View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6227_low_18 (Length: 335)

Name: NF6227_low_18
Description: NF6227
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6227_low_18
NF6227_low_18
[»] chr5 (27 HSPs)
chr5 (155-318)||(41616477-41616640)
chr5 (155-318)||(14088162-14088324)
chr5 (154-313)||(15719238-15719397)
chr5 (155-318)||(14645209-14645371)
chr5 (158-314)||(14087560-14087716)
chr5 (155-318)||(7977924-7978087)
chr5 (155-318)||(29455684-29455847)
chr5 (152-318)||(22632296-22632461)
chr5 (156-318)||(31149746-31149909)
chr5 (155-313)||(6224889-6225047)
chr5 (155-318)||(15674031-15674193)
chr5 (155-318)||(1060849-1061004)
chr5 (155-318)||(41983140-41983304)
chr5 (155-318)||(33347127-33347290)
chr5 (164-269)||(4572170-4572276)
chr5 (155-318)||(4901992-4902155)
chr5 (155-318)||(19254539-19254702)
chr5 (154-233)||(32302295-32302374)
chr5 (155-266)||(41692571-41692682)
chr5 (155-308)||(639423-639576)
chr5 (155-318)||(35935205-35935362)
chr5 (155-318)||(16186661-16186824)
chr5 (155-266)||(34718887-34718998)
chr5 (165-318)||(19549253-19549406)
chr5 (170-318)||(10937329-10937477)
chr5 (175-226)||(15023458-15023509)
chr5 (249-318)||(32302376-32302445)
[»] chr1 (47 HSPs)
chr1 (155-318)||(13312625-13312788)
chr1 (155-318)||(42069170-42069333)
chr1 (155-318)||(35978562-35978724)
chr1 (154-318)||(28220859-28221023)
chr1 (154-318)||(48964426-48964590)
chr1 (155-318)||(25815379-25815542)
chr1 (155-318)||(2978311-2978474)
chr1 (154-318)||(9222134-9222298)
chr1 (155-318)||(44327982-44328140)
chr1 (155-318)||(19996728-19996891)
chr1 (154-318)||(48796428-48796592)
chr1 (155-318)||(19506275-19506438)
chr1 (175-269)||(27783426-27783521)
chr1 (154-315)||(31646354-31646515)
chr1 (153-306)||(43634704-43634856)
chr1 (154-318)||(2975297-2975461)
chr1 (159-267)||(424465-424575)
chr1 (154-269)||(12560672-12560786)
chr1 (155-318)||(29054658-29054821)
chr1 (156-318)||(7842460-7842621)
chr1 (158-318)||(2501468-2501628)
chr1 (175-318)||(945392-945535)
chr1 (155-233)||(33794527-33794605)
chr1 (155-268)||(8981661-8981774)
chr1 (159-268)||(21260837-21260946)
chr1 (155-266)||(4893397-4893508)
chr1 (155-266)||(20414860-20414971)
chr1 (155-266)||(29184979-29185090)
chr1 (156-318)||(10786110-10786272)
chr1 (155-233)||(22580204-22580282)
chr1 (154-268)||(35739114-35739228)
chr1 (155-318)||(2433153-2433317)
chr1 (155-266)||(33363000-33363111)
chr1 (155-318)||(39026633-39026796)
chr1 (155-318)||(48662550-48662712)
chr1 (155-308)||(40094572-40094725)
chr1 (176-308)||(4052428-4052560)
chr1 (175-318)||(47662187-47662330)
chr1 (155-233)||(29426439-29426516)
chr1 (155-233)||(32133391-32133469)
chr1 (155-208)||(25058993-25059046)
chr1 (155-268)||(48514324-48514437)
chr1 (155-190)||(28192650-28192685)
chr1 (155-226)||(30489558-30489629)
chr1 (175-313)||(38491331-38491469)
chr1 (156-268)||(14106213-14106325)
chr1 (155-227)||(35949732-35949804)
[»] chr3 (35 HSPs)
chr3 (155-318)||(44792699-44792862)
chr3 (155-318)||(49359850-49360013)
chr3 (155-308)||(50481130-50481283)
chr3 (155-318)||(24987463-24987626)
chr3 (154-318)||(19618572-19618736)
chr3 (155-318)||(5041110-5041273)
chr3 (154-318)||(23299577-23299741)
chr3 (155-318)||(39352354-39352512)
chr3 (175-318)||(13735683-13735827)
chr3 (155-318)||(25467374-25467537)
chr3 (155-318)||(45079262-45079425)
chr3 (175-318)||(41923877-41924020)
chr3 (155-268)||(5908119-5908232)
chr3 (153-268)||(30248160-30248275)
chr3 (157-268)||(40563829-40563940)
chr3 (155-318)||(49374681-49374844)
chr3 (212-318)||(6408519-6408625)
chr3 (150-268)||(27064075-27064193)
chr3 (155-268)||(10085367-10085480)
chr3 (155-268)||(10192287-10192400)
chr3 (149-318)||(32995116-32995285)
chr3 (154-266)||(43657156-43657267)
chr3 (155-318)||(42096799-42096962)
chr3 (154-233)||(48079961-48080040)
chr3 (155-268)||(41410364-41410477)
chr3 (175-318)||(19873001-19873144)
chr3 (159-225)||(36691993-36692058)
chr3 (155-268)||(19454673-19454786)
chr3 (175-318)||(38694870-38695013)
chr3 (154-308)||(46819047-46819201)
chr3 (155-210)||(11671723-11671778)
chr3 (178-228)||(39961414-39961464)
chr3 (164-274)||(46584574-46584684)
chr3 (157-266)||(33099536-33099645)
chr3 (182-318)||(51055374-51055510)
[»] chr7 (35 HSPs)
chr7 (155-318)||(19804937-19805100)
chr7 (155-318)||(16567466-16567629)
chr7 (155-318)||(16598033-16598196)
chr7 (155-318)||(46181112-46181275)
chr7 (155-319)||(5023243-5023405)
chr7 (155-318)||(10066311-10066474)
chr7 (159-318)||(27398483-27398642)
chr7 (159-263)||(39414481-39414585)
chr7 (156-318)||(1876095-1876257)
chr7 (155-313)||(46782987-46783133)
chr7 (155-318)||(28067323-28067486)
chr7 (158-233)||(35092850-35092925)
chr7 (155-318)||(43224223-43224380)
chr7 (154-268)||(9355264-9355378)
chr7 (155-313)||(33067525-33067683)
chr7 (154-271)||(31454796-31454913)
chr7 (155-315)||(44300612-44300772)
chr7 (155-313)||(9223541-9223699)
chr7 (150-268)||(25309615-25309733)
chr7 (155-266)||(9477558-9477669)
chr7 (155-266)||(17172323-17172434)
chr7 (154-268)||(42284403-42284517)
chr7 (155-268)||(48558786-48558899)
chr7 (154-318)||(36074176-36074340)
chr7 (155-269)||(3362854-3362969)
chr7 (156-265)||(26299053-26299162)
chr7 (155-224)||(43702548-43702617)
chr7 (164-318)||(30738686-30738834)
chr7 (164-262)||(3551641-3551739)
chr7 (159-233)||(5924195-5924269)
chr7 (155-233)||(21916241-21916319)
chr7 (180-224)||(4912818-4912863)
chr7 (201-318)||(34152409-34152526)
chr7 (201-318)||(34174598-34174715)
chr7 (164-236)||(2959855-2959927)
[»] chr4 (47 HSPs)
chr4 (155-318)||(3387261-3387424)
chr4 (159-318)||(12185685-12185844)
chr4 (159-318)||(12187677-12187836)
chr4 (155-318)||(42755243-42755406)
chr4 (154-318)||(14576693-14576857)
chr4 (154-318)||(2225002-2225168)
chr4 (155-318)||(42053313-42053476)
chr4 (155-318)||(21075732-21075895)
chr4 (155-318)||(29149061-29149224)
chr4 (155-318)||(32655567-32655730)
chr4 (155-318)||(52180823-52180986)
chr4 (155-313)||(54932778-54932936)
chr4 (175-318)||(52595467-52595610)
chr4 (175-313)||(23147336-23147474)
chr4 (155-318)||(1758025-1758188)
chr4 (155-318)||(11034598-11034761)
chr4 (155-318)||(25938267-25938430)
chr4 (155-318)||(34459676-34459839)
chr4 (155-268)||(29994222-29994335)
chr4 (155-318)||(29405918-29406081)
chr4 (155-269)||(8065867-8065981)
chr4 (155-318)||(2721278-2721441)
chr4 (175-318)||(38000519-38000657)
chr4 (158-318)||(45097467-45097627)
chr4 (203-318)||(652195-652310)
chr4 (157-308)||(27586639-27586790)
chr4 (158-241)||(54979262-54979347)
chr4 (151-268)||(28234267-28234384)
chr4 (155-233)||(22829652-22829730)
chr4 (158-283)||(46080623-46080748)
chr4 (175-306)||(21245761-21245893)
chr4 (157-268)||(2073707-2073818)
chr4 (155-266)||(53140513-53140624)
chr4 (157-269)||(3098010-3098123)
chr4 (165-318)||(39804183-39804335)
chr4 (155-268)||(46258070-46258183)
chr4 (175-318)||(22313400-22313543)
chr4 (162-268)||(9608879-9608984)
chr4 (230-308)||(14595277-14595355)
chr4 (165-225)||(4757063-4757123)
chr4 (154-226)||(26340384-26340456)
chr4 (155-231)||(31786322-31786398)
chr4 (155-266)||(52802362-52802474)
chr4 (155-201)||(41003254-41003299)
chr4 (155-209)||(44293140-44293194)
chr4 (175-268)||(33983059-33983152)
chr4 (156-268)||(7261926-7262037)
[»] chr2 (24 HSPs)
chr2 (156-318)||(31440688-31440850)
chr2 (155-318)||(25424643-25424806)
chr2 (155-318)||(33867598-33867761)
chr2 (155-318)||(38620281-38620444)
chr2 (155-313)||(44070462-44070621)
chr2 (165-318)||(3329090-3329243)
chr2 (155-318)||(32422793-32422956)
chr2 (155-318)||(4480951-4481108)
chr2 (155-318)||(23231626-23231783)
chr2 (155-318)||(668023-668186)
chr2 (155-313)||(20936936-20937092)
chr2 (155-318)||(30241331-30241481)
chr2 (155-318)||(41935577-41935740)
chr2 (154-318)||(9205066-9205230)
chr2 (155-318)||(35048513-35048675)
chr2 (155-268)||(11788513-11788626)
chr2 (155-266)||(4289529-4289640)
chr2 (177-318)||(4592246-4592388)
chr2 (164-318)||(29546148-29546302)
chr2 (155-268)||(15234199-15234312)
chr2 (154-233)||(18974604-18974683)
chr2 (155-225)||(16711489-16711559)
chr2 (194-318)||(13142624-13142748)
chr2 (155-233)||(25667356-25667434)
[»] chr8 (24 HSPs)
chr8 (155-318)||(1376078-1376241)
chr8 (156-318)||(24789406-24789568)
chr8 (156-307)||(3616928-3617079)
chr8 (155-307)||(37226836-37226988)
chr8 (175-318)||(2621013-2621156)
chr8 (155-317)||(2472334-2472496)
chr8 (155-318)||(7579950-7580113)
chr8 (155-318)||(19643566-19643729)
chr8 (155-315)||(20216100-20216260)
chr8 (155-315)||(20235698-20235858)
chr8 (155-318)||(24891470-24891634)
chr8 (155-232)||(1667161-1667238)
chr8 (154-307)||(7057497-7057650)
chr8 (173-318)||(25500057-25500202)
chr8 (154-318)||(221874-222039)
chr8 (154-318)||(691029-691194)
chr8 (154-318)||(735497-735662)
chr8 (154-318)||(859393-859558)
chr8 (155-318)||(6109515-6109678)
chr8 (155-262)||(30801140-30801248)
chr8 (157-268)||(43239077-43239188)
chr8 (249-318)||(1667243-1667312)
chr8 (155-268)||(39221649-39221762)
chr8 (155-239)||(38546829-38546913)
[»] scaffold0005 (2 HSPs)
scaffold0005 (154-318)||(240518-240682)
scaffold0005 (230-308)||(222023-222101)
[»] chr6 (14 HSPs)
chr6 (155-318)||(1329609-1329772)
chr6 (153-318)||(20691636-20691801)
chr6 (154-318)||(13534239-13534404)
chr6 (155-313)||(31784025-31784183)
chr6 (154-314)||(6337132-6337292)
chr6 (154-269)||(33331499-33331614)
chr6 (155-318)||(31070696-31070859)
chr6 (153-318)||(33328486-33328651)
chr6 (175-313)||(29641505-29641643)
chr6 (156-233)||(6937957-6938034)
chr6 (155-318)||(9062193-9062357)
chr6 (155-266)||(24447224-24447335)
chr6 (155-266)||(1221813-1221924)
chr6 (175-269)||(31511727-31511822)
[»] scaffold0160 (1 HSPs)
scaffold0160 (151-268)||(26228-26345)
[»] scaffold0312 (1 HSPs)
scaffold0312 (159-267)||(5974-6084)
[»] scaffold0164 (2 HSPs)
scaffold0164 (203-312)||(7154-7263)
scaffold0164 (203-312)||(15035-15144)
[»] scaffold0024 (1 HSPs)
scaffold0024 (155-268)||(110107-110219)
[»] scaffold0242 (2 HSPs)
scaffold0242 (157-313)||(13129-13285)
scaffold0242 (157-313)||(21964-22120)
[»] scaffold0230 (1 HSPs)
scaffold0230 (155-266)||(26528-26639)
[»] scaffold0056 (1 HSPs)
scaffold0056 (154-210)||(72747-72803)


Alignment Details
Target: chr5 (Bit Score: 104; Significance: 8e-52; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 41616477 - 41616640
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    ||||||||||||||||||| |||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||     
T  41616477 tagggatgacaatgggtacccaataggtagggtactacaatgcccgtccccatacccgcatttataaaaaatacccgtatccgtgcccgtaccctcgtgg 41616576  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | |||| |||||| ||| | ||| |||||||||||||| |||||||||    
T  41616577 gcaacaactttagtccccttctccataccctatgggtacttaagtgcccatacccgcacccatt 41616640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 14088162 - 14088324
