||||||          ||||||||| |||||||||||||||||    
T  53192504 cccgatacttcaaaatggatgacgtaccgtataccctgagtatcctgcaccgatacctgcccg----------atacgtatccggagagtatccaaatat 53192593  T
Q  406 taaatttta-ttttttaaaaaataattatccgatac 440  Q
    ||||||||| ||||||||||||||||||||||||||    
T  53192594 taaattttatttttttaaaaaataattatccgatac 53192629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 301 - 442
Target Start/End: Complemental strand, 21157847 - 21157704
Alignment:
Q  301 tgaagccc-gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcc 399  Q
    |||||||| ||||||||||||||||||||||||||||| |  || | ||||||||  |||| |||||||||| || | |||||||| | |||||||||||    
T  21157847 tgaagcccagatacttcaaaatggatgacgtatcgtattctctgtgcatcctgcattgataactgcccgatactttctgatacgtaccaggagagtatcc 21157748  T
Q  400 aaatattaaattttatt-ttttaaaaaataattatccgatactt 442  Q
     || ||||||||||||| ||||||||||||||||||||||||||    
T  21157747 gaagattaaattttatttttttaaaaaataattatccgatactt 21157704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 308 - 439
Target Start/End: Original strand, 983202 - 983335
Alignment:
Q  308 cgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatta 407  Q
    ||||| ||||||||||||||||||||||||||| || ||||  ||||| |||||||| | |||| ||||||||||||||| |||||||||||||| ||||    
T  983202 cgataattcaaaatggatgacgtatcgtatcccctgtgtattttgcactgatatctgtctgatacttcccgatacgtatcaggagagtatccaaagatta 983301  T
Q  408 aattttattt--tttaaaaaataattatccgata 439  Q
    ||||||||||     |||||||||||||||||||    
T  983302 aattttatttaaaaaaaaaaataattatccgata 983335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 307 - 442
Target Start/End: Original strand, 45347306 - 45347441
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    ||||||||||||||||| |||| ||||||||||| ||| |||||||||| |||| |||||||||| ||  ||||||||||| | ||||||||| || |||    
T  45347306 ccgatacttcaaaatggttgac-tatcgtatcccctgc-tatcctgcactgatacctgcccgatacttttcgatacgtatccgaagagtatccgaagatt 45347403  T
Q  407 aaatttta--ttttttaaaaaataattatccgatactt 442  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  45347404 aaattttattttttttaaaaaataattatccgatactt 45347441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 342 - 440
Target Start/End: Original strand, 33239992 - 33240091
Alignment:
Q  342 tgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaattttattttttaa-aaaataattatccgatac 440  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||  |||||||    
T  33239992 tgcgtatcctgcatcgatacctgcccgatacttcccgatacgtatcgggagagtatccaaatattatattttattttttaagaaaataatttaccgatac 33240091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 342 - 440
Target Start/End: Complemental strand, 45533056 - 45532957
Alignment:
Q  342 tgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaattttattttt-taaaaaataattatccgatac 440  Q
    |||| |||||||| ||||| |||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  45533056 tgcgaatcctgcatcgatacctgcccgatacttcccgatacgtatccgaagagtatccaaatattaaattttatttttaaaaaaaataattatccgatac 45532957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 310 - 450
Target Start/End: Complemental strand, 19879201 - 19879070
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||          ||||  ||||||||||| || ||| ||    
T  19879201 atacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatat----------gtataaggagagtatccgaagattcaa 19879112  T
Q  410 ttttatttttt-aaaaaataattatccgatactttccgatac 450  Q
    ||||||||||| |||||||||||||||||||||| |||||||    
T  19879111 ttttattttttaaaaaaataattatccgatacttcccgatac 19879070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 306 - 452
Target Start/End: Complemental strand, 30787674 - 30787526
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||| || ||||  ||   || | ||| ||||||||||| ||||||||||| || ||    
T  30787674 cccgatacttcaaaatcgatgacgtatcgtatcccctgcgtatcctgtactgatacttgtttgacacttctcgatacgtatcaggagagtatccgaagat 30787575  T
