View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6219_low_3 (Length: 263)
Name: NF6219_low_3
Description: NF6219
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6219_low_3 |
 | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 196; Significance: 1e-107; HSPs: 31)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 4613660 - 4613417
Alignment:
| Q |
1 |
tccatcccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgcttt |
100 |
Q |
| |
|
||||||||||| |||||||||||||| ||| ||| ||||||| ||||||||| || | |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4613660 |
tccatcccaatttcccattcattgcatatatatctgcagtttgctggctgatccgcgaaaaatggccaacacaacattggcactccagcacatatgcttt |
4613561 |
T |
|
| Q |
101 |
cagtggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
4613560 |
cagtggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagctcgcgattaggcctctatc |
4613461 |
T |
|
| Q |
201 |
tgaaatttcattcacaaactctgatgacaaaacaactgagccgc |
244 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4613460 |
tgaaatttcattcacaaactctgatgacaaaacaactgagccgc |
4613417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 4585826 - 4586058
Alignment:
| Q |
1 |
tccatcccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgcttt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4585826 |
tccatcccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgcttt |
4585925 |
T |
|
| Q |
101 |
cagtggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatc |
200 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||| || ||||| ||||||||||||||||| |
|
|
| T |
4585926 |
cagtggttgagttccatccacagtgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcgattaggcctctatc |
4586025 |
T |
|
| Q |
201 |
tgaaatttcattcacaaactctgatgacaaaac |
233 |
Q |
| |
|
||||||||||||| |||||| ||||||||||| |
|
|
| T |
4586026 |
tgaaatttcattcttaaactcagatgacaaaac |
4586058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 4592421 - 4592655
Alignment:
| Q |
1 |
tccatcccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgcttt |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||||||||||||||||| || ||||||||||||||||||||| | |||||||||||| |||| |
|
|
| T |
4592421 |
tccatcccaatctcccattcattgtaaataagtctacagtttgttggctgatcactaaagaatggccaacacaacattggaattccagcacatatacttt |
4592520 |
T |
|
| Q |
101 |
cagtggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatc |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||| |
|
|
| T |
4592521 |
cagtggttgagttccatccacaatgagtcaagaatccaccaattgaagggtggtttaatacttgctcttgaggacaccagctcgcgattacgcctctatc |
4592620 |
T |
|
| Q |
201 |
tgaaatttcattcacaaactctgatgacaaaacaa |
235 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4592621 |
tgaaatttcattcacaaactccgatgacaaaacaa |
4592655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 4563901 - 4564142
Alignment:
| Q |
1 |
tccatcccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgcttt |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
4563901 |
tccatcccaatctcccattcattgtaaataagtctacagtttgttggctgatcaccaaagaatggccaacacaacattggaactccagcacatatgcttt |
4564000 |
T |
|
| Q |
101 |
cagtggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatc |
200 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||| || |||||||| |||| |||| ||||||||| |
|
|
| T |
4564001 |
cagtggttgagttccatccgcaatgagtcaagaatccgccaattgaagggtggttcaatactttctcctgtggacaccaacttgcaattaagcctctatc |
4564100 |
T |
|
| Q |
201 |
tgaaatttcattcacaaactctgatgacaaaacaactgagcc |
242 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
4564101 |
tgaaatttcattcacaaactcagatgacaaaacgactgagcc |
4564142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 7 - 232
Target Start/End: Original strand, 4461319 - 4461544
Alignment:
| Q |
7 |
ccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtgg |
106 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||||| |||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4461319 |
ccaatctcccatttgttgcaaataaatctacagtttgctggctgatcaccaaagaatggccaacacaacatcggcactccagcacatatgctttcagtgg |
4461418 |
T |
|
| Q |
107 |
ttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatctgaaat |
206 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||| ||||||||| |||| |||||||||||||||||||| |
|
|
| T |
4461419 |
ttgaattccatccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgcggacaccagcttgctattaggcctctatctgaaat |
4461518 |
T |
|
| Q |
207 |
ttcattcacaaactctgatgacaaaa |
232 |
Q |
| |
|
||||||||||||||| |||||||||| |
|
|
| T |
4461519 |
ttcattcacaaactcagatgacaaaa |
4461544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 4557315 - 4557556
Alignment:
| Q |
1 |
tccatcccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgcttt |
100 |
Q |
| |
|
||||| |||||||||||| |||||||||| ||| ||||||| |||||||||||||| |||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
