View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6221_low_7 (Length: 480)

Name: NF6221_low_7
Description: NF6221
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6221_low_7
NF6221_low_7
[»] chr2 (76 HSPs)
chr2 (230-480)||(35106033-35106281)
chr2 (229-323)||(35055269-35055363)
chr2 (78-140)||(35379015-35379077)
chr2 (76-142)||(44443328-44443394)
chr2 (71-140)||(14666557-14666626)
chr2 (71-140)||(34652028-34652097)
chr2 (71-136)||(43199776-43199841)
chr2 (75-142)||(680510-680577)
chr2 (75-146)||(12313169-12313240)
chr2 (73-140)||(43910993-43911060)
chr2 (97-140)||(43985021-43985064)
chr2 (71-140)||(9174824-9174894)
chr2 (97-147)||(9595260-9595310)
chr2 (71-140)||(1056121-1056190)
chr2 (94-159)||(3227698-3227763)
chr2 (75-140)||(29316771-29316836)
chr2 (76-140)||(16867748-16867812)
chr2 (384-480)||(35183982-35184078)
chr2 (71-146)||(15120186-15120261)
chr2 (71-118)||(41809237-41809284)
chr2 (75-142)||(41817175-41817242)
chr2 (71-140)||(26143631-26143701)
chr2 (70-140)||(33942159-33942229)
chr2 (82-140)||(38078413-38078471)
chr2 (71-117)||(44606102-44606148)
chr2 (71-140)||(1939324-1939393)
chr2 (96-149)||(3067396-3067449)
chr2 (75-140)||(7871652-7871717)
chr2 (75-140)||(8017443-8017508)
chr2 (77-142)||(9530726-9530791)
chr2 (71-140)||(32821818-32821887)
chr2 (71-140)||(33941918-33941987)
chr2 (71-140)||(43065442-43065511)
chr2 (71-140)||(43141880-43141949)
chr2 (91-139)||(656789-656837)
chr2 (73-133)||(1893275-1893335)
chr2 (62-118)||(12147488-12147544)
chr2 (86-142)||(12464480-12464536)
chr2 (420-480)||(35177984-35178044)
chr2 (72-140)||(35485926-35485994)
chr2 (97-140)||(1810673-1810716)
chr2 (84-131)||(7928304-7928351)
chr2 (79-118)||(8820292-8820331)
chr2 (77-140)||(10563556-10563619)
chr2 (91-134)||(12464679-12464722)
chr2 (71-110)||(30538165-30538204)
chr2 (104-147)||(36863650-36863693)
chr2 (75-142)||(42420004-42420071)
chr2 (75-140)||(1625909-1625975)
chr2 (71-157)||(7282988-7283074)
chr2 (76-118)||(11063519-11063561)
chr2 (94-140)||(15977994-15978040)
chr2 (75-140)||(26626882-26626948)
chr2 (78-140)||(35378531-35378593)
chr2 (76-150)||(35993377-35993451)
chr2 (75-140)||(40682390-40682455)
chr2 (75-157)||(41144202-41144284)
chr2 (94-140)||(44590043-44590089)
chr2 (97-142)||(1056371-1056416)
chr2 (71-140)||(8187445-8187514)
chr2 (71-139)||(11488287-11488353)
chr2 (70-142)||(16398121-16398194)
chr2 (79-140)||(19333325-19333386)
chr2 (71-147)||(30552635-30552712)
chr2 (71-116)||(32614940-32614985)
chr2 (75-140)||(33256749-33256814)
chr2 (427-480)||(35055120-35055173)
chr2 (71-140)||(36415666-36415734)
chr2 (75-140)||(40158727-40158792)
chr2 (71-140)||(42817368-42817437)
chr2 (99-140)||(44644287-44644328)
chr2 (71-116)||(45314901-45314946)
chr2 (75-143)||(6772516-6772584)
chr2 (96-140)||(24097817-24097861)
chr2 (420-480)||(35169693-35169753)
chr2 (73-137)||(43635095-43635159)
[»] chr1 (91 HSPs)
chr1 (71-139)||(37593676-37593744)
chr1 (75-140)||(34290245-34290310)
chr1 (71-136)||(46252674-46252739)
chr1 (75-140)||(10199404-10199469)
chr1 (75-140)||(7136994-7137059)
chr1 (76-140)||(25479590-25479654)
chr1 (75-135)||(28689448-28689508)
chr1 (75-142)||(6292500-6292567)
chr1 (71-138)||(31517732-31517799)
chr1 (78-140)||(37842354-37842416)
chr1 (73-130)||(8016276-8016333)
chr1 (75-140)||(10854742-10854807)
chr1 (77-142)||(14629964-14630029)
chr1 (91-140)||(26779937-26779986)
chr1 (75-140)||(27140487-27140552)
chr1 (95-140)||(43332493-43332538)
chr1 (76-140)||(4576814-4576878)
chr1 (75-135)||(5886990-5887050)
chr1 (73-140)||(19389910-19389978)
chr1 (93-149)||(26461955-26462011)
chr1 (73-135)||(15784343-15784406)
chr1 (75-134)||(38170686-38170745)
chr1 (73-140)||(38867825-38867892)
chr1 (74-140)||(7218069-7218135)
chr1 (83-141)||(15361048-15361106)
chr1 (75-160)||(30815649-30815738)
chr1 (71-124)||(42397749-42397803)
chr1 (76-118)||(47877140-47877182)
chr1 (95-140)||(5047155-5047200)
chr1 (79-140)||(7262518-7262579)
chr1 (95-136)||(7472324-7472365)
chr1 (91-140)||(12564511-12564560)
chr1 (71-160)||(23373305-23373393)
chr1 (75-140)||(31118052-31118117)
chr1 (75-156)||(48748601-48748682)
chr1 (75-140)||(52190138-52190203)
chr1 (73-140)||(1509959-1510027)
chr1 (71-143)||(4699607-4699679)
chr1 (91-139)||(11893605-11893653)
chr1 (71-159)||(29834897-29834985)
chr1 (76-140)||(30257692-30257756)
chr1 (75-160)||(35707194-35707281)
chr1 (84-132)||(38503470-38503518)
chr1 (71-110)||(3223706-3223745)
chr1 (74-117)||(3224455-3224498)
chr1 (75-142)||(4445715-4445782)
chr1 (76-147)||(4920767-4920838)
chr1 (81-148)||(6279400-6279467)
chr1 (71-142)||(10280656-10280727)
chr1 (70-117)||(10809377-10809424)
chr1 (92-139)||(35590905-35590952)
chr1 (70-140)||(1565526-1565596)
chr1 (91-133)||(11129324-11129366)
chr1 (82-140)||(12564877-12564935)
chr1 (71-113)||(29635383-29635425)
chr1 (75-141)||(43338124-43338190)
chr1 (73-135)||(43722322-43722384)
chr1 (86-140)||(45975699-45975753)
chr1 (97-135)||(51190862-51190900)
chr1 (71-140)||(51695486-51695556)
chr1 (71-160)||(3070082-3070174)
chr1 (71-140)||(3924633-3924702)
chr1 (75-140)||(4202147-4202212)
chr1 (91-140)||(4548730-4548779)
chr1 (76-109)||(4549888-4549921)
chr1 (75-136)||(4622106-4622167)
chr1 (79-140)||(4700066-4700127)
chr1 (71-140)||(4868409-4868478)
chr1 (73-118)||(5276324-5276369)
chr1 (75-140)||(12477283-12477348)
chr1 (75-140)||(12593449-12593514)
chr1 (71-116)||(15579515-15579560)
chr1 (76-137)||(16981933-16981994)
chr1 (75-140)||(24460403-24460468)
chr1 (71-135)||(26185524-26185589)
chr1 (75-140)||(27963366-27963431)
chr1 (83-140)||(28077073-28077130)
chr1 (75-140)||(28909999-28910064)
chr1 (76-133)||(28935873-28935930)
chr1 (83-140)||(32182280-32182337)
chr1 (73-110)||(34278687-34278724)
chr1 (71-140)||(35080061-35080130)
chr1 (75-136)||(35925703-35925764)
chr1 (75-140)||(41195189-41195254)
chr1 (71-140)||(45205077-45205146)
chr1 (73-110)||(47917275-47917312)
chr1 (95-135)||(19092399-19092439)
chr1 (100-140)||(21254768-21254808)
chr1 (74-129)||(27145730-27145785)
chr1 (76-140)||(35017585-35017649)
chr1 (71-140)||(35350645-35350718)
[»] chr8 (52 HSPs)
chr8 (75-160)||(20672739-20672824)
chr8 (72-160)||(33553229-33553317)
chr8 (81-142)||(42215084-42215145)
chr8 (71-142)||(30191133-30191204)
chr8 (98-147)||(11494148-11494197)
chr8 (71-118)||(13000416-13000463)
chr8 (72-139)||(21653091-21653158)
chr8 (71-117)||(2594989-2595035)
chr8 (94-140)||(4762518-4762564)
chr8 (81-142)||(11493972-11494033)
chr8 (75-140)||(11569453-11569518)
chr8 (73-141)||(25869260-25869328)
chr8 (71-135)||(39866726-39866790)
chr8 (73-160)||(14949855-14949942)
chr8 (97-140)||(27028840-27028883)
chr8 (78-117)||(30389131-30389170)
chr8 (79-142)||(33714236-33714299)
chr8 (73-140)||(38421273-38421340)
chr8 (105-160)||(40280253-40280308)
chr8 (75-118)||(41606899-41606942)
chr8 (75-142)||(42215302-42215369)
chr8 (76-122)||(3600735-3600781)
chr8 (76-122)||(14339602-14339648)
chr8 (71-140)||(779053-779122)
chr8 (71-116)||(4281579-4281624)
chr8 (71-140)||(30918122-30918190)
chr8 (71-115)||(32840977-32841022)
chr8 (71-140)||(41620283-41620352)
chr8 (91-140)||(44236835-44236884)
chr8 (76-140)||(2235653-2235717)
chr8 (84-140)||(9956819-9956875)
chr8 (71-139)||(12224891-12224959)
chr8 (76-140)||(27754413-27754477)
chr8 (75-142)||(9540992-9541059)
chr8 (79-142)||(10075551-10075614)
chr8 (75-146)||(12851179-12851250)
chr8 (77-140)||(28769337-28769400)
chr8 (76-142)||(28784793-28784858)
chr8 (78-140)||(29059795-29059857)
chr8 (76-140)||(1930044-1930109)
chr8 (73-118)||(3161617-3161662)
chr8 (75-140)||(5069706-5069771)
chr8 (71-140)||(7918438-7918507)
chr8 (95-140)||(7918789-7918834)
chr8 (75-140)||(37353245-37353310)
chr8 (71-140)||(39551201-39551270)
chr8 (71-140)||(43504760-43504829)
chr8 (76-124)||(11000573-11000621)
chr8 (75-139)||(11795102-11795166)
chr8 (75-143)||(31168020-31168088)
chr8 (72-140)||(31862502-31862570)
chr8 (77-137)||(42370359-42370419)
[»] chr7 (50 HSPs)
chr7 (71-160)||(7244669-7244758)
chr7 (75-158)||(22551401-22551484)
chr7 (71-140)||(12110369-12110438)
chr7 (76-149)||(48917341-48917416)
chr7 (95-142)||(12792579-12792626)
chr7 (63-140)||(529384-529461)
chr7 (73-159)||(34035907-34035994)
chr7 (71-140)||(46825107-46825178)
chr7 (91-140)||(25596042-25596091)
chr7 (75-147)||(6552288-6552360)
chr7 (75-160)||(43250695-43250782)
chr7 (76-140)||(44151477-44151541)
chr7 (73-135)||(21247939-21248002)
chr7 (71-118)||(46082067-46082114)
chr7 (71-118)||(47134749-47134796)
chr7 (74-140)||(4966165-4966231)
chr7 (71-117)||(11048059-11048105)
chr7 (71-129)||(25670578-25670636)
chr7 (71-140)||(9423586-9423655)
chr7 (97-142)||(12792642-12792687)
chr7 (79-140)||(24363601-24363662)
chr7 (76-136)||(29286804-29286864)
chr7 (71-143)||(30316968-30317040)
chr7 (95-142)||(12792514-12792561)
chr7 (71-110)||(20888386-20888425)
chr7 (75-134)||(35267377-35267436)
chr7 (73-124)||(44808183-44808234)
chr7 (97-160)||(5017958-5018023)
chr7 (71-113)||(36537944-36537986)
chr7 (81-160)||(42656482-42656563)
chr7 (75-117)||(43219640-43219682)
chr7 (75-140)||(9038121-9038185)
chr7 (71-116)||(15740403-15740448)
chr7 (95-140)||(18962588-18962633)
chr7 (95-140)||(18965726-18965771)
chr7 (91-140)||(27378840-27378889)
chr7 (71-140)||(33645953-33646021)
chr7 (71-140)||(45859519-45859587)
chr7 (95-140)||(46104583-46104628)
chr7 (79-140)||(47559601-47559662)
chr7 (99-160)||(3836702-3836765)
chr7 (71-115)||(6226148-6226192)
chr7 (82-142)||(7623145-7623205)
chr7 (71-115)||(9872906-9872950)
chr7 (417-453)||(25442323-25442359)
chr7 (91-159)||(33601127-33601195)
chr7 (76-135)||(33871265-33871322)
chr7 (81-113)||(35007633-35007665)
chr7 (76-140)||(39345480-39345544)
chr7 (71-111)||(39539773-39539813)
[»] chr6 (49 HSPs)
chr6 (75-140)||(33887839-33887904)
chr6 (71-143)||(4420649-4420721)
chr6 (75-140)||(6647396-6647461)
chr6 (73-124)||(6536972-6537023)
chr6 (73-123)||(9027604-9027654)
chr6 (75-133)||(13908479-13908537)
chr6 (78-160)||(31583668-31583750)
chr6 (71-140)||(2112209-2112278)
chr6 (99-160)||(2205610-2205671)
chr6 (71-140)||(3528812-3528881)
chr6 (71-140)||(30863255-30863324)
chr6 (96-147)||(26694880-26694931)
chr6 (95-140)||(835265-835310)
chr6 (75-140)||(5564124-5564189)
chr6 (71-140)||(7931718-7931787)
chr6 (71-140)||(10616533-10616602)
chr6 (71-140)||(20368172-20368241)
chr6 (95-140)||(27894055-27894100)
chr6 (75-140)||(31624099-31624164)
chr6 (75-140)||(32386559-32386624)
chr6 (71-140)||(34403864-34403933)
chr6 (71-136)||(34939526-34939591)
chr6 (71-143)||(2455816-2455888)
chr6 (81-141)||(17241254-17241314)
chr6 (76-140)||(19275633-19275697)
chr6 (92-140)||(20370892-20370940)
chr6 (91-139)||(20512656-20512704)
chr6 (71-143)||(29837077-29837148)
chr6 (71-115)||(33832265-33832309)
chr6 (76-115)||(821833-821872)
chr6 (73-140)||(8364970-8365037)
chr6 (71-118)||(31420976-31421023)
chr6 (75-138)||(34939755-34939818)
chr6 (72-138)||(281841-281907)
chr6 (75-117)||(696634-696676)
chr6 (72-157)||(10031723-10031809)
chr6 (76-118)||(29296292-29296334)
chr6 (102-140)||(31812036-31812074)
chr6 (73-110)||(733171-733208)
chr6 (95-140)||(1497990-1498035)
chr6 (71-116)||(1575928-1575973)
chr6 (95-140)||(13907856-13907901)
chr6 (77-118)||(27909636-27909677)
chr6 (97-142)||(32387073-32387118)
chr6 (75-140)||(33089515-33089580)
chr6 (75-131)||(7785740-7785796)
chr6 (75-143)||(11600870-11600938)
chr6 (84-140)||(13907594-13907650)
chr6 (71-135)||(32577978-32578042)
[»] chr3 (76 HSPs)
chr3 (75-130)||(36139897-36139952)
chr3 (75-130)||(36101587-36101642)
chr3 (73-140)||(36887513-36887580)
chr3 (75-140)||(21367676-21367742)
chr3 (95-160)||(16790394-16790459)
chr3 (71-140)||(37273143-37273212)
chr3 (75-135)||(23808060-23808120)
chr3 (75-143)||(54837030-54837098)
chr3 (77-140)||(20669181-20669244)
chr3 (77-136)||(33883748-33883807)
chr3 (71-134)||(42745053-42745116)
chr3 (75-142)||(52440658-52440725)
chr3 (70-140)||(39602201-39602271)
chr3 (78-140)||(40665438-40665500)
chr3 (75-140)||(24785214-24785279)
chr3 (71-140)||(30573906-30573975)
chr3 (93-142)||(34924552-34924601)
chr3 (71-140)||(52619012-52619081)
chr3 (71-135)||(36200110-36200174)
chr3 (75-143)||(45541577-45541645)
chr3 (71-118)||(3044251-3044298)
chr3 (76-147)||(45432936-45433007)
chr3 (81-140)||(53736122-53736181)
chr3 (97-143)||(2825153-2825199)
chr3 (94-140)||(20502083-20502129)
chr3 (76-141)||(36878753-36878819)
chr3 (91-140)||(2719477-2719526)
chr3 (75-140)||(8933796-8933861)
chr3 (73-118)||(25925773-25925818)
chr3 (76-140)||(35394494-35394559)
chr3 (75-160)||(37825111-37825196)
chr3 (74-131)||(47249481-47249538)
chr3 (71-132)||(47513670-47513731)
chr3 (71-140)||(50600170-50600239)
chr3 (91-159)||(12985357-12985425)
chr3 (91-139)||(13371127-13371175)
chr3 (84-140)||(26320107-26320163)
chr3 (91-151)||(26478943-26479003)
chr3 (71-135)||(29771852-29771916)
chr3 (77-140)||(33965486-33965550)
chr3 (71-111)||(41724250-41724290)
chr3 (73-140)||(1816592-1816659)
chr3 (100-159)||(13413920-13413979)
chr3 (83-142)||(25453863-25453922)
chr3 (91-142)||(34414796-34414847)
chr3 (75-118)||(36445856-36445899)
chr3 (71-118)||(43115087-43115134)
chr3 (77-140)||(51130759-51130822)
chr3 (75-117)||(5391911-5391953)
chr3 (75-117)||(5396229-5396271)
chr3 (75-117)||(39723236-39723278)
chr3 (94-140)||(41633369-41633415)
chr3 (166-212)||(49465780-49465826)
chr3 (75-140)||(1217796-1217861)
chr3 (102-143)||(14145918-14145959)
chr3 (91-140)||(20170720-20170769)
chr3 (71-140)||(21574499-21574568)
chr3 (91-140)||(34382951-34383000)
chr3 (75-139)||(34610801-34610866)
chr3 (77-118)||(34954113-34954154)
chr3 (78-139)||(41671320-41671381)
chr3 (91-160)||(46407906-46407975)
chr3 (75-140)||(54180776-54180841)
chr3 (71-139)||(482784-482852)
chr3 (96-140)||(2071065-2071109)
chr3 (76-140)||(2128255-2128319)
chr3 (77-129)||(5166343-5166395)
chr3 (77-121)||(11040612-11040656)
chr3 (76-124)||(20195030-20195077)
chr3 (81-137)||(21862177-21862233)
chr3 (91-139)||(23793594-23793642)
chr3 (84-140)||(25447250-25447305)
chr3 (73-140)||(33405160-33405228)
chr3 (95-143)||(37138296-37138344)
chr3 (72-140)||(48048975-48049043)
chr3 (75-135)||(50952347-50952407)
[»] chr4 (55 HSPs)
chr4 (77-147)||(28300297-28300367)
chr4 (75-140)||(23819098-23819163)
chr4 (96-140)||(47800632-47800676)
chr4 (71-140)||(2996582-2996651)
chr4 (71-140)||(4471177-4471246)
chr4 (83-140)||(17884077-17884134)
chr4 (75-160)||(21043231-21043316)
chr4 (75-140)||(29263379-29263444)
chr4 (83-140)||(47145971-47146028)
chr4 (75-140)||(52746836-52746901)
chr4 (91-140)||(53673670-53673719)
chr4 (96-159)||(4500836-4500899)
chr4 (73-140)||(46019623-46019690)
chr4 (95-142)||(51630118-51630165)
chr4 (78-140)||(7694009-7694071)
chr4 (78-120)||(24747348-24747390)
chr4 (79-140)||(4798566-4798627)
chr4 (96-149)||(18011871-18011924)
chr4 (91-140)||(18628555-18628604)
chr4 (75-160)||(35743271-35743356)
chr4 (71-140)||(40532586-40532655)
chr4 (91-160)||(5131262-5131335)
chr4 (75-139)||(44249295-44249359)
chr4 (75-118)||(1137743-1137786)
chr4 (76-115)||(8469374-8469413)
chr4 (91-158)||(25548140-25548207)
chr4 (75-140)||(42641635-42641702)
chr4 (75-118)||(43824314-43824357)
chr4 (71-110)||(46401303-46401342)
chr4 (81-140)||(55084483-55084542)
chr4 (74-140)||(825485-825551)
chr4 (102-140)||(2111073-2111111)
chr4 (71-117)||(4691880-4691926)
chr4 (102-140)||(29778804-29778842)
chr4 (98-140)||(30631248-30631290)
chr4 (71-147)||(53155265-53155338)
chr4 (95-140)||(3155612-3155657)
chr4 (95-136)||(14011247-14011288)
chr4 (97-134)||(30377433-30377470)
chr4 (95-140)||(35290203-35290248)
chr4 (77-118)||(42461282-42461323)
chr4 (78-147)||(43932437-43932506)
chr4 (73-110)||(46201387-46201424)
chr4 (71-140)||(46415784-46415853)
chr4 (93-138)||(47118979-47119024)
chr4 (91-140)||(49219148-49219197)
chr4 (75-140)||(52735131-52735195)
chr4 (71-139)||(488118-488186)
chr4 (91-135)||(2592321-2592365)
chr4 (71-139)||(2874616-2874684)
chr4 (95-135)||(17751160-17751200)
chr4 (72-140)||(19250555-19250623)
chr4 (76-116)||(48719388-48719428)
chr4 (71-118)||(50569321-50569369)
chr4 (91-135)||(53792585-53792629)
[»] chr5 (56 HSPs)
chr5 (75-140)||(17258879-17258944)
chr5 (76-140)||(11707064-11707128)
chr5 (73-160)||(12242704-12242791)
chr5 (71-146)||(37611207-37611282)
chr5 (71-146)||(37787937-37788012)
chr5 (71-148)||(10125710-10125787)
chr5 (75-140)||(13604845-13604910)
chr5 (75-140)||(36639531-36639596)
chr5 (71-138)||(12459993-12460060)
chr5 (71-140)||(7674657-7674726)
chr5 (71-140)||(10272423-10272492)
chr5 (71-140)||(17368685-17368754)
chr5 (407-479)||(500368-500440)
chr5 (84-140)||(4014429-4014485)
chr5 (75-135)||(12521542-12521602)
chr5 (75-147)||(32408588-32408660)
chr5 (76-140)||(33533536-33533600)
chr5 (71-118)||(12467164-12467211)
chr5 (73-140)||(25461310-25461377)
chr5 (73-160)||(985600-985689)
chr5 (75-140)||(9202743-9202809)
chr5 (75-116)||(499727-499768)
chr5 (71-140)||(2092537-2092606)
chr5 (75-140)||(2568667-2568732)
chr5 (91-140)||(7319020-7319069)
chr5 (71-128)||(8089957-8090014)
chr5 (75-140)||(18543193-18543257)
chr5 (91-140)||(18906351-18906400)
chr5 (75-140)||(21768193-21768258)
chr5 (75-140)||(26209409-26209474)
chr5 (75-140)||(41957447-41957512)
chr5 (76-140)||(5284445-5284509)
chr5 (84-140)||(7984978-7985034)
chr5 (91-139)||(38104869-38104917)
chr5 (90-138)||(38829647-38829695)
chr5 (86-140)||(3237102-3237156)
chr5 (86-140)||(7907890-7907944)
chr5 (75-137)||(32545046-32545108)
chr5 (75-140)||(39105473-39105539)
chr5 (75-116)||(1899187-1899228)
chr5 (71-116)||(11700370-11700415)
chr5 (91-140)||(12425580-12425629)
chr5 (71-140)||(32172662-32172731)
chr5 (73-134)||(32194073-32194134)
chr5 (71-140)||(32897466-32897535)
chr5 (77-118)||(35963272-35963313)
chr5 (75-160)||(36774703-36774788)
chr5 (91-140)||(39594816-39594865)
chr5 (91-135)||(1465032-1465076)
chr5 (75-131)||(8177528-8177584)
chr5 (78-118)||(10303827-10303867)
chr5 (75-147)||(13264101-13264172)
chr5 (98-142)||(18637039-18637083)
chr5 (98-142)||(19460405-19460449)
chr5 (91-139)||(20028502-20028550)
chr5 (95-160)||(29116966-29117033)
[»] scaffold0147 (2 HSPs)
scaffold0147 (71-135)||(4927-4991)
scaffold0147 (71-133)||(12696-12758)
[»] scaffold0089 (1 HSPs)
scaffold0089 (91-139)||(33639-33687)
[»] scaffold0311 (1 HSPs)
scaffold0311 (71-126)||(10609-10664)
[»] scaffold0011 (1 HSPs)
scaffold0011 (93-145)||(14614-14666)


Alignment Details
Target: chr2 (Bit Score: 87; Significance: 2e-41; HSPs: 76)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 230 - 480
Target Start/End: Complemental strand, 35106281 - 35106033
Alignment:
Q  230 ttgtttataattattcttattattgttgttgcattttcaatttgcatcatagataagttgctctcattaaggtcctttctcctgcaaccgtttcttgcac 329  Q
    ||||||||||||||||||||| |||||||||||||||  ||||| |||||||||| ||| |||||||  || |||| |||||| |||||| ||| ||| |    
T  35106281 ttgtttataattattcttattgttgttgttgcatttttcatttgtatcatagatacgttactctcatggagttcctatctcctacaaccggttcgtgc-c 35106183  T
Q  330 actgtttagtcgtttgccgttttccaatttgaggcaaggagccgaagcttccaattcttccatggactccaatagcttccaaagctgtagatacgatgtg 429  Q
    | ||||   | ||||||| ||||| |||||||| |||||||| ||||||||||||||||||||||| |  |||| |   ||||||| ||||||||| |||    
T  35106182 a-tgttggattgtttgccattttcaaatttgagacaaggagctgaagcttccaattcttccatggattttaataacgatcaaagctatagatacgacgtg 35106084  T
Q  430 tttataagttttagaggtcctgacgttcgcaacacttttgttgatcatctt 480  Q
    ||||| ||||| |||||||| |||   |||||||||||||| |||||||||    
T  35106083 tttatcagtttcagaggtccagacacgcgcaacacttttgtcgatcatctt 35106033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 229 - 323
Target Start/End: Complemental strand, 35055363 - 35055269
Alignment:
Q  229 tttgtttataattattcttattattgttgttgcattttcaatttgcatcatagataagttgctctcattaaggtcctttctcctgcaaccgtttc 323  Q
    |||||| ||||||||||||||| ||||||||| |||||||| ||| |||||||||| ||| |||||||| | ||||||||||||||||| |||||    
T  35055363 tttgttaataattattcttatttttgttgttgaattttcaagttgtatcatagatatgttactctcattgaagtcctttctcctgcaacggtttc 35055269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 35379015 - 35379077
Alignment:
Q  78 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||| |||||| |||||||||||||||||||||||||||| || ||||||||||||||||||    
T  35379015 atgacttgttcataagttgttttcagcttattttcataagctctccaagatagcttatgaaaa 35379077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 44443394 - 44443328
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    |||||| ||||||| ||||||||||||||||||||||||| || ||  |||||||||||||||||||    
T  44443394 ttatgaaatgttcataagttgttttcagcttattttcatatgctctcaaagatagcttatgaaaata 44443328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 14666626 - 14666557
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||||| | |||||||||| ||||||||||||||||   ||||||||||| ||||||    
T  14666626 acaacttatgacatgttcataggttgttttcaccttattttcataagcataccaagatagcttgtgaaaa 14666557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 34652028 - 34652097
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||| || ||| |||||||| ||||||| ||||||| || ||||||||||||||||||    
T  34652028 acaacttatgacatgtccataagctgttttcaacttatttccataagctctccaagatagcttatgaaaa 34652097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 136
Target Start/End: Original strand, 43199776 - 43199841
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatg 136  Q