Q  406 taaattttattttttaaaa--aataattatccgatactttccgatacat 452  Q
    |||||||||||||  ||||  ||||||||||| |||||| |||||||||    
T  30787574 taaattttattttaaaaaaataataattatcctatacttcccgatacat 30787526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 349 - 450
Target Start/End: Original strand, 19421465 - 19421567
Alignment:
Q  349 cctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaatttta-ttttttaaaaaataattatccgatactttccga 447  Q
    |||||||||||| ||| | |||| ||||||||||||||| ||||||||||| || ||||||||||| ||||||||||| |||||||||||||||| ||||    
T  19421465 cctgcaccgatacctgtctgatacttcccgatacgtatcaggagagtatccgaagattaaattttatttttttaaaaagtaattatccgatacttcccga 19421564  T
Q  448 tac 450  Q
    |||    
T  19421565 tac 19421567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 319 - 450
Target Start/End: Original strand, 25700779 - 25700912
Alignment:
Q  319 aatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaattttattt- 417  Q
    |||||||||  ||| ||||||  ||||||||||||||||||| ||||| |||| ||||  ||||||||| ||||||||||| || ||||||||||||||     
T  25700779 aatggatgatatattgtatcctctgcgtatcctgcaccgatacctgcctgatacttcctaatacgtatcaggagagtatccgaagattaaattttatttt 25700878  T
Q  418 -tttaaaaaataattatccgatactttccgatac 450  Q
     |||  |||||||||||||||||||| |||||||    
T  25700879 atttttaaaataattatccgatacttcccgatac 25700912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 306 - 418
Target Start/End: Original strand, 2122710 - 2122825
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatccctt---gcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaa 402  Q
    ||||||||||||||||||||||||||| ||||||| |   ||||||| ||||||||||  |||| |||| ||||||||||||||| |||||| |||| ||    
T  2122710 cccgatacttcaaaatggatgacgtattgtatcccctcctgcgtatcatgcaccgatacttgcctgatacttcccgatacgtatcaggagagaatccgaa 2122809  T
Q  403 tattaaattttatttt 418  Q
     |||||||||||||||    
T  2122810 gattaaattttatttt 2122825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 318 - 443
Target Start/End: Original strand, 3983715 - 3983842
Alignment:
Q  318 aaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaattttattt 417  Q
    ||||||||||||||  ||||||   | ||||||||||||||||  || | |||| ||||||||||||||| ||||||||||| || ||||||||||||||    
T  3983715 aaatggatgacgtactgtatcctccgtgtatcctgcaccgatacttgtctgatacttcccgatacgtatcaggagagtatccgaagattaaattttattt 3983814  T
Q  418 ttt--aaaaaataattatccgatacttt 443  Q
    |||  |||||| ||||||||||||||||    
T  3983815 ttttaaaaaaagaattatccgatacttt 3983842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 306 - 398
Target Start/End: Original strand, 29915867 - 29915959
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatc 398  Q
    |||||||||||||||| |||||||||||||||||| |||||||| |||||||||| ||| | |||| ||||||||||||||| ||| ||||||    
T  29915867 cccgatacttcaaaatagatgacgtatcgtatcccctgcgtatcatgcaccgatacctgtctgatacttcccgatacgtatcaggatagtatc 29915959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 306 - 398
Target Start/End: Original strand, 29965020 - 29965112
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatc 398  Q
    |||||||||||||||| |||||||||||||||||| |||||||| |||||||||| ||| | |||| ||||||||||||||| ||| ||||||    
T  29965020 cccgatacttcaaaatagatgacgtatcgtatcccctgcgtatcatgcaccgatacctgtctgatacttcccgatacgtatcaggatagtatc 29965112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 309 - 450
Target Start/End: Complemental strand, 20510265 - 20510123
Alignment:
Q  309 gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaa 408  Q
    ||||||||||||||||||||| |||||||||| |||||||| || ||||||| |||   |||| || || |||||||||  |||| ||||  || |||||    
T  20510265 gatacttcaaaatggatgacgcatcgtatcccgtgcgtatcttgtaccgatacctgtttgatactttccaatacgtatcaagagaatatctgaagattaa 20510166  T
Q  409 attttattttt-taaaaaataattatccgatactttccgatac 450  Q
    |||||||||||  |||||||||||||| ||||||| |||||||    
T  20510165 attttatttttaaaaaaaataattatctgatacttcccgatac 20510123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 564 - 669
