View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6221_high_38 (Length: 236)
Name: NF6221_high_38
Description: NF6221
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6221_high_38 |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 12953039 - 12953259
Alignment:
| Q |
1 |
cctactcttcttcgaaagctcttcacaaaattcctccttccaccattcccttggtttcctattcttctttcctttaactttctcctcatcaagtgaagcc |
100 |
Q |
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| T |
12953039 |
cctactcttcttcgaaagctcttcacaaaattcctccttccaccattcccttggttttctattcttctttcctttaactttctcctcatcaagtgaagcc |
12953138 |
T |
|
| Q |
101 |
caccattccaatttcttcctctgcttcttcttaccctccaccttcgactgcgctgccaccacatcaccaccaccaccggaacaaattgaagaaccagaac |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
12953139 |
caccattccaatttcttcctctgcttcttcttaccctccaccttcgactgcgctgccaccacatcaccaccaccaccggaacaaatcgaagaaccagaac |
12953238 |
T |
|
| Q |
201 |
caacccactcactactcttag |
221 |
Q |
| |
|
||||||||||||||||||||| |
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| T |
12953239 |
caacccactcactactcttag |
12953259 |
T |
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