View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6226_high_3 (Length: 315)
Name: NF6226_high_3
Description: NF6226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6226_high_3 |
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Alignment Details
Target: chr6 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 26 - 305
Target Start/End: Original strand, 2353641 - 2353920
Alignment:
| Q |
26 |
aaaaaatcatggcagtttaggaagtgttttccaatagacattacacctattgaaagtaaatataaaattgcccaaagcataatgtagggcctatcttaat |
125 |
Q |
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||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
2353641 |
aaaaaatcatggcagtttaggaaatgttttccaatagatattacacctattgaaagtaaatataaaattgcccaaagcataatgtagggcctattttaat |
2353740 |
T |
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| Q |
126 |
ttggttaaaaactgagaaaattgctatttaggcattttggattgctcacaagtgcctcaaatttctgaaaatatttccatttgtagttaactactgttta |
225 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
2353741 |
ttggttaaaaaccgagaaaattgctatttaggcattttggattgctcacaagtacctcaaatttctaaaaatatttccatttgtagttaactactgttta |
2353840 |
T |
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| Q |
226 |
ttgctacatggtgttaggaatcgttcactttttaattcggtaattttgattaactgagctaaaaaggtctacctcatgtt |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2353841 |
ttgctacatggtgttaggaatcgttcactttttaattcggtaattttgattaactgagctaaaaaggtctacctcatgtt |
2353920 |
T |
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