Target Start/End: Complemental strand, 25936924 - 25936818
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    |||||||| ||||||||||| |||||| |||||| | ||||||| || ||||||||| ||| ||||||||| ||||||||||||||||||||||||  ||    
T  25936924 cctttatccatctttggtgctagtacgacccacatcacaccacataaacaattgcatctttccctttctaagaaattagggtttcaactttttatttcaa 25936825  T
Q  663 agtggtc 669  Q
    |||||||    
T  25936824 agtggtc 25936818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 566 - 682
Target Start/End: Complemental strand, 28882540 - 28882423
Alignment:
Q  566 tttatctatctttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaag 664  Q
    ||||||| ||||||||||||||||| |||||||   |||||| || ||||| ||| ||  ||||| ||||||||||||||||||||||||| ||| ||||    
T  28882540 tttatctttctttggtgccagtacgacccacactataccacaaaaacaatttcatcttcccctttttaaaaaattagggtttcaactttttcttccaaag 28882441  T
Q  665 tggtcgccgtccactttg 682  Q
    |||||||| |||||||||    
T  28882440 tggtcgccttccactttg 28882423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 397
Target Start/End: Complemental strand, 38889197 - 38889101
Alignment:
Q  301 tgaagccc-gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtat 397  Q
    |||||||| |||||||||||||||||||||||||||||||  | || |||||||||||||||||||| |||| || |||||||||||| |||||||||    
T  38889197 tgaagccctgatacttcaaaatggatgacgtatcgtatcctctacg-atcctgcaccgatatctgcctgataatttccgatacgtatcaggagagtat 38889101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 308 - 450
Target Start/End: Original strand, 47642025 - 47642157
Alignment:
Q  308 cgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatta 407  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||           |||||| ||||| ||||||||| | ||||||||| || ||||    
T  47642025 cgatacttcaaaatggatgacgtaccgtatcccatgcgtatcctgca-----------ccgatacttcccaatacgtatcagaagagtatccgaagatta 47642113  T
Q  408 aattttatttt-ttaaaaaataattatccgatactttccgatac 450  Q
    ||||||||||| | |||||||||||||| ||||||| |||||||    
T  47642114 aattttattttataaaaaaataattatctgatacttcccgatac 47642157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 310 - 443
Target Start/End: Original strand, 5271489 - 5271612
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    |||||||||||| |||||| ||  ||||||||||||||||||| ||||||| ||          |||||||||||||| |||||||||||  | ||||||    
T  5271489 atacttcaaaatagatgacatactgtatcccttgcgtatcctgaaccgatacct----------tcccgatacgtatcaggagagtatccggagattaaa 5271578  T
Q  410 ttttattttttaaaaaataattatccgatacttt 443  Q
    ||||||||||| ||||| ||||||||||||||||    
T  5271579 ttttatttttttaaaaaaaattatccgatacttt 5271612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 311 - 450
Target Start/End: Complemental strand, 47750997 - 47750856
Alignment:
Q  311 tacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatct--ggagagtatccaaatattaa 408  Q
    |||||||||||||||||||||   |||||  ||||||||||||||||||| |||| ||||| ||  | |||||||| |  | |||||||| ||  |||||    
T  47750997 tacttcaaaatggatgacgtactatatcctctgcgtatcctgcaccgatagctgctcgatacttttcaatacgtatattagaagagtatcaaatcattaa 47750898  T
Q  409 attttattttttaaaaaataattatccgatactttccgatac 450  Q
    ||||||| |||| ||||||||||||| ||||||| |||||||    
T  47750897 attttatatttttaaaaataattatctgatacttcccgatac 47750856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 308 - 371
Target Start/End: Complemental strand, 13353296 - 13353233
Alignment:
Q  308 cgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgata 371  Q
    |||||||| |||||||||||||||||||||| | |||||||||||| |||||||||||||||||    
T  13353296 cgatactttaaaatggatgacgtatcgtatctcctgcgtatcctgcgccgatatctgcccgata 13353233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 22310985 - 22311104
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||||| ||||||||  |||||| || ||||| ||| ||  ||||  ||||||||||||||||||||||||| ||  ||    