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||| ||||      
T  14088162 tagggatgacaatgggtacccaatgggtagggtactacagtgcccgtccccatacccgcatttataaaaaatacccgtacccgtgcccgtaccctcgtag 14088261  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | |||  |||||| || || |||||||||||||||||| | |||||||    
T  14088262 gcaacaactttagtccccttccccatacccta-tggtacctaagtgcccatacccgtacccatt 14088324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 154 - 313
Target Start/End: Complemental strand, 15719397 - 15719238
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    ||||||||| |||||||||| ||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||| ||||||| ||||| |||||    
T  15719397 atagggatggcaatgggtacccaatgggtagggtactacaatgcccgtccccataaccgcatttataaaaaatacccgtacccgtgcccgtaccctcgtg 15719298  T
Q  254 agcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcac 313  Q
     ||||||||||||||| | |||  |||||| ||| | ||| |||||||||||||| ||||    
T  15719297 ggcaacaactttagtccccttcctcataccctatgggtacttaagtgcccatacccgcac 15719238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 14645209 - 14645371
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||| ||||||| ||||| |||||     
T  14645209 tagggatggcaatgggtacccaatgggtagggtactacaatgcccgtccc-atacccgcatttataaaaaatacccgtacccgtgcccgtaccctcgtgg 14645307  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | | |  |||||| ||| | ||| |||||| ||||||| |||||||||    
T  14645308 gcaacaactttagtcccctcccccataccctatgggtacttaagtgtccatacccgcacccatt 14645371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 158 - 314
Target Start/End: Original strand, 14087560 - 14087716
Alignment:
Q  158 ggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagca 257  Q
    ||||| |||||||||| ||||||||||||||||||| ||||| |||||||||| |||||| |||||| || ||||| ||||||| ||||| ||||| |||    
T  14087560 ggatggcaatgggtacccaatgggtagggtactacaatgcccatccccatacccgcatttttaaaaattatccgtacccgtgcccgtaccctcgtgggca 14087659  T
Q  258 acaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacc 314  Q
    |||||||||||  | |||  |||||| ||| | || ||||||||||||||| |||||    
T  14087660 acaactttagtgcctttccccataccctatgggtatctaagtgcccatacccgcacc 14087716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 7977924 - 7978087
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||| ||| ||||||||||||||||||| ||||| ||| |||||| |||||| |||||| |||||||| ||||| | ||||| |||||     
T  7977924 tagggatggcaatggttacccaatgggtagggtactacaatgcccatcctcatacctgcatttttaaaaattacccgtacccgtgtccgtaccctcgtgg 7978023  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||  | |||  |||||| ||| | || |||||||| |||||| |||||||||    
T  7978024 gcaacaactttagtgcccttccccataccctatgggtatctaagtgctcatacccgcacccatt 7978087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 29455684 - 29455847
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| ||||||| |  ||||||||||||||||| | || || |||||||||| |||||| |||||| |||||||| ||||| | ||||| |||||     
T  29455684 tagggatggcaatgggcatccaatgggtagggtactataatgtccatccccatacccgcatttttaaaaattacccgtacccgtgtccgtaccctcgtgg 29455783  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||  | |||  |||||||||| | || ||||||||||||||| |||||||||    
T  29455784 gcaacaactttagtgcccttccccataccttatgggtatctaagtgcccatacccgcacccatt 29455847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 318
Target Start/End: Complemental strand, 22632461 - 22632296
Alignment:
Q  152 acatagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcg 251  Q
    ||||||||||| |||| | ||| ||||||||||||||||||| ||||| |||||||||  |||||| |||||| |||| ||||||||||| ||||| |||    
T  22632461 acatagggatggcaatag-tacccaatgggtagggtactacaatgcccatccccatactcgcatttgtaaaaattacctgtatccgtgcccgtaccttcg 22632363  T
Q  252 tgagcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    |   |||||||||||||  |||||  |||||||||| | ||||||||||  ||||||||||| ||||    
T  22632362 tatacaacaactttagtgccattccccataccttatgggtacctaagtgatcatacctgcactcatt 22632296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 156 - 318
Target Start/End: Complemental strand, 31149909 - 31149746
Alignment:
Q  156 agggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgag 255  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||| |||||||||| |||||| |||||| || |||||  |||| ||||||| ||||| |    
T  31149909 agggatggcaatgggtacccaatgggtagggtactacactgcccatccccatacccgcatttttaaaaattatccgtactcgtgtctgtaccctcgtggg 31149810  T
Q  256 caacaactttagtctcattctgcataccttattgatacctaagtgcc-catacctgcacccatt 318  Q
    |||| |||||||| || |||  |||||| ||| | || |||||||||  ||||| |||||||||    
T  31149809 caacgactttagtgtccttccccataccctatgggtatctaagtgccttatacccgcacccatt 31149746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 155 - 313
Target Start/End: Complemental strand, 6225047 - 6224889
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    ||||||||||||||||||   |||||||||||||||||| ||||| |||||||||| |||||| |||||| ||| |||| ||||||| ||||| || ||     
T  6225047 tagggatgacaatgggtatctaatgggtagggtactacaatgcccatccccatacccgcatttttaaaaattactcgtacccgtgcccgtaccctcatgg 6224948  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcac 313  Q
    ||||||||||||||  | |||  |||||| ||| | || | ||||||||||||| ||||    
T  6224947 gcaacaactttagtgcccttccccataccctatgggtatccaagtgcccatacccgcac 6224889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 15674193 - 15674031
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    ||||||||||||||||||  ||||||| ||||||||| ||| ||| |||||||||| || ||| ||||||||||||||| ||| ||| ||||| |||||     
T  15674193 tagggatgacaatgggtatccaatgggcagggtactatagtacccatccccatacccgcgtttgtaaaaaatacccgtacccgggcccgtaccctcgtgg 15674094  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||| ||  | |||  |||||| ||| |  ||||||||| ||||||| |||||||||    
T  15674093 gcaacaactttcgtgcccttc-ccataccctatgggcacctaagtgtccatacccgcacccatt 15674031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 1060849 - 1061004
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||||  ||||||||||||| |||||| |||||  |||||||||||||||||      ||||||| ||||| |||||     
T  1060849 tagggatggcaatgggtacccaatggg--gggtactacagtgtccgtcctcatactcgcatttataaaaaatac------ccgtgcccgtaccctcgtgg 1060940  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | |||  |||| | ||| | ||||||| |||||||||| |||||||||    
T  1060941 gcaacaactttagtccccttccccatatcctatgggtacctaattgcccatacccgcacccatt 1061004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 41983140 - 41983304
Alignment:
Q  155 tagggatgacaatgggtactc-aatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    |||||||| ||| |||||| | |||||||||||||||||| ||||| ||| ||||||  ||||| |||||| |||||||||  ||||  ||||| |||||    
T  41983140 tagggatggcaacgggtaccccaatgggtagggtactacaatgcccatcctcataccctcatttgtaaaaattacccgtatatgtgctcgtaccctcgtg 41983239  T
Q  254 agcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
     |||||||||||||| |||||    || |  ||| | ||||||||||| ||||||||||||||||    
T  41983240 ggcaacaactttagtgtcatttcctatgctctatgggtacctaagtgctcatacctgcacccatt 41983304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 33347290 - 33347127
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||| ||||||||| ||| ||| |||||||| | || ||| |||||||||  |||| ||| ||| ||||| |||||     
T  33347290 tagggatggcaatgggtacccaatgggcagggtactatagtacccatccccatatccgcgtttgtaaaaaatattcgtacccgggcccgtaccctcgtgg 33347191  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||| ||  | |||  |||||| ||| |  ||||||||| ||||||| |||||||||    
T  33347190 gcaacaactttcgtgcccttccccataccctatgggcacctaagtgtccatacccgcacccatt 33347127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 4572170 - 4572276
Alignment:
Q  164 caatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttat-aaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaac 262  Q
    |||||| ||| |||| |||||||||| |||||||||||||||||||| |||||||| |||||||| ||||| ||||| | ||| | ||||| ||||||||    
T  4572170 caatggctacccaataggtagggtacaacagtgcccgtccccatacctgcatttataaaaaaatatccgtacccgtgtccgtatcctcgtgggcaacaac 4572269  T
Q  263 tttagtc 269  Q
    | |||||    
T  4572270 tgtagtc 4572276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 4902155 - 4901992
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| ||||||| || ||||| ||||||||||| ||| | | |||||||||| || ||| ||||||||  | ||| ||||| | ||||| |||||     
T  4902155 tagggatggcaatgggcacccaatgagtagggtactatagtactcatccccatacccgcgtttgtaaaaaatgtctgtacccgtgtccgtaccctcgtgg 4902056  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    | ||||||||||||  | |||  |||||| ||| |  ||||||||||||||||| |||||||||    
T  4902055 gtaacaactttagtgcccttccccataccctatgggcacctaagtgcccatacccgcacccatt 4901992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 19254702 - 19254539
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||||||||||||||  ||||| |||||||||| |||  || ||||||||||  ||||| |||||||| |||||| ||  ||| ||||| |||||     
T  19254702 tagggatgacaatgggtacctaatggatagggtactatagtatccatccccataccctcatttgtaaaaaatgcccgtacccaagcccgtaccctcgtgg 19254603  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
     |||||||||||||  | |||  |||||| |||    || |||||||||||||| |||||||||    
T  19254602 acaacaactttagtgcccttccccataccctatgagcacttaagtgcccatacccgcacccatt 19254539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 32302295 - 32302374
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgta 233  Q
    |||||||||||||||| ||| ||||||||||||||||| |||  || |||||||||| || ||| |||||||| ||||||    
T  32302295 atagggatgacaatggatacccaatgggtagggtactatagtatccatccccatacccgcgtttgtaaaaaatgcccgta 32302374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 266
Target Start/End: Complemental strand, 41692682 - 41692571
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||| |||||||||| |||  || ||||||||||  ||||| ||||||||  ||||| |||  || ||||| |||||     
T  41692682 tagggatggcaatgggtacccaatggatagggtactatagtatccatccccataccctcatttgtaaaaaatgtccgtacccgaacccgtaccctcgtgg 41692583  T
Q  255 gcaacaacttta 266  Q
    ||||||||||||    
T  41692582 gcaacaacttta 41692571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 308
Target Start/End: Complemental strand, 639576 - 639423
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||| ||||||||||| ||| ||| | ||| ||| |||  ||| | || ||| ||||||||||| ||||||| |   ||||| |||||     
T  639576 tagggatggcaatggatactcaatgggcaggatacaatagtacccatccttatatccgcgtttgtaaaaaatacctgtatccgagttcgtaccctcgtgg 639477  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacc 308  Q
    |||||||||||||| || |||  |||||| ||| | ||| ||||||||||||||    
T  639476 gcaacaactttagtgtctttccccataccctatgggtacttaagtgcccatacc 639423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 35935205 - 35935362
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    ||||||||||||||||||  ||||||| ||||||||| | | ||| ||| ||||||  | ||| ||||||||||      ||| ||| ||||| |||||     