    ||||||| ||||||||| | ||||||||||||||||| |||||||||| || ||||||||||||||    
T  43199776 acaacttgtgacatgtttataagttgttttcagcttaatttcataagccctccaagatagcttatg 43199841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 142
Target Start/End: Complemental strand, 680577 - 680510
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    ||||||||||||| | ||  ||||||||||||||||||| |||  |||||||||||||||||||||||    
T  680577 cttatgacatgtttataaactgttttcagcttattttcacaagttcttcaagatagcttatgaaaata 680510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 12313169 - 12313240
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattt 146  Q
    |||||| |||||||| |||||| ||||| ||||||||||||||| || |||||||||||||| ||| |||||    
T  12313169 cttatgccatgttcataagttgatttcaccttattttcataagctctccaagatagcttatgtaaacaattt 12313240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 43910993 - 43911060
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||| ||||||||||||||||||| ||| ||||  | ||||||||||| ||||||    
T  43910993 aacttatgacatgttcataagttgttttcagcttattatcacaagctttccaagatagcttttgaaaa 43911060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 140
Target Start/End: Original strand, 43985021 - 43985064
Alignment:
Q  97 ttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  43985021 ttttcagcttattttcataagctcttcaagatagcttatgaaaa 43985064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 9174894 - 9174824
Alignment:
Q  71 acaacttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||| ||||| ||| | |||||||||||||||||||||| ||  |||||||||||||||||    
T  9174894 acaacttatgacattgttcataagctattttcagcttattttcataagctctgtaagatagcttatgaaaa 9174824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 9595310 - 9595260
Alignment:
Q  97 ttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 147  Q
    ||||||||||||||||||||||| || ||||||| ||||||||||||||||    
T  9595310 ttttcagcttattttcataagcattttaagatagtttatgaaaataattta 9595260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 1056121 - 1056190
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||| || || || ||||| ||||||    
T  1056121 acaacttatgacatgttcattagttgttttcagcttgttttcataagctctacatgagagcttgtgaaaa 1056190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 3227698 - 3227763
Alignment:
Q  94 ttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttat 159  Q
    |||||||||||||||||||| || | || ||| |||||||||||||| ||||||||||| ||||||    
T  3227698 ttgttttcagcttattttcaaaatctctccaaaatagcttatgaaaacaatttaactttgttttat 3227763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 29316771 - 29316836
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||| ||||| |||||||||||||| ||||||  || |||||||||| |||||||    
T  29316771 cttatgacatgttcataagttcttttcagcttatttccataagttctccaagatagctgatgaaaa 29316836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 16867812 - 16867748
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||| |||| |||||||||||| ||||||| ||||||| || ||||||||||| ||||||    
T  16867812 ttatgacatattcataagttgttttcaacttatttccataagctctccaagatagcttgtgaaaa 16867748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 480
Target Start/End: Complemental strand, 35184078 - 35183982
Alignment:
Q  384 ttcttccatggactccaatagcttccaaagctgtagatacgatgtgtttataagttttagaggtcctgacgttcgcaacacttttgttgatcatctt 480  Q
    ||||||||  || ||||||||| ||||||||| |||||| ||||||||||| |||||  | ||| |||||   |||| |||||||||||||||||||    
T  35184078 ttcttccagtgattccaatagcatccaaagctatagatatgatgtgtttatcagtttccgtggtgctgacacccgcagcacttttgttgatcatctt 35183982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 146
Target Start/End: Complemental strand, 15120261 - 15120186
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattt 146  Q
    |||||||||||||||||||  || |||||| |||||||||| |||||| || || ||||||||| ||||| |||||    
T  15120261 acaacttatgacatgttcattagctgttttaagcttattttgataagctctccatgatagcttacgaaaacaattt 15120186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 41809237 - 41809284
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    ||||||||||||||||||| |||||||||| ||||||||| |||||||    
T  41809237 acaacttatgacatgttcataagttgtttttagcttatttccataagc 41809284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 75 - 142
Target Start/End: Complemental strand, 41817242 - 41817175
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    ||||||||||||| | || ||||||||||||||||| ||||||| || || ||||| |||||||||||    
T  41817242 cttatgacatgttgataatttgttttcagcttatttccataagctctccaggatagtttatgaaaata 41817175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 26143631 - 26143701
Alignment:
Q  71 acaacttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||| ||| ||||||| ||| |||||||||||||||||||||  || |||| |||||||||||||    
T  26143631 acaacttatgtcattgttcacaggttattttcagcttattttcataagttctccaagttagcttatgaaaa 26143701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 33942229 - 33942159
Alignment:
Q  70 gacaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||| ||| ||  | ||| |||||||||||    
T  33942229 gacaacttatgacatgttcataagctgttttcagctaattttcattagctctctatgatggcttatgaaaa 33942159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 38078413 - 38078471
Alignment:
Q  82 catgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||| |||||||||| |||| |||| ||||||| || ||||||||||||||||||    
T  38078413 catgttcataagttgttttgagctcatttacataagctctccaagatagcttatgaaaa 38078471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 44606102 - 44606148
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataag 117  Q
    |||||||||||||||| || ||||||||||||||| |||||||||||    
T  44606102 acaacttatgacatgtccataagttgttttcagctgattttcataag 44606148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 1939324 - 1939393
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||| || ||| |||||||| ||||||| ||||||| || ||  ||||||||||||||    
T  1939324 acaacttatgacatgtccataagctgttttcaacttatttccataagctctccagtatagcttatgaaaa 1939393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 3067396 - 3067449
Alignment:
Q  96 gttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaac 149  Q
    ||||| ||||||||||||||| | ||||||||||||||||||||| | ||||||    
T  3067396 gtttttagcttattttcataaactcttcaagatagcttatgaaaacagtttaac 3067449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 7871717 - 7871652
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||| ||| ||| ||| |||||||||||||||| ||||||| |||||| | ||||||||||||    
T  7871717 cttatgatatgatcataaggtgttttcagcttatttccataagctcttcaaaagagcttatgaaaa 7871652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 8017508 - 8017443
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||| ||||||| || |||||||| || ||||||||||||  || ||||||||||||||||||    
T  8017508 cttatgatatgttcataatttgttttctgcgtattttcataagttctccaagatagcttatgaaaa 8017443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 9530726 - 9530791
Alignment:
Q  77 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    |||||||||| || ||||| |||| |||||| |||||||||| || || |||||||||||||||||    
T  9530726 tatgacatgtccataagttatttttagcttactttcataagctctccaggatagcttatgaaaata 9530791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 32821887 - 32821818
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||| || ||| ||||||||| ||||||  |||||| ||| | |||||||||||||||    
T  32821887 acaacttatgacatgtccataagctgttttcagtttatttctataagctctttaggatagcttatgaaaa 32821818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 33941987 - 33941918
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||| ||||| ||| || ||||| |||||| |||||| | || ||||||||||||||||||    
T  33941987 acaacttatgacaagttcataagctgctttcaacttattatcataaactctccaagatagcttatgaaaa 33941918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 43065442 - 43065511
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||| || || |||||||||||||||||  |||||| || || |||| ||||||||||    
T  43065442 acaacttatgacatgtccataaattgttttcagcttatttcaataagctctccacgataacttatgaaaa 43065511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 43141949 - 43141880
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||  || ||||||||||||  |||||| ||||| | ||||| |||||||||||||||    
T  43141949 acaacttatgacatgcccataagttgttttcattttatttccataaactcttcaggatagcttatgaaaa 43141880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 656789 - 656837
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 139  Q
    |||| ||||||| ||||||||||||||| || |||||||||||||||||    
T  656789 aagtagttttcatcttattttcataagctctgcaagatagcttatgaaa 656837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 1893275 - 1893335
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctt 133  Q
    |||||||||||||| || ||||| ||||||||||||||||| |||  || |||||||||||    
T  1893275 aacttatgacatgtacataagttattttcagcttattttcacaagttctccaagatagctt 1893335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 12147544 - 12147488
Alignment:
Q  62 ttattttggacaacttatgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    |||||| ||| | ||||||||||||||| || |||||||||| ||||||||||||||    
T  12147544 ttatttgggatagcttatgacatgttcataaattgttttcagtttattttcataagc 12147488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 142
Target Start/End: Original strand, 12464480 - 12464536
Alignment:
Q  86 ttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    |||||||| | ||||||||||||||||| |||  || ||||||||||||||||||||    
T  12464480 ttcacaagcttttttcagcttattttcacaagttctccaagatagcttatgaaaata 12464536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 35178044 - 35177984
Alignment:
Q  420 atacgatgtgtttataagttttagaggtcctgacgttcgcaacacttttgttgatcatctt 480  Q
    |||||| |||||||| ||||| |||||||| |||   ||||||||||||||||||||||||    
T  35178044 atacgacgtgtttatcagtttcagaggtccagacacccgcaacacttttgttgatcatctt 35177984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 35485994 - 35485926
Alignment:
Q  72 caacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||| ||||||| ||| ||||||||||| |||| |||| || ||||| |||||||||| ||||    
T  35485994 caacttatgatatgttcataagctgttttcagctcatttccataggctcttcaggatagcttataaaaa 35485926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 140
Target Start/End: Complemental strand, 1810716 - 1810673
Alignment:
Q  97 ttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||||||| | |||||||||||||||| ||||    
T  1810716 ttttcagcttattttcataaactcttcaagatagcttataaaaa 1810673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 7928304 - 7928351
Alignment:
Q  84 tgttcacaagttgttttcagcttattttcataagcacttcaagatagc 131  Q
    |||||| |||||||||||||||||||||||||||  || |||||||||    
T  7928304 tgttcataagttgttttcagcttattttcataagttctccaagatagc 7928351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 118
Target Start/End: Original strand, 8820292 - 8820331
Alignment:
Q  79 tgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  8820292 tgacatgttcacaagctgttttcagcttatttccataagc 8820331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 10563556 - 10563619
Alignment:
Q  77 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||| || ||| | |||||||||||||||| ||||| |||||  ||||||||||||||    
T  10563556 tatgacatgtccataagctattttcagcttattttcttaagctcttcagcatagcttatgaaaa 10563619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 12464722 - 12464679
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagctta 134  Q
    |||||||| ||||||||||||||||||  |||||||||||||||    
T  12464722 aagttgttctcagcttattttcataagttcttcaagatagctta 12464679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 110
Target Start/End: Original strand, 30538165 - 30538204
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattt 110  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  30538165 acaacttatgacatgtccataagttgttttcagcttattt 30538204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 147
Target Start/End: Original strand, 36863650 - 36863693
Alignment:
Q  104 cttattttcataagcacttcaagatagcttatgaaaataattta 147  Q
    ||||||||||||||| || |||||||||||||||||| ||||||    
T  36863650 cttattttcataagctctccaagatagcttatgaaaacaattta 36863693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 142
Target Start/End: Complemental strand, 42420071 - 42420004
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    |||||| |||||||| || |||||||||||| |||| |||||||  | || |||||||||||||||||    
T  42420071 cttatgtcatgttcataaattgttttcagctcatttccataagctatccaggatagcttatgaaaata 42420004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 1625975 - 1625909
Alignment:
Q  75 cttatgaca-tgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||| |||||| ||| ||||||||||| |||||| ||||  || ||||||||||||||||||    
T  1625975 cttatgacaatgttcataagatgttttcagctgattttcgtaagttctccaagatagcttatgaaaa 1625909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 157
Target Start/End: Complemental strand, 7283074 - 7282988
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttatttt 157  Q
    ||||||||||| |||| || |||||||||||| ||||| | ||||||| || | | |||||||||||||| | ||| |||| |||||    
T  7283074 acaacttatgatatgtccataagttgttttcatcttatatccataagctctcccacatagcttatgaaaacagtttgacttcatttt 7282988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 118
Target Start/End: Complemental strand, 11063561 - 11063519
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    ||||||||||| || |||||||||| |||||||||||||||||    
T  11063561 ttatgacatgtccataagttgtttttagcttattttcataagc 11063519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 15978040 - 15977994
Alignment:
Q  94 ttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||||||||| | || ||| ||||||||||||||    
T  15978040 ttgttttcagcttattttcataatctctccaaaatagcttatgaaaa 15977994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 26626948 - 26626882
Alignment:
Q  75 cttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||| ||||| ||  ||||||||| |||||||||||||  || ||||||||||||||||||    
T  26626948 cttatgacattgttcataatctgttttcaggttattttcataagttctgcaagatagcttatgaaaa 26626882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 35378531 - 35378593
Alignment:
Q  78 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||| |||||| ||||| ||||||||||||||||||||||  | |||||| ||||| |||||    
T  35378531 atgacttgttcataagttattttcagcttattttcataagctatccaagattgcttacgaaaa 35378593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 35993377 - 35993451
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaact 150  Q
    ||||||| ||| || || ||||||||||||||||||||||||  ||  | ||||||||||| ||| |||||||||    
T  35993377 ttatgacgtgtccataaattgttttcagcttattttcataagttctctatgatagcttatgcaaacaatttaact 35993451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 40682390 - 40682455
Alignment:
Q  75 cttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||  | |||||||| ||||||||||    
T  40682390 cttatgacattgttcataagttgttttcaacttattttcataagttc-tcaagatatcttatgaaaa 40682455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 157
Target Start/End: Complemental strand, 41144284 - 41144202
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttatttt 157  Q
    ||||||||||||  | |||||||||| ||||||||| || || | || |||| ||||||||||||| |||||  |||||||||    
T  41144284 cttatgacatgtcaataagttgtttttagcttatttccagaaactctccaagttagcttatgaaaacaatttgtctttatttt 41144202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 44590089 - 44590043
Alignment:
Q  94 ttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||| ||| |||  |||||||||||||||||||||    
T  44590089 ttgttttcagcttattctcacaagttcttcaagatagcttatgaaaa 44590043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 1056371 - 1056416
Alignment:
Q  97 ttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    ||||||||||||||  |||| | |||||||||||||||||||||||    
T  1056371 ttttcagcttatttctataaactcttcaagatagcttatgaaaata 1056416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 8187445 - 8187514
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||| || ||| |||||||||||||| |||||| ||||| | || || | |||||||||||||    
T  8187445 acaacttatgaaattttcgcaagttgttttcaggttatttccataatctctccatggtagcttatgaaaa 8187514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 139
Target Start/End: Complemental strand, 11488353 - 11488287
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 139  Q
    |||||||||||  || ||| |||||||||||||||||||| ||||| | || || ||||||||||||||    
T  11488353 acaacttatga--tggtcataagttgttttcagcttatttgcataatctctccaggatagcttatgaaa 11488287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 142
Target Start/End: Complemental strand, 16398194 - 16398121
Alignment:
Q  70 gacaacttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    ||||||||||||||| | ||  ||| |||||||||||||||||||||||  || ||| ||| ||||||||||||    
T  16398194 gacaacttatgacattgctcgtaagctgttttcagcttattttcataagttctccaacataacttatgaaaata 16398121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 19333325 - 19333386
Alignment:
Q  79 tgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||| ||| |||| ||||||||||||||||||| || ||| |||| ||| |||||    
T  19333325 tgacatgttcataagctgttctcagcttattttcataagctctccaatatagtttaagaaaa 19333386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 30552635 - 30552712
Alignment:
Q  71 acaacttatgacatgttcacaagttg-ttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 147  Q
    ||||||||||||||||  | |||||| |||| ||||||||| ||||||| ||  | ||||| ||||||||||||||||    
T  30552635 acaacttatgacatgtcaataagttggtttttagcttatttccataagctctctaggatagtttatgaaaataattta 30552712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 32614940 - 32614985
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataa 116  Q
    ||||||||||||||||||| | ||||||||||| ||||| ||||||    
T  32614940 acaacttatgacatgttcatatgttgttttcagattattctcataa 32614985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 33256814 - 33256749
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||| ||  |||| |||||||||||||||| |  ||||| ||| |||||||||||    
T  33256814 cttatgacatgttcataaactgttctcagcttattttcatacggtcttcaggatggcttatgaaaa 33256749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 480
Target Start/End: Complemental strand, 35055173 - 35055120
Alignment:
Q  427 gtgtttataagttttagaggtcctgacgttcgcaacacttttgttgatcatctt 480  Q
    ||||| || ||||||||||||||||||  |||||| | ||||||||||||||||    
T  35055173 gtgttcatcagttttagaggtcctgacactcgcaatagttttgttgatcatctt 35055120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 36415666 - 36415734
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||| |||||| || |||||||||||| ||||||||| ||||  || || |||||||||||||||    
T  36415666 acaacttat-acatgtgcataagttgttttcatcttattttcgtaagttctacatgatagcttatgaaaa 36415734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 40158792 - 40158727
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||| | ||||||||||||||||| || ||||||| || ||  ||| ||||||||||    
T  40158792 cttatgacatgtttataagttgttttcagcttaattacataagctctccagaataacttatgaaaa 40158727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 42817368 - 42817437
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||| | |||||||  |||||||||| |||||| || ||||||| |||||  ||||||||||||||    
T  42817368 acaacttacggcatgttcttaagttgtttttagcttacttccataagctcttcagaatagcttatgaaaa 42817437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 44644328 - 44644287
Alignment:
Q  99 ttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||||||| ||||||||||| || ||||||    
T  44644328 ttcagcttattttcataagctcttcaagatagtttttgaaaa 44644287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 45314946 - 45314901
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataa 116  Q
    |||||||||||||| || | ||||||||||||| ||||||||||||    
T  45314946 acaacttatgacatatttataagttgttttcagtttattttcataa 45314901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 6772516 - 6772584
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 143  Q
    ||||||||||  ||| ||| | ||||||||||| |||||||||| || | ||||| |||||||||||||    
T  6772516 cttatgacataatcataagcttttttcagcttactttcataagctctcctagataccttatgaaaataa 6772584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 24097861 - 24097817
Alignment:
Q  96 gttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||||||||| || || |||| ||||||||||    
T  24097861 gttttcagcttattttcataagctctccaggataacttatgaaaa 24097817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 35169753 - 35169693
Alignment:
Q  420 atacgatgtgtttataagttttagaggtcctgacgttcgcaacacttttgttgatcatctt 480  Q
    ||||||||||||||| ||||| |||||  |||||   || |||||||||||||||||||||    
T  35169753 atacgatgtgtttatcagtttcagaggcgctgacacccgtaacacttttgttgatcatctt 35169693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 43635095 - 43635159
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatga 137  Q
    ||||||||||||||    ||| |||||| |||||||||||||||||  |||| ||||||||||||    
T  43635095 aacttatgacatgtctgtaagctgttttaagcttattttcataagcttttcatgatagcttatga 43635159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 3e-21; HSPs: 91)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 139
Target Start/End: Original strand, 37593676 - 37593744
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 139  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||| |||||| |||||||||||||    