T  22310985 cctttatctttctttggtgccagtacgacccacaccataccacagaaacaatttcatcttccccttgttaaaaaattagggtttcaactttttctttcaa 22311084  T
Q  663 agtggtcgccgtccactttg 682  Q
    | |||||||| |||||||||    
T  22311085 aatggtcgccttccactttg 22311104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 35390005 - 35390124
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| |||||||||| ||||||  |||||||  |||||| || ||||| ||| ||  || || ||||||||||||||||||||||||| ||||||    
T  35390005 cctttatctttctttggtgcgagtacgatccacaccataccacagaaacaatttcatcttccccattttaaaaaattagggtttcaacttttttttctaa 35390104  T
Q  663 agtggtcgccgtccactttg 682  Q
    | |||||||| |||||||||    
T  35390105 aatggtcgccttccactttg 35390124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 306 - 356
Target Start/End: Original strand, 19420911 - 19420961
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcacc 356  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19420911 cccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcacc 19420961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 310 - 360
Target Start/End: Original strand, 49419245 - 49419295
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgata 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  49419245 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcatcgata 49419295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 50287208 - 50287090
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| |||||||||| |||||| ||||||||  |||||| || ||||| ||| ||| ||||| ||||||||||| ||||||||||||| ||| ||    
T  50287208 cctttatctttctttggtgc-agtacgacccacaccataccacaaaaacaatttcatctttccctttttaaaaaattagagtttcaactttttcttccaa 50287110  T
Q  663 agtggtcgccgtccactttg 682  Q
    | ||||||||  ||||||||    
T  50287109 aatggtcgcctgccactttg 50287090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 52121418 - 52121536
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacccaccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaa 663  Q
    ||||||||| |||||||| | |||||| || ||| |  ||| | || ||||| ||| ||  ||||||||||||||||||||||||||||||| ||| |||    
T  52121418 cctttatctttctttggttctagtacgaccaacatcatccatagaaacaatttcatcttcccctttctaaaaaattagggtttcaactttttcttccaaa 52121517  T
Q  664 gtggtcgccgtccactttg 682  Q
     |||||||| |||||||||    
T  52121518 atggtcgccttccactttg 52121536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 310 - 450
Target Start/End: Original strand, 39663968 - 39664107
Alignment:
Q  310 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaa 409  Q
    |||||||||||||| ||| ||||  ||| |  ||||||||||||||||||| ||| |||||| || |||||||||||| | | ||||| | || |||||     
T  39663968 atacttcaaaatggttgatgtattctattctctgcgtatcctgcaccgatacctgtccgatactttccgatacgtatcagaatagtattcgaagattaat 39664067  T
Q  410 ttttattttttaaaaaataattatccgatactttccgatac 450  Q
    |||||||||||    |||||||||| ||||||| |||||||    
T  39664068 ttttatttttt-tttaataattatctgatacttcccgatac 39664107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 564 - 631
Target Start/End: Original strand, 53192743 - 53192811
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttct 631  Q
    ||||||||| ||||||||||| ||||| |||||||| |||||||||||||||||||| ||| |||||||    
T  53192743 cctttatctttctttggtgcccgtacgacccacaccacaccacacaaccaattgcatctttccctttct 53192811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 339 - 397
Target Start/End: Complemental strand, 45057311 - 45057253
Alignment:
Q  339 ccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtat 397  Q
    ||||||||||||||||||||||  ||||||||| |||||||||||||||  ||||||||    
T  45057311 ccttgcgtatcctgcaccgatacttgcccgatacttcccgatacgtatcatgagagtat 45057253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 339 - 443
Target Start/End: Original strand, 15768966 - 15769071
Alignment:
Q  339 ccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatattaaattttatttttt-aaaaaataattatccga 437  Q