T  35935205 tagggatgacaatgggtatccaatgggcagggtactatactacccatcctcatacccacgtttgtaaaaaatac------ccgggcccgtaccctcgtgg 35935298  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||  | |||| |||||| ||  |  ||||||||||||||||| |||||||||    
T  35935299 gcaacaactttagtgcccttctccataccctacgggcacctaagtgcccatacccgcacccatt 35935362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 16186661 - 16186824
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||  ||||||| ||||||| | |||   | || ||||| | || ||| |||||||||||||||  ||   ||||||| ||||||    
T  16186661 tagggatggcaatgggtatccaatgggaagggtacaatagtattcatctccatatccgcgtttgtaaaaaatacccgtactcgaatctgtaccctcgtga 16186760  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||  | |||  ||||| |||| | ||| |||||||||||||  |||||||||    
T  16186761 gcaacaactttagttcctttccacatactttatgggtacttaagtgcccatacacgcacccatt 16186824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 266
Target Start/End: Complemental strand, 34718998 - 34718887
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||| |||||||||| |||  || ||||||||||  ||||| ||||||||  ||||  ||| ||| ||||| |||||     
T  34718998 tagggatggcaatgggtacccaatggatagggtactatagtatccatccccataccctcatttgtaaaaaatgtccgtccccgagcccgtaccctcgtgg 34718899  T
Q  255 gcaacaacttta 266  Q
     |||||||||||    
T  34718898 acaacaacttta 34718887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 318
Target Start/End: Original strand, 19549253 - 19549406
Alignment:
Q  165 aatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactt 264  Q
    ||||||||| ||||||||||||||||| ||| ||| ||||||||||  | ||| |||| ||| |  ||||||| ||  |||||  |||| ||||||||||    
T  19549253 aatgggtacccaatgggtagggtactatagtacccttccccatacccacgtttgtaaagaatgcatgtatccgagctcgtacccacgtgggcaacaactt 19549352  T
Q  265 tagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    | || || |||  ||||||  || | ||||||||| ||||||||  ||||||||    
T  19549353 tggtatccttccccataccccatgggtacctaagtacccatacccacacccatt 19549406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 318
Target Start/End: Original strand, 10937329 - 10937477
Alignment:
Q  170 gtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtc 269  Q
    |||| ||||| ||||||||||  ||| ||| |||||||||| |  ||| |||||||| |||||| ||| |||  |||| ||||| | ||||||||||||     
T  10937329 gtacccaatgagtagggtactgtagtacccttccccatacccgtgtttgtaaaaaatgcccgtacccgagcccataccctcgtgggtaacaactttagtg 10937428  T
Q  270 tcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
     | |||  |||||| ||| |  ||||||||||||||||| | |||||||    
T  10937429 cccttccccataccctatgggcacctaagtgcccatacccgtacccatt 10937477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 15023509 - 15023458
Alignment:
Q  175 caatgggtagggtactacagtgcccgtccccataccggcatttataaaaaat 226  Q
    ||||||| ||||||||| | ||||||||||||||||||| ||| ||||||||    
T  15023509 caatgggcagggtactataatgcccgtccccataccggcgtttgtaaaaaat 15023458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 318
Target Start/End: Original strand, 32302376 - 32302445
Alignment:
Q  249 tcgtgagcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||| |||||||||||||| || |||  |||||||||| |  || |||||||||||||| |||||||||    
T  32302376 tcgtgggcaacaactttagtgtccttccccataccttatgggcacttaagtgcccatacccgcacccatt 32302445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 2e-49; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 13312625 - 13312788
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||    
T  13312625 tagggatggcaatgggtacccaatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaatacccgtatccgtgcccgtaccctcgtga 13312724  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | |||  |||||| ||| | ||| ||||| |||||||| |||||||||    
T  13312725 gcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccgcacccatt 13312788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 42069333 - 42069170
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||| |||||     
T  42069333 tagggatggcaatgggtgcccaatgggtagggtactacagtgcccgtccccatacccgcatttataaaaaatacccgtacccgtgcccgtaccctcgtgg 42069234  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | |||  |||||| ||| | || ||||||||||||||| |||||||||    
T  42069233 gcaacaactttagtccccttccccataccctatgggtatctaagtgcccatacccgcacccatt 42069170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 35978724 - 35978562
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||| | ||||| ||  |     
T  35978724 tagggatggcaatgggtacccaatgggtagggtactacagtgcccgtccccatacccacatttataaaaaatacccgtacccgtgtccgtacc-tcaagg 35978626  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | |||  |||||| ||| | |||||||||||||||||| |||||||||    
T  35978625 gcaacaactttagtccccttccccataccctatgggtacctaagtgcccatacccgcacccatt 35978562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 154 - 318
Target Start/End: Original strand, 28220859 - 28221023
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    ||||||||| |||||||||| ||||||||||||||||||| ||||| |||||||||| |||||| |||||| |||||||||||||||| ||||| |||||    
T  28220859 atagggatggcaatgggtacccaatgggtagggtactacaatgcccatccccatacccgcatttttaaaaattacccgtatccgtgcccgtaccctcgtg 28220958  T
Q  254 agcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
     ||||||||||||||  | ||   |||||| ||| | || ||||||||||||||| |||||||||    
T  28220959 ggcaacaactttagtgccctttcccataccctatgggtatctaagtgcccatacccgcacccatt 28221023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 154 - 318
Target Start/End: Complemental strand, 48964590 - 48964426
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    ||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||  || |||| ||| | |||||    
T  48964590 atagggatggcaatgggtacccaatgggtagggtactacagtgcctgtccccatacccgcatttataaaaaatacccgtgcccttgcccgtatcctcgtg 48964491  T
Q  254 agcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
     ||||||||||||||| | |||  |||||  ||| | ||||| |||||||||||| |||||||||    
T  48964490 ggcaacaactttagtccccttccccatactctatgggtacctcagtgcccatacccgcacccatt 48964426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 25815542 - 25815379
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||| |||||||  |||| |||||     
T  25815542 tagggatggcaatgggtacccaatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaatatccgtacccgtgcccataccctcgtgg 25815443  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||| ||| | |||  |||||| ||| | ||| ||||| |||||||| |||||||||    
T  25815442 gcaacaactttggtccccttccccataccctatgggtacttaagtacccatacccgcacccatt 25815379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 2978311 - 2978474
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||| |||||||||| |||||| |||||| |||||||| ||||| ||||||| | |||     
T  2978311 tagggatggcaatgggtacccaatgggtagggtactacaatgcccatccccatacccgcatttttaaaaattacccgtacccgtgtctgtacccttgtgg 2978410  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||  | |||  |||||| ||| | || ||||||||||||||| |||| ||||    
T  2978411 gcaacaactttagtgcccttccccataccctatgggtatctaagtgcccatacccgcacacatt 2978474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 154 - 318
Target Start/End: Original strand, 9222134 - 9222298
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    ||||||||| |||||||||  ||||||||||||||||||| |||||||||||||||| ||||||| |||||||| ||||| |||||   ||||| |||||    
T  9222134 atagggatggcaatgggtatccaatgggtagggtactacaatgcccgtccccatacccgcatttacaaaaaatatccgtacccgtgttcgtaccctcgtg 9222233  T
Q  254 agcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
     ||||||||||||||| | |||  |||||| ||| | ||| ||||| ||||||||  ||||||||    
T  9222234 ggcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccacacccatt 9222298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 44328140 - 44327982
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataa-aaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    ||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||| | |||||||| |||||||| |||      || ||||| |||||    
T  44328140 tagggatgacaatgggtacccaatgggtagagtactacagtgaccgtccccatacccgtatttataaaaaaatacctgta------cccgtaccctcgtg 44328047  T
Q  254 agcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    |||||||||||||||| | |||  |||||| ||| | |||||||||| ||||||| |||||||||    
T  44328046 agcaacaactttagtccccttccccataccctatgggtacctaagtgtccatacccgcacccatt 44327982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 19996891 - 19996728
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||| |||||||| | |||||| |||||| ||| |||| | ||||| ||||| |||||     
T  19996891 tagggatgacaatgggtgcccaatgggtagggtactacaatgcccatccccatatccgcatttgtaaaaattactcgtacctgtgcccgtaccctcgtgg 19996792  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||  | |||  |||||| ||| | || |||||||  |||||| |||||||||    
T  19996791 gcaacaactttagtgcccttccccataccctatgggtatctaagtgttcatacccgcacccatt 19996728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 154 - 318
Target Start/End: Original strand, 48796428 - 48796592
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    |||||||||||||||||||| ||||||| ||||||||| ||| ||| | |||||||| || ||| ||||||||||||||||||| |||  |||| |||||    
T  48796428 atagggatgacaatgggtacccaatgggcagggtactatagtacccattcccatacccgcgtttgtaaaaaatacccgtatccgggcccataccctcgtg 48796527  T
Q  254 agcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
     |||| |||||||||  | |||   ||||| | | |  ||||||||||||||||| |||||||||    
T  48796528 ggcaataactttagtgcccttccctataccctttgggcacctaagtgcccatacccgcacccatt 48796592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 19506275 - 19506438
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||  ||||||||||||||||| | || || |||||||||| | |||| |||||| ||||||||  |||| | ||||| |||||     
T  19506275 tagggatggcaatgggtatccaatgggtagggtactataatgtccatccccatacccgaatttttaaaaattacccgtactcgtgtccgtaccctcgtgg 19506374  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||  | |||  |||||| ||| | || ||||||||||||||| |||||||||    
T  19506375 gcaacaactttagtgcccttccccataccctatgggtatctaagtgcccatacccgcacccatt 19506438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 175 - 269
Target Start/End: Original strand, 27783426 - 27783521
Alignment:
Q  175 caatgggtagggtactacagtgcccgtccccataccggcatttat-aaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtc 269  Q
    ||||||||||| ||||||| ||||||||||||| || |||||||| |||||||||||||| ||||||| ||||| ||||| |||||||||||||||    
T  27783426 caatgggtaggatactacactgcccgtccccatccccgcatttataaaaaaatacccgtacccgtgcccgtaccctcgtgggcaacaactttagtc 27783521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 154 - 315
Target Start/End: Complemental strand, 31646515 - 31646354
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    ||||||||| |||||||||| |||  |||||||||||| ||| ||| || ||||||| || ||| ||||||||||||||| |||  || ||||| |||||    