T  37593676 acaacttatgacatgttcataagctgttttcagcttattttcataagctcttcaaaatagcttatgaaa 37593744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 34290310 - 34290245
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||| |||| |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  34290310 cttatgacatattcataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaa 34290245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 136
Target Start/End: Original strand, 46252674 - 46252739
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatg 136  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| || ||||||||||||||    
T  46252674 acaacttatgacatgttcataagttgttttcaggttattttcataagctctccaagatagcttatg 46252739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 10199404 - 10199469
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||  || ||||||||||||||    
T  10199404 cttatgacatgttcataagttgttttcagcttattttcataagctctctaaaatagcttatgaaaa 10199469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 7136994 - 7137059
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||| |||| ||||| |||||||||||||||||||||  || ||||||||||||||||||    
T  7136994 cttatgacatattcataagttattttcagcttattttcataagttctccaagatagcttatgaaaa 7137059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 25479654 - 25479590
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||  ||||||||||||||||||||||||||| ||  | |||||||||||||||    
T  25479654 ttatgacatgttcattagttgttttcagcttattttcataagctctctaggatagcttatgaaaa 25479590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 28689448 - 28689508
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 135  Q
    |||||||||||| || ||||||||||||||||||||||||||||  | |||||||||||||    
T  28689448 cttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttat 28689508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 142
Target Start/End: Complemental strand, 6292567 - 6292500
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| || ||| |||| ||| |||||||    
T  6292567 cttatgacatgttcataagctgttttcagcttattttcataagctctccaaaatagtttacgaaaata 6292500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 138
Target Start/End: Original strand, 31517732 - 31517799
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaa 138  Q
    |||||| |||||||||||| ||| |||||||||||||||||||||||| || ||||| || |||||||    
T  31517732 acaactcatgacatgttcataagctgttttcagcttattttcataagctctccaagacagattatgaa 31517799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 37842354 - 37842416
Alignment:
Q  78 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| |||  |||||||||||||||| |||||  |||||||||||||||||||||    
T  37842354 atgacatgttcataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaa 37842416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 8016333 - 8016276
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatag 130  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||| || ||||||||    
T  8016333 aacttatgacatgttcataacttgttttcagcttattttcctaagctctccaagatag 8016276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 10854807 - 10854742
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||||| |||||||||||||||||| |||||  |||| |||||  ||||||||    
T  10854807 cttatgacatgttcacaagctgttttcagcttattttcttaagctgttcaggatagtatatgaaaa 10854742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 14629964 - 14630029
Alignment:
Q  77 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    ||||| ||||||| |||||||||||||||||||| |||||   || ||||||||||||||||||||    
T  14629964 tatgatatgttcataagttgttttcagcttatttccataaagtctccaagatagcttatgaaaata 14630029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 26779937 - 26779986
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  26779937 aagttgttttcaacttattttcataagttcttcaagatagcttatgaaaa 26779986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 27140552 - 27140487
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| || |||||||||||||||||||| ||||||| || || |||||||||| ||||    
T  27140552 cttatgacatgtccataagttgttttcagcttatttgcataagctctccatgatagcttataaaaa 27140487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 43332538 - 43332493
Alignment:
Q  95 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||    
T  43332538 tgttttcagcttattttaataagctcttcaagatagcttatgaaaa 43332493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 4576878 - 4576814
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| | ||||||| |||||||||||||||||||   ||||| ||||||||||||||    
T  4576878 ttatgacatgtttataagttgtgttcagcttattttcataagttattcaatatagcttatgaaaa 4576814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 5886990 - 5887050
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 135  Q
    ||||||||||||||| |||||||||||||||||||||| ||||  || |||||| ||||||    
T  5886990 cttatgacatgttcataagttgttttcagcttattttcgtaagttctccaagatggcttat 5887050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 19389978 - 19389910
Alignment:
Q  73 aacttatgacatgttcacaagttgttttc-agcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||| ||||||| ||||||||||  |||||||||||| |||| || ||||||||||||||||||    
T  19389978 aacttatgatatgttcataagttgttttttagcttattttcacaagctctccaagatagcttatgaaaa 19389910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 26461955 - 26462011
Alignment:
Q  93 gttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaac 149  Q
    |||||||||||||||||||||||||| || || ||||||||||||| || |||||||    
T  26461955 gttgttttcagcttattttcataagctctgcaggatagcttatgaagatgatttaac 26462011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 15784406 - 15784343
Alignment:
Q  73 aacttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 135  Q
    |||||||||||| |||||||||||||||| |||||||||||| |||  || |||||||||||||    
T  15784406 aacttatgacattgttcacaagttgtttttagcttattttcacaagttctccaagatagcttat 15784343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 75 - 134
Target Start/End: Original strand, 38170686 - 38170745
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctta 134  Q
    ||||||||||||||| |||||||||||||||| ||||| ||||| ||||||  |||||||    
T  38170686 cttatgacatgttcataagttgttttcagcttgttttcctaagctcttcaaattagctta 38170745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 38867825 - 38867892
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||| |||| ||  ||||||||| ||||||||||||||||  |||||||||| ||||||||||    
T  38867825 aacttatgatatgtccatcagttgtttttagcttattttcataagttcttcaagataacttatgaaaa 38867892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 7218069 - 7218135
Alignment:
Q  74 acttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||| ||||||||| |||||||| ||||||||||||||  || || ||||| |||||||||    
T  7218069 acttatgacacgttcacaagctgttttcaacttattttcataagttctccaggataggttatgaaaa 7218135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 141
Target Start/End: Complemental strand, 15361106 - 15361048
Alignment:
Q  83 atgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaat 141  Q
    ||||||| |||||||||||||||||||||||||||| || || ||||||  ||||||||    
T  15361106 atgttcataagttgttttcagcttattttcataagctctccaggatagccaatgaaaat 15361048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 30815649 - 30815738
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagct-----tatgaaaataatttaactttattttatc 160  Q
    ||||||||||||||| ||  |||||||||||||||||||||||  |||||| | ||||     |||||||||| |||||||||||||||||    
T  30815649 cttatgacatgttcataaaatgttttcagcttattttcataagttcttcaaca-agctacttatatgaaaatagtttaactttattttatc 30815738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 42397803 - 42397749
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagctt-attttcataagcacttca 124  Q
    |||||||||| |||||||| |||||||||||||||| |||| |||||||||||||    
T  42397803 acaacttatggcatgttcataagttgttttcagcttaatttccataagcacttca 42397749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 118
Target Start/End: Complemental strand, 47877182 - 47877140
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    |||||||||| ||| ||||||||||||||||||||||||||||    
T  47877182 ttatgacatgctcataagttgttttcagcttattttcataagc 47877140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 5047200 - 5047155
Alignment:
Q  95 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||    
T  5047200 tgttttcagcttatttccataagctcttcatgatagcttatgaaaa 5047155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 7262518 - 7262579
Alignment:
Q  79 tgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||| ||| |||||||| ||||||| || |||| ||||| |||||||||||||||    
T  7262518 tgacatgttcataagctgttttcaccttatttccacaagctcttcaggatagcttatgaaaa 7262579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 7472365 - 7472324
Alignment:
Q  95 tgttttcagcttattttcataagcacttcaagatagcttatg 136  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  7472365 tgttttcagcttattttcataagctctccaagatagcttatg 7472324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 12564511 - 12564560
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||||||| ||||||  || ||||||||||||||||||    
T  12564511 aagttgttttcagcttatttccataagttctccaagatagcttatgaaaa 12564560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 23373305 - 23373393
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 160  Q
    |||||||||||||||| ||||  | |||||||||||||||   ||||| ||||| ||||||||||||||| |  || |||||||||||||    
T  23373305 acaacttatgacatgtccacatct-gttttcagcttatttctgtaagctcttcaggatagcttatgaaaacagattgactttattttatc 23373393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 31118117 - 31118052
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||  ||||||||||||||||||| ||||||  | ||| | |||||||||||||    
T  31118117 cttatgacatgttcatcagttgttttcagcttatttccataagttcatcagggtagcttatgaaaa 31118052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 48748601 - 48748682
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattt 156  Q
    |||||||||||| || ||||| | || ||||||||  ||||| |  | |||||||||||||||||| |||||||||||||||    
T  48748601 cttatgacatgtccataagttatgtttagcttattaccataaactgtccaagatagcttatgaaaacaatttaactttattt 48748682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 52190203 - 52190138
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||| || ||||||  ||||||||||||||||| ||||| || || |||||||||||||||    
T  52190203 cttatgacaagtccacaagccgttttcagcttattttcgtaagctctccatgatagcttatgaaaa 52190138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 1509959 - 1510027
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttc-aagatagcttatgaaaa 140  Q
    |||||||||||||||||  || ||||||||||||||||||||||  ||| | ||||||| |||||||||    
T  1509959 aacttatgacatgttcattagctgttttcagcttattttcataaatactcctaagataggttatgaaaa 1510027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 4699607 - 4699679
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 143  Q
    ||||||||||||||||||| ||| |||||| |||||||||  |||||| || |  ||||| ||||||||||||    
T  4699607 acaacttatgacatgttcataagctgtttttagcttatttctataagctctccgggatagtttatgaaaataa 4699679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 11893605 - 11893653
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 139  Q
    |||||||||||||||||||| ||||| | |||||| |||||||||||||    
T  11893605 aagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 11893653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 159
Target Start/End: Original strand, 29834897 - 29834985
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttat 159  Q
    |||||||| ||| ||| || ||| | ||||||  |||||| ||||||| || || ||||||||||||||| ||||| ||||||||||||    
T  29834897 acaacttacgacgtgtccataagcttttttcaatttatttccataagctctacatgatagcttatgaaaacaatttgactttattttat 29834985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 30257756 - 30257692
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||| ||| ||||||||||||||||  |||||| || || ||||| |||||||||    
T  30257756 ttatgacatgttcataagctgttttcagcttatttctataagccctccaggatagtttatgaaaa 30257692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 35707194 - 35707281
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctt--atgaaaataatttaactttattttatc 160  Q
    |||||||||||  ||||||||||||||||| ||||||||||||| || || |||| |||  ||||||| | ||| |||| ||||||||    
T  35707194 cttatgacatgcccacaagttgttttcagcatattttcataagctctacaggataacttacatgaaaacagtttgacttaattttatc 35707281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 38503470 - 38503518
Alignment:
Q  84 tgttcacaagttgttttcagcttattttcataagcacttcaagatagct 132  Q
    |||||| |||||||||||||||||||||||||||  || ||||||||||    
T  38503470 tgttcataagttgttttcagcttattttcataagttctccaagatagct 38503518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 110
Target Start/End: Complemental strand, 3223745 - 3223706
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattt 110  Q
    ||||||||||||||||| | ||||||||||||||||||||    
T  3223745 acaacttatgacatgtttataagttgttttcagcttattt 3223706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 3224498 - 3224455
Alignment:
Q  74 acttatgacatgttcacaagttgttttcagcttattttcataag 117  Q
    ||||||||||||| || |||||||| ||||||||||||||||||    
T  3224498 acttatgacatgtccataagttgttctcagcttattttcataag 3224455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 142
Target Start/End: Complemental strand, 4445782 - 4445715
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    ||||| ||||||||| ||| |||||||| |||||||||| |||| || ||||  ||||||||||||||    
T  4445782 cttataacatgttcagaagctgttttcaacttattttcacaagctctccaagtcagcttatgaaaata 4445715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 4920767 - 4920838
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 147  Q
    |||||||||||||  | |||||||| |||||||||||||||||   ||||||||| ||||| ||||| ||||    
T  4920767 ttatgacatgttcttaggttgtttttagcttattttcataagctactcaagataggttatggaaatagttta 4920838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 6279467 - 6279400
Alignment:
Q  81 acatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaa 148  Q
    |||||| || |||||||||||||| ||||| ||||||| ||  | ||||||||||||||||| |||||    
T  6279467 acatgtccataagttgttttcagcgtatttccataagctctctaggatagcttatgaaaatagtttaa 6279400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 142
Target Start/End: Complemental strand, 10280727 - 10280656
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    |||||||||  |||||||| ||| | || ||||||||||||||||||  ||| ||||||||||| |||||||    
T  10280727 acaacttatttcatgttcataagcttttgtcagcttattttcataagttcttgaagatagcttacgaaaata 10280656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 10809424 - 10809377
Alignment:
Q  70 gacaacttatgacatgttcacaagttgttttcagcttattttcataag 117  Q
    |||||||||||||||||| | ||  |||||||||||||||||||||||    
T  10809424 gacaacttatgacatgtttataatatgttttcagcttattttcataag 10809377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 35590905 - 35590952
Alignment:
Q  92 agttgttttcagcttattttcataagcacttcaagatagcttatgaaa 139  Q
    ||||||||||||||||||| ||||||| || || ||||||||||||||    
T  35590905 agttgttttcagcttatttccataagctctccatgatagcttatgaaa 35590952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 1565526 - 1565596
Alignment:
Q  70 gacaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||| |||||||||||| || ||| |||||||||||||||||||| ||| || ||| |||| ||| |||||    
T  1565526 gacagcttatgacatgtgcataagctgttttcagcttattttcatgagctctccaaaatagattaagaaaa 1565596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 133
Target Start/End: Complemental strand, 11129366 - 11129324
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagctt 133  Q
    ||||||||||||| ||||||||||||||| |||| ||||||||    
T  11129366 aagttgttttcagtttattttcataagcatttcaggatagctt 11129324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 12564877 - 12564935
Alignment:
Q  82 catgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||| || ||| |||||||||||||||| | ||||||||  |||||||||||||||||    
T  12564877 catgtccataagctgttttcagcttatttccgtaagcactaaaagatagcttatgaaaa 12564935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 29635425 - 29635383
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttca 113  Q
    |||| |||||||||||| | |||||||||||||||||||||||    
T  29635425 acaagttatgacatgtttataagttgttttcagcttattttca 29635383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 43338190 - 43338124
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaat 141  Q
    ||||||||||||||| ||  | |||||||| ||||||||||||| || || | ||||||||||||||    
T  43338190 cttatgacatgttcataatctattttcagcctattttcataagctctccatgttagcttatgaaaat 43338124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 43722322 - 43722384
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 135  Q
    ||||||||||||||||  | ||||||||||||||||||| |||||| ||  || |||||||||    
T  43722322 aacttatgacatgttcttatgttgttttcagcttatttttataagctctcaaatatagcttat 43722384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 140
Target Start/End: Complemental strand, 45975753 - 45975699
Alignment:
Q  86 ttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||| ||| ||||||||||||||||||||||   || ||||||||||||||||||    
T  45975753 ttcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaa 45975699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 51190900 - 51190862
Alignment:
Q  97 ttttcagcttattttcataagcacttcaagatagcttat 135  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  51190900 ttttcagcttattttcataagttcttcaagatagcttat 51190862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 51695486 - 51695556
Alignment:
Q  71 acaacttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||| |||| ||||| ||| | ||||||||||||||||||||   || ||||||||||||||||||    
T  51695486 acaacttatcacattgttcataagctattttcagcttattttcataaattctccaagatagcttatgaaaa 51695556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 3070082 - 3070174
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattt-tcataagcacttcaagatagcttatgaaaataat--ttaactttattttatc 160  Q
    ||||||||||||||||||| ||| ||||||||||||| || | |||||  || | | |||||||||||||| ||   ||||||||||||||||    
T  3070082 acaacttatgacatgttcataagctgttttcagcttaattattataagttctcccaaatagcttatgaaaacaacaattaactttattttatc 3070174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 3924702 - 3924633
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||| |||||| ||||| | ||||||||||| |||||||| ||||| | ||||| |||||||||| ||||    
T  3924702 acaatttatgaaatgtttataagttgttttcggcttatttccataaactcttcaggatagcttataaaaa 3924633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 4202147 - 4202212
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| || ||| | |||||||||||||||| ||||| || | ||||||||| ||||||    
T  4202147 cttatgacatgtccataagctattttcagcttattttcgtaagctctgccagatagcttttgaaaa 4202212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 4548779 - 4548730
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||| |||||||||||  |||| || ||||||||||||||||||    
T  4548779 aagttgtttttagcttattttctgaagctctccaagatagcttatgaaaa 4548730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 109
Target Start/End: Complemental strand, 4549921 - 4549888
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttatt 109  Q
    |||||||||||||| |||||||||||||||||||    
T  4549921 ttatgacatgttcataagttgttttcagcttatt 4549888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 4622167 - 4622106
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatg 136  Q
    |||||||||||| || ||| |||||| |||||||||||| |||| || ||||||||| ||||    
T  4622167 cttatgacatgtccataagctgtttttagcttattttcacaagctctccaagatagcatatg 4622106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 4700066 - 4700127
Alignment:
Q  79 tgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||| |  ||||||||||||||||||||||||||| || || ||||| |||| ||||    
T  4700066 tgacatgtttaggagttgttttcagcttattttcataagctctccaggatagtttataaaaa 4700127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 4868478 - 4868409
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||  | |||||||||||| ||||||| |||||||  ||||| |||| ||| |||||    
T  4868478 acaacttatgacatgtcaataagttgttttcaacttatttacataagcttttcaaaatagtttacgaaaa 4868409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 5276369 - 5276324
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    ||||||||||||||||| ||||||||||||  |||||||| |||||    
T  5276369 aacttatgacatgttcataagttgttttcaagttattttcttaagc 5276324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 12477283 - 12477348
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| || |||||||||||||||||||| ||||  | || || |||||||||| ||||    
T  12477283 cttatgacatgtccataagttgttttcagcttatttccatacactctccatgatagcttattaaaa 12477348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 12593449 - 12593514
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||| |||||| || ||||||||||||| ||  || ||||||| || ||||||||||||||||||    
T  12593449 cttataacatgtgcataagttgttttcaggtttattccataagcgctccaagatagcttatgaaaa 12593514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 15579560 - 15579515
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataa 116  Q
    |||||||||||||||| || |||||||| ||||||||||| |||||    
T  15579560 acaacttatgacatgtccataagttgttctcagcttatttccataa 15579515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 137
Target Start/End: Original strand, 16981933 - 16981994
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatga 137  Q