    ||||| ||||||||||||||||  ||| ||||| ||  |||||||||||   ||||||||| || ||||||||  ||||||| |||||| ||||||||||    
T  15768966 ccttgtgtatcctgcaccgatacatgcgcgatacttttcgatacgtatcacaagagtatccgaaaattaaattaaattttttaaaaaaacaattatccga 15769065  T
Q  438 tacttt 443  Q
    ||||||    
T  15769066 tacttt 15769071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 19349701 - 19349637
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgata 371  Q
    ||||||||||||||||| |||||||||||||| | || ||| ||||||| |||| ||||||||||    
T  19349701 ccgatacttcaaaatggttgacgtatcgtatctcctgtgtaacctgcactgatacctgcccgata 19349637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 306 - 369
Target Start/End: Complemental strand, 21006597 - 21006534
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccga 369  Q
    ||||||||||||||||| |||||||||| |||| | |||||||| |||| ||||| ||||||||    
T  21006597 cccgatacttcaaaatgaatgacgtatcatatctcatgcgtatcttgcatcgatacctgcccga 21006534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 347 - 402
Target Start/End: Complemental strand, 13331001 - 13330944
Alignment:
Q  347 atcctgcaccgatatctgcccgatat--ttcccgatacgtatctggagagtatccaaa 402  Q
    |||||||||||||| |||||||||||  |||| |||||||||| | ||||||||||||    
T  13331001 atcctgcaccgatacctgcccgatatacttcctgatacgtatcagaagagtatccaaa 13330944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 377 - 442
Target Start/End: Complemental strand, 25322513 - 25322447
Alignment:
Q  377 cgatacgtatctggagagtatccaaatattaaattttatttt-ttaaaaaataattatccgatactt 442  Q
    ||||||||||| | |||||||| ||  ||||||||||||||| ||  ||||||||||||||||||||    
T  25322513 cgatacgtatcggaagagtatcaaaccattaaattttattttattttaaaataattatccgatactt 25322447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 441 - 475
Target Start/End: Original strand, 35389882 - 35389916
Alignment:
Q  441 tttccgatacatcccgatacgcacagatacttgtg 475  Q
    |||||||||||||||||||||||| ||||||||||    
T  35389882 tttccgatacatcccgatacgcacggatacttgtg 35389916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 443 - 475
Target Start/End: Complemental strand, 1679682 - 1679650
Alignment:
Q  443 tccgatacatcccgatacgcacagatacttgtg 475  Q
    |||||||||||||||||||||| ||||||||||    
T  1679682 tccgatacatcccgatacgcacggatacttgtg 1679650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 443 - 475
Target Start/End: Original strand, 7327846 - 7327878
Alignment:
Q  443 tccgatacatcccgatacgcacagatacttgtg 475  Q
    |||||||||||||||||||||| ||||||||||    
T  7327846 tccgatacatcccgatacgcacggatacttgtg 7327878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640 (Bit Score: 119; Significance: 2e-60; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 8204 - 8034
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  8204 cccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatat 8105  T
Q  406 taaattttattttt-taaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||| || |||||||||| ||||||||||    
T  8104 taaattttatttttaaaaaaaataattatctgatactttccgatacgtctcgatacgcacggatacttgtg 8034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 110; Significance: 5e-55; HSPs: 2)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 5518 - 5663
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||| |||||| |||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  5518 cccgatacttcaaaatggacgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggagagtatccaaatat 5617  T
Q  406 taaattttattttttaa-aaaataattatccgatactttccgatac 450  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  5618 taaattttattttttaagaaaataattttccgatactttccgatac 5663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 564 - 682
Target Start/End: Original strand, 5786 - 5905
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacaccc-accacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| ||||||||||||||| | ||||||||  |||||| || ||||| ||| ||  ||||| |||||||| |||||||||||||||| ||  ||    