T  31646515 atagggatggcaatgggtacccaacaggtagggtactatagtacccatctccatacccgcgtttgtaaaaaatacccgtacccggacccgtaccctcgtg 31646416  T
Q  254 agcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcaccc 315  Q
     ||||||||||||||  | |||  |||||| ||| |  ||||||||||||||||| ||||||    
T  31646415 ggcaacaactttagtgcccttccccataccctatgggcacctaagtgcccatacccgcaccc 31646354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 153 - 306
Target Start/End: Complemental strand, 43634856 - 43634704
Alignment:
Q  153 catagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgt 252  Q
    ||||||||||  ||||||| | |||| | ||||||| |||| || ||||| ||||||| |||||||||||||||||||| | | ||||||||||| ||||    
T  43634856 catagggatggtaatgggtgcccaattgatagggtattacaatgtccgtctccatacccgcatttataaaaaatacccgcacctgtgcctgtaccctcgt 43634757  T
Q  253 gagcaacaactttagtctcattctgcataccttattgatacctaagtgcccata 306  Q
    | ||||||||||||||| | |||  |||||| ||| | |||||||||| |||||    
T  43634756 gggcaacaactttagtccccttc-ccataccctatgggtacctaagtgtccata 43634704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 318
Target Start/End: Complemental strand, 2975461 - 2975297
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    |||||||||||||||||||| |||||| ||| |||||||| || || |   |||||| |||||| |||||| |||||||| ||||| ||||||| |||||    
T  2975461 atagggatgacaatgggtacccaatggatagagtactacaatgtccattttcatacccgcatttttaaaaattacccgtacccgtgtctgtaccctcgtg 2975362  T
Q  254 agcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
     ||||||||||||||  | |||  |||||| ||| | || |||||| |||||||| |||| ||||    
T  2975361 ggcaacaactttagtgcccttcgccataccctatgggtatctaagtacccatacccgcacacatt 2975297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 159 - 267
Target Start/End: Original strand, 424465 - 424575
Alignment:
Q  159 gatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttat--aaaaaatacccgtatccgtgcctgtaccatcgtgagc 256  Q
    |||| |||||||||| |||||| |||||||||||| ||||| |||||||  | ||||||||  |||||||||||||| ||||||| ||||| ||||| ||    
T  424465 gatggcaatgggtacccaatggatagggtactacaatgcccttccccatgtccgcatttataaaaaaaatacccgtacccgtgcccgtaccctcgtgggc 424564  T
Q  257 aacaactttag 267  Q
    |||||||||||    
T  424565 aacaactttag 424575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 154 - 269
Target Start/End: Complemental strand, 12560786 - 12560672
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    ||||| || ||||||||||| |||| |||||| ||||| |||||||||||| ||||| |||||||||||||||||||||| ||||| | ||| | || ||    
T  12560786 ataggaataacaatgggtacccaataggtagg-tactatagtgcccgtccctatacccgcatttataaaaaatacccgtacccgtgtccgtatcctcatg 12560688  T
Q  254 agcaacaactttagtc 269  Q
     |||||||||||||||    
T  12560687 ggcaacaactttagtc 12560672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 29054821 - 29054658
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||| ||||||||| || ||||| || ||||||| |||||||||||||||||  ||| |||||   |||   |||||     
T  29054821 tagggatggcaatgggtacccaatggatagggtactgcattgcccatctccatacctgcatttataaaaaatacatgtacccgtgttcgtattctcgtgg 29054722  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||| ||| | |||  |||||| ||| | |||||||||| ||||||| |||||||||    
T  29054721 gcaacaactttggtccccttccccataccctatgggtacctaagtgtccatacccgcacccatt 29054658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 156 - 318
Target Start/End: Original strand, 7842460 - 7842621
Alignment:
Q  156 agggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgag 255  Q
    ||||||| |||||||||| |||||| |||||||||||| ||||| |||||||||| |||| | |||||| ||| ||||  |||||| ||||| ||||| |    
T  7842460 agggatggcaatgggtacccaatggatagggtactacaatgcccatccccatacccgcatctgtaaaaattacacgtactcgtgcccgtacc-tcgtgtg 7842558  T
Q  256 caacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    |||| ||||||||  | |||| |||||  ||| | || ||||||||||||||| |||| ||||    
T  7842559 caactactttagtgcccttctccatactctatgggtatctaagtgcccatacccgcactcatt 7842621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 318
Target Start/End: Original strand, 2501468 - 2501628
Alignment:
Q  158 ggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagca 257  Q
    |||||||||||||||| | ||||||||||||||||||||||| |||||||||  || ||| |||||||||| |||| |||  ||  |||  ||| | |||    
T  2501468 ggatgacaatgggtaccctatgggtagggtactacagtgcccttccccatacacgcgtttgtaaaaaatactcgtacccgatcccatactctcgcgggca 2501567  T
Q  258 acaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||| || |||  ||| |||||| |  |||| || ||||||||| |||||||||    
T  2501568 acaactttagtgtccttccccatcccttatgggcaccttagcgcccatacccgcacccatt 2501628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 318
Target Start/End: Original strand, 945392 - 945535
Alignment:
Q  175 caatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctcatt 274  Q
    ||||||||||||||||||| ||||| |||||||||| | |||| |||||| ||||||||  | |||| ||| | ||||| ||||||||||||||  | ||    
T  945392 caatgggtagggtactacaatgcccatccccatacccgtatttttaaaaattacccgtacacatgcccgtatcctcgtgggcaacaactttagtgccctt 945491  T
Q  275 ctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    |  |||| | ||| | || ||||||||||||||| |||||||||    
T  945492 ccccatatcctatgggtatctaagtgcccatacccgcacccatt 945535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 33794605 - 33794527
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgta 233  Q
    ||||||||||||||| ||| |||||||||||||| |||| | | |||||||||| | ||||||||||||||||||||||    
T  33794605 tagggatgacaatggatacccaatgggtagggtattacacttctcgtccccatatccgcatttataaaaaatacccgta 33794527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 8981774 - 8981661
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    ||||||||||||||||||  ||||||||||||||||| |||  || | |||||||| || ||| ||||||||| |||||  || ||| ||||| |||||     
T  8981774 tagggatgacaatgggtatccaatgggtagggtactatagtatccattcccatacccgcgtttgtaaaaaatatccgtactcgagcccgtaccctcgtgg 8981675  T
Q  255 gcaacaactttagt 268  Q
    ||||||||||||||    
T  8981674 gcaacaactttagt 8981661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 268
Target Start/End: Complemental strand, 21260946 - 21260837
Alignment:
Q  159 gatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaa 258  Q
    |||| ||||||||||  |||||||||||||||||| ||||| |||||||||| |||||| |||||| || | || |||||| |  |||| ||||| ||||    
T  21260946 gatggcaatgggtacctaatgggtagggtactacaatgcccatccccatacccgcatttttaaaaattatcagtgtccgtgtccataccctcgtgggcaa 21260847  T
Q  259 caactttagt 268  Q
    ||||||||||    
T  21260846 caactttagt 21260837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 266
Target Start/End: Complemental strand, 4893508 - 4893397
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||| |||||||||| |||  || ||||||||||  ||||| ||||||||  ||||| ||| ||| ||||| |||||     
T  4893508 tagggatggcaatgggtacccaatggatagggtactatagtatccatccccataccctcatttgtaaaaaatgtccgtacccgagcccgtaccctcgtgg 4893409  T
Q  255 gcaacaacttta 266  Q
    ||||||||||||    
T  4893408 gcaacaacttta 4893397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 266
Target Start/End: Original strand, 20414860 - 20414971
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    ||||||||| ||||| ||  |||||| |||||||||| | | ||| ||||||||||  ||||| |||||||| |||||||||| ||| ||||| |||||     
T  20414860 tagggatgataatggatatccaatggatagggtactataatacccatccccataccctcatttgtaaaaaatgcccgtatccgagcccgtaccctcgtgg 20414959  T
Q  255 gcaacaacttta 266  Q
    ||||||||||||    
T  20414960 gcaacaacttta 20414971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 266
Target Start/End: Original strand, 29184979 - 29185090
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||| |||||||||| |||  || ||||||||||  ||||| ||||||||  ||||| ||| ||| ||||| |||||     
T  29184979 tagggatggcaatgggtacccaatggatagggtactatagtatccatccccataccctcatttgtaaaaaatgtccgtacccgagcccgtaccctcgtgg 29185078  T
Q  255 gcaacaacttta 266  Q
    ||||||||||||    
T  29185079 gcaacaacttta 29185090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 318
Target Start/End: Original strand, 10786110 - 10786272
Alignment:
Q  156 agggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgag 255  Q
    ||||||| |||||||||||| |||| |||||||||||| ||||| ||| | ||||  ||||||||||||||||  |||  || |||  ||   ||||| |    
T  10786110 agggatggcaatgggtactctatggatagggtactacaatgcccttcctcgtaccaacatttataaaaaatacttgtactcgagcccatattctcgtggg 10786209  T
Q  256 caacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||| ||||||| ||||| ||||    |||| ||||| ||||||||||| ||||    
T  10786210 caacaactttagtgtcattctccatactttatgagcaccttagtgctcatacctgcactcatt 10786272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 22580282 - 22580204
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgta 233  Q
    ||||||||||||||||||  | ||||||||||||||||| |||||||||| ||||| |  ||| |||||||||||||||    
T  22580282 tagggatgacaatgggtatcctatgggtagggtactacaatgcccgtcccaatacccgtgtttgtaaaaaatacccgta 22580204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 268
Target Start/End: Complemental strand, 35739228 - 35739114
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    ||||||||| ||||||||||||||||||||||||| || |||  || ||| |||||| || ||| |||||||| ||| || ||||||| ||||| | |||    
T  35739228 atagggatggcaatgggtactcaatgggtagggtattatagtatccatccacatacccgcgtttgtaaaaaatgcccatacccgtgcccgtacccttgtg 35739129  T
Q  254 agcaacaactttagt 268  Q
     ||||||| ||||||    
T  35739128 ggcaacaattttagt 35739114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 2433153 - 2433317
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| ||||| |||| |||||||||||||  || ||||||| |||||||| |  ||||| ||| |||||||  || |||||   ||||| |||||     
T  2433153 tagggatggcaatgagtacccaatgggtagggttttatagtgcccatccccatatccacatttgtaagaaatacctatacccgtgttcgtaccttcgtgg 2433252  T
Q  255 gcaacaactttagtctcattctgcata-ccttattgatacctaagtgcccatacctgcacccatt 318  Q
    |||||||||||||| || |||  |||| || ||| | ||||||||||||||||||  ||||||||    
T  2433253 gcaacaactttagtgtccttccccatacccctatgggtacctaagtgcccataccctcacccatt 2433317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 266
Target Start/End: Complemental strand, 33363111 - 33363000
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||| |||||||||| |||  || ||||||||||  ||||| ||||||||   |||| ||| ||| ||||| |||||     
T  33363111 tagggatggcaatgggtacccaatggatagggtactatagtatccatccccataccctcatttgtaaaaaatgttcgtacccgagcccgtaccctcgtgg 33363012  T
Q  255 gcaacaacttta 266  Q
    ||||||||||||    
T  33363011 gcaacaacttta 33363000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 39026633 - 39026796
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||| |||||||||| |||  || || |||||||  | ||| |||||||| |||||| ||| | | ||||  |||||     
T  39026633 tagggatggcaatgggtacccaatggatagggtactatagtatccatcgccatacccacgtttgtaaaaaatgcccgtacccgagtccgtactctcgtgg 39026732  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||  | |||  |||||| ||| |  || |||||||||||||| |||||||||    