    ||||||||||| || |||||||||| |||||||||  |||||| || || ||||||||||||    
T  16981933 ttatgacatgtccataagttgtttttagcttatttatataagctctccatgatagcttatga 16981994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 24460403 - 24460468
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||| ||| ||||| |||||||||||  ||||| ||  | |||||||||||||||    
T  24460403 cttatgacatgttcataagctgtttccagcttatttttgtaagctctcaaggatagcttatgaaaa 24460468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 26185589 - 26185524
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagctta-ttttcataagcacttcaagatagcttat 135  Q
    |||||||||||||||| || |||||||||||| | || ||||| ||||| || |||||||||||||    
T  26185589 acaacttatgacatgtgcataagttgttttcaacatatttttcgtaagctctccaagatagcttat 26185524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 27963366 - 27963431
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| || |||||||||| |||||||||  |||||| || ||  ||||||||||||||    
T  27963366 cttatgacatgtccataagttgtttttagcttatttatataagctctccataatagcttatgaaaa 27963431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 28077073 - 28077130
Alignment:
Q  83 atgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||| ||||||||||||||||||||  |||||| ||  || ||||||||||||||    
T  28077073 atgttcataagttgttttcagcttatttcaataagctctctaaaatagcttatgaaaa 28077130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 28910064 - 28909999
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||| |||| | |||||||||||| |||||||||||||   ||||| | |||||||||||||    
T  28910064 cttatgacttgtttataagttgttttcatcttattttcataacttcttcatgctagcttatgaaaa 28909999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 133
Target Start/End: Original strand, 28935873 - 28935930
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctt 133  Q
    ||||||||||| || ||||| |||| ||||||||| ||||||| ||||| ||||||||    
T  28935873 ttatgacatgtccataagttttttttagcttatttccataagctcttcaggatagctt 28935930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 32182337 - 32182280
Alignment:
Q  83 atgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||| ||||| |||||||||||||| | ||||| ||||||||||| || ||||||    
T  32182337 atgttcataagtttttttcagcttatttccttaagctcttcaagatagattttgaaaa 32182280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 110
Target Start/End: Original strand, 34278687 - 34278724
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattt 110  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  34278687 aacttatgacatgttcataggttgttttcagcttattt 34278724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 35080061 - 35080130
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||||| ||| |||||| |||||||||  | |||| || || ||||||| |||||||    
T  35080061 acaacttatgacatgttcataagctgttttgagcttatttcgacaagctctccatgatagctcatgaaaa 35080130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 35925764 - 35925703
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatg 136  Q
    ||||||||||||||| ||| |||||||| ||||||| ||||| | || || |||||||||||    
T  35925764 cttatgacatgttcataagctgttttcaacttatttccataaactctccatgatagcttatg 35925703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 41195189 - 41195254
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||| || | ||| | |||||||||||||||||||||  || |||||||| |||||||||    
T  41195189 cttatgacattttaataagcttttttcagcttattttcataagttctccaagatagtttatgaaaa 41195254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 45205146 - 45205077
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||| |||| |  |||||||||||||||||||| ||| | | || || |||||||||||||||    
T  45205146 acaacttatgatatgtccctaagttgttttcagcttatttccatgaactctacatgatagcttatgaaaa 45205077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 110
Target Start/End: Complemental strand, 47917312 - 47917275
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattt 110  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  47917312 aacttatgacatgttcataagttgttttcaacttattt 47917275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 19092399 - 19092439
Alignment:
Q  95 tgttttcagcttattttcataagcacttcaagatagcttat 135  Q
    |||||||| ||||||||||||||| ||||| ||||||||||    
T  19092399 tgttttcaccttattttcataagctcttcaggatagcttat 19092439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 140
Target Start/End: Original strand, 21254768 - 21254808
Alignment:
Q  100 tcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||||| || |||||||||||| |||||    
T  21254768 tcagcttattttcataagctctccaagatagcttaagaaaa 21254808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 129
Target Start/End: Original strand, 27145730 - 27145785
Alignment:
Q  74 acttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagata 129  Q
    ||||||||||| ||||| ||||| |||||||||||||||||||||  ||||||||||    
T  27145730 acttatgacattgttcataagtt-ttttcagcttattttcataagttcttcaagata 27145785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 35017649 - 35017585
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||| || ||||| |||||| ||||||| ||||||| || || || ||||||||||||    
T  35017649 ttatgacatgtccataagttattttcaacttatttccataagctctccaggacagcttatgaaaa 35017585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 35350718 - 35350645
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagct----tattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||| || ||| |||||||||||    ||||| ||||||| ||| | |||||||||||||||    
T  35350718 acaacttatgacatgtccataagctgttttcagctagcttatttacataagctctttaggatagcttatgaaaa 35350645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 75 - 160
Target Start/End: Complemental strand, 20672824 - 20672739
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 160  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| || || |||||||||| |||| | ||| |||||||||||||    
T  20672824 cttatgacatgttcataagctgttttcagcttattttcataagctctccaggatagcttataaaaacagtttgactttattttatc 20672739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 72 - 160
Target Start/End: Complemental strand, 33553317 - 33553229
Alignment:
Q  72 caacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 160  Q
    ||||||||||||||| |  ||| ||||  |||||||||| ||||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  33553317 caacttatgacatgtccctaagctgttcccagcttatttccataagctcttcaagatagcttatgaaaacaatttgactttattttatc 33553229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 81 - 142
Target Start/End: Original strand, 42215084 - 42215145
Alignment:
Q  81 acatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    ||||||||| |||||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  42215084 acatgttcataagttgttttcagcttatttacataagctctccaagatagcttatgaaaata 42215145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 71 - 142
Target Start/End: Original strand, 30191133 - 30191204
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||| || |||| |||||||||| ||||||    
T  30191133 acaacttatgacatgttcaaaacttgttttcagcttatttccataaacatttcaggatagcttatcaaaata 30191204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 11494197 - 11494148
Alignment:
Q  98 tttcagcttattttcataagcacttcaagatagcttatgaaaataattta 147  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  11494197 tttcagcttattttcataagctcttcaagatagcttatgaaaatagttta 11494148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 13000416 - 13000463
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||    
T  13000416 acaacttatgacatgtccacaagttgttttcagcttatttccataagc 13000463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 21653158 - 21653091
Alignment:
Q  72 caacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 139  Q
    |||||||||||| ||||| ||| | |||||||||||||||||||||| || |||||||||| ||||||    
T  21653158 caacttatgacacgttcataagctattttcagcttattttcataagctctccaagatagctaatgaaa 21653091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 2594989 - 2595035
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataag 117  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||    
T  2594989 acaacttatgacatgttcataagttgttttcagcttattctcataag 2595035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 4762564 - 4762518
Alignment:
Q  94 ttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  4762564 ttgttttcagcttatttacataagctcttcaagatagcttatgaaaa 4762518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 11494033 - 11493972
Alignment:
Q  81 acatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    ||||||||| ||| ||| ||||||||| |||||||||| |||||||||||| ||||||||||    
T  11494033 acatgttcataagctgtgttcagcttactttcataagctcttcaagatagcgtatgaaaata 11493972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 11569453 - 11569518
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| || ||||||||||||||||||||||| || | || || |||||||||||||||    
T  11569453 cttatgacatgtacataagttgttttcagcttattttcaaaatctctccatgatagcttatgaaaa 11569518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 141
Target Start/End: Original strand, 25869260 - 25869328
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaat 141  Q
    |||||||||||||| || |||||||||||||||||||| ||||| | || || |||||| |||||||||    
T  25869260 aacttatgacatgtccataagttgttttcagcttatttccataaactctccatgatagcctatgaaaat 25869328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 39866726 - 39866790
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 135  Q
    |||||||||  ||||| || ||| ||||||||| |||||||||||||| ||||||||||||||||    
T  39866726 acaacttatagcatgtccataagctgttttcagtttattttcataagctcttcaagatagcttat 39866790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 14949942 - 14949855
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 160  Q
    |||||||||||||| || ||| ||||||||||||||||  |||| | ||| | ||||||||||||||| | ||| ||| |||||||||    
T  14949942 aacttatgacatgtccataagctgttttcagcttatttctataatctctttaggatagcttatgaaaagagtttgactctattttatc 14949855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 140
Target Start/End: Complemental strand, 27028883 - 27028840
Alignment:
Q  97 ttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||||||||| || ||||||||||||||||||    
T  27028883 ttttcagcttattttcataagctctccaagatagcttatgaaaa 27028840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 78 - 117
Target Start/End: Complemental strand, 30389170 - 30389131
Alignment:
Q  78 atgacatgttcacaagttgttttcagcttattttcataag 117  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  30389170 atgacatgttcataagttgttttcagcttattttcataag 30389131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 33714236 - 33714299
Alignment:
Q  79 tgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    |||| |||||| ||| ||||||||||||||||| |||||| || | ||||||||||||||||||    
T  33714236 tgacttgttcataagctgttttcagcttatttttataagctctcccagatagcttatgaaaata 33714299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 38421340 - 38421273
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||| || ||||||||||||||||| || || |||  |||||||||||||| ||||||    
T  38421340 aacttatgacatgtccataagttgttttcagcttacttacacaagatcttcaagatagcttttgaaaa 38421273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 105 - 160
Target Start/End: Original strand, 40280253 - 40280308
Alignment:
Q  105 ttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 160  Q
    |||||| ||||||| |||| |||||||||||||||| ||||| |||||||||||||    
T  40280253 ttatttccataagctcttctagatagcttatgaaaacaattttactttattttatc 40280308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 41606899 - 41606942
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    ||||||||||||||| |||||||||||||||||||| |||||||    
T  41606899 cttatgacatgttcaaaagttgttttcagcttatttccataagc 41606942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 75 - 142
Target Start/End: Original strand, 42215302 - 42215369
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    |||||||| |||||| ||| |||||||||||||||| ||||||| || || |||||| ||||||||||    
T  42215302 cttatgacttgttcataagctgttttcagcttatttacataagctctccaggatagcatatgaaaata 42215369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 3600735 - 3600781
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcactt 122  Q
    ||||||||||| || |||||||||||| |||||||||||||||||||    
T  3600735 ttatgacatgtccataagttgttttcaacttattttcataagcactt 3600781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 14339602 - 14339648
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcactt 122  Q
    ||||||||||| || |||||||||||| |||||||||||||||||||    
T  14339602 ttatgacatgtccataagttgttttcaacttattttcataagcactt 14339648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 779053 - 779122
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||||| |||||||||||| ||||||||  ||  | || |||||||| |||||||||    
T  779053 acaacttatgacatgttcataagttgttttcatcttattttggtacactctccaagatagtttatgaaaa 779122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 4281624 - 4281579
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataa 116  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||||    
T  4281624 acaacatatgacatgttcataagttgttttcatcttattttcataa 4281579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 30918190 - 30918122
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||| |||||| |||| |||||||||||||||||||| ||||||| || ||||| | ||||||||||    
T  30918190 acaacttgtgacat-ttcataagttgttttcagcttatttccataagctctccaagaaaacttatgaaaa 30918122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 32840977 - 32841022
Alignment:
Q  71 acaacttatgacat-gttcacaagttgttttcagcttattttcata 115  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||    
T  32840977 acaacttatgacattgttcataagttgttttcagcttattttcata 32841022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 41620283 - 41620352
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||| ||||||||||| || ||||||||||| ||||||||||| |||| |  ||||||||||||| ||||    
T  41620283 acaaattatgacatgtccataagttgttttccgcttattttcaaaagctcgacaagatagcttataaaaa 41620352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 44236835 - 44236884
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||| |||||||||||||||||||||| || ||| ||||||||||||||    
T  44236835 aagttattttcagcttattttcataagctctccaatatagcttatgaaaa 44236884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 2235653 - 2235717
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||| |||| ||||| |||| |||| ||||||| ||| |||||| ||||||||||    
T  2235653 ttatgacatgttcataagtcgtttttagctcatttccataagctctttaagataccttatgaaaa 2235717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 9956819 - 9956875
Alignment:
Q  84 tgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||| |||| ||||||||||||||||||||||  || |||||||| |||||||||    
T  9956819 tgttcataagtagttttcagcttattttcataagttctccaagatagattatgaaaa 9956875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 139
Target Start/End: Original strand, 12224891 - 12224959
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 139  Q
    |||||||||||||||| ||  |||| ||||||||||||||| || ||| ||||| ||| ||||||||||    
T  12224891 acaacttatgacatgtccatcagtttttttcagcttatttttatgagctcttcaggatggcttatgaaa 12224959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 27754477 - 27754413
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||| | | ||||||  |||||||||||||||||||| || ||| ||||||||||||||    
T  27754477 ttatgacatgattataagttgcgttcagcttattttcataagctctccaaaatagcttatgaaaa 27754413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 142
Target Start/End: Original strand, 9540992 - 9541059
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    |||||||||||| || || |||| ||||||||||||||| |||| ||  | |||||||||||||||||    
T  9540992 cttatgacatgtccataatttgtgttcagcttattttcaaaagctctctaggatagcttatgaaaata 9541059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 10075551 - 10075614
Alignment:
Q  79 tgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    ||||||||| ||||| || ||| ||||||||||||||||| ||  | |||||||||||||||||    
T  10075551 tgacatgttgacaagctgcttttagcttattttcataagctctctaggatagcttatgaaaata 10075614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 146
Target Start/End: Complemental strand, 12851250 - 12851179
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattt 146  Q
    ||||| ||||||||| ||| ||||||| |||||||||||||||| ||  | || |||||||||||| |||||    
T  12851250 cttataacatgttcataagatgttttcggcttattttcataagctctcaaggaaagcttatgaaaacaattt 12851179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 28769337 - 28769400
Alignment:
Q  77 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||| |||| || |||||||||||||||||||| ||||| | || ||| ||||||||||||||    
T  28769337 tatgatatgtccataagttgttttcagcttatttccataaactctccaaaatagcttatgaaaa 28769400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 142
Target Start/End: Original strand, 28784793 - 28784858
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    |||||||||||||| ||| | ||||||||||||||| | |||| ||  |||||||||||||||||||    
T  28784793 ttatgacatgttcataagct-ttttcagcttatttttacaagctctctaagatagcttatgaaaata 28784858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 29059795 - 29059857
Alignment:
Q  78 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| | ||||||||||| |||| || || || | ||||||||||||||||||||    
T  29059795 atgacatgttcatatgttgttttcagattatgttaatgagtatttcaagatagcttatgaaaa 29059857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 1930109 - 1930044
Alignment:
Q  76 ttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||| ||||| ||| ||||||||||||||||||| |||  |  ||||||||||||||||||    
T  1930109 ttatgacattgttcataagctgttttcagcttattttcacaaggtcaccaagatagcttatgaaaa 1930044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 3161617 - 3161662
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    ||||||||||||||||| ||  ||||||||||||||||| ||||||    
T  3161617 aacttatgacatgttcataaaatgttttcagcttatttttataagc 3161662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 5069771 - 5069706
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||| ||||||||| ||||  ||||||||||||||||||||||  |  |||||| ||||||||||    
T  5069771 cttataacatgttcataagtcattttcagcttattttcataagctttcgaagatatcttatgaaaa 5069706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 7918438 - 7918507
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||| |||||||||| ||| ||||| || |||||||  |||||| || |||||||||||| |||||    
T  7918438 acaacttaagacatgttcataagctgtttccaacttatttcaataagctctccaagatagcttacgaaaa 7918507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 7918789 - 7918834
Alignment:
Q  95 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||| || |||| || ||||||||||||||||||    
T  7918789 tgttttcagcttatttccacaagctctacaagatagcttatgaaaa 7918834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 37353245 - 37353310
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||| |||| ||  ||||||||| |||||||||||||| ||  ||||||||||| |||||    
T  37353245 cttatgacatattcataaactgttttcagattattttcataagctctcaaagatagcttaagaaaa 37353310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 39551201 - 39551270
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||| || ||| |||||| | |||||||| |||||| || || || ||||||||||||    
T  39551201 acaacttatgacatgtccaaaagctgtttttaacttatttttataagctctccaggaaagcttatgaaaa 39551270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 43504829 - 43504760
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||| ||| |||| | ||| |||||||||||||||| ||||||  || ||||||||||||| ||||    
T  43504829 acaacttacgacttgtttataagctgttttcagcttatttccataagttctccaagatagcttataaaaa 43504760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 11000573 - 11000621
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttca 124  Q
    ||||||| |||||| ||||||| |||||||||||| ||||||| |||||    
T  11000573 ttatgacttgttcataagttgtcttcagcttatttccataagctcttca 11000621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 11795166 - 11795102
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 139  Q
    |||||||||||| || ||  |||||||||||||||| ||||||| || ||  |||||||||||||    
T  11795166 cttatgacatgtccataacctgttttcagcttatttccataagctctccataatagcttatgaaa 11795102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 31168088 - 31168020
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 143  Q
    ||||||||||| ||| ||  | ||||||||||| |||||||||| |||| ||||| |||||| ||||||    
T  31168088 cttatgacatgctcataaacttttttcagcttactttcataagctcttctagataccttatgcaaataa 31168020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 31862570 - 31862502
Alignment:
Q  72 caacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||| | | || ||| |||||||||||||||||||||||| ||  | |||| ||||||||||    
T  31862570 caacttatgacctatgcataagctgttttcagcttattttcataagctctctaggataacttatgaaaa 31862502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 137
Target Start/End: Original strand, 42370359 - 42370419
Alignment:
Q  77 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatga 137  Q
    ||||||||||  ||||  |||||||||||||||| ||||| | ||||| ||||||||||||    
T  42370359 tatgacatgtctacaaactgttttcagcttatttccataaactcttcatgatagcttatga 42370419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 7244758 - 7244669
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 160  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||| || ||| |||||||||||||| | ||| ||||| |||||||    