4557315 |
tccatgccaatctcccatgtattgcaaatatatctgcagtttgctggctgatcagcaaaaaatggccaacacaacattggaactccagcagatatgcttt |
4557414 |
T |
|
| Q |
101 |
cagtggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatc |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| || |||||| ||||||||||||||||| |
|
|
| T |
4557415 |
cagtggttgagttccatccacaatgagtcaagaatccaccaattgaaggatggtttaatacttgctcttgcgggcaccagcccgcgattaggcctctatc |
4557514 |
T |
|
| Q |
201 |
tgaaatttcattcacaaactctgatgacaaaacaactgagcc |
242 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
4557515 |
tgaaatttcattgacaaactccgatgacaaaacaactgagcc |
4557556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 7 - 244
Target Start/End: Original strand, 4469999 - 4470236
Alignment:
| Q |
7 |
ccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtgg |
106 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||| | |||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
4469999 |
ccaatctcccattcattgcaaataaatctacaatttgctagctgatcaccaaagaatggccaacacaacattggcactccagcgcatatgctttcagtgg |
4470098 |
T |
|
| Q |
107 |
ttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatctgaaat |
206 |
Q |
| |
|
||||||||||||| ||||||||||||||||| || |||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
4470099 |
ttgagttccatccgcaatgagtcaagaatccaccgattgaagggtggttcagtacttgctcttgaggacaccagttcacgattaggcctctatctgaaat |
4470198 |
T |
|
| Q |
207 |
ttcattcacaaactctgatgacaaaacaactgagccgc |
244 |
Q |
| |
|
| |||| |||| ||||||||| ||||| || ||||||| |
|
|
| T |
4470199 |
tccatttacaatctctgatgagaaaactaccgagccgc |
4470236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 4515060 - 4514822
Alignment:
| Q |
4 |
atcccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcag |
103 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||| |||||| ||| |||| ||||||| | ||||||||||||||| |||||||| |||| |
|
|
| T |
4515060 |
atcccaatctcccattcattgcaaataaatctacagtttgttggttgatcaccaaagaattgccaacaaagcattggcactccagcgcatatgctctcag |
4514961 |
T |
|
| Q |
104 |
tggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatctga |
203 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||| |||||| |||||||| |||| |||||||||||||||| |
|
|
| T |
4514960 |
tggttgagttccatccgcaatgagtcaagaatccgccaattgaagggtggttcaaaactttctcttgtggacaccaacttgctattaggcctctatctgc |
4514861 |
T |
|
| Q |
204 |
aatttcattcacaaactctgatgacaaaacaactgagcc |
242 |
Q |
| |
|
|||||||||||||||||| || |||||||| |||||||| |
|
|
| T |
4514860 |
aatttcattcacaaactcagacgacaaaaccactgagcc |
4514822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 4601979 - 4602220
Alignment:
| Q |
1 |
tccatcccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgcttt |
100 |
Q |
| |
|
||||| ||||||||||||||||| ||||||| ||||||||||||||||||||| |||| || |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
4601979 |
tccataccaatctcccattcattacaaataaatctacagtttgttggctgatcggcaaaaaaaggccaacacaacatcggcactccagcacatatgcttt |
4602078 |
T |
|
| Q |
101 |
cagtggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || ||||||||||| || |||| |||||| |||||||| |||| |||||||||||||| |
|
|
| T |
4602079 |
cagtggttgagttccatccacaatgagtcaagaatccgccgatcgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatc |
4602178 |
T |
|
| Q |
201 |
tgaaatttcattcacaaactctgatgacaaaacaactgagcc |
242 |
Q |
| |
|
|||||||||||| |||||| |||||||||| |||||||| |
|
|
| T |
4602179 |
tgaaatttcatttgtaaactcagatgacaaaatcactgagcc |
4602220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 7 - 242
Target Start/End: Complemental strand, 4267102 - 4266867
Alignment:
| Q |
7 |
ccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtgg |
106 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4267102 |
ccaatctcccattcatagcaaataaatctacagtttgttggctgatcaccaaagaatggccaacacaacattggcactccagcacatatgctttcagtgg |
4267003 |
T |
|
| Q |
107 |
ttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatctgaaat |
206 |
Q |
| |
|
|||| |||||||| ||||||||||||||||| ||||| ||||||||||| || |||| ||||| |||||||| |||| ||||| |||||||||||||| |
|
|
| T |
4267002 |
ttgaattccatccgcaatgagtcaagaatccaccaatcgaagggtggttcaacactttatcttgtggacaccaacttgctattagtcctctatctgaaat |
4266903 |
T |
|
| Q |
207 |
ttcattcacaaactctgatgacaaaacaactgagcc |
242 |
Q |
| |
|
||| || | ||| || |||||||||||||||||||| |
|
|
| T |
4266902 |
ttctttaaaaaaatcagatgacaaaacaactgagcc |
4266867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 7 - 242
Target Start/End: Original strand, 4480889 - 4481124
Alignment:
| Q |
7 |
ccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtgg |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||| | ||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
4480889 |
ccaatctcccattcattgcaaataattctacggttaggtggctgatcggcaaagaatggccaacacaacattggcactccagcacatacactttcagtgg |
4480988 |
T |
|
| Q |
107 |
ttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatctgaaat |
206 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| |||||||||||||| || |||| |||||| |||||||| |||| ||||||||||||| |||||| |
|
|
| T |
4480989 |
ttgagttccatccgcaatgagtcaagaatccgccgattgaagggtggttcaaaactttctcttgtggacaccaacttgctattaggcctctatttgaaat |
4481088 |
T |
|
| Q |
207 |
ttcattcacaaactctgatgacaaaacaactgagcc |
242 |
Q |
| |
|
||| |||| | |||| |||||||| || |||||||| |
|
|
| T |
4481089 |
ttctttcaaatactcagatgacaacaccactgagcc |
4481124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 7 - 242
Target Start/End: Original strand, 4506053 - 4506288
Alignment:
| Q |
7 |
ccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtgg |
106 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||||||||||| |||||| ||| ||| |||||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
4506053 |
ccaatctccaattcattgcaaataaatctacagtttgttggttgatcaccaaagaacggccaacacagcattggcactccagcgcatatgctttcagtgg |
4506152 |
T |
|
| Q |
107 |
ttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatctgaaat |
206 |
Q |
| |
|
||||||||||||| ||||||||||||||||| |||||||||||||| ||||| |||| |||||| | ||||||| |||| || |||| |||||||||||| |
|
|
| T |
4506153 |
ttgagttccatccgcaatgagtcaagaatccaccaattgaagggtgatttaacactttctcttgtgaacaccagcttgctataaggcttctatctgaaat |
4506252 |
T |
|
| Q |
207 |
ttcattcacaaactctgatgacaaaacaactgagcc |
242 |
Q |
| |
|
|||||| |||||||||| |||||||| |||||||| |
|
|
| T |
4506253 |
ttcatttgcaaactctgaagacaaaaccactgagcc |
4506288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 4626141 - 4626382
Alignment:
| Q |
1 |
tccatcccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgcttt |
100 |
Q |
| |
|
||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||| |||||| |||||||| |||||||||| |
|
|
| T |
4626141 |
tccattccaatctcccattcattgcaaatatatctacaatttgttggctgatcagcaaaatttggccaacacagcattggaactccagcgcatatgcttt |
4626240 |
T |
|
| Q |
101 |
cagtggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatc |
200 |
Q |
| |
|
|| ||||||||||||||||||||||||| |||||||| ||||||||||| ||||| | ||||| |||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
4626241 |
caatggttgagttccatccacaatgagttaagaatccaccaattgaaggatggttcagtactttctcttgcggacaccagcttgcgattaggcctctatc |
4626340 |
T |
|
| Q |
201 |
tgaaatttcattcacaaactctgatgacaaaacaactgagcc |
242 |
Q |
| |
|
||||||||||||| ||||||| |||||| ||| || |||||| |
|
|
| T |
4626341 |
tgaaatttcattctcaaactcggatgacgaaataaatgagcc |
4626382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 3171931 - 3172172
Alignment:
| Q |
1 |
tccatcccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgcttt |
100 |
Q |
| |
|
||||||||||||| |||||| | |||||||||||||| ||| | ||| |||||||||| ||||||| |||||||||||||| ||||||||||| |||| |
|
|
| T |
3171931 |
tccatcccaatcttccattcttggcaaataattctactgttaggtggttgatcagcaaaaaatggcctacacaacattggcattccagcacatacacttt |
3172030 |
T |
|
| Q |
101 |
cagtggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatc |
200 |
Q |
| |
|
| ||||||||||||||||| || |||||||||||||||||||||||||| ||||| || |||| |||||| |||||||| |||| |||||||||||||| |
|
|
| T |
3172031 |
ccgtggttgagttccatccgcagtgagtcaagaatccgccaattgaaggatggttcaacactttctcttgcggacaccaacttgctattaggcctctatc |
3172130 |
T |
|
| Q |
201 |
tgaaatttcattcacaaactctgatgacaaaacaactgagcc |
242 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
3172131 |
tgaaatttcattcacaaactccgatgacaaaacaaccgagcc |
3172172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 4457784 - 4458025
Alignment:
| Q |
1 |
tccatcccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgcttt |
100 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |||||| ||||||||| |||| ||| ||||||||||| || ||||||||||||||| |||||||||| |
|
|
| T |
4457784 |
tccatcccaatctctcattcattgcaaataaatctacaacttgttggcttatcaccaaagaatggccaacgcagcattggcactccagcgcatatgcttt |
4457883 |
T |
|
| Q |
101 |
cagtggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatc |
200 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| || |||||||||||||| || |||| ||||| |||||||| |||| |||| ||||||||| |
|
|
| T |
4457884 |
cagtggttgagtttcatccacaatgagtcaagaatcctccgattgaagggtggttcaacactttatcttgtggacaccaacttgctattaagcctctatc |
4457983 |
T |
|
| Q |
201 |
tgaaatttcattcacaaactctgatgacaaaacaactgagcc |
242 |
Q |
| |
|
||| ||||||||||||| || |||||||||||||| ||||| |
|
|
| T |
4457984 |
agaagtttcattcacaaaatccgatgacaaaacaaccgagcc |
4458025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 7 - 242
Target Start/End: Original strand, 4598367 - 4598602
Alignment:
| Q |
7 |
ccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtgg |
106 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||||| | | ||||||| || | || || |||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
4598367 |
ccaatctcccattcattgcaaatatatctgcagttggcttgctgatccgcgaaaaagggacaacacaacattggcactccggcacatatactttcagtgg |