T  39026733 gcaacaactttagtgcccttccccataccctatgggcacttaagtgcccatacccgcacccatt 39026796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 48662550 - 48662712
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||| ||| ||| |  ||||||| || ||| ||||||||| ||||| |||  |  ||||| |||||     
T  48662550 tagggatggcaatgggtacccaatgggtagggtactatagtacccatttccatacctgcgtttgtaaaaaatatccgtacccg-actcgtaccctcgtgg 48662648  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||  | |||| |||||  ||| |  |||||||||  |||||| |||||||||    
T  48662649 gcaacaactttagtgcctttctccatactctatgggcacctaagtgttcatacccgcacccatt 48662712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 308
Target Start/End: Complemental strand, 40094725 - 40094572
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||  ||||||||||||||| | |||  || |||||||||| || ||| |||||||||  ||||  ||  |||||| | |||||     
T  40094725 tagggatggcaatgggtatccaatgggtagggtaccatagtatccatccccatacccgcgtttgtaaaaaatattcgtacacggacctgtatcctcgtgg 40094626  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacc 308  Q
    ||||||||||||||  | |||  |||||| ||| |  |||||||||||||||||    
T  40094625 gcaacaactttagtgcccttccccataccctatgggcacctaagtgcccatacc 40094572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 176 - 308
Target Start/End: Complemental strand, 4052560 - 4052428
Alignment:
Q  176 aatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctcattc 275  Q
    |||||||||||||| | |||  || |||||||||| || ||| ||||||||  ||||| ||| ||| ||||| ||||||  |||||||||||| ||||||    
T  4052560 aatgggtagggtacaatagtatccttccccatacccgcgtttgtaaaaaatgtccgtacccgagcccgtaccttcgtgaataacaactttagtgtcattc 4052461  T
Q  276 tgcataccttattgatacctaagtgcccatacc 308  Q
      |||| | ||| | ||||||||||| ||||||    
T  4052460 cccatatcctatgggtacctaagtgctcatacc 4052428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 318
Target Start/End: Original strand, 47662187 - 47662330
Alignment:
Q  175 caatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctcatt 274  Q
    |||||| ||| |||||| |||  || ||||||||||  | ||| |||||||| | |||| ||||||| ||||| ||||| ||||||||||||||  | ||    
T  47662187 caatggatagtgtactatagtatccatccccatacccacgtttgtaaaaaatgctcgtacccgtgcccgtaccctcgtgggcaacaactttagtgccctt 47662286  T
Q  275 ctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    |  |||||| ||| |  || |||||||||||||| |||||||||    
T  47662287 ccccataccctatgggcacttaagtgcccatacccgcacccatt 47662330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 29426516 - 29426439
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgta 233  Q
    ||||||||||||||||||| ||||||| ||||||||| ||| ||| | |||||| | || ||| |||||||||||||||    
T  29426516 tagggatgacaatgggtacccaatgggcagggtactatagtacccat-cccatatccgcgtttgtaaaaaatacccgta 29426439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 32133391 - 32133469
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgta 233  Q
    |||||||| |||||||||| ||||||||||||||||| |||  || |||||||||| | |||| | |||||| ||||||    
T  32133391 tagggatggcaatgggtacccaatgggtagggtactatagtaaccatccccatacccgtatttgtgaaaaatgcccgta 32133469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 25058993 - 25059046
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccata 208  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||||| | ||||||    
T  25058993 tagggatgacaatgggtacccaatgtgtagggtactacaatgcccatacccata 25059046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 48514324 - 48514437
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| ||||| ||||| ||||| |||||||||| |||  || | |||||||| || ||| |||||||| | |||| ||||| | ||||| |||||     
T  48514324 tagggatggcaatgagtacttaatggatagggtactatagtatccattcccatacccgcgtttgtaaaaaatgctcgtacccgtgtccgtaccctcgtgg 48514423  T
Q  255 gcaacaactttagt 268  Q
     |||||||||||||    
T  48514424 acaacaactttagt 48514437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 190
Target Start/End: Complemental strand, 28192685 - 28192650
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtact 190  Q
    |||||||| |||||||||||||||||||||||||||    
T  28192685 tagggatggcaatgggtactcaatgggtagggtact 28192650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 30489558 - 30489629
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaat 226  Q
    |||||||| |||||||||  ||||||||||||||||| ||| | | |||||||||| || ||| ||||||||    
T  30489558 tagggatggcaatgggtagccaatgggtagggtactatagtactcttccccatacccgcgtttgtaaaaaat 30489629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 313
Target Start/End: Original strand, 38491331 - 38491469
Alignment:
Q  175 caatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctcatt 274  Q
    ||||||||||||||||||| || || ||| ||| || |||||| |||||| ||  ||||   ||||| ||||| ||||  ||||||||||||||  | ||    
T  38491331 caatgggtagggtactacaatgtccatcctcattcccgcatttgtaaaaattaatcgtacatgtgcccgtaccctcgtaggcaacaactttagtaccctt 38491430  T
Q  275 ctgcataccttattgatacctaagtgcccatacctgcac 313  Q
    |  |||||| ||| | || ||||||||||||||| ||||    
T  38491431 ccccataccctatgggtatctaagtgcccatacccgcac 38491469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 268
Target Start/End: Original strand, 14106213 - 14106325
Alignment:
Q  156 agggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgag 255  Q
    ||||||| |||| ||||| ||||||| ||||||||| |||  || |||| |||||  | ||| ||||||||  ||||| ||| || |||| | ||||| |    
T  14106213 agggatggcaattggtacccaatgggcagggtactatagtatccatccctatacccacgtttgtaaaaaatgtccgtacccgagcttgtatcctcgtggg 14106312  T
Q  256 caacaactttagt 268  Q
    |||||||||||||    
T  14106313 caacaactttagt 14106325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 35949804 - 35949732
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaata 227  Q
    |||||||| ||||||||| ||||||||||||| | || ||| ||| |||| ||||| || ||| |||||||||    
T  35949804 tagggatggcaatgggtattcaatgggtagggaattatagtacccatccctatacctgcgtttgtaaaaaata 35949732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 5e-47; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 44792862 - 44792699
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||     
T  44792862 tagggatggcaatgggtacccaatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaatacccgtatccgtgcccgtaccctcgtgg 44792763  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | |||  |||||| ||| | ||| ||||| |||||||| |||||||||    
T  44792762 gcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccgcacccatt 44792699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 49359850 - 49360013
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||| | ||||| |||||     
T  49359850 tagggatggcaatgggtacccaatgggtagggtactacactgcctgtccccatacccgcatttataaaaaatacccgtatccgtgtccgtaccctcgtgg 49359949  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | |||  |||||| ||| | ||||| ||| |||||||| |||||||||    
T  49359950 gcaacaactttagtccccttccccataccctatgggtacctcagtacccatacccgcacccatt 49360013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 155 - 308
Target Start/End: Complemental strand, 50481283 - 50481130
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||| ||||| |||||     
T  50481283 tagggatggcaatgggtacccaatgggtagggtactacagtgcccgtccccatccccgcatttataaaaaatacccgtacccgtgcccgtaccctcgtgg 50481184  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacc 308  Q
    ||||||||||||||| | |||  |||| | ||| | ||||| ||||||||||||    
T  50481183 gcaacaactttagtccccttccccatagcctatgggtacctcagtgcccatacc 50481130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 24987626 - 24987463
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||  ||||||| ||||| |||||     
T  24987626 tagggatggcaatgggtacccaatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaatacccgtgcccgtgcccgtaccctcgtgg 24987527  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | |||  |||||| ||| | ||| ||||| |||||||| ||| |||||    
T  24987526 gcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccgcatccatt 24987463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 154 - 318
Target Start/End: Original strand, 19618572 - 19618736
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    ||||||||| |||||||||  ||||||| ||||||||||| || ||||||||||||| |||||||||||||||| ||||| ||||||  ||||| |||||    
T  19618572 atagggatggcaatgggtatccaatgggcagggtactacattgtccgtccccatacccgcatttataaaaaatatccgtacccgtgctcgtaccctcgtg 19618671  T
Q  254 agcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
     ||||||||||||||  | |||  |||||| ||| |||||||||||||||||||| |||||||||    
T  19618672 ggcaacaactttagttcccttccccataccctatggatacctaagtgcccatacccgcacccatt 19618736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 5041273 - 5041110
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||| ||| ||||||||||||||||||| ||||| |||||||||| |||||| |||||| ||||||||  |||| | ||||| |||||     
T  5041273 tagggatggcaatggatacccaatgggtagggtactacaatgcccatccccatacccgcatttttaaaaattacccgtactcgtgtccgtaccctcgtgg 5041174  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    |||||||||||||| ||||||  |||||| ||| | || |||||||||||||||||||||||||    
T  5041173 gcaacaactttagtgtcattccccataccctataggtatctaagtgcccatacctgcacccatt 5041110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 154 - 318
Target Start/End: Complemental strand, 23299741 - 23299577
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    ||||| ||| ||||||||||  |||||||||||||||||| ||||| |||||||||| |||||| |||||| || ||||| ||||||| ||||| | |||    
T  23299741 ataggaatgtcaatgggtaccaaatgggtagggtactacaatgcccatccccatacccgcatttttaaaaattatccgtacccgtgcccgtacccttgtg 23299642  T
Q  254 agcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
     |||||||||||||| ||||||  |||||| ||| | || ||||||||||||||| |||||||||    
T  23299641 ggcaacaactttagtgtcattccccataccctatgggtatctaagtgcccatacccgcacccatt 23299577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 39352354 - 39352512
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttat-aaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||      || |||||    
T  39352354 tagggatgacaatgggtacctaatgggtagggtactacagtgcccgtccccatacccgcatttataaaaaaatacccgtacccgtg------ccctcgtg 39352447  T
Q  254 agcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
     ||||||||||||||| | |||  |||||| |||   ||||||||||||||||||  ||||||||    
T  39352448 ggcaacaactttagtccccttccccataccctatgagtacctaagtgcccatacccacacccatt 39352512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 175 - 318
Target Start/End: Complemental strand, 13735827 - 13735683
Alignment:
Q  175 caatgggtagggtactacagtgcccgtccccataccggcatttataa-aaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctcat 273  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| || ||||||| ||| | ||||| |||||||||||| || | |    
T  13735827 caatgggtagggtactacagtgcccgtccccatacccgcatttataaaaaaatacccttacccgtgcccgtatcctcgtgggcaacaactttaatcccct 13735728  T