T  7244758 acaatttatgacatgctcataagttgttttcagcttattttcataagctctccaatatagcttatgaaaacagtttgactttcttttatc 7244669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 75 - 158
Target Start/End: Original strand, 22551401 - 22551484
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttatttta 158  Q
    ||||||||||||||| | |||||||||||||||||| ||||||| || ||||||  |||||||||| ||||| |||||||||||    
T  22551401 cttatgacatgttcaaatgttgttttcagcttatttacataagctctccaagattacttatgaaaagaatttgactttatttta 22551484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 12110438 - 12110369
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||||||||  |||||| || |||||||||||||  |||||||||||||||||||||    
T  12110438 acaacttatgacatgttcacaaactgtttttagattattttcataagttcttcaagatagcttatgaaaa 12110369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 48917341 - 48917416
Alignment:
Q  76 ttatgacatgttcacaagttgtttt--cagcttattttcataagcacttcaagatagcttatgaaaataatttaac 149  Q
    |||||||||||||||||||||| ||  |||||||||||||||||| || |||||||||||||||||| || |||||    
T  48917341 ttatgacatgttcacaagttgtgtttccagcttattttcataagctctccaagatagcttatgaaaacaacttaac 48917416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 12792579 - 12792626
Alignment:
Q  95 tgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  12792579 tgttttcagcttattttcataagctcttcaagatagcttatgaaaata 12792626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 63 - 140
Target Start/End: Complemental strand, 529461 - 529384
Alignment:
Q  63 tattttggacaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||| ||| ||||||||||| ||||| ||| |||||||| | ||||||||||||| || ||||||||||||||||||    
T  529461 tatttgggagaacttatgacaagttcataagctgttttcaacatattttcataagctctccaagatagcttatgaaaa 529384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 34035994 - 34035907
Alignment:
Q  73 aacttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttat 159  Q
    |||||||||||| ||||| |||||||||||| |||||||||  |||  ||  ||||||||||||||||| ||||||||||||| ||||    
T  34035994 aacttatgacattgttcataagttgttttcaacttattttcgcaagttctctaagatagcttatgaaaacaatttaactttatattat 34035907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 46825178 - 46825107
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttc-agcttattt-tcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||| ||| |||||||||  ||||||||| ||||||||||| ||||||||||||||||||    
T  46825178 acaacttatgacatgtccacgagttgttttttagcttatttctcataagcactccaagatagcttatgaaaa 46825107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 25596091 - 25596042
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  25596091 aagttgttttcaacttattttcataagctctccaagatagcttatgaaaa 25596042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 6552288 - 6552360
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 147  Q
    |||||||||| |||| ||| |||||||||||||||||||||| | || || ||||| ||||||||||| ||||    
T  6552288 cttatgacatattcataagctgttttcagcttattttcataaactctgcatgatagtttatgaaaatagttta 6552360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 43250695 - 43250782
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat--gaaaataatttaactttattttatc 160  Q
    ||||||||||||||  ||||||||||||| |||| ||||||||| || ||| |||||||||  |||||  | ||||||||||||||||    
T  43250695 cttatgacatgttcgtaagttgttttcagtttatattcataagctctccaaaatagcttatacgaaaaacaattaactttattttatc 43250782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 44151477 - 44151541
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||| || ||| |||||||||||||||| |||||||  |||||||||| |||||||||    
T  44151477 ttatgacatgtccataagatgttttcagcttatttccataagcttttcaagatagtttatgaaaa 44151541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 21248002 - 21247939
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttca-taagcacttcaagatagcttat 135  Q
    ||||||||||||||||| |||||||||| |||||||||||| ||||| || |||||||| ||||    
T  21248002 aacttatgacatgttcataagttgttttaagcttattttcagtaagctctccaagataggttat 21247939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 46082114 - 46082067
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    |||||||||||||||  || ||||||||||||||||||||||||||||    
T  46082114 acaacttatgacatgaccataagttgttttcagcttattttcataagc 46082067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 47134749 - 47134796
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    ||||||||||||| || || ||||||||||||||||||||||||||||    
T  47134749 acaacttatgacacgtccataagttgttttcagcttattttcataagc 47134796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 4966231 - 4966165
Alignment:
Q  74 acttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||| |||| || ||||||||||||| |||||| ||||||| ||||| ||| |||||||||||    
T  4966231 acttatgatatgtccataagttgttttcagtttatttccataagctcttcaggatggcttatgaaaa 4966165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 117
Target Start/End: Complemental strand, 11048105 - 11048059
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataag 117  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  11048105 acaacttatgacatgttcataagctgttttcagcttattctcataag 11048059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 129
Target Start/End: Original strand, 25670578 - 25670636
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagata 129  Q
    ||||||||||||||||| | || |||||||||||||||||||| |||| || |||||||    
T  25670578 acaacttatgacatgttaataaattgttttcagcttattttcacaagctctccaagata 25670636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 9423586 - 9423655
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||| |||||||||||||| ||||||||||||||||||||  | |||| || || |||||||||| ||||    
T  9423586 acaatttatgacatgttcataagttgttttcagcttatttcaagaagctctccaggatagcttattaaaa 9423655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 12792642 - 12792687
Alignment:
Q  97 ttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    |||||||||||||| |||| || |||||||||||||||||||||||    
T  12792642 ttttcagcttatttccatatgctcttcaagatagcttatgaaaata 12792687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 24363601 - 24363662
Alignment:
Q  79 tgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||| || |||||||||||||||||||| ||||| | || || |||||||||||||||    
T  24363601 tgacatgtccataagttgttttcagcttatttccataacctctccaggatagcttatgaaaa 24363662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 29286864 - 29286804
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatg 136  Q
    ||||||||||||||  ||||||||||||||||||| |||||||  ||||| ||| ||||||    
T  29286864 ttatgacatgttcatcagttgttttcagcttatttacataagcttttcaaaataacttatg 29286804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 30317040 - 30316968
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 143  Q
    ||||||||| | ||||| | ||| |||||||| ||||||||| || ||| ||||||||| |||||||||||||    
T  30317040 acaacttataaaatgttaataagctgttttcaacttattttcgtatgcatttcaagataccttatgaaaataa 30316968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 12792514 - 12792561
Alignment:
Q  95 tgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    |||| |||||||||||  |||||| |||||||||||||||||||||||    
T  12792514 tgttatcagcttatttcaataagctcttcaagatagcttatgaaaata 12792561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 110
Target Start/End: Original strand, 20888386 - 20888425
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattt 110  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  20888386 acaacttatgccatgttcataagttgttttcagcttattt 20888425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 35267436 - 35267377
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctta 134  Q
    ||||||||||||||| | ||||||||||||||||||  |||||| || ||||||| ||||    
T  35267436 cttatgacatgttcataggttgttttcagcttatttctataagctctccaagataactta 35267377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 124
Target Start/End: Complemental strand, 44808234 - 44808183
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttca 124  Q
    |||||||||||||| || ||  |||||||||||||||||||||||| |||||    
T  44808234 aacttatgacatgtccataacctgttttcagcttattttcataagcccttca 44808183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 160
Target Start/End: Original strand, 5017958 - 5018023
Alignment:
Q  97 ttttcagcttattttcataagcacttcaagatagcttat--gaaaataatttaactttattttatc 160  Q
    |||||||||||||| |||||||  |||||||||||||||  || | |||||| |||||||||||||    
T  5017958 ttttcagcttatttccataagcttttcaagatagcttataagagagtaatttgactttattttatc 5018023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 36537986 - 36537944
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttca 113  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||    
T  36537986 acaacttatgacatgttcataagttgtttttagctttttttca 36537944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 42656563 - 42656482
Alignment:
Q  81 acatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat--gaaaataatttaactttattttatc 160  Q
    ||||||||| ||  ||||| | |||||||||||||||| || |||||||||||||   ||||| |||| |||||||||||||    
T  42656563 acatgttcataaaatgtttgcggcttattttcataagctctccaagatagcttatacaaaaatgatttgactttattttatc 42656482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 43219640 - 43219682
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataag 117  Q
    ||||||||||||||| ||| ||||||||||||||| |||||||    
T  43219640 cttatgacatgttcataagctgttttcagcttattctcataag 43219682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 9038185 - 9038121
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||| || |||||||||||||||||||| |||  || || ||||| |||||||||    
T  9038185 cttatgacatgttcataa-ttgttttcagcttattttcacaagttctccatgatagtttatgaaaa 9038121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 15740403 - 15740448
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataa 116  Q
    ||||||||||||||||||| ||| |||||| | |||||||||||||    
T  15740403 acaacttatgacatgttcataagctgtttttaacttattttcataa 15740448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 18962588 - 18962633
Alignment:
Q  95 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||| ||||||||||||||  || ||||||||||||||||||    
T  18962588 tgttttcaccttattttcataaggcctccaagatagcttatgaaaa 18962633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 18965726 - 18965771
Alignment:
Q  95 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| ||||||||||  || ||||||||||||||||||    
T  18965726 tgttttcagcttgttttcataagacctccaagatagcttatgaaaa 18965771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 27378840 - 27378889
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||| |||||||||||||| || || ||||| |||||||||    
T  27378840 aagttgttttcagtttattttcataagctctccaggatagtttatgaaaa 27378889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 33645953 - 33646021
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||  | |||||||||| || |||||| ||||||| | || ||||||||||||||||    
T  33645953 acaacttatgacatgtctataagttgtttttaggttatttccataagctc-tccagatagcttatgaaaa 33646021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 45859519 - 45859587
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||| ||||||||||||| | ||||||||||||||||||  |||||| ||||| |||||  ||||||||    
T  45859519 acaacatatgacatgttcata-gttgttttcagcttatttctataagctcttcatgatagtctatgaaaa 45859587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 46104583 - 46104628
Alignment:
Q  95 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||| |||||||||||||||||| |||||  ||||||||||||||    
T  46104583 tgtttccagcttattttcataagctcttcagcatagcttatgaaaa 46104628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 47559601 - 47559662
Alignment:
Q  79 tgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||| ||||||||||| ||| |||||||||||  || ||| ||| ||||||||||    
T  47559601 tgacatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaa 47559662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 3836702 - 3836765
Alignment:
Q  99 ttcagcttattttcataagcacttcaagatagcttat--gaaaataatttaactttattttatc 160  Q
    |||| ||||||||||| ||| || |||||||||||||  |||||| ||||||||| ||||||||    
T  3836702 ttcaacttattttcattagctctccaagatagcttatacgaaaatcatttaacttgattttatc 3836765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 6226148 - 6226192
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcata 115  Q
    |||||| ||| |||| ||| |||||||||||||||||||||||||    
T  6226148 acaactaatgtcatgctcataagttgttttcagcttattttcata 6226192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 7623205 - 7623145
Alignment:
Q  82 catgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    ||||| || ||||||||||  |||||||||| ||| | ||||||||||| |||||||||||    
T  7623205 catgtccataagttgtttttggcttattttcgtaaactcttcaagatagtttatgaaaata 7623145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 9872950 - 9872906
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcata 115  Q
    |||||||||||||||| || ||||||||| ||||| |||||||||    
T  9872950 acaacttatgacatgtccataagttgtttccagctcattttcata 9872906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 453
Target Start/End: Original strand, 25442323 - 25442359
Alignment:
Q  417 tagatacgatgtgtttataagttttagaggtcctgac 453  Q
    ||||||||||||||| || ||||||||||||||||||    
T  25442323 tagatacgatgtgttcatcagttttagaggtcctgac 25442359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 33601127 - 33601195
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttat 159  Q
    |||||||||| ||||||||||||||| | |||    |||||||||||||| | ||| ||||||||||||    
T  33601127 aagttgtttttagcttattttcataaactctttgcaatagcttatgaaaacagtttgactttattttat 33601195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 33871322 - 33871265
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 135  Q
    |||||||||||||| |||||||||| |||||||||  ||| || || |||||||||||||    
T  33871322 ttatgacatgttcataagttgttttgagcttattt--atatgctctccaagatagcttat 33871265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 81 - 113
Target Start/End: Complemental strand, 35007665 - 35007633
Alignment:
Q  81 acatgttcacaagttgttttcagcttattttca 113  Q
    ||||||||| |||||||||||||||||||||||    
T  35007665 acatgttcataagttgttttcagcttattttca 35007633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 39345544 - 39345480
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||| || |||||| ||||||||||||| ||||||  | ||| |||||||| ||||||    
T  39345544 ttatgacatgtccataagttgctttcagcttatttccataaggtcgtcaggatagcttttgaaaa 39345480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 111
Target Start/End: Original strand, 39539773 - 39539813
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttatttt 111  Q
    |||||||||||||||| || ||| |||||||||||||||||    
T  39539773 acaacttatgacatgtccataagctgttttcagcttatttt 39539813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 33887904 - 33887839
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||||||||||||||| ||||||| |||||||| |||| |||||||||||||||    
T  33887904 cttatgacatgttcacaagttgttttcaacttatttccataagcatttcaggatagcttatgaaaa 33887839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 4420721 - 4420649
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 143  Q
    |||| |||||||||||||| ||| |||||||||||||||| ||||||| || |||||||||||| ||||||||    
T  4420721 acaaattatgacatgttcataagctgttttcagcttatttccataagctctccaagatagcttaggaaaataa 4420649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 6647461 - 6647396
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||| ||  |||||||||||||||||    
T  6647461 cttatgacatgttcataagatgttttcaacttattttcataagctctctaagatagcttatgaaaa 6647396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 124
Target Start/End: Complemental strand, 6537023 - 6536972
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttca 124  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||| |||||    
T  6537023 aacttatgacatgttcataagttgttttcagcttatttccataagctcttca 6536972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 73 - 123
Target Start/End: Complemental strand, 9027654 - 9027604
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttc 123  Q
    |||||||||||||| || |||||||||||||||||||||||||||| ||||    
T  9027654 aacttatgacatgtccataagttgttttcagcttattttcataagctcttc 9027604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 13908537 - 13908479
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctt 133  Q
    ||||||||||||||  ||| |||||||||||||||||||||||| ||||| ||||||||    
T  13908537 cttatgacatgttcgtaagctgttttcagcttattttcataagctcttcatgatagctt 13908479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 31583750 - 31583668
Alignment:
Q  78 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 160  Q
    ||||||||| || |||||||||||| ||||||| |||||||  |||  ||||||||||||||| ||||| |||| ||||||||    
T  31583750 atgacatgtccataagttgttttcaacttatttccataagcttttcgggatagcttatgaaaacaatttgacttcattttatc 31583668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 2112278 - 2112209
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||||| ||||||||||| | ||||||  |||||||||  ||||||| |||||||||    
T  2112278 acaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaa 2112209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 2205610 - 2205671
Alignment:
Q  99 ttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 160  Q
    |||||||||||| ||||||| || |||||||||||||||||| ||||| ||||| |||||||    
T  2205610 ttcagcttatttccataagctctccaagatagcttatgaaaacaatttgactttgttttatc 2205671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 3528881 - 3528812
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||| || || ||||||||| ||||||||||||||| || |||||||| | |||||||    
T  3528881 acaacttatgacatgtccataacttgttttcatcttattttcataagctctccaagatagttcatgaaaa 3528812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 30863324 - 30863255
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||| || ||||||||||||||||| ||  |||||| ||||||| |||| ||||||||    
T  30863324 acaacttatgacatgtacataagttgttttcagcttacttctataagctcttcaagctagcctatgaaaa 30863255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 26694931 - 26694880
Alignment:
Q  96 gttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 147  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||| ||||||    
T  26694931 gttttcagcttattttcataagttcttcaagatagtttatgaaaacaattta 26694880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 835265 - 835310
Alignment:
Q  95 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||||||||||  || ||||||||||||||||||    
T  835265 tgttttcagcttattttcataagttctccaagatagcttatgaaaa 835310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 5564124 - 5564189
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| |  ||| |||||||||||||||| ||||| | |||||||| ||||||||||||    
T  5564124 cttatgacatgtccgaaagctgttttcagcttatttgcataaactcttcaagacagcttatgaaaa 5564189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 7931718 - 7931787
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||||  |||||||||||||||||||| | ||||| ||  | |||||||| ||||||    
T  7931718 acaacttatgacatgttcttaagttgttttcagcttatttccgtaagctctgtaggatagcttttgaaaa 7931787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 10616533 - 10616602
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||| |  ||||||| ||||||||||||| |||||| || ||| ||||||||| ||||    
T  10616533 acaacttatgacatgtccgtaagttgtgttcagcttatttttataagctctccaaaatagcttattaaaa 10616602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 20368172 - 20368241
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||||| ||| |  ||||| ||||||||||||||  || ||||| ||||||||||||    
T  20368172 acaacttatgacatgttcataagctagtttcaacttattttcataagttctccaagaaagcttatgaaaa 20368241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 27894100 - 27894055
Alignment:
Q  95 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||    
T  27894100 tgttttcagcttattttcataagcttttcaagatatcttatgaaaa 27894055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 31624164 - 31624099
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||| ||| |||||||| |||||||||||||   || ||||||||| ||||||||    
T  31624164 cttatgacatgttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaa 31624099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 32386559 - 32386624
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||| |||||| ||||| ||||||||||||||||||||||||| || || |||| || |||||||    
T  32386559 cttataacatgtccacaacttgttttcagcttattttcataagctctccaggataactaatgaaaa 32386624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 34403933 - 34403864
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||||| ||| |||||||| ||||||| ||||||| ||| |  | ||||||||||||    
T  34403933 acaacttatgacatgttcataaggtgttttcaccttatttccataagctctttagtacagcttatgaaaa 34403864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 34939591 - 34939526
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatg 136  Q
    ||||||||||||| || |  |||||||||||||||||||| ||||| | ||||| |||||||||||    
T  34939591 acaacttatgacacgtccgtaagttgttttcagcttatttccataacctcttcaggatagcttatg 34939526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 2455888 - 2455816
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 143  Q
    |||||||||||||||  || ||  | |||||| ||||||| ||||||| || |||||||||||||||||||||    
T  2455888 acaacttatgacatgcccataaactattttcaacttatttccataagctctccaagatagcttatgaaaataa 2455816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 17241254 - 17241314
Alignment:
Q  81 acatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaat 141  Q
    ||||||||| |||||||||||| ||||||| ||||| | || |||||||||| ||||||||    
T  17241254 acatgttcataagttgttttcaacttatttccataaactctccaagatagctaatgaaaat 17241314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 19275633 - 19275697
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||| |||||| || |||| | |||||| ||||||| ||||| |||||||||||||||    
T  19275633 ttatgacatgtccacaagctgatttcggtttatttccataagctcttcatgatagcttatgaaaa 19275697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 20370940 - 20370892
Alignment:
Q  92 agttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||| |||||||||||||||||| | ||||||| ||||||||    
T  20370940 agttgttttcatcttattttcataagcactcctagatagcatatgaaaa 20370892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 20512656 - 20512704
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 139  Q
    |||||||||||||||||||| ||||||| |||||  |||||||||||||    
T  20512656 aagttgttttcagcttatttccataagctcttcataatagcttatgaaa 20512704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 29837077 - 29837148
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 143  Q
    ||||||| |||||| || | ||||||||| ||||| |||||||||||| ||||| ||||| ||||||||||||    
T  29837077 acaacttctgacatatttataagttgttt-cagctaattttcataagctcttcaggatagtttatgaaaataa 29837148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 33832265 - 33832309
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcata 115  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||    
T  33832265 acaacttatgacatgtttataagttgtttttagcttattttcata 33832309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 821872 - 821833
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcata 115  Q
    |||||||||||||| ||| |||||||||||||||||||||    
T  821872 ttatgacatgttcataagctgttttcagcttattttcata 821833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 8364970 - 8365037
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||| |||||||||| ||||| |||||||||||||||||||| ||  |  || |||||||||||||||    
T  8364970 aactgatgacatgtttacaagctgttttcagcttattttcatcagttcaccatgatagcttatgaaaa 8365037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 31421023 - 31420976
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    |||||||||  ||| |||| ||||||||||||||||||||||||||||    
T  31421023 acaacttatcgcatattcataagttgttttcagcttattttcataagc 31420976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 138
Target Start/End: Complemental strand, 34939818 - 34939755
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaa 138  Q
    |||||||||||| || || ||||||||||||||||| ||||| | || || |||||||||||||    
T  34939818 cttatgacatgtccataaattgttttcagcttatttccataaactctccaggatagcttatgaa 34939755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 281841 - 281907
Alignment:
Q  72 caacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaa 138  Q
    |||||||||||||||  | |||||||||||||||||||| ||| ||| ||  | |||||||||||||    
T  281841 caacttatgacatgtctataagttgttttcagcttatttccatgagctctctaggatagcttatgaa 281907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 696676 - 696634
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataag 117  Q
    ||||||||||||||| ||| ||||||||||||||| |||||||    
T  696676 cttatgacatgttcataagctgttttcagcttattctcataag 696634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 10031809 - 10031723
Alignment:
Q  72 caacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa-tttaactttatttt 157  Q
    ||||||| ||||| | || |||||||||||| ||||||| | ||||| || ||||| ||||||| |||| || ||||||||||||||    
T  10031809 caacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaacaattttaactttatttt 10031723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 118
Target Start/End: Original strand, 29296292 - 29296334
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    ||||||||||| || ||||| ||||||||||||||||||||||    
T  29296292 ttatgacatgtccataagttattttcagcttattttcataagc 29296334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 31812036 - 31812074
Alignment:
Q  102 agcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  31812036 agcttattttcataagctctccaagatagcttatgaaaa 31812074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 110
Target Start/End: Original strand, 733171 - 733208
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattt 110  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  733171 aacttatgacatgtccacaagttgttttcagcatattt 733208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 1498035 - 1497990
Alignment:
Q  95 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||| ||||||||||||||| || |||||||| |||||||||    
T  1498035 tgttttcaccttattttcataagctctccaagatagtttatgaaaa 1497990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 1575973 - 1575928
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataa 116  Q
    ||||||||||||||||||| ||| |||||| | |||||||||||||    
T  1575973 acaacttatgacatgttcataagctgtttttaacttattttcataa 1575928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 13907901 - 13907856
Alignment:
Q  95 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||| | |||||||||||||| |||||||||||||| ||||||    
T  13907901 tgttttccgtttattttcataagctcttcaagatagcttttgaaaa 13907856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 27909636 - 27909677
Alignment:
Q  77 tatgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    |||||||||| || |||||||||||||||||||| |||||||    
T  27909636 tatgacatgtccataagttgttttcagcttatttccataagc 27909677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 32387073 - 32387118
Alignment:
Q  97 ttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    |||||||||||||||||||||| |||||  ||| ||||||||||||    
T  32387073 ttttcagcttattttcataagctcttcagaataacttatgaaaata 32387118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 33089580 - 33089515
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||| |||||||| | ||||||||||  ||||||||||||| || |  ||||||||||||||||||    
T  33089580 cttaggacatgtttataagttgttttacgcttattttcataggctccccaagatagcttatgaaaa 33089515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 7785740 - 7785796
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagc 131  Q
    ||||||||||||  | |||||||||||||||||||| ||||||| || ||| |||||    
T  7785740 cttatgacatgtctataagttgttttcagcttatttccataagctctccaaaatagc 7785796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 11600870 - 11600938
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 143  Q
    |||||||||||| || ||  | ||||||||||||||||||| || |||||  | |||||||||||||||    
T  11600870 cttatgacatgtccaaaaactattttcagcttattttcataggctcttcagaacagcttatgaaaataa 11600938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 13907650 - 13907594
Alignment:
Q  84 tgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| ||||||| ||||||||||||   || |||||| |||||||||||    
T  13907650 tgttcacaagttattttcagtttattttcataatttctccaagatggcttatgaaaa 13907594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 32577978 - 32578042
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 135  Q
    |||||||||||||||| |   || |||||||||||||||| |||| || ||||| ||||||||||    
T  32577978 acaacttatgacatgtccttgagctgttttcagcttatttccatatgctcttcaggatagcttat 32578042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 3e-18; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 36139952 - 36139897
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatag 130  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  36139952 cttatgacatgttcacaagctgttttcagcttattttcataagctcttcaagatag 36139897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 36101642 - 36101587
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatag 130  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||    
T  36101642 cttatgacatgttcacaagctgttttcagcttattttcataagctcttcaggatag 36101587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 36887580 - 36887513
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||| ||||||||||| ||| |||||||||||||||||||||||  ||||||||| |||||||||||    
T  36887580 aacttttgacatgttcataagatgttttcagcttattttcataagttcttcaagatggcttatgaaaa 36887513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 21367742 - 21367676
Alignment:
Q  75 cttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||| ||||||||| |||||||||||||||||||||||  || ||||||||||||||||||    
T  21367742 cttatgacattgttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaaa 21367676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 16790394 - 16790459
Alignment:
Q  95 tgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 160  Q
    ||||||||| ||||||||||||||  | |||||||||||||||||||||||| | |||||||||||    
T  16790394 tgttttcagtttattttcataagctatccaagatagcttatgaaaataatttgattttattttatc 16790459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 37273212 - 37273143
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||| || |||||||||||| ||||||| ||||||  || ||||||||||||||||||    
T  37273212 acaacttatgacatgtccataagttgttttcaacttatttccataagttctccaagatagcttatgaaaa 37273143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 23808060 - 23808120
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 135  Q
    |||||||||||||||||| ||||||||| ||||||||||||| | || |||||||||||||    
T  23808060 cttatgacatgttcacaaattgttttcatcttattttcataaactctccaagatagcttat 23808120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 54837030 - 54837098
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 143  Q
    ||||||||||||||| || |||||||| ||||||||| ||||||  | |||||||||||||||||||||    
T  54837030 cttatgacatgttcataacttgttttccgcttatttttataagctgtccaagatagcttatgaaaataa 54837098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 20669244 - 20669181
Alignment:
Q  77 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||| ||| ||||||| |||||||| ||||||| || ||||||||||||||||||    
T  20669244 tatgacatgttcataagctgttttccgcttatttacataagctctccaagatagcttatgaaaa 20669181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 136
Target Start/End: Original strand, 33883748 - 33883807
Alignment:
Q  77 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatg 136  Q
    ||||||||||||| |||||||||||||||||||||||||||  ||  |||||||||||||    
T  33883748 tatgacatgttcataagttgttttcagcttattttcataagttctctaagatagcttatg 33883807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 134
Target Start/End: Complemental strand, 42745116 - 42745053
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctta 134  Q
    ||||||||||||||||||| |||||||||||| ||||||| |||||||  || |||||||||||    
T  42745116 acaacttatgacatgttcataagttgttttcatcttatttccataagcttttgaagatagctta 42745053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 142
Target Start/End: Original strand, 52440658 - 52440725
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    ||||||||||||||| |||||||||||| || |||||||||||  ||||||||||  |||||||||||    
T  52440658 cttatgacatgttcataagttgttttcaactaattttcataagttcttcaagataaattatgaaaata 52440725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 39602201 - 39602271
Alignment:
Q  70 gacaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||| ||||||||||||||| || ||||||||| ||||||||||||||  ||  |||||||||||||||||    
T  39602201 gacagcttatgacatgttcataaattgttttcaacttattttcataagttctcaaagatagcttatgaaaa 39602271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 78 - 140
Target Start/End: Complemental strand, 40665500 - 40665438
Alignment:
Q  78 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| ||| ||||||||||||||||| |||||| || ||||||| ||||||||||    
T  40665500 atgacatgttcataagctgttttcagcttatttttataagctctccaagataacttatgaaaa 40665438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 24785279 - 24785214
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||| ||  | |||||||||||||||    
T  24785279 cttatgacatgttcataagttgtttttagcttatttacataagctctcgaggatagcttatgaaaa 24785214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 30573906 - 30573975
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||| ||||| |||||||| ||| |||||||||||||| ||||| ||| || ||||||||||||||||||    
T  30573906 acaaattatggcatgttcataagctgttttcagcttatgttcatcagctctccaagatagcttatgaaaa 30573975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 34924552 - 34924601
Alignment:
Q  93 gttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||||||    
T  34924552 gttgttttcagcttattttcataagctctctaagatagcttatgaaaata 34924601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 52619081 - 52619012
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||| |||||||||||||| ||| | |||||| |||||||||| |||| |||||||||||||| ||||||    
T  52619081 acaatttatgacatgttcataagctattttcaccttattttcacaagctcttcaagatagcttgtgaaaa 52619012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 36200174 - 36200110
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 135  Q
    |||||||||||||||| || |||||||||||||||||||| ||| ||| || || ||||||||||    
T  36200174 acaacttatgacatgtccataagttgttttcagcttatttccatgagctctacaggatagcttat 36200110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 45541645 - 45541577
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 143  Q
    ||||||||||||||| ||| ||||||||| ||||| |||||||   | |||||||||||||||||||||    
T  45541645 cttatgacatgttcataagctgttttcaggttattctcataagttatccaagatagcttatgaaaataa 45541577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 3044251 - 3044298
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  3044251 acaacttatgacatgttcataagctgttttcaacttattttcataagc 3044298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 45432936 - 45433007
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 147  Q
    |||||||||||||| |||||||||||||||||||| ||||||| || || |||  ||| |||||| ||||||    
T  45432936 ttatgacatgttcataagttgttttcagcttatttccataagctctacaggatgacttgtgaaaacaattta 45433007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 53736122 - 53736181
Alignment:
Q  81 acatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||| |||||| ||||||||||||||||||| |||||||  |||| |||||||||    
T  53736122 acatgttcataagttgctttcagcttattttcataaacacttcagtataggttatgaaaa 53736181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 143
Target Start/End: Complemental strand, 2825199 - 2825153
Alignment:
Q  97 ttttcagcttattttcataagcacttcaagatagcttatgaaaataa 143  Q
    |||| ||||||||||||||||| || |||||||||||||||||||||    
T  2825199 ttttaagcttattttcataagctctccaagatagcttatgaaaataa 2825153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 140
Target Start/End: Original strand, 20502083 - 20502129
Alignment:
Q  94 ttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||| |||||||| ||||| |||||||||||||||    
T  20502083 ttgttttcagcttattctcataagctcttcaggatagcttatgaaaa 20502129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 36878753 - 36878819
Alignment:
Q  76 ttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaat 141  Q
    ||||||||| || ||||||  ||||||||||| ||||||||||  ||||||||||||||||||||||    
T  36878753 ttatgacattgtccacaagcggttttcagctttttttcataagttcttcaagatagcttatgaaaat 36878819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 2719526 - 2719477
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||| ||||||||||||||||||  || ||||||||||||||||||    
T  2719526 aagttgttctcagcttattttcataagttctccaagatagcttatgaaaa 2719477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 8933861 - 8933796
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| || ||||||  || ||||||||||||||||| || ||||||| ||||||||||    
T  8933861 cttatgacatgtccaaaagttgcatttagcttattttcataagctctccaagataacttatgaaaa 8933796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 25925818 - 25925773
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||    
T  25925818 aacttatgacatgttcataagctgttttcaacttattttcataagc 25925773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 35394494 - 35394559
Alignment:
Q  76 ttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||| ||||| ||| |||||||| |||||||||||||   |||||||||||||||||||||    
T  35394494 ttatgacattgttcataagctgttttcaacttattttcataaattcttcaagatagcttatgaaaa 35394559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 160
Target Start/End: Complemental strand, 37825196 - 37825111
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 160  Q
    |||||||||||| || ||||||||||||| |||||| ||||||| || || || |||| || |||| |||||||||| || |||||    
T  37825196 cttatgacatgtccataagttgttttcaggttatttccataagctctccaggaaagctaataaaaacaatttaacttgatattatc 37825111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 47249481 - 47249538
Alignment:
Q  74 acttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagc 131  Q
    |||||||||||||||| ||||||||||  |||||||||||||||  || |||||||||    
T  47249481 acttatgacatgttcataagttgtttttggcttattttcataagtcctccaagatagc 47249538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 47513731 - 47513670
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagct 132  Q
    |||| |||||||| ||||| ||||||||||||  |||||||||||||| || ||||||||||    
T  47513731 acaagttatgacacgttcataagttgttttcaatttattttcataagctctccaagatagct 47513670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 50600170 - 50600239
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||| ||||||||| ||| || |||||||||||||||||||||||  || ||| |||||| |||||||    
T  50600170 acaactcatgacatgtccacgagctgttttcagcttattttcataagttctccaatatagctgatgaaaa 50600239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 12985357 - 12985425
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttat 159  Q
    ||||||||||| |||||||| ||||||  ||| | ||||||||||||||| | |||| |||||||||||    
T  12985357 aagttgttttcggcttatttccataagttcttgaggatagcttatgaaaacagtttatctttattttat 12985425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 13371175 - 13371127
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 139  Q
    |||||||||||||||||||| ||||||| |||||  |||||||||||||    
T  13371175 aagttgttttcagcttatttccataagctcttcataatagcttatgaaa 13371127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 26320107 - 26320163
Alignment:
Q  84 tgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||| ||||||||||||| |||||||| ||||  |||||||| ||||||||||||    
T  26320107 tgttcataagttgttttcagtttattttcgtaagttcttcaagagagcttatgaaaa 26320163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 151
Target Start/End: Complemental strand, 26479003 - 26478943
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactt 151  Q
    |||||||||| | ||||||||||||  | ||| | ||||||||||||||||||||||||||    
T  26479003 aagttgtttttaacttattttcatatactctttaggatagcttatgaaaataatttaactt 26478943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 29771916 - 29771852
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 135  Q
    |||||||| ||||||| || |||||||||||| ||||||| |||||||   ||||||||||||||    
T  29771916 acaacttaggacatgtccataagttgttttcaacttatttccataagcttctcaagatagcttat 29771852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 140
Target Start/End: Original strand, 33965486 - 33965550
Alignment:
Q  77 tatgacatgttcacaagttgttttcagcttattttc-ataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||  || ||||| |||||||||| ||||| |||||| |||||||||||||||||||||    
T  33965486 tatgacatgcccataagttattttcagctttttttccataagctcttcaagatagcttatgaaaa 33965550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 111
Target Start/End: Complemental strand, 41724290 - 41724250
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttatttt 111  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  41724290 acaacttatgacatgtccataagttgttttcagcttatttt 41724250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 1816659 - 1816592
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| |||| | | ||||||||||||||||| |||||| || ||  ||||||||||||||    
T  1816659 aacttatgacattttcataggctgttttcagcttattttgataagctctccagtatagcttatgaaaa 1816592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 13413979 - 13413920
Alignment:
Q  100 tcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttat 159  Q
    |||||||||||| ||||||  |||||||||||||||||||| |  |||| ||||||||||    
T  13413979 tcagcttattttgataagctgttcaagatagcttatgaaaacagcttaaatttattttat 13413920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 25453863 - 25453922
Alignment:
Q  83 atgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    ||||||||||| | ||||||||||||||||||||||  | || ||||| |||||||||||    
T  25453863 atgttcacaagctcttttcagcttattttcataagctttccaggatagtttatgaaaata 25453922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 34414796 - 34414847
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    |||||||||||||||||||||||||| | || || ||||| |||||||||||    
T  34414796 aagttgttttcagcttattttcataaactctccatgatagtttatgaaaata 34414847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 118
Target Start/End: Complemental strand, 36445899 - 36445856
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    |||||||||||||||  ||||||||||| |||||||||||||||    
T  36445899 cttatgacatgttcattagttgttttcatcttattttcataagc 36445856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 43115134 - 43115087