T  5786 cctttatctttctttggtgccagtatgacccacaccataccacataaacaatttcatcttcccctttttaaaaaatgagggtttcaactttttctttcaa 5885  T
Q  663 agtggtcgccgtccactttg 682  Q
    | |||| ||| |||||||||    
T  5886 aatggttgccttccactttg 5905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 107; Significance: 3e-53; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 306 - 475
Target Start/End: Complemental strand, 30556 - 30386
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||| ||||| |||||  | |||||||||| |||||||| |||||||||| |||| |||||||||| |||||||||||||||||    
T  30556 cccgatacttcaaaatggataacgtaccgtatttcctgcgtatcctacaccgatacctgcccgatacttcctgatacgtatccggagagtatccaaatat 30457  T
Q  406 taaattttatttt-ttaaaaaataattatccgatactttccgatacatcccgatacgcacagatacttgtg 475  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  30456 taaattttattttaaaaaaaaataattatccgatactttccgatacatcccgatacgctcggatacttgtg 30386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 566 - 682
Target Start/End: Complemental strand, 30299 - 30182
Alignment:
Q  566 tttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaag 664  Q
    ||||||| ||||||||||||||| | |||||||| |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||  ||||    
T  30299 tttatctttctttggtgccagtatgacccacaccacaccacacaaccaattgcatctttccctttctaagaaattagggtttcaactttttctttcaaag 30200  T
Q  665 tggtcgccgtccactttg 682  Q
    ||||||||||||||||||    
T  30199 tggtcgccgtccactttg 30182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 307 - 438
Target Start/End: Original strand, 13257 - 13388
Alignment:
Q  307 ccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatatt 406  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||| | |||| |||||||||||||||  |||||||||  || |||    
T  13257 ccgatacttcaaaatggatgacgtatcgtatctcctgcgtatcctgcaccgatacctgtcagatacttcccgatacgtatcaagagagtatctgaagatt 13356  T
Q  407 aaattttattttttaaaaaataattatccgat 438  Q
    |||||||||||||| |||||||||||||||||    
T  13357 aaattttatttttttaaaaataattatccgat 13388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 306 - 450
Target Start/End: Complemental strand, 42177 - 42043
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    ||||||||||||||||||||||||||  ||||||| |||||||||||||||||||            |||||||||||||||| ||||||||||||||||    
T  42177 cccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatac-----------ttcccgatacgtatctagagagtatccaaatat 42089  T
Q  406 taaattttattttttaa-aaaataattatccgatactttccgatac 450  Q
    ||||||||||||||||| |||||||||||||||||| |||| ||||    
T  42088 taaattttattttttaaaaaaataattatccgatacgttcccatac 42043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 566 - 683
Target Start/End: Complemental strand, 41939 - 41821
Alignment:
Q  566 tttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaaag 664  Q
    ||||||| ||||||||| ||||||| |||| ||| |||||||||| ||||||||| |||  |||||||| ||||||||||||||||||||| ||| ||||    
T  41939 tttatctttctttggtgtcagtacgacccataccacaccacacaaacaattgcatctttcgctttctaagaaattagggtttcaactttttcttccaaag 41840  T
Q  665 tggtcgccgtccactttgt 683  Q
    |||||| ||||||||||||    
T  41839 tggtcgtcgtccactttgt 41821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 306 - 439
Target Start/End: Complemental strand, 27893 - 27769
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||||| |||||||| ||| ||||||||||||||| ||| ||||||          |||||| | |||||||||||||||    
T  27893 cccgatacttcaaaatggatgacgtaccgtatcccctgcatatcctgcaccgatacctgtccgata----------cgtatccgcagagtatccaaatat 27804  T
Q  406 taaattttatt-ttttaaaaaataattatccgata 439  Q
    ||||||||||| |||||||||||||||||||||||    
T  27803 taaattttatttttttaaaaaataattatccgata 27769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 566 - 682
Target Start/End: Complemental strand, 27646 - 27524
Alignment:
Q  566 tttatctatctttggtgccagtacggcccacacc------caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattc 659  Q