Q  274 tctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||  |||||| ||| | ||||| |||||| ||||| |||||||||    
T  13735727 tccccataccctatgggtacctcagtgccgatacccgcacccatt 13735683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 25467374 - 25467537
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||| |||||||| | |||||| |||||| |||||| | |||||||  |||| |||||     
T  25467374 tagggatggcaatgggtacccaatgggtagggtactacaatgcccatccccatatccgcatttttaaaaattacccgcacccgtgcccataccctcgtgg 25467473  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||  | |||  |||| ||||| | || |||||||| |||||| |||||||||    
T  25467474 gcaacaactttagtgcccttccccatatcttatgggtatctaagtgctcatacccgcacccatt 25467537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 45079425 - 45079262
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    ||||||||||||||||||| |||||| |||||||||| ||| ||| ||||||||||  ||||| ||||||||  ||||| ||| ||| ||||| |||||     
T  45079425 tagggatgacaatgggtacccaatggatagggtactatagtacccatccccataccctcatttgtaaaaaatgtccgtacccgagcccgtaccctcgtgg 45079326  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||  | |||  |||||| ||| |  || |||||||||||||| |||||||||    
T  45079325 gcaacaactttagtgcccttccccataccctatgggcacttaagtgcccatacccgcacccatt 45079262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 175 - 318
Target Start/End: Original strand, 41923877 - 41924020
Alignment:
Q  175 caatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctcatt 274  Q
    ||||||||||||||||||| ||||||| |  ||||| ||||||||||||||||||||||||||||   ||||| ||||| ||||||||||||||| | ||    
T  41923877 caatgggtagggtactacaatgcccgttcttatacccgcatttataaaaaatacccgtatccgtgttcgtaccctcgtgggcaacaactttagtcccctt 41923976  T
Q  275 ctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    |  |||||  ||| | ||| |||||| | ||||| |||||||||    
T  41923977 ccccatactctatgggtacttaagtgtctatacccgcacccatt 41924020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 5908119 - 5908232
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||| |||  || |||||||||| || ||| |||||||| ||| || | ||||| ||||| |||||     
T  5908119 tagggatggcaatgggtacccaatgggtagggtactatagtatccatccccatacccgcgtttgtaaaaaatgcccatacctgtgcccgtaccctcgtgg 5908218  T
Q  255 gcaacaactttagt 268  Q
    ||||||||||||||    
T  5908219 gcaacaactttagt 5908232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 268
Target Start/End: Complemental strand, 30248275 - 30248160
Alignment:
Q  153 catagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgt 252  Q
    |||||||||| |||||||||| |||||| |||||||||| ||| ||| ||||||||||  ||||| |||||||| |||||| ||  | | ||||| ||||    
T  30248275 catagggatggcaatgggtacccaatggatagggtactatagtacccatccccataccctcatttgtaaaaaatgcccgtacccaagtccgtaccctcgt 30248176  T
Q  253 gagcaacaactttagt 268  Q
    | ||||||||||||||    
T  30248175 gggcaacaactttagt 30248160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 268
Target Start/End: Original strand, 40563829 - 40563940
Alignment:
Q  157 gggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagc 256  Q
    |||||| |||| ||||| ||||| ||||||||||||| | ||| |||||||||| |||||| |||||| ||||||||| |||||| ||| |  |||| ||    
T  40563829 gggatggcaataggtacccaatgtgtagggtactacaatacccatccccatacccgcatttgtaaaaattacccgtattcgtgcccgtatctccgtgggc 40563928  T
Q  257 aacaactttagt 268  Q
    ||||||||||||    
T  40563929 aacaactttagt 40563940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 49374681 - 49374844
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||| ||||| |||  || |||||||||| |  ||| ||||||||||||||||||||||| ||| | |||||     
T  49374681 tagggatggcaatgggtacccaatgggtaggatactatagtatccatccccatacccgtgtttgtaaaaaatacccgtatccgtgcccgtatcctcgtgg 49374780  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
     |||||| |||||| || ||   |||||| ||| |  || ||||||| |||||| |||||||||    
T  49374781 acaacaattttagtgtcctttcccataccctatgggcacttaagtgctcatacccgcacccatt 49374844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 318
Target Start/End: Original strand, 6408519 - 6408625
Alignment:
Q  212 gcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgc 311  Q
    |||||||||||||||||||||| |||||||  |||| ||||| |||||||||||||||   |||  | |||| ||| | |||||||||||||||||| ||    
T  6408519 gcatttataaaaaatacccgtacccgtgcccctaccctcgtgggcaacaactttagtcctcttccccgtaccctatgggtacctaagtgcccatacccgc 6408618  T
Q  312 acccatt 318  Q
    |||||||    
T  6408619 acccatt 6408625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 150 - 268
Target Start/End: Original strand, 27064075 - 27064193
Alignment:
Q  150 acacatagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccat 249  Q
    |||| ||||||||||||||||||| ||||||||||||||| | ||| ||| |||||||||| || ||| |||||||| |||||  ||| ||| ||||  |    
T  27064075 acacctagggatgacaatgggtacccaatgggtagggtacaatagtacccttccccatacccgcgtttgtaaaaaatgcccgtgcccgagcccgtacact 27064174  T
Q  250 cgtgagcaacaactttagt 268  Q
    |||| | ||||||||||||    
T  27064175 cgtgggtaacaactttagt 27064193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 10085480 - 10085367
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||| ||||||||||||||  || || ||||||| || ||| ||||||||  | |||||||||||  |||| |||||     
T  10085480 tagggatggcaatgggtacccaatggatagggtactacagtatccatctccatacccgcgtttgtaaaaaatgtctgtatccgtgcccataccctcgtgg 10085381  T
Q  255 gcaacaactttagt 268  Q
    ||||||||||||||    
T  10085380 gcaacaactttagt 10085367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 10192400 - 10192287
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||| ||||||||||||||  || || ||||||| || ||| ||||||||  | |||||||||||  |||| |||||     
T  10192400 tagggatggcaatgggtacccaatggatagggtactacagtatccatctccatacccgcgtttgtaaaaaatgtctgtatccgtgcccataccctcgtgg 10192301  T
Q  255 gcaacaactttagt 268  Q
    ||||||||||||||    
T  10192300 gcaacaactttagt 10192287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 318
Target Start/End: Original strand, 32995116 - 32995285
Alignment:
Q  149 cacacatagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtacca 248  Q
    |||| ||||||||| |||||||||| |||| |||||||||||| |||  || |||||||||| || ||| ||||||||   ||||  |||||| |||||     
T  32995116 cacatatagggatggcaatgggtacccaataggtagggtactatagtatccatccccatacctgcgtttgtaaaaaatgttcgtactcgtgcccgtaccc 32995215  T
Q  249 tcgtgagcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    |||||  ||||||||||||| || |||  |||||| ||| |  || ||||||| |||||| |||||||||    
T  32995216 tcgtggacaacaactttagtgtccttccacataccctatgggcacttaagtgctcatacccgcacccatt 32995285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 266
Target Start/End: Original strand, 43657156 - 43657267
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    |||||||||||||||||||| |||||| |||| ||||| |||  || ||||||||||  | ||| |||||||| ||||||  |||||||||||| |||||    
T  43657156 atagggatgacaatgggtacccaatggctagg-tactatagtatccatccccatacccacgtttgtaaaaaatgcccgtactcgtgcctgtaccctcgtg 43657254  T
Q  254 agcaacaacttta 266  Q
     ||||||||||||    
T  43657255 ggcaacaacttta 43657267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 42096962 - 42096799
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    ||||||||||||||| |||  ||||| ||| |||||| ||| ||||||||||||||  ||||| ||||||||  || || ||| ||| ||||| |||||     
T  42096962 tagggatgacaatggataccaaatggatagagtactatagtacccgtccccataccctcatttgtaaaaaatgtccatacccgagcccgtaccttcgtgg 42096863  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
     |||||||||||||  | |||  |||||| ||| |  || |||||||||||||| |||||||||    
T  42096862 acaacaactttagtgcccttccccataccctatgggcacttaagtgcccatacccgcacccatt 42096799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 48079961 - 48080040
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgta 233  Q
    ||||||||| |||||||||| ||||||||||||||||||| ||||| ||||||||||  ||||| |||||| || |||||    
T  48079961 atagggatggcaatgggtacccaatgggtagggtactacaatgcccatccccatacccacatttgtaaaaattatccgta 48080040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 41410477 - 41410364
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| ||||||||||||||||| |||| ||||| ||| ||| ||||||||||  ||||| ||||||||  | ||| ||| | | ||||| |||||     
T  41410477 tagggatggcaatgggtactcaatggataggatactatagtacccatccccataccctcatttgtaaaaaatgtctgtacccgagtccgtaccctcgtgg 41410378  T
Q  255 gcaacaactttagt 268  Q
    ||||||||||||||    
T  41410377 gcaacaactttagt 41410364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 318
Target Start/End: Original strand, 19873001 - 19873144
Alignment:
Q  175 caatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctcatt 274  Q
    ||||||||||||||||| | ||||| ||  |||||| |||||| |||||| |||   || | ||||| ||||| ||||| ||||||||||||||  |  |    
T  19873001 caatgggtagggtactataatgcccatcttcatacccgcatttgtaaaaattacatatacctgtgcccgtaccctcgtgggcaacaactttagtgcccct 19873100  T
Q  275 ctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    |  ||||| |||| | |||||||||||||||||| |||||||||    
T  19873101 ccccatactttatgggtacctaagtgcccatacccgcacccatt 19873144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 36691993 - 36692058
Alignment:
Q  159 gatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaa 225  Q
    ||||||||||| ||| |||||||||||||||||||||| || ||||||| || ||||||||||||||    
T  36691993 gatgacaatgg-tacccaatgggtagggtactacagtgtccttccccatgcccgcatttataaaaaa 36692058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 19454673 - 19454786
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||| |||||||||| ||| ||| ||||||| || || ||| |||||||| | |||| |||  |  ||||| |||||     
T  19454673 tagggatggcaatgggtacccaatggatagggtactatagtacccatccccatgcctgcgtttgtaaaaaatgctcgtacccggactcgtaccctcgtgg 19454772  T
Q  255 gcaacaactttagt 268  Q
    ||||||||||||||    
T  19454773 gcaacaactttagt 19454786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 318
Target Start/End: Complemental strand, 38695013 - 38694870
Alignment:
Q  175 caatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctcatt 274  Q
    ||||||||||||||||| ||| ||| |||||||| | |||||| | |||||| || ||| ||||| | ||||| ||||| |||| |||||||||  | ||    
T  38695013 caatgggtagggtactatagtacccatccccatatccgcatttgtgaaaaatgcctgtacccgtgtccgtaccctcgtgggcaaaaactttagtgccctt 38694914  T
Q  275 ctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    |  |||||| ||| || || |||||| ||||||| |||| ||||    
T  38694913 ccccataccctatggacacttaagtgtccatacccgcactcatt 38694870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 308
Target Start/End: Original strand, 46819047 - 46819201
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    ||||||||| |||||||||| |||||| |||||||||| | ||||| |||||||| |  ||||| ||| |||||| | || ||||| |  |||  |||||    
T  46819047 atagggatggcaatgggtacccaatggatagggtactataatgcccatccccatatccacatttgtaagaaatacacatacccgtgtccatactctcgtg 46819146  T