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    |||||||||||||||| || || ||||||||||||||||| |||||||    
T  43115134 acaacttatgacatgtccataacttgttttcagcttatttccataagc 43115087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 51130822 - 51130759
Alignment:
Q  77 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||| || |||||| ||||||||||||||||  ||| || || |||||||||||||||    
T  51130822 tatgacatgtccataagttgctttcagcttattttcaatagctctccatgatagcttatgaaaa 51130759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 5391953 - 5391911
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataag 117  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||    
T  5391953 cttatgacatgttcataagctgttttcaacttattttcataag 5391911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 5396271 - 5396229
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataag 117  Q
    ||||||||||||| | ||| |||||||||||||||||||||||    
T  5396271 cttatgacatgttaataaggtgttttcagcttattttcataag 5396229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 39723236 - 39723278
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataag 117  Q
    ||||||||||||||| ||| ||||||||||||||| |||||||    
T  39723236 cttatgacatgttcataagctgttttcagcttattctcataag 39723278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 41633415 - 41633369
Alignment:
Q  94 ttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||||||||||| || ||| |||||| |||||||    
T  41633415 ttgttttcagcttattttcataagctctccaaaatagctgatgaaaa 41633369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 49465780 - 49465826
Alignment:
Q  166 atagcttacacataggcgtttttcatgataaatgtttatgctataaa 212  Q
    |||||||||||||| |||||| ||||||||| || ||||||||||||    
T  49465780 atagcttacacataagcgtttctcatgataagtgattatgctataaa 49465826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 1217796 - 1217861
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| || |||||||||||| |||| |||||||||  ||  | |||||||||||||||    
T  1217796 cttatgacatgtccataagttgttttcatcttactttcataagttctcaaggatagcttatgaaaa 1217861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 143
Target Start/End: Complemental strand, 14145959 - 14145918
Alignment:
Q  102 agcttattttcataagcacttcaagatagcttatgaaaataa 143  Q
    |||||||||||||||| | | |||||||||||||||||||||    
T  14145959 agcttattttcataagtaatccaagatagcttatgaaaataa 14145918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 20170720 - 20170769
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||| ||||||||| ||||||| || |||||||||||| |||||    
T  20170720 aagttgtttttagcttatttgcataagctctacaagatagcttaggaaaa 20170769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 21574568 - 21574499
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||||| ||| || ||| ||||||||| ||||||| || || | |||||||| ||||    
T  21574568 acaacttatgacatgttcataagctgcttttagcttatttccataagctctccatgttagcttataaaaa 21574499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 34383000 - 34382951
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| ||||||||| |||||  |||| |||||||||||||||    
T  34383000 aagttgttttcatcttattttcttaagcttttcaggatagcttatgaaaa 34382951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 34610801 - 34610866
Alignment:
Q  75 cttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 139  Q
    |||||||||| ||||| |||| |||||||||| |||||||||||  |  |||||||||||||||||    
T  34610801 cttatgacattgttcataagtggttttcagctgattttcataagttcgccaagatagcttatgaaa 34610866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 34954154 - 34954113
Alignment:
Q  77 tatgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    |||||||||||||  || ||||||||||||||||||||||||    
T  34954154 tatgacatgttcatgagctgttttcagcttattttcataagc 34954113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 41671381 - 41671320
Alignment:
Q  78 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 139  Q
    |||||||||  | |||||||||||| |||||||||||||    |||||||||||||||||||    
T  41671381 atgacatgtctataagttgttttcaacttattttcataaatttttcaagatagcttatgaaa 41671320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 160
Target Start/End: Original strand, 46407906 - 46407975
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 160  Q
    |||||||||  |||||||||||| |||| | |||  |||||||||||||| | |||||||||| ||||||    
T  46407906 aagttgtttctagcttattttcacaagctcatcacaatagcttatgaaaacagtttaactttactttatc 46407975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 54180776 - 54180841
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| || |||||||||| |||||||||  |||||| || ||  ||||||||||||||    
T  54180776 cttatgacatgtccataagttgtttttagcttatttatataagctctccataatagcttatgaaaa 54180841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 139
Target Start/End: Original strand, 482784 - 482852
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 139  Q
    ||||||||| ||||| ||| | | | |||||||||||||| ||||| | ||||||||||| ||||||||    
T  482784 acaacttataacatgctcatatgatattttcagcttatttccataaactcttcaagatagtttatgaaa 482852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 2071109 - 2071065
Alignment:
Q  96 gttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||| ||||||||||||||||| |||||  ||||||||||||||    
T  2071109 gtttttagcttattttcataagctcttcatcatagcttatgaaaa 2071065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 2128255 - 2128319
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||| ||||||||| ||| ||||||||||||||||||||| |  ||  ||||| |||||||||||    
T  2128255 ttataacatgttcataagctgttttcagcttattttcatacgttctaaaagatggcttatgaaaa 2128319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 5166395 - 5166343
Alignment:
Q  77 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagata 129  Q
    ||||||||||||| ||| |||||||| |||||||||||| || ||| ||||||    
T  5166395 tatgacatgttcataagctgttttcatcttattttcatacgctcttgaagata 5166343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 121
Target Start/End: Original strand, 11040612 - 11040656
Alignment:
Q  77 tatgacatgttcacaagttgttttcagcttattttcataagcact 121  Q
    |||||||||| || ||||||||||| |||||||||||||| ||||    
T  11040612 tatgacatgtccataagttgttttcggcttattttcataaacact 11040656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 20195030 - 20195077
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttca 124  Q
    ||||||||| |||| |||||||||||||||| ||||||||||| |||||    
T  20195030 ttatgacatattcaaaagttgttttcagctt-ttttcataagctcttca 20195077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 21862177 - 21862233
Alignment:
Q  81 acatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatga 137  Q
    |||||| || |||||||||||||||||||| ||||||| || | |||||||| ||||    
T  21862177 acatgtccataagttgttttcagcttatttccataagctctcccagatagctaatga 21862233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 23793642 - 23793594
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 139  Q
    ||||||||||||||||||||  ||||||  | |||||||||||||||||    
T  23793642 aagttgttttcagcttatttctataagctttccaagatagcttatgaaa 23793594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 25447250 - 25447305
Alignment:
Q  84 tgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||| |||||||||||| || ||||||| |  |||||||||||||||||||    
T  25447250 tgttcacaagctgttttcagctttttctcataag-aaatcaagatagcttatgaaaa 25447305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 33405160 - 33405228
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttat-tttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||| ||||||| ||  ||||||| |||||  |||||||||  |||||||||||||||||||||    
T  33405160 aacttatgatatgttcataaactgttttcggcttaactttcataagttcttcaagatagcttatgaaaa 33405228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 37138344 - 37138296
Alignment:
Q  95 tgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 143  Q
    |||||||||||||||||| ||| | ||  ||||||||||||||||||||    
T  37138344 tgttttcagcttattttcctaaactctctaagatagcttatgaaaataa 37138296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 140
Target Start/End: Original strand, 48048975 - 48049043
Alignment:
Q  72 caacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||| ||||||||| || ||| |||||||||||||||| ||||| | |  |||||||||| |||||||    
T  48048975 caactcatgacatgtccataagctgttttcagcttatttccataacctccccaagatagctaatgaaaa 48049043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 50952407 - 50952347
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 135  Q
    ||||||||||||||| ||  |||||| ||||||||| ||||||| || |||||||| ||||    
T  50952407 cttatgacatgttcataaactgttttaagcttatttccataagctctccaagatagtttat 50952347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 28300297 - 28300367
Alignment:
Q  77 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 147  Q
    ||||||||||||  |||||||||||| ||||||||||||||| |||||||||||| |||||||||| ||||    
T  28300297 tatgacatgttcttaagttgttttcaacttattttcataagctcttcaagatagcctatgaaaatagttta 28300367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 23819163 - 23819098
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| || |||||||||||| |||||||  |||||| |||||||||||||||||||||    
T  23819163 cttatgacatgtccataagttgttttcatcttatttctataagctcttcaagatagcttatgaaaa 23819098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 47800676 - 47800632
Alignment:
Q  96 gttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  47800676 gttttcagcttattttcataagctcttcaagatagcttatgaaaa 47800632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 2996651 - 2996582
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||| || ||| | |||||| |||||||||||| || || ||||||||||||||||||    
T  2996651 acaacttatgacatgtccataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaa 2996582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 4471246 - 4471177
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||| | || ||||||| |||| |||||||||| ||||  ||||||||||||||||||||    
T  4471246 acaacttatgacatatccataagttgtattcaacttattttcagaagcttttcaagatagcttatgaaaa 4471177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 17884134 - 17884077
Alignment:
Q  83 atgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||| ||||||||||||||| |||||||||||| || ||| ||||||||||||||    
T  17884134 atgttcataagttgttttcagctaattttcataagctctccaatatagcttatgaaaa 17884077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 21043231 - 21043316
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 160  Q
    ||||||||| ||||| ||| |||||||||  |||||||||| || ||||| ||||||||||||||| | ||||||| || ||||||    
T  21043231 cttatgacacgttcataagctgttttcagtgtattttcatatgctcttcaggatagcttatgaaaacagtttaactataatttatc 21043316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 29263444 - 29263379
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||| ||||||| |||||||||||||||||||| || |||| || || |||||||||||||||    
T  29263444 cttatgatatgttcataagttgttttcagcttatttccacaagctctgcaggatagcttatgaaaa 29263379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 47146028 - 47145971
Alignment:
Q  83 atgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||| |||||||||||| ||||||||||||||| |||||||| || |||||||||    
T  47146028 atgttcataagttgttttcaccttattttcataagctcttcaagacagtttatgaaaa 47145971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 52746836 - 52746901
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||| |||||||||| ||| ||||||||||| ||||||||||||  | ||||||||||||||||||    
T  52746836 cttaagacatgttcataagctgttttcagctgattttcataagccttacaagatagcttatgaaaa 52746901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 53673670 - 53673719
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||||    
T  53673670 aagttgttttcagcttatttacataagctctccaagatagcttatgaaaa 53673719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 159
Target Start/End: Complemental strand, 4500899 - 4500836
Alignment:
Q  96 gttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttat 159  Q
    ||||||||||||||||||||| | || ||| ||||||| |||||| ||||||||||| ||||||    
T  4500899 gttttcagcttattttcataatctctccaaaatagcttttgaaaacaatttaactttgttttat 4500836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 46019623 - 46019690
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||| | |||||||||||| ||||| ||||||||| ||||  |||| ||||||||||    
T  46019623 aacttatgacatgttgataagttgttttcaacttatattcataagctcttcgggataacttatgaaaa 46019690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 51630165 - 51630118
Alignment:
Q  95 tgttttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    ||||||||||||||||||||||   |||||||||||||||||||||||    
T  51630165 tgttttcagcttattttcataaattcttcaagatagcttatgaaaata 51630118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 7694009 - 7694071
Alignment:
Q  78 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| |||||||||||||||||||| ||||| | || || |||| ||||||||||    
T  7694009 atgacatgttcataagttgttttcagcttatttccataaactctccaggataacttatgaaaa 7694071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 24747390 - 24747348
Alignment:
Q  78 atgacatgttcacaagttgttttcagcttattttcataagcac 120  Q
    |||||||||||| ||||||||||||||||||||||||| ||||    
T  24747390 atgacatgttcataagttgttttcagcttattttcatatgcac 24747348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 4798566 - 4798627
Alignment:
Q  79 tgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||| || ||| |||||| ||||||||| ||||||| || ||||||||||||||||||    
T  4798566 tgacatgtacataagctgttttgagcttatttgcataagctctccaagatagcttatgaaaa 4798627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 18011924 - 18011871
Alignment:
Q  96 gttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaac 149  Q
    ||||| ||||||||||||||| | ||||||||||||||||||||| | ||||||    
T  18011924 gtttttagcttattttcataaactcttcaagatagcttatgaaaacagtttaac 18011871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 18628555 - 18628604
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||||||| ||||||| || ||||||| ||||||||||    
T  18628555 aagttgttttcagcttatttccataagctctccaagataacttatgaaaa 18628604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 160
Target Start/End: Complemental strand, 35743356 - 35743271
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 160  Q
    ||||||||||||| | ||||||||| || ||||||| ||||| | ||||| ||||| |||||||| || |||  ||||||||||||    
T  35743356 cttatgacatgtttataagttgtttccaacttatttccataaactcttcatgatagtttatgaaagtagtttgcctttattttatc 35743271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 40532586 - 40532655
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||| | ||||||| |||||||||||| ||||||||| || || || ||||| ||||||||||||    
T  40532586 acaacttattatatgttcataagttgttttcatcttattttcgtaggctctccaagacagcttatgaaaa 40532655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 160
Target Start/End: Original strand, 5131262 - 5131335
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagctt----atgaaaataatttaactttattttatc 160  Q
    |||||||||||||||||||| ||||||| || || ||||||||    ||||||| | |||||||||||||||||    
T  5131262 aagttgttttcagcttatttccataagctctccaggatagcttttacatgaaaacattttaactttattttatc 5131335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 44249359 - 44249295
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 139  Q
    ||||||||||||| | ||||| | |||||||||||||||||| | || |||||||| ||||||||    
T  44249359 cttatgacatgttgataagttttcttcagcttattttcataaactctccaagatagtttatgaaa 44249295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 118
Target Start/End: Complemental strand, 1137786 - 1137743
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    ||||||||||||||| ||||||||||||| |||||| |||||||    
T  1137786 cttatgacatgttcataagttgttttcagtttatttccataagc 1137743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 8469374 - 8469413
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcata 115  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  8469374 ttatgacatgttcataagttgttttcagcttatttccata 8469413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 25548140 - 25548207
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttatttta 158  Q
    |||||||||||| ||||||||||||||| || |   |||| ||||||||| || ||||||||||||||    
T  25548140 aagttgttttcaacttattttcataagctctgctgtatagtttatgaaaacaacttaactttatttta 25548207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 42641635 - 42641702
Alignment:
Q  75 cttatgacatgttcacaagttgtttt-cagcttat-tttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||| |  ||| ||||||||||||||    
T  42641635 cttatgacatgttcacaagctgttttgcagcttatatttcataagctcaccaaaatagcttatgaaaa 42641702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 118
Target Start/End: Complemental strand, 43824357 - 43824314
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    |||||| |||||||| |||||||||||||||||||| |||||||    
T  43824357 cttatggcatgttcataagttgttttcagcttatttccataagc 43824314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 110
Target Start/End: Complemental strand, 46401342 - 46401303
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattt 110  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  46401342 acaacttatgacatgttcataagttgtattcagcttattt 46401303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 55084483 - 55084542
Alignment:
Q  81 acatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||| ||| || ||||||||||||||||||||| ||  ||||||||| |||||||    
T  55084483 acatgttcataagctggtttcagcttattttcataagctctctaagatagctcatgaaaa 55084542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 825485 - 825551
Alignment:
Q  74 acttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| |||  |  |||||||||||||||||||||||  || ||| ||||||||||||||    
T  825485 acttatgacatgctcattaactgttttcagcttattttcataagttctccaaaatagcttatgaaaa 825551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 2111073 - 2111111
Alignment:
Q  102 agcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  2111073 agcttattttcataagtccttcaagatagcttatgaaaa 2111111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 117
Target Start/End: Complemental strand, 4691926 - 4691880
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataag 117  Q
    |||||||||||||||  || | |||||||||||||||||||||||||    
T  4691926 acaacttatgacatgcccatatgttgttttcagcttattttcataag 4691880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 102 - 140
Target Start/End: Complemental strand, 29778842 - 29778804
Alignment:
Q  102 agcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  29778842 agcttattttcataagctcttcaaggtagcttatgaaaa 29778804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 30631290 - 30631248
Alignment:
Q  98 tttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||||||||||||| |||||| | |||||||    
T  30631290 tttcagcttattttcataagcacttccagataggtaatgaaaa 30631248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 147
Target Start/End: Complemental strand, 53155338 - 53155265
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 147  Q
    ||||||||||||||||  | || ||| |||||||||||||||| |||   |||| ||||||||||||||||| ||||    
T  53155338 acaacttatgacatgtctataaattgctttcagcttattttcacaag---ttcatgatagcttatgaaaatagttta 53155265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 3155657 - 3155612
Alignment:
Q  95 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||||||| ||  ||||||||||| |||||||||    
T  3155657 tgttttcagcttattttcattagttcttcaagatagtttatgaaaa 3155612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 14011288 - 14011247
Alignment:
Q  95 tgttttcagcttattttcataagcacttcaagatagcttatg 136  Q
    |||||||||||||||| ||||||| || ||||||||||||||    
T  14011288 tgttttcagcttatttccataagctctccaagatagcttatg 14011247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 134
Target Start/End: Original strand, 30377433 - 30377470
Alignment:
Q  97 ttttcagcttattttcataagcacttcaagatagctta 134  Q
    |||||||||||||||||||||| || ||||||||||||    
T  30377433 ttttcagcttattttcataagctctccaagatagctta 30377470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 35290203 - 35290248
Alignment:
Q  95 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||||  ||||| ||| |||||||||||||||||    
T  35290203 tgttttcagcttattttagtaagctcttaaagatagcttatgaaaa 35290248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 42461323 - 42461282
Alignment:
Q  77 tatgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    |||||| |||||| |||||| |||||||||||||||||||||    
T  42461323 tatgacgtgttcataagttgatttcagcttattttcataagc 42461282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 43932506 - 43932437
Alignment:
Q  78 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 147  Q
    ||||||||| || |||||||||||| |||||||||| |||  |||||  ||| |||||||||||| ||||    
T  43932506 atgacatgtccataagttgttttcatcttattttcacaagttcttcagaataacttatgaaaatagttta 43932437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 110
Target Start/End: Complemental strand, 46201424 - 46201387
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattt 110  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  46201424 aacttatgacatgttcataggttgttttcagcttattt 46201387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 46415784 - 46415853
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||| |||||||||| || ||||||||||||||| |||||  ||||| ||  | |||||||||||||||    
T  46415784 acaacctatgacatgtccataagttgttttcagctaattttactaagctctcgaggatagcttatgaaaa 46415853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 47118979 - 47119024
Alignment:
Q  93 gttgttttcagcttattttcataagcacttcaagatagcttatgaa 138  Q
    |||||||||||||||| ||||||||  |||||||||||| ||||||    
T  47118979 gttgttttcagcttatcttcataagttcttcaagatagcatatgaa 47119024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 49219197 - 49219148
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||||||| ||||| | ||| ||||||| |||||||||    
T  49219197 aagttgttttcagcttatttccataatctctttaagatagtttatgaaaa 49219148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 52735195 - 52735131
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| || | ||| |||| ||||||||| ||||||| ||||||||||||||| |||||    
T  52735195 cttatgacatgtccatatgttatttt-agcttatttccataagctcttcaagatagcttacgaaaa 52735131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 139
Target Start/End: Original strand, 488118 - 488186
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 139  Q
    |||||||||||||||| || ||| |||||||| ||||||| | |||   || |||||||||||||||||    
T  488118 acaacttatgacatgtgcataagctgttttcatcttatttacgtaaattctccaagatagcttatgaaa 488186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 2592321 - 2592365
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttat 135  Q
    |||||||||||||||||||| ||||||| || ||| |||||||||    
T  2592321 aagttgttttcagcttatttccataagctctccaaaatagcttat 2592365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 139
Target Start/End: Original strand, 2874616 - 2874684
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 139  Q
    |||||||||||||||| || ||  | ||||| |||||||| |||||||||| |  ||||||||||||||    
T  2874616 acaacttatgacatgtccataatctattttccgcttatttccataagcactcctggatagcttatgaaa 2874684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 17751160 - 17751200
Alignment:
Q  95 tgttttcagcttattttcataagcacttcaagatagcttat 135  Q
    |||||| ||||||||||||||||| || |||||||||||||    
T  17751160 tgttttaagcttattttcataagctctgcaagatagcttat 17751200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 19250623 - 19250555
Alignment:
Q  72 caacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||| || ||| || ||||| |||||||| ||| || |||||||||| ||||| ||||    
T  19250623 caacttatgacatgtccataagctgatttcaacttatttttatatgctcttcaagataacttataaaaa 19250555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 48719388 - 48719428
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataa 116  Q
    |||||||||||||  ||| ||||||||||||||||||||||    
T  48719388 ttatgacatgttcgtaagctgttttcagcttattttcataa 48719428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 50569321 - 50569369
Alignment:
Q  71 acaacttatgacatgttcacaagtt-gttttcagcttattttcataagc 118  Q
    |||||||||||||| |||| ||||| |||||||||||||| ||||||||    
T  50569321 acaacttatgacattttcataagtttgttttcagcttattgtcataagc 50569369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 53792629 - 53792585
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttat 135  Q
    |||||||||||||||||||||||||| | || |||||||| ||||    
T  53792629 aagttgttttcagcttattttcataaactctccaagatagtttat 53792585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 5e-17; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 17258879 - 17258944
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| ||||| ||||| |||||||||    
T  17258879 cttatgacatgttcataagctgttttcagcttattttcataagctcttcaggatagtttatgaaaa 17258944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 11707128 - 11707064
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| | ||||||||||||||||||||||| |||| || ||||||||||||||||||    
T  11707128 ttatgacatgtttataagttgttttcagcttattttcaaaagctctacaagatagcttatgaaaa 11707064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 12242704 - 12242791
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 160  Q
    |||||||||||||  ||  |||||||||||||||| || ||||||| || |||||||||||||||||| ||||| ||| |||||||||    
T  12242704 aacttatgacatgaacattagttgttttcagcttacttccataagctctccaagatagcttatgaaaacaatttgactctattttatc 12242791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 71 - 146
Target Start/End: Original strand, 37611207 - 37611282
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattt 146  Q
    ||||||| ||||||||||| ||| ||||||||| |||||| ||||||| || |||||||||||||||||| |||||    
T  37611207 acaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaacaattt 37611282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 71 - 146
Target Start/End: Original strand, 37787937 - 37788012
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattt 146  Q
    ||||||| ||||||||||| ||| ||||||||| |||||| ||||||| || |||||||||||||||||| |||||    
T  37787937 acaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaacaattt 37788012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 148
Target Start/End: Original strand, 10125710 - 10125787
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaa 148  Q
    ||||||||||||||||| | ||| |||||||||||||||||||||||| || || | || ||||||||||||| ||||    
T  10125710 acaacttatgacatgttgataaggtgttttcagcttattttcataagctctccatggtaacttatgaaaataacttaa 10125787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 13604845 - 13604910
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| || | |||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  13604845 cttatgacatgtccatacgttgttttcaacttattttcataagctcttcaagataacttatgaaaa 13604910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 36639596 - 36639531
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||| ||| || |||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  36639596 cttatgacgtgtccataagttgttttcctcttattttcataagctcttcaagatagcttatgaaaa 36639531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 138
Target Start/End: Original strand, 12459993 - 12460060
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaa 138  Q
    ||||||||||||||||||| | ||||||||  |||||||||||||||| || ||||||||||| ||||    
T  12459993 acaacttatgacatgttcatatgttgtttttggcttattttcataagctctgcaagatagcttgtgaa 12460060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 7674726 - 7674657
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||| | ||| ||||||||||||||||||| ||   || ||||||||||||||||||    
T  7674726 acaacttatgacatgtttataaggtgttttcagcttattttcacaaattctccaagatagcttatgaaaa 7674657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 10272423 - 10272492
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||    |||||||||||||||||||||||||| | || |||||| |||||||||||    
T  10272423 acaacttatgacatgtctgtaagttgttttcagcttattttcataaactctccaagatggcttatgaaaa 10272492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 17368754 - 17368685
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||||| | |  ||||||||||||||| ||||| | || ||||||||||||||||||    
T  17368754 acaacttatgacatgttcatatgcagttttcagcttatttccataacctctccaagatagcttatgaaaa 17368685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 479
Target Start/End: Complemental strand, 500440 - 500368
Alignment:
Q  407 tccaaagctgtagatacgatgtgtttataagttttagaggtcctgacgttcgcaacacttttgttgatcatct 479  Q
    ||||||||| |||||| ||||||||||| ||||| |||||| | |||   |||||||||||||||||||||||    
T  500440 tccaaagctatagatatgatgtgtttatcagtttcagaggttccgacacacgcaacacttttgttgatcatct 500368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 4014429 - 4014485
Alignment:
Q  84 tgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||| ||| |||||||||||||||||||||||  || ||||||||||||||||||    
T  4014429 tgttcataagctgttttcagcttattttcataagttctccaagatagcttatgaaaa 4014485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 12521602 - 12521542
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 135  Q
    ||||||| ||||||| ||| |||||||||||||||| ||||||| |||||| |||||||||    
T  12521602 cttatgatatgttcataagctgttttcagcttatttccataagctcttcaaaatagcttat 12521542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 32408588 - 32408660
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 147  Q
    |||||||||||| |  |||||| |||| |||||||| ||||||| ||||| ||||||||||||||||| ||||    
T  32408588 cttatgacatgtccgtaagttggtttctgcttatttccataagctcttcaggatagcttatgaaaatagttta 32408660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 33533536 - 33533600
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||| |||| |||||||||||| ||||||| ||||||| || ||||||||||| ||||||    
T  33533536 ttatgacatattcataagttgttttcaacttatttccataagctctccaagatagcttgtgaaaa 33533600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 12467211 - 12467164
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  12467211 acaacttatgacatgtttataagctgttttcagcttattttcataagc 12467164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 25461310 - 25461377
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||||  || ||||||||||||||||||||||  ||  |||||||| |||||||||    
T  25461310 aacttatgacatgttcattagctgttttcagcttattttcataaatacgccaagataggttatgaaaa 25461377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 985689 - 985600
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctta--tgaaaataatttaactttattttatc 160  Q
    |||||||||||||| ||||||  ||||||||||||||| ||||  | ||||| |||||||||  |||||| | ||| |||||||||||||    
T  985689 aacttatgacatgtccacaagcggttttcagcttatttccatagtctcttcatgatagcttatgtgaaaacagtttgactttattttatc 985600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 9202743 - 9202809
Alignment:
Q  75 cttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||| ||||| ||| ||||| |||||||||||||||||  |||||||||| ||||||||||    
T  9202743 cttatgacattgttcataagctgtttccagcttattttcataagttcttcaagataacttatgaaaa 9202809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 499727 - 499768
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataa 116  Q
    ||||||||||||| |||||||||||||||||||||| |||||    
T  499727 cttatgacatgttaacaagttgttttcagcttatttccataa 499768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 2092537 - 2092606
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||| ||||| || |||||||||||| ||| ||||||||| | ||||||||||| | |||||||    
T  2092537 acaacttatggcatgtccataagttgttttcaactttttttcataaacccttcaagatagttaatgaaaa 2092606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 2568732 - 2568667
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||| |||| ||||| |||| ||||||||||||| ||| || || |||||||||||||||    
T  2568732 cttatgacatattcataagttatttttagcttattttcattagctctccatgatagcttatgaaaa 2568667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 7319020 - 7319069
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||| ||||||||||||||||||  || ||||||||||||||||||    
T  7319020 aagttgttctcagcttattttcataagttctccaagatagcttatgaaaa 7319069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 8090014 - 8089957
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagat 128  Q
    ||||||||||| || |||  ||| |||||||||||||||||||||||| |||||||||    
T  8090014 acaacttatgatatattcctaagctgttttcagcttattttcataagctcttcaagat 8089957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 18543193 - 18543257
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| ||  |||||||||||||||| |||||||||| || || |||||||||||||||    
T  18543193 cttatgacatgtccatgagttgttttcagctta-tttcataagctctccaggatagcttatgaaaa 18543257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 18906400 - 18906351
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||||||||||||  ||||||  ||||||||||||||||||||    
T  18906400 aagttgttttcagcttatttcgataagcttttcaagatagcttatgaaaa 18906351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 21768193 - 21768258
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| || | | |||||||| ||||||||| ||||| |||||||||| ||||||||||    
T  21768193 cttatgacatgtccatacgctgttttcaacttattttcgtaagctcttcaagataacttatgaaaa 21768258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 26209409 - 26209474
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||| ||||| |||||| ||||||||| |||||  ||||| ||||||| |||||||||||||||    
T  26209409 cttatggcatgtccacaagctgttttcagattattcgcataaacacttcatgatagcttatgaaaa 26209474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 41957447 - 41957512
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| || |||||||||||| ||||||||||||||  ||  | |||||||||||||||    
T  41957447 cttatgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaa 41957512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 5284445 - 5284509
Alignment:
Q  76 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||| || ||| | |||||||||||||||||| ||| ||||| |||||| ||||||||    
T  5284445 ttatgacatgtccataagcttttttcagcttattttcattagctcttcatgatagcctatgaaaa 5284509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 7985034 - 7984978
Alignment:
Q  84 tgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||| ||| ||||||||||||||||||||||   || ||||||||||||||||||    
T  7985034 tgttcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaa 7984978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 38104869 - 38104917
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 139  Q
    |||||||||||||||||||| ||||||| ||  ||||||||||||||||    
T  38104869 aagttgttttcagcttatttccataagctctctaagatagcttatgaaa 38104917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 38829647 - 38829695
Alignment:
Q  90 caagttgttttcagcttattttcataagcacttcaagatagcttatgaa 138  Q
    |||| ||||||| || ||||||||||||| |||||||||||||||||||    
T  38829647 caagctgttttcggcatattttcataagctcttcaagatagcttatgaa 38829695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 140
Target Start/End: Complemental strand, 3237156 - 3237102
Alignment:
Q  86 ttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||| ||||||| |||||| ||||||||||||| ||| | |||||||||||||||    
T  3237156 ttcataagttgtgttcagcatattttcataagctctttaggatagcttatgaaaa 3237102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 140
Target Start/End: Complemental strand, 7907944 - 7907890
Alignment:
Q  86 ttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||| ||||||||||||||||| |||||||||| || ||||| ||||||| ||||    
T  7907944 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaa 7907890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 137
Target Start/End: Complemental strand, 32545108 - 32545046
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatga 137  Q
    ||||||||||||  ||||  | ||||||| |||||||||||||| || |||||||||||||||    
T  32545108 cttatgacatgtctacaatctattttcagattattttcataagctctccaagatagcttatga 32545046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 39105539 - 39105473
Alignment:
Q  75 cttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||| ||||| ||| | |||| ||||||||||||||||  || ||||||||||||||||||    
T  39105539 cttatgacattgttcataagctatttttagcttattttcataagttctccaagatagcttatgaaaa 39105473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 1899228 - 1899187
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataa 116  Q
    |||||||||||| || |||||||||||||||||||| |||||    
T  1899228 cttatgacatgtgcataagttgttttcagcttatttccataa 1899187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 11700370 - 11700415
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataa 116  Q
    |||||||||||||||| || ||| ||||||||| ||||||||||||    
T  11700370 acaacttatgacatgtccataagctgttttcagattattttcataa 11700415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 12425629 - 12425580
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||| ||||||||||||||  || ||||||||||| ||||||    
T  12425629 aagttgttttcaacttattttcataagttctccaagatagcttgtgaaaa 12425580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 32172731 - 32172662
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||| || |||   |||||||||||||| ||| ||  ||||| |||||||||||||||    
T  32172731 acaacttatgacatgtccataagccattttcagcttatttccattagttcttcatgatagcttatgaaaa 32172662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 32194073 - 32194134
Alignment:
Q  73 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctta 134  Q
    |||||||||||| | || ||||||||||||||||||||  |||||| ||  |||||||||||    
T  32194073 aacttatgacatttccataagttgttttcagcttatttatataagctctcaaagatagctta 32194134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Complemental strand, 32897535 - 32897466
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    ||||||||||| || |||| ||  ||||||| |||||||||||||||| |||  ||||||| ||||||||    
T  32897535 acaacttatgatattttcataacctgttttctgcttattttcataagctctttgagatagcgtatgaaaa 32897466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 118
Target Start/End: Complemental strand, 35963313 - 35963272
Alignment:
Q  77 tatgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    |||||||||| || |||||||||||||||||||| |||||||    
T  35963313 tatgacatgtccataagttgttttcagcttatttccataagc 35963272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 36774703 - 36774788
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 160  Q
    |||||||||||| |  ||| || ||||||||||||| ||||||| || || |||||||||| |||| | ||| ||||| |||||||    
T  36774703 cttatgacatgtcctaaagatggtttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatc 36774788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 39594865 - 39594816
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 140  Q
    |||||||||||||||||||||||||||  |  ||||||| ||||||||||    
T  39594865 aagttgttttcagcttattttcataagttcaacaagatatcttatgaaaa 39594816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 1465032 - 1465076
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttat 135  Q
    ||||||||||||||||||||||| |||  || |||||||||||||    
T  1465032 aagttgttttcagcttattttcacaagtcctccaagatagcttat 1465076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 8177528 - 8177584
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagc 131  Q
    ||||||| |||| || ||||||||||||| |||||||||||||| || || ||||||    
T  8177528 cttatgatatgtccataagttgttttcaggttattttcataagctctccaggatagc 8177584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 10303867 - 10303827
Alignment:
Q  78 atgacatgttcacaagttgttttcagcttattttcataagc 118  Q
    ||||||||| || |||||||| |||||||||||||||||||    
T  10303867 atgacatgtccataagttgttgtcagcttattttcataagc 10303827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 13264101 - 13264172
Alignment:
Q  75 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 147  Q
    |||||| ||| |||| ||| ||||||||||||||||| |||||| ||||| |||||| | |||||||| ||||    
T  13264101 cttatgccatattcataagctgttttcagcttatttt-ataagctcttcatgatagcatgtgaaaatagttta 13264172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 18637039 - 18637083
Alignment:
Q  98 tttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    |||||||||||||||||||   ||||||||||||| |||||||||    
T  18637039 tttcagcttattttcataatatcttcaagatagctaatgaaaata 18637083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 19460405 - 19460449
Alignment:
Q  98 tttcagcttattttcataagcacttcaagatagcttatgaaaata 142  Q
    ||||||||||||||||||||  ||| |||||| ||||||||||||    
T  19460405 tttcagcttattttcataagttcttgaagataacttatgaaaata 19460449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 20028502 - 20028550
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 139  Q
    ||||||||||||||||||||  |||||| |||||  |||||||||||||    
T  20028502 aagttgttttcagcttatttctataagctcttcataatagcttatgaaa 20028550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 29116966 - 29117033
Alignment:
Q  95 tgttttcagcttattttcataagcacttcaagatagcttat--gaaaataatttaactttattttatc 160  Q
    |||||||||||||||| |||||||  |||| ||||||||||  ||||| | ||| |||||||||||||    
T  29116966 tgttttcagcttatttgcataagcttttcaggatagcttatacgaaaacagtttgactttattttatc 29117033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 4927 - 4991
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 135  Q
    ||||||||| ||||||||| |||||||||||||||||  | ||||||| || |||| ||||||||    
T  4927 acaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 4991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 12696 - 12758
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctt 133  Q
    |||||||||||||||| || |||||||||||||||||  | ||||||| ||  ||||||||||    
T  12696 acaacttatgacatgtccataagttgttttcagcttagctccataagctctctaagatagctt 12758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 33639 - 33687
Alignment:
Q  91 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 139  Q
    |||||||||||||||||||| ||||||| |||||  |||||||||||||    
T  33639 aagttgttttcagcttatttccataagctcttcataatagcttatgaaa 33687  T

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Target: scaffold0311 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 10609 - 10664
Alignment:
Q  71 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaag 126  Q
    |||||| ||||||||| || |||||||||||||||||||| ||||| |||| ||||    
T  10609 acaactaatgacatgtccataagttgttttcagcttatttccataaacactacaag 10664  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 14666 - 14614
Alignment:
Q  93 gttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatt 145  Q
    ||||||||||||||||||| |||| | ||||||||||  |||| |||||||||    
T  14666 gttgttttcagcttatttttataaactcttcaagatattttataaaaataatt 14614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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