View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6221_low_20 (Length: 321)
Name: NF6221_low_20
Description: NF6221
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6221_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 49 - 309
Target Start/End: Complemental strand, 32131841 - 32131583
Alignment:
| Q |
49 |
ccaaaatagaatgattggggtggccaactatnnnnnnnnnnnnntgtaatataaaattgaaccccaagttaaaagtaataacacacttggaatatgctta |
148 |
Q |
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| T |
32131841 |
ccaaaatagaatgattggggtggccaactataaaaaataaaaaatgtaatataaaattgaaccccaagttaaaaataataacacacttggaatatgc--a |
32131744 |
T |
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| Q |
149 |
cttatgtgcttattttgaaagtatcacattttatctttagtttaaagttgtggcatcgaactttgcacaggtttgacaagcacattcgctatgaatcaag |
248 |
Q |
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| T |
32131743 |
cttatgtgcttattttgaaagtatcacattttatctttagtttaaagttgtggcatcgaactttgcacaggtttgacaagcacattcgctatgaatcaag |
32131644 |
T |
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| Q |
249 |
gaaggctagggctgatacgagaaagagagtgagagggcgatttgttaaggcaactgatgat |
309 |
Q |
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| T |
32131643 |
gaaggctagggctgatacgagaaagagagtgagagggcgatttgttaaggcaactgatgat |
32131583 |
T |
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