View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6225_low_20 (Length: 238)
Name: NF6225_low_20
Description: NF6225
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6225_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 23147541 - 23147347
Alignment:
| Q |
1 |
ttaaaaagctaggtttatatttttaaaaattgaaatgataatatgagaaatgatcacaatgctcgaaccacattaatccatttttaaaaatactttatag |
100 |
Q |
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| T |
23147541 |
ttaaaaagctaggtttatatttttaaaaattgaaatgataatatgagaaatgatcacaatactcgaaccacattaatccatttttaaaaatactttatag |
23147442 |
T |
|
| Q |
101 |
cgcctgtaa-tttgnnnnnnnnnnnnnntcaacttttccctccaaaatcttgtatctaaatataccatagattattttttgtagtgatcggggtt |
194 |
Q |
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||||||||| ||| ||||||||||| |||||||||||| |||||||||| |||||||||||||||||||| ||||||| |
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| T |
23147441 |
cgcctgtaattttaaaaaaaaaaaaaaaaaaacttttccctataaaatcttgtatttaaatataccctagattattttttgtagtgaccggggtt |
23147347 |
T |
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