Q  254 agcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacc 308  Q
     | ||||||||||||  | |||| |||||| | | | ||||||||||| ||||||    
T  46819147 ggtaacaactttagtgcccttctccataccctgtgggtacctaagtgctcatacc 46819201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 11671723 - 11671778
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccatacc 210  Q
    |||||||| |||||| ||| |||||| |||||||||||| ||||| ||||||||||    
T  11671723 tagggatggcaatggatacccaatggatagggtactacaatgcccatccccatacc 11671778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 39961414 - 39961464
Alignment:
Q  178 tgggtagggtactacagtgcccgtccccataccggcatttataaaaaatac 228  Q
    |||| ||||||||| ||||||| |||||||||| || ||||||||||||||    
T  39961414 tgggcagggtactatagtgcccatccccatacccgcgtttataaaaaatac 39961464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 274
Target Start/End: Original strand, 46584574 - 46584684
Alignment:
Q  164 caatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaact 263  Q
    |||||||||| ||||| ||||||||||||||||| | ||| |||||| || |||  ||| ||||| | |||| | ||| ||| | || |||| |||||||    
T  46584574 caatgggtacccaatgagtagggtactacagtgctcttcctcatacccgcgtttgaaaataatactcatatctgagcccgtatcctcatgagtaacaact 46584673  T
Q  264 ttagtctcatt 274  Q
    |||||| ||||    
T  46584674 ttagtcccatt 46584684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 266
Target Start/End: Original strand, 33099536 - 33099645
Alignment:
Q  157 gggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagc 256  Q
    |||||| |||||||| | | ||| ||||||||||||||||||| || ||||||  || ||| ||| |||||| |||| | | ||| ||||| |||||  |    
T  33099536 gggatggcaatgggtgccctatgagtagggtactacagtgcccttctccatactcgcgtttgtaataaatactcgtacctgagcccgtaccttcgtggcc 33099635  T
Q  257 aacaacttta 266  Q
    ||||||||||    
T  33099636 aacaacttta 33099645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 318
Target Start/End: Original strand, 51055374 - 51055510
Alignment:
Q  182 tagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctcattctgcata 281  Q
    |||||||||||| ||||| || |||| || |||||| ||||||||||  ||| ||| ||  ||| | | ||| ||||||||||||||  |||||  ||||    
T  51055374 tagggtactacaatgcccttctccatgcctgcatttgtaaaaaatacatgtacccgagctcgtatccttgtgggcaacaactttagtggcattcctcata 51055473  T
Q  282 ccttattgatacctaagtgcccatacctgcacccatt 318  Q
    || |||    |||||||||| |||||||||| |||||    
T  51055474 ccctatgagcacctaagtgcacatacctgcatccatt 51055510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 19804937 - 19805100
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| ||||| |||||     
T  19804937 tagggatggcaatgggtacccaatgggtagggtactacagtgcccgtcctcatacccgcatttataaaaaatacccgtacccgtgcccgtaccctcgtgg 19805036  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    | ||||||||||||| | |||  |||||| ||| | ||||||||||| |||||| |||||||||    
T  19805037 gtaacaactttagtccccttccccataccctatgggtacctaagtgctcatacccgcacccatt 19805100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 16567466 - 16567629
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||| ||||||| ||||| |||||     
T  16567466 tagggatggcaatgggtacccaatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaatatccgtacccgtgcccgtaccctcgtgg 16567565  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | |||  |||||| ||| | ||| ||||| |||||||| |||||||||    
T  16567566 gcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccgcacccatt 16567629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 16598196 - 16598033
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||| ||||||| ||||| |||||     
T  16598196 tagggatggcaatgggtacccaatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaatatccgtacccgtgcccgtaccctcgtgg 16598097  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | |||  |||||| ||| | ||| ||||| |||||||| |||||||||    
T  16598096 gcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccgcacccatt 16598033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 46181112 - 46181275
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||| ||||||| ||||| |||||     
T  46181112 tagggatggcaatgggtacccaatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaatatccgtacccgtgcccgtaccctcgtgg 46181211  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | |||  |||||| ||| | ||| ||||| |||||||| |||||||||    
T  46181212 gcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccgcacccatt 46181275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 5023405 - 5023243
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||  || |  ||||     
T  5023405 tagggatggcaatgggtacccaatgggtagggtactacagtgcccgtccccatacccgcatttataaaaaatacccgtactcgtgcccttatc-ccgtgg 5023307  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccattg 319  Q
    ||||||||||||||||| |||  |||||| ||| | |||||||||||||||||| ||||||||||    
T  5023306 gcaacaactttagtctccttc-ccataccctatgggtacctaagtgcccatacccgcacccattg 5023243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 10066474 - 10066311
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||||||||||| || ||||||||| ||||||||||||| |||||| ||||| |||||||||||||||||| ||| ||||| | ||||| |||||     
T  10066474 tagggatgacaatgggcacccaatgggtatggtactacagtgcgcgtccctatacccgcatttataaaaaatacctgtacccgtgtccgtaccctcgtgg 10066375  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | |||  |||||| ||| | |||||||||||||||||| |||||||||    
T  10066374 gcaacaactttagtccccttccccataccctataggtacctaagtgcccatacccgcacccatt 10066311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 159 - 318
Target Start/End: Original strand, 27398483 - 27398642
Alignment:
Q  159 gatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaa 258  Q
    |||| |||||||| | |||||| |||||||||||| |||||||||||||||| | ||||||||||||||||| || ||||||| ||||| ||||| ||||    
T  27398483 gatggcaatgggtgcccaatggatagggtactacaatgcccgtccccatacccgtatttataaaaaatacccatacccgtgcccgtaccctcgtgggcaa 27398582  T
Q  259 caactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||| | |||  |||||| ||| ||||| |||||||||||||| |||||||||    
T  27398583 caactttagtccccttccccataccctatggatacttaagtgcccatacccgcacccatt 27398642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 159 - 263
Target Start/End: Original strand, 39414481 - 39414585
Alignment:
Q  159 gatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaa 258  Q
    |||| |||||||||| |||||| |||||||||||| ||||||| |||||||| |||||||||||||||||||||| ||||||| ||||| ||||| ||||    
T  39414481 gatggcaatgggtacccaatggatagggtactacaatgcccgttcccatacccgcatttataaaaaatacccgtacccgtgcccgtaccttcgtgggcaa 39414580  T
Q  259 caact 263  Q
    |||||    
T  39414581 caact 39414585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 318
Target Start/End: Complemental strand, 1876257 - 1876095
Alignment:
Q  156 agggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgag 255  Q
    |||||||||||||||||| ||||||| |||||||||  || ||| |||||||||| || ||| |||||||||| |||| |||  || ||||||||||| |    
T  1876257 agggatgacaatgggtacccaatgggaagggtactatggtacccatccccatacccgcgtttgtaaaaaatactcgtacccggacccgtaccatcgtggg 1876158  T
Q  256 caacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    |||||||||||||  | |||  |||||| ||| |  ||||||||||||||||| |||||||||    
T  1876157 caacaactttagtgcccttccccataccctatgggcacctaagtgcccatacccgcacccatt 1876095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 155 - 313
Target Start/End: Original strand, 46782987 - 46783133
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |            ||||| |||||     
T  46782987 tagggatggcaatgggtacccaatggttagggtactacagtgcccgtccccatacccgcatttataaaaaatacac------------gtaccctcgtgg 46783074  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcac 313  Q
    ||||||||||||||| | |||| |||||| ||| | |||||||||||||||||| ||||    
T  46783075 gcaacaactttagtccccttctccataccctatgggtacctaagtgcccatacccgcac 46783133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 28067486 - 28067323
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||| ||||||| | ||| ||| |||||||||| || ||| |||||||||||||||  || ||  ||||| |||||     
T  28067486 tagggatggcaatgggtacccaatgggcagggtacaatagtacccatccccatacccgcgtttgtaaaaaatacccgtactcgagctcgtaccctcgtgg 28067387  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
     ||||||||||| | || |||  |||||| ||| | ||| ||||||||||||||||||||||||    
T  28067386 acaacaactttaatgtctttcctcataccctatgggtacttaagtgcccatacctgcacccatt 28067323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 35092925 - 35092850
Alignment:
Q  158 ggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgta 233  Q
    ||||| |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  35092925 ggatggcaatgggtgcttaatgggtagggtactacagtgcccgtccccatacccgcatttataaaaaatactcgta 35092850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 43224223 - 43224380
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| ||||| |||| ||||||| ||||||||||| ||||| |||||||||| |||||| |||||| |||      ||||| ||||||| |||||     
T  43224223 tagggatggcaatgagtacccaatgggaagggtactacaatgcccatccccatacccgcatttttaaaaattac------ccgtgtctgtaccctcgtgg 43224316  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
     |||||||||||||  | |||  |||||| ||| | || |||||||||||||||||||||||||    
T  43224317 acaacaactttagtgcccttccccataccctatgggtatctaagtgcccatacctgcacccatt 43224380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 268
Target Start/End: Complemental strand, 9355378 - 9355264
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    |||||||||||||||||||| ||||||||||||||||| |||  || ||| ||||||  | ||| |||||||||| ||||  |||||| ||||| |||||    
T  9355378 atagggatgacaatgggtacccaatgggtagggtactatagtatccatcctcatacccacgtttgtaaaaaatactcgtacacgtgcccgtaccctcgtg 9355279  T
Q  254 agcaacaactttagt 268  Q
     ||||||||||||||    
T  9355278 ggcaacaactttagt 9355264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 313
Target Start/End: Complemental strand, 33067683 - 33067525
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| ||||||||||  ||||| |||||||||||| ||||  ||  ||||||  ||||| |||||| ||||||||||| ||||  |||| |||||     
T  33067683 tagggatggcaatgggtaccaaatggatagggtactacaatgcctatcttcatacccacatttgtaaaaattacccgtatccatgcccataccctcgtgg 33067584  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcac 313  Q
    |||||||||||||| || |||  |||||  ||| | |||||||||||||||||| ||||    
T  33067583 gcaacaactttagtgtccttccccatactctatgggtacctaagtgcccatacccgcac 33067525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 271
Target Start/End: Original strand, 31454796 - 31454913
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    ||||||||| |||||||||  ||||| ||||||||||||| || ||||||||||| | ||||||||||||||||| ||||  | |||| |||   |||||    
T  31454796 atagggatggcaatgggtatccaatgagtagggtactacaatgtccgtccccatatccgcatttataaaaaatactcgtactcatgcccgtattctcgtg 31454895  T
Q  254 agcaacaactttagtctc 271  Q
     |||||||||||||||||    