4598466 |
T |
|
| Q |
107 |
ttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatctgaaat |
206 |
Q |
| |
|
||||||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||| |||||||| |||| | || ||||||||||||||| |
|
|
| T |
4598467 |
ttgagttccatccgcaatgagttaagaatccaccaattgaaggatggtttaatacttgctcttgcagacaccagcttgcaactaagcctctatctgaaat |
4598566 |
T |
|
| Q |
207 |
ttcattcacaaactctgatgacaaaacaactgagcc |
242 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
4598567 |
ttcattcacaaactccgatgacaaaacaaccgagcc |
4598602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 7 - 232
Target Start/End: Complemental strand, 4260090 - 4259865
Alignment:
| Q |
7 |
ccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtgg |
106 |
Q |
| |
|
|||||||||||||| || ||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||| | ||||| ||||||||| ||| |
|
|
| T |
4260090 |
ccaatctcccattcgttacaaataaatctacagtttgttggctgatcagcaaaaaatggccaacacaacattggaacttcggcacaaatgctttcaatgg |
4259991 |
T |
|
| Q |
107 |
ttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatctgaaat |
206 |
Q |
| |
|
||||||||||||| |||||||| |||||||| |||| ||||| |||||| | |||||||||||| ||||||||| | ||||||||||||||||| ||||| |
|
|
| T |
4259990 |
ttgagttccatccgcaatgagttaagaatccaccaactgaagagtggttcagtacttgctcttgcggacaccagctcgcgattaggcctctatccgaaat |
4259891 |
T |
|
| Q |
207 |
ttcattcacaaactctgatgacaaaa |
232 |
Q |
| |
|
|||| || ||||||| |||||||||| |
|
|
| T |
4259890 |
ttcactctcaaactcagatgacaaaa |
4259865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 61 - 250
Target Start/End: Original strand, 4579682 - 4579871
Alignment:
| Q |
61 |
aatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaata |
160 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||| | || |
|
|
| T |
4579682 |
aatggccaacacaacattggaactccagcagatatgctttcagtgattgagttccatccgcaatgagtcaagaatccaccaattgaagggtggttcagta |
4579781 |
T |
|
| Q |
161 |
cttgctcttgaggacaccagtttgcgattaggcctctatctgaaatttcattcacaaactctgatgacaaaacaactgagccgctgatga |
250 |
Q |
| |
|
|||||||||| ||||||||| | | ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||| |
|
|
| T |
4579782 |
cttgctcttgcggacaccagctcgttattaggcctctatctgaaatttcattcacaaactccgatgacaaaacagctgagccgccgatga |
4579871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 7 - 232
Target Start/End: Original strand, 4622338 - 4622563
Alignment:
| Q |
7 |
ccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtgg |
106 |
Q |
| |
|
|||||||||||| |||||| ||| |||||||||||||||||||||||| | ||||||||||||| ||||| |||||||||||||||||||| |||| |
|
|
| T |
4622338 |
ccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaacacagcattgaaactccagcacatatgctttcggtgg |
4622437 |
T |
|
| Q |
107 |
ttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatctgaaat |
206 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||| ||||||||| | ||||| |||||| |||||||| |||||||||||||||| ||||||| |
|
|
| T |
4622438 |
ttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctcttgtggacaccaacctgcgattaggcctctacctgaaat |
4622537 |
T |
|
| Q |
207 |
ttcattcacaaactctgatgacaaaa |
232 |
Q |
| |
|
||||||| ||||||| |||||||||| |
|
|
| T |
4622538 |
ttcattctcaaactcagatgacaaaa |
4622563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 4617212 - 4617453
Alignment:
| Q |
1 |
tccatcccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgcttt |
100 |
Q |
| |
|
||||| ||||||||||||||||| ||||||| |||||||| ||||||||| || |||| ||||||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
4617212 |
tccataccaatctcccattcattacaaataaatctacagtctgttggctggtcggcaaaaaatggccaacacaacattggcactccagcgcatatacttt |
4617311 |
T |
|
| Q |
101 |
cagtggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatc |
200 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||| || |||||||||||||| || |||| ||||| |||||||| |||| |||||||||||||| |
|
|
| T |
4617312 |
cagtggttgaattccatccgcaatgagtcaagaatcctccgattgaagggtggttcaacactttgtcttgtggacaccaacttgctattaggcctctatc |
4617411 |
T |
|
| Q |
201 |
tgaaatttcattcacaaactctgatgacaaaacaactgagcc |
242 |
Q |
| |
|
|| ||||||||| |||||| ||||| |||| |||||||| |
|
|
| T |
4617412 |
tgcaatttcatttgtaaactcagatgagaaaatcactgagcc |
4617453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 7 - 214
Target Start/End: Original strand, 4560702 - 4560909
Alignment:
| Q |
7 |
ccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtgg |
106 |
Q |
| |
|
||||||| |||||||||||||||| ||| ||||||| ||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
4560702 |
ccaatcttccattcattgcaaatatatcttcagtttgctggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtgg |
4560801 |
T |
|
| Q |
107 |
ttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatctgaaat |
206 |
Q |
| |
|
||||||||||||| ||||||||||||||||| || | ||| |||||||| ||||||| |||||| |||||||| |||| ||||| |||||||||||||| |
|
|
| T |