    ||||||| ||||||||||||||||| ||||||||      ||||| |||| ||||||||| ||| ||||||||| |||||| |||||||||||||| |||    
T  27646 tttatctttctttggtgccagtacgacccacaccacaccacaccatacaaacaattgcatctttccctttctaagaaattaaggtttcaactttttcttc 27547  T
Q  660 taaagtggtcgccgtccactttg 682  Q
     ||||||||||||||||||||||    
T  27546 caaagtggtcgccgtccactttg 27524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 64; Significance: 1e-27; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 564 - 682
Target Start/End: Complemental strand, 44470 - 44351
Alignment:
Q  564 cctttatctatctttggtgccagtacggcccacacc-caccacacaaccaattgcatgttttcctttctaaaaaattagggtttcaactttttattctaa 662  Q
    ||||||||| |||||||||| |||||| |||||||| |||||||||||||||||||| ||| ||||  ||| ||||||||||||||||||||| ||| ||    
T  44470 cctttatctttctttggtgctagtacgacccacaccacaccacacaaccaattgcatctttcccttattaagaaattagggtttcaactttttcttccaa 44371  T
Q  663 agtggtcgccgtccactttg 682  Q
    |||||||  |||||||||||    
T  44370 agtggtcatcgtccactttg 44351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 376 - 451
Target Start/End: Complemental strand, 44653 - 44577
Alignment:
Q  376 ccgatacgtatctggagagtatccaaatattaaattttatt-ttttaaaaaataattatccgatactttccgataca 451  Q
    |||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||| | ||||||||    
T  44653 ccgatacgtatccggagagtatccaaatattaaatttttttcttttaaaaaataattatccgatacatcccgataca 44577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 306 - 360
Target Start/End: Complemental strand, 44702 - 44648
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgata 360  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  44702 cccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgata 44648  T

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Target: scaffold0177 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 306 - 440
Target Start/End: Complemental strand, 25642 - 25518
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatccaaatat 405  Q
    |||||||||||||||||||||||| | |||||||| ||||||| |||||||||||            ||||||||||||||| |||||||||||||||||    
T  25642 cccgatacttcaaaatggatgacgcaccgtatcccctgcgtattctgcaccgatac-----------ttcccgatacgtatccggagagtatccaaatat 25554  T
Q  406 taaattttatt-ttttaaaaaataattatccgatac 440  Q
    ||||||||||| |||||||||||||||||| |||||    
T  25553 taaattttatttttttaaaaaataattatctgatac 25518  T

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Target: scaffold0406 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 375 - 450
Target Start/End: Original strand, 13931 - 14003
Alignment:
Q  375 cccgatacgtatctggagagtatccaaatattaaattttattttttaaaaaataattatccgatactttccgatac 450  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||   ||||||||||| |||||||||||||||    
T  13931 cccgatacgtatccggagagtatccaaatattaaattttttttttt---aaataattatcagatactttccgatac 14003  T

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Target: scaffold0406; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 306 - 355
Target Start/End: Original strand, 13872 - 13921
Alignment:
Q  306 cccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcac 355  Q
    ||||||||||||||||||||||||||  |||||   ||||||||||||||    
T  13872 cccgatacttcaaaatggatgacgtactgtatcatctgcgtatcctgcac 13921  T

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Target: scaffold0240 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 301 - 420
Target Start/End: Original strand, 10600 - 10720
Alignment:
Q  301 tgaagccc-gatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatatttcccgatacgtatctggagagtatcc 399  Q
    |||||||| ||||||| ||||||||||| ||| | |||||| |||||||| ||||||||||  ||||||||| ||| ||||||||||| ||||||||||     
T  10600 tgaagcccagatactttaaaatggatgatgtaccatatcccctgcgtatcatgcaccgatacttgcccgatacttctcgatacgtatcaggagagtatca 10699  T
Q  400 aaatattaaattttatttttt 420  Q
     || ||||||| ||| |||||    
T  10700 gaagattaaatgttacttttt 10720  T

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