T  31454896 ggcaacaactttagtctc 31454913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 315
Target Start/End: Original strand, 44300612 - 44300772
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||| |||||||||| ||| ||| ||||||||    ||||| ||||||||  ||||| ||| ||| ||||| |||||     
T  44300612 tagggatggcaatgggtacccaatggatagggtactatagtacccatccccataagctcatttgtaaaaaatgtccgtacccgagcccgtaccctcgtgg 44300711  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcaccc 315  Q
    ||||||||||||||  | |||  |||| ||||| |  || |||||||||||||||||||||    
T  44300712 gcaacaactttagtgcccttccccatatcttatgggcacttaagtgcccatacctgcaccc 44300772  T

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Target: chr7; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 313
Target Start/End: Original strand, 9223541 - 9223699
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    ||||||||  ||||||||| |||||||||||||||||  ||  || ||||||||||  | ||| |||||||| |||||| | ||||| ||||| |||||     
T  9223541 tagggatggtaatgggtacccaatgggtagggtactattgtatccatccccatacccacgtttgtaaaaaatgcccgtacctgtgcccgtaccctcgtgg 9223640  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcac 313  Q
    |||||||||||||| ||||||  |||||| ||| |  || |||||| ||||||| ||||    
T  9223641 gcaacaactttagtatcattccccataccctatgggcacttaagtgtccatacccgcac 9223699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 150 - 268
Target Start/End: Complemental strand, 25309733 - 25309615
Alignment:
Q  150 acacatagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccat 249  Q
    |||| |||||||| |||||||||| | ||||||| ||||||||||||||  || ||||||| || ||| |||||||||| ||||||||  || ||||| |    
T  25309733 acacttagggatggcaatgggtaccctatgggtaaggtactacagtgccattctccatacccgcgtttgtaaaaaatacacgtatccgaacccgtaccct 25309634  T
Q  250 cgtgagcaacaactttagt 268  Q
    |||  ||||||||||||||    
T  25309633 cgtaggcaacaactttagt 25309615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 266
Target Start/End: Original strand, 9477558 - 9477669
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    ||||||||||||||||||| |||| |||||||||||||| ||| | ||||||||||  ||||| |||||| || |||||   ||| | ||||| |||||     
T  9477558 tagggatgacaatgggtacccaatcggtagggtactacaatgctcatccccataccctcatttgtaaaaattatccgtacttgtgtccgtaccctcgtgg 9477657  T
Q  255 gcaacaacttta 266  Q
    ||||||||||||    
T  9477658 gcaacaacttta 9477669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 266
Target Start/End: Complemental strand, 17172434 - 17172323
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||| |||||||||| |||  || ||||||||||  ||||| ||||||||  ||||| ||| ||| ||||| |||||     
T  17172434 tagggatggcaatgggtacccaatggatagggtactatagtatccatccccataccctcatttgtaaaaaatgtccgtacccgagcccgtaccctcgtgg 17172335  T
Q  255 gcaacaacttta 266  Q
    ||||||||||||    
T  17172334 gcaacaacttta 17172323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 268
Target Start/End: Original strand, 42284403 - 42284517
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    ||||||||| ||||||||| | |||||||||||||||||| ||||| | |||||||| | |||| |||||| || | |||  |||||| ||||  |||||    
T  42284403 atagggatggcaatgggtatttaatgggtagggtactacaatgcccattcccatacctgtatttttaaaaattatctgtactcgtgcccgtactctcgtg 42284502  T
Q  254 agcaacaactttagt 268  Q
     ||||||||||||||    
T  42284503 ggcaacaactttagt 42284517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 48558899 - 48558786
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    ||||||||||||||||||  ||||||| | ||||||| ||| ||| |||||||||| |||||| ||||||||    ||| | ||||| ||||| |||||     
T  48558899 tagggatgacaatgggtatccaatgggcacggtactatagtacccatccccatacccgcatttgtaaaaaatgttagtacctgtgcccgtaccctcgtgg 48558800  T
Q  255 gcaacaactttagt 268  Q
    ||||||||||||||    
T  48558799 gcaacaactttagt 48558786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 318
Target Start/End: Complemental strand, 36074340 - 36074176
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    ||||||||| |||||||||  ||||||||||||||||| |||   | |||| ||||| || ||| |||||| | ||||||  |||||| ||||| |||||    
T  36074340 atagggatggcaatgggtatccaatgggtagggtactatagtattcatccctatacctgcgtttgtaaaaattgcccgtactcgtgcccgtaccttcgtg 36074241  T
Q  254 agcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
     | ||||||||||||  | |||  |||||| ||| |  ||||||||||||||||| | |||||||    
T  36074240 ggtaacaactttagtgcccttccccataccctatgggcacctaagtgcccatacccgtacccatt 36074176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 3362854 - 3362969
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttat-aaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    ||||| || |||||| ||| |||||| || |||||||||||| ||||| ||||||| | |||||| ||||||||||||||||  |||  ||||| |||||    
T  3362854 tagggttggcaatggttacccaatggataaggtactacagtgtccgtctccatacccgtatttataaaaaaatacccgtatctatgctggtaccctcgtg 3362953  T
Q  254 agcaacaactttagtc 269  Q
      ||||||||||||||    
T  3362954 gacaacaactttagtc 3362969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 265
Target Start/End: Original strand, 26299053 - 26299162
Alignment:
Q  156 agggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgag 255  Q
    |||||||  ||||||||||||||||||||||||||| |||  || || ||||||  || ||| |||||||| ||||||  |||||| ||||| |||||      
T  26299053 agggatggtaatgggtactcaatgggtagggtactatagtatccatctccatactcgcgtttgtaaaaaatgcccgtactcgtgcccgtaccctcgtgga 26299152  T
Q  256 caacaacttt 265  Q
    ||||||||||    
T  26299153 caacaacttt 26299162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 43702617 - 43702548
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaa 224  Q
    |||||||| |||||||||| |||| |||||||||||||| ||||| ||||||||||  ||||| ||||||    
T  43702617 tagggatggcaatgggtacccaataggtagggtactacaatgcccatccccatacccacatttgtaaaaa 43702548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 318
Target Start/End: Complemental strand, 30738834 - 30738686
Alignment:
Q  164 caatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaact 263  Q
    |||||||||| | ||| ||||||||||||||||||| | | |||||| |||||| |||||| |||| ||||||      | ||| | |||||||||||||    
T  30738834 caatgggtaccctatgagtagggtactacagtgccctttctcatacccgcatttgtaaaaagtacctgtatcc------gcaccttggtgagcaacaact 30738741  T
Q  264 ttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    |||   || |||| |||||  ||| | ||||||||||||||||||  ||||||||    
T  30738740 ttatcgtccttctccatacgctatgggtacctaagtgcccatacccacacccatt 30738686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 262
Target Start/End: Complemental strand, 3551739 - 3551641
Alignment:
Q  164 caatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaac 262  Q
    |||||||||| | ||  ||||||||||||||| ||| ||| |||||| | |||| ||||||||||| ||| || |||||||| | |||||  |||||||    
T  3551739 caatgggtaccctataagtagggtactacagtacccttcctcatacccgtatttgtaaaaaatacctgtacccatgcctgtatcttcgtggacaacaac 3551641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 233
Target Start/End: Complemental strand, 5924269 - 5924195
Alignment:
Q  159 gatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgta 233  Q
    |||| |||||||||| |||| ||||||||| || ||| ||| |||||||| | || ||| |||||||||||||||    
T  5924269 gatggcaatgggtacccaataggtagggtattatagtacccatccccatatccgcgtttgtaaaaaatacccgta 5924195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 21916241 - 21916319
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgta 233  Q
    |||||||| |||||| ||  | ||||||||||||| ||| | ||| |||||||| | |||||||||||||||| |||||    
T  21916241 tagggatggcaatggatatcctatgggtagggtacaacaattcccttccccatatccgcatttataaaaaatatccgta 21916319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 4912863 - 4912818
Alignment:
Q  180 ggtagggtactacagtgcccgt-ccccataccggcatttataaaaa 224  Q
    |||||||||||||||||||| | ||||||||| |||||||||||||    
T  4912863 ggtagggtactacagtgcccttcccccatacccgcatttataaaaa 4912818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 318
Target Start/End: Complemental strand, 34152526 - 34152409
Alignment:
Q  201 tccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctcattctgcataccttattgatacctaagtg 300  Q
    |||||||||| || ||| | ||||||  | ||| ||||| ||||||| ||||| |||| |||||||||  | |||  |||||| ||| || || ||||||    
T  34152526 tccccatacccgcgtttgttaaaaatgtctgtacccgtgtctgtaccctcgtgggcaataactttagtgcccttccccataccctatggacacttaagtg 34152427  T
Q  301 cccatacctgcacccatt 318  Q
    |||||||| |||||||||    
T  34152426 cccatacccgcacccatt 34152409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 318
Target Start/End: Original strand, 34174598 - 34174715
Alignment:
Q  201 tccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctcattctgcataccttattgatacctaagtg 300  Q
    |||||||||| || ||| | ||||||  | ||| ||||| ||||||| ||||| |||| |||||||||  | |||  |||||| ||| || || ||||||    
T  34174598 tccccatacccgcgtttgttaaaaatgtctgtacccgtgtctgtaccctcgtgggcaataactttagtgcccttccccataccctatggacacttaagtg 34174697  T
Q  301 cccatacctgcacccatt 318  Q
    |||||||| |||||||||    
T  34174698 cccatacccgcacccatt 34174715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 2959855 - 2959927
Alignment:
Q  164 caatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatcc 236  Q
    |||||||||| ||||| ||||||||||| ||| ||| |||| ||||| | |||| ||||||||  ||||||||    
T  2959855 caatgggtacccaatgagtagggtactatagtacccatccctatacccgtatttgtaaaaaatgtccgtatcc 2959927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 1e-44; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 3387424 - 3387261
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||| ||||| |||||     
T  3387424 tagggatggcaatgggtacccaatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaatacccgtacccgtgcccgtaccctcgtgg 3387325  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    |||||||||||||||   |||  |||||| ||| | ||| |||||||||||||| |||||||||    
T  3387324 gcaacaactttagtcctcttccccataccctatgggtacttaagtgcccatacccgcacccatt 3387261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 159 - 318
Target Start/End: Original strand, 12185685 - 12185844
Alignment:
Q  159 gatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaa 258  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||| ||||| ||||    
T  12185685 gatggcaatgggtacccaatgggtagggtactacagtgcccgtccccatacccgcatttataaaaaatacccgtacccgtgcccgtaccctcgtgggcaa 12185784  T
Q  259 caactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||| | |||  |||||| ||| | ||||| |||||||||||| ||| |||||    
T  12185785 caactttagtccccttccccataccctatgggtacctcagtgcccatacccgcatccatt 12185844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 159 - 318
Target Start/End: Original strand, 12187677 - 12187836
Alignment:
Q  159 gatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaa 258  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||| ||||| ||||    
T  12187677 gatggcaatgggtacccaatgggtagggtactