View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6221_high_40 (Length: 225)
Name: NF6221_high_40
Description: NF6221
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6221_high_40 |
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Alignment Details
Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 46912472 - 46912670
Alignment:
| Q |
19 |
caattcaataatgtctactgcatgaagcttctagttatagggtgaaggaaaggaactatccatcatgagaaggatgtgtaccaggattgtctggaatgaa |
118 |
Q |
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| T |
46912472 |
caattcaataatgtctactgcatgaagcttctagttatagggtgaaggaaaggaactatccatcatgagaaggatgtgtactaggattgtctggaatgaa |
46912571 |
T |
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| Q |
119 |
ttgacatccaaataagtcatcgtgtctataatacactgggcactggaaatatgtcatcatctacctgcagaccattggatacactcggaatagtataat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
46912572 |
ttgacatccaaataagtcatcgtgtctataatacactgggcactggaaatgtgtcatcatctacctgcagaccattggatacactcggaataatataat |
46912670 |
T |
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