4560802 |
ttgagttccatccgcaatgagtcaagaatccaccgactgatgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaat |
4560901 |
T |
|
| Q |
207 |
ttcattca |
214 |
Q |
| |
|
||| |||| |
|
|
| T |
4560902 |
ttctttca |
4560909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 7 - 242
Target Start/End: Original strand, 4571168 - 4571403
Alignment:
| Q |
7 |
ccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtgg |
106 |
Q |
| |
|
|||||||||||| |||||| ||| ||||||||||| |||||||||||||| |||||| ||||||||||||| ||||||| | |||||||||| || | |
|
|
| T |
4571168 |
ccaatctcccatgtattgcagatatatctacagtttgctggctgatcagcaaaaaatggctaacacaacattggaactccagtagatatgctttcggtcg |
4571267 |
T |
|
| Q |
107 |
ttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatctgaaat |
206 |
Q |
| |
|
|||||||||||||||| ||||||||||| || ||||||||||| ||||| ||||||| |||||| | ||||| || |||||||||||||||||||| |
|
|
| T |
4571268 |
ttgagttccatccacagtgagtcaagaaaccaccaattgaaggatggttcaatactttctcttgcgagcaccaaccagcaattaggcctctatctgaaat |
4571367 |
T |
|
| Q |
207 |
ttcattcacaaactctgatgacaaaacaactgagcc |
242 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4571368 |
ttcattcacaaactccgatgacaaaacaactgagcc |
4571403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 7 - 242
Target Start/End: Original strand, 4574504 - 4574739
Alignment:
| Q |
7 |
ccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtgg |
106 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||||||| ||||||||| | || ||||||||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
4574504 |
ccaatctcccattcattgcaaatatatctgcagtttgctggctgatccgaaaaaaatggccaacataacattggaactccagcacatatgctttcagtgg |
4574603 |
T |
|
| Q |
107 |
ttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatctgaaat |
206 |
Q |
| |
|
||||||||||||| ||||||||||||||||| || | |||| ||||||| ||||||| |||||| |||||||| |||| ||||| |||||||||||||| |
|
|
| T |
4574604 |
ttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaat |
4574703 |
T |
|
| Q |
207 |
ttcattcacaaactctgatgacaaaacaactgagcc |
242 |
Q |
| |
|
||| |||| ||| || ||||| ||||| || ||||| |
|
|
| T |
4574704 |
ttctttcaaaaaatcagatgagaaaaccaccgagcc |
4574739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 4490295 - 4490068
Alignment:
| Q |
3 |
catcccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttca |
102 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||| | | ||| |||||||||| ||||||||||||||||||||||||||||||||||| || || |
|
|
| T |
4490295 |
catcccaatctcccattcttcgcaaataattctactgctaagtggttgatcagcaaaaaatggccaacacaacattggcactccagcacatatactctcc |
4490196 |
T |
|
| Q |
103 |
gtggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatctg |
202 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| |||||||||||||| || ||||| | |||||| |||||||| |||| ||||| |||||||||| |
|
|
| T |
4490195 |
atgattgagttccatccacaatgagtcaagaatccaccaattgaagggtgattcaataccttctcttgtggacaccaacttgctattagtcctctatctg |
4490096 |
T |
|
| Q |
203 |
aaatttcattcacaaactctgatgacaa |
230 |
Q |
| |
|
||||||| |||| ||| || |||||||| |
|
|
| T |
4490095 |
aaatttctttcaaaaaatcagatgacaa |
4490068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 7 - 242
Target Start/End: Original strand, 4516517 - 4516752
Alignment:
| Q |
7 |
ccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtgg |
106 |
Q |
| |
|
|||||||||||||||||||||||| ||| || ||||||||||| ||||||| || ||||||||||||||||| ||||| ||||| |||||||| | | |
|
|
| T |
4516517 |
ccaatctcccattcattgcaaatatatctgcaatttgttggctgctcagcaaaaaaaggccaacacaacattggtactccggcacagatgctttccattg |
4516616 |
T |
|
| Q |
107 |
ttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatctgaaat |
206 |
Q |
| |
|
| ||||||||||||||||||||||||||||| |||| |||||| ||||| || |||| |||||| ||||||||| |||| |||| ||||||||| ||| | |
|
|
| T |
4516617 |
tggagttccatccacaatgagtcaagaatcctccaactgaaggatggttcaacactttctcttgcggacaccagcttgctattacgcctctatccgaagt |
4516716 |
T |
|
| Q |
207 |
ttcattcacaaactctgatgacaaaacaactgagcc |
242 |
Q |
| |
|
|||||||||||| || |||||||||| ||| ||||| |
|
|
| T |
4516717 |
ttcattcacaaaatcggatgacaaaataaccgagcc |
4516752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 4256548 - 4256349
Alignment:
| Q |
7 |
ccaatctcccattcattgcaaataattctacagtttgttgg-ctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtg |
105 |
Q |
| |
|
|||||||||||||| | ||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||| || |
|
|
| T |
4256548 |
ccaatctcccattcgctacaaataaatctacagtttgttggtctgatcagcaaaaaatggccaacacaacattggaactccggcacaaatgctttcaatg |
4256449 |
T |
|
| Q |
106 |
gttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatctgaaa |
205 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||| ||||| |||||| | |||||||||||| |||||||| | ||||||| |||||||| |||| |
|
|
| T |
4256448 |
gttgagttccatcctcaatgagtcaagaatccaccaactgaagagtggttcagtacttgctcttgcggacaccaactctcgattagtcctctatccgaaa |
