View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6221_high_35 (Length: 239)
Name: NF6221_high_35
Description: NF6221
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6221_high_35 |
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Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 4 - 222
Target Start/End: Complemental strand, 44154478 - 44154261
Alignment:
| Q |
4 |
attatactttcactttaagttattagatgaagtatcaaacaattttaaatttttattaaagaattgtatagagtttatctaccaataagaacttttactt |
103 |
Q |
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| T |
44154478 |
attatactttcactttaagttattagatgaagtatcaaacaattttaaaattttat-aaagaattgtatagagtttatctaccaataagaacttttactt |
44154380 |
T |
|
| Q |
104 |
caatggtttgatttgtgagttagtaagtggattaatgtgaacttaattatttctaaataagtcgactccttctctaaaaatattaaatactatgtggaat |
203 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |
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| T |
44154379 |
caatggtttgatttgtgagttagtaagtggattaatgtgaacttaattatttctaaataagtcgactccttctctaaaaatattaaagactacgtggaat |
44154280 |
T |
|
| Q |
204 |
atgacttgaaagaccttta |
222 |
Q |
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||||||||||||||||||| |
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| T |
44154279 |
atgacttgaaagaccttta |
44154261 |
T |
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