4256349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 7 - 202
Target Start/End: Original strand, 4493151 - 4493346
Alignment:
| Q |
7 |
ccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtgg |
106 |
Q |
| |
|
||||||||| ||||||||||||| | |||||||||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||| ||| || | |
|
|
| T |
4493151 |
ccaatctccaattcattgcaaatcaatctacagtttgttggctgatcactaaagaaaggccaacacaacattggcactccggcacatatgtttttggtag |
4493250 |
T |
|
| Q |
107 |
ttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatctg |
202 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| ||| ||||||| | | || |||||| |||||||| | || |||||||||||||||| |
|
|
| T |
4493251 |
ttgagttccatccacaatgagtcaagaatccaccaatcgaatggtggttcagcagtttctcttgtggacaccaactagcaattaggcctctatctg |
4493346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 4504337 - 4504110
Alignment:
| Q |
3 |
catcccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttca |
102 |
Q |
| |
|
|||||||||||||||||| | ||||||||| | | || ||||||||||| || |||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
4504337 |
catcccaatctcccattcttcgcaaataatgttgctattaagtggctgatcagaaaaaaatggccaacacaacattggcactccagcacaaacactttca |
4504238 |
T |
|
| Q |
103 |
gtggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatctg |
202 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || |||||||||||||| || |||| ||||| |||||||| |||| | || ||||||| | |
|
|
| T |
4504237 |
gtggttgagttccatccacaatgagtcaagaatcctccgattgaagggtggttcaacactttatcttgtggacaccaacttgctacaagtcctctattag |
4504138 |
T |
|
| Q |
203 |
aaatttcattcacaaactctgatgacaa |
230 |
Q |
| |
|
|| ||||||||||||| || |||||||| |
|
|
| T |
4504137 |
aagtttcattcacaaaatcagatgacaa |
4504110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 91 - 232
Target Start/End: Complemental strand, 4299673 - 4299532
Alignment:
| Q |
91 |
catatgctttcagtggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgatta |
190 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||| | |||||| ||||| |||||| || ||||| ||| |
|
|
| T |
4299673 |
catatgctttcaatggttgagttccatccacagtgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacactagcttgcggtta |
4299574 |
T |
|
| Q |
191 |
ggcctctatctgaaatttcattcacaaactctgatgacaaaa |
232 |
Q |
| |
|
||||||||| ||||||||||||| ||||||| |||||||||| |
|
|
| T |
4299573 |
ggcctctatttgaaatttcattctcaaactcagatgacaaaa |
4299532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 37 - 242
Target Start/End: Original strand, 4568282 - 4568487
Alignment:
| Q |
37 |
cagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccacaatgagtcaagaatc |
136 |
Q |
| |
|
|||| ||||||||| |||| || || |||||||| |||||||| |||| ||||| |||||||| || |||||||||||||||||||||||||||| |
|
|
| T |
4568282 |
cagtatgttggctgctcagaaaaaaaaggccaacataacattggtactctggcacaaatgctttccaatgtggagttccatccacaatgagtcaagaatc |
4568381 |
T |
|
| Q |
137 |
cgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatctgaaatttcattcacaaactctgatgacaaaacaac |
236 |
Q |
| |
|
|||| |||||||||||| || ||||||||||| ||||||||| |||| ||| |||||||||| ||| || ||||||||||||| |||||||||| ||| |
|
|
| T |
4568382 |
gtccaactgaagggtggttcaacacttgctcttgcggacaccagcttgctatttggcctctatccgaagttccattcacaaactcggatgacaaaataac |
4568481 |
T |
|
| Q |
237 |
tgagcc |
242 |
Q |
| |
|
|||||| |
|
|
| T |
4568482 |
tgagcc |
4568487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 4391996 - 4391832
Alignment:
| Q |
74 |
acattggcactccagcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgagg |
173 |
Q |
| |
|
||||||| |||| || ||| ||||||||| ||| |||||| ||||||||||| || |||||||| | |||| |||||||||| ||||||||||||| || |
|
|
| T |
4391996 |
acattggaactctagaacaaatgctttcaatgggtgagtttcatccacaatgcgttaagaatccacaaattcaagggtggttcaatacttgctctttcgg |
4391897 |
T |
|
| Q |
174 |
acaccagtttgcga----ttaggcctctatctgaaatttcattcacaaactctgatgacaaaaca |
234 |
Q |
| |
|
|||||| |||||| ||| ||||||||||||||||||||| || |||| || |||||||| |
|
|
| T |
4391896 |
acaccatcttgcgactagatagacctctatctgaaatttcattctcatactcatataacaaaaca |
4391832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 156; Significance: 6e-83; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 1281304 - 1281547
Alignment:
| Q |
1 |
tccatcccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgcttt |
100 |
Q |
| |
|
||||| ||||||| ||||||||| ||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1281304 |
tccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaaatggccaacacaacattggcactccagcacatatgcttt |
1281403 |
T |
|
| Q |
101 |
cagtggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatc |
200 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| || |||||||||||||| || |||| |||||| |||||||| |||| |||||||||||||| |
|
|
| T |
1281404 |
cagtggttgagttccatccgcaatgagtcaagaatccaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatc |
1281503 |
T |
|
| Q |
201 |
tgaaatttcattcacaaactctgatgacaaaacaactgagccgc |
244 |
Q |
| |
|
||||||||||||| |||| || |||||||||| |||||||||| |
|
|
| T |
1281504 |
tgaaatttcattcgcaaagtcagatgacaaaatcactgagccgc |
1281547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 154; Significance: 9e-82; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 7 - 232
Target Start/End: Complemental strand, 3655 - 3430
Alignment:
| Q |
7 |
ccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtgg |
106 |
Q |
| |
|
|||||||||||||| |||||||||| |||||||||||||||||||||| ||| |||||||||||| | |||||| |||||||| |||||||||||||||| |
|
|
| T |
3655 |
ccaatctcccattcgttgcaaataaatctacagtttgttggctgatcaccaaagaatggccaacaaagcattggtactccagcgcatatgctttcagtgg |
3556 |
T |
|
| Q |
107 |
ttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatctgaaat |
206 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||||||||||||||| | | |||||||||||| ||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
3555 |
ttgaattccatccacaatgagtcaagaatccaccaattgaagggtggatcagtacttgctcttgtggacaccagcttgtgattaggcctctatctgaaat |
3456 |
T |
|
| Q |
207 |
ttcattcacaaactctgatgacaaaa |
232 |
Q |
| |
|
||||||| |||| ||||||||||||| |
|
|
| T |
3455 |
ttcattctcaaattctgatgacaaaa |
3430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 154; Significance: 9e-82; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 1674416 - 1674657
Alignment:
| Q |
1 |
tccatcccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgcttt |
100 |
Q |
| |
|
||||| ||||||| ||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
1674416 |
tccataccaatcttccattcattacaaataaatctacagtttgttggctgatcagcaaaaaatggccaacacaacattggcactccagcgcatatgcttt |
1674515 |
T |
|
| Q |
101 |
cagtggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatc |
200 |
Q |
| |
|
||||||||||||||||||| || || |||||||||||||| |||||||||||||| || |||| |||||| |||||||| |||| |||||||||||||| |
|
|
| T |
1674516 |
cagtggttgagttccatccgcagtgtgtcaagaatccgccgattgaagggtggttcaacactttctcttgtggacaccaatttgatattaggcctctatc |
1674615 |
T |
|
| Q |
201 |
tgaaatttcattcacaaactctgatgacaaaacaactgagcc |
242 |
Q |
| |
|
||||||||| |||| |||||| ||||||||||| |||||||| |
|
|
| T |
1674616 |
tgaaatttctttcataaactcagatgacaaaaccactgagcc |
1674657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 16686209 - 16685977
Alignment:
| Q |
1 |
tccatcccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgcttt |
100 |
Q |
| |
|
||||| |||||||||||||||||||||||| ||| || |||| |||||||||||||| |||||||||||||||||||| ||||||||| |||| |||| |
|
|
| T |
16686209 |
tccatgccaatctcccattcattgcaaatatatctgcattttgctggctgatcagcaaaaaatggccaacacaacattggaactccagcatatatacttt |
16686110 |
T |
|
| Q |
101 |
cagtggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| || |||||||| |||||||||||||||||||| || |||||| | |||||||||| |||||| |
|
|
| T |
16686109 |
cagtggttgagttccatccacaatgagttaagaatccaccgattgaaggatggtttaatacttgctcttgcgggcaccagctcgcgattaggcttctatc |
16686010 |
T |
|
| Q |
201 |
tgaaatttcattcacaaactctgatgacaaaac |
233 |
Q |
| |
|
||| ||||||||| |||||| ||||||||||| |
|
|
| T |
16686009 |
tgagatttcattcttaaactcagatgacaaaac |
16685977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 4 - 232
Target Start/End: Complemental strand, 20863782 - 20863554
Alignment:
| Q |
4 |
atcccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcag |
103 |
Q |
| |
|
|||||||||||||||| |||||||| ||| |||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| |
|
|
| T |
20863782 |
atcccaatctcccatttgttgcaaatgtatctgcagtttgtcggctgatcagcaaaaaatggccagcacaacattggcactccagcacatatgctctcaa |
20863683 |
T |
|
| Q |
104 |
tggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatctga |
203 |
Q |
| |
|
||||||||||||||||||||||||| | ||||| ||||||||||| ||||| || || | |||||| |||||||| | |||||||||||||||||||| |
|
|
| T |
20863682 |
tggttgagttccatccacaatgagttagaaatccaccaattgaaggatggttcaacaccttctcttgtggacaccaactcgcgattaggcctctatctga |
20863583 |
T |
|
| Q |
204 |
aatttcattcacaaactctgatgacaaaa |
232 |
Q |
| |
|
|||||||||||||||| | ||||| |||| |
|
|
| T |
20863582 |
aatttcattcacaaacgcagatgaaaaaa |
20863554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 1969181 - 1969140
Alignment:
| Q |
105 |
ggttgagttccatccacaatgagtcaagaatccgccaattga |
146 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||| |||||||| |
|
|
| T |
1969181 |
ggttgaattccagccacaatgagtcaagaatccaccaattga |
1969140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 148; Significance: 3e-78; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 7 - 242
Target Start/End: Original strand, 24103195 - 24103430
Alignment:
| Q |
7 |
ccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtgg |
106 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24103195 |
ccaatctcccattcatagcaaataaatctacagtttgttggttgatcaccaaagaatggccaacacaacattggcactccagcacatatgctttcagtgg |
24103294 |
T |
|
| Q |
107 |
ttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatctgaaat |
206 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||||| |||||||||||||| |||| ||||| |||||||| |||| ||||| ||||||||||||| |
|
|
| T |
24103295 |
ttgagttccatccgcaatgagtcaagaatccaccaatcgaagggtggtttaacactttatcttgtggacaccaacttgctattagtcctctatctgaaac |
24103394 |
T |
|
| Q |
207 |
ttcattcacaaactctgatgacaaaacaactgagcc |
242 |
Q |
| |
|
||| || | ||| || |||||||||||||||||||| |
|
|
| T |
24103395 |
ttctttaaaaaaatcagatgacaaaacaactgagcc |
24103430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 28000041 - 27999800
Alignment:
| Q |
1 |
tccatcccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgcttt |
100 |
Q |
| |
|
||||| ||||||| ||||||||| ||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
28000041 |
tccataccaatcttccattcattacaaataaatctacagtttgttggctgatcagcaaaaaatgaccaacacaacattggcactccagcgcatatgcttt |
27999942 |
T |
|
| Q |
101 |
cagtggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatc |
200 |
Q |
| |
|
| ||||||||||||||||| || ||||||||||| |||| |||||||||||||| || |||| |||||| |||||||| |||| |||||||||||||| |
|
|
| T |
27999941 |
cggtggttgagttccatccgcagtgagtcaagaacccgctgattgaagggtggttcaaaactttctcttgtggacaccaatttgatattaggcctctatc |
27999842 |
T |
|
| Q |
201 |
tgaaatttcattcacaaactctgatgacaaaacaactgagcc |
242 |
Q |
| |
|
||||||||| ||| |||||| ||||||||||| |||||||| |
|
|
| T |
27999841 |
tgaaatttctttcctaaactcagatgacaaaaccactgagcc |
27999800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 149
Target Start/End: Complemental strand, 20155290 - 20155247
Alignment:
| Q |
106 |
gttgagttccatccacaatgagtcaagaatccgccaattgaagg |
149 |
Q |
| |
|
||||| |||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
20155290 |
gttgaattccatccacaatgtgtcaagaatcctccaattgaagg |
20155247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 38 - 232
Target Start/End: Complemental strand, 4591 - 4397
Alignment:
| Q |
38 |
agtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccacaatgagtcaagaatcc |
137 |
Q |
| |
|
|||||||||||||||| || | |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||| |
|
|
| T |
4591 |
agtttgttggctgatcggcgaaaaatggccaacacaacattggcactcctacacatatgctttcaatggttgagttccatccgcaatgagtcaagaatcc |
4492 |
T |
|
| Q |
138 |
gccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatctgaaatttcattcacaaactctgatgacaaaa |
232 |
Q |
| |
|
||||||||||||||||| | |||||||||||| ||||||||| | || ||||||||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
4491 |
accaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactcagatgacaaaa |
4397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 7 - 229
Target Start/End: Original strand, 3086616 - 3086838
Alignment:
| Q |
7 |
ccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtgg |
106 |
Q |
| |
|
|||||||||||| |||||| ||| |||||||||| |||| ||||| || |||||||||||||||||||||||||||||| || ||||||| | |
|
|
| T |
3086616 |
ccaatctcccatatattgcagatatatctacagtttattggttgatctccataaaatggccaacacaacattggcactccagcaagtacgctttcaaccg |
3086715 |
T |
|
| Q |
107 |
ttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatctgaaat |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||| ||||||||| |||||||||| |||||||||||||| |
|
|
| T |
3086716 |
ttgagttccatccacaatgagtcaagaatccaccaattgaagggtgattcaatacttgctcttgcggacaccagcttgcgattagacctctatctgaaat |
3086815 |
T |
|
| Q |
207 |
ttcattcacaaactctgatgaca |
229 |
Q |
| |
|
||| ||| ||||||| ||||||| |
|
|
| T |
3086816 |
ttctttctcaaactcagatgaca |
3086838 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 48532826 - 48532780
Alignment:
| Q |
106 |
gttgagttccatccacaatgagtcaagaatccgccaattgaagggtg |
152 |
Q |
| |
|
||||| |||||||||||||| || |||||||| |||||||||||||| |
|
|
| T |
48532826 |
gttgaattccatccacaatgtgttaagaatcctccaattgaagggtg |
48532780 |
T |
|
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Target: scaffold0475 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 200
Target Start/End: Complemental strand, 3620 - 3428
Alignment:
| Q |
7 |
ccaatctcccattcattgcaaataattctacagtttgttggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtgg |
106 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||| || || | | |||||||||| || |||||| ||||||| ||| ||||||||| ||| |
|
|
| T |
3620 |
ccaatctcccattcattccaaatgcatctacagtttgttgagtgttcggggaaaaatggccaacgcagcattggaactccagaacaaatgctttcaatgg |
3521 |
T |
|
| Q |
107 |
ttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagtttgcgattaggcctctatc |
200 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||| | |||||||||| || |||||||||| |||||||| |||||| ||||||| |||| |
|
|
| T |
3520 |
ttgagttccatccacaatgagttaagaatccaccaact-aagggtggttcaacacttgctcttacggacaccatcttgcgactaggcctatatc |
3428 |
T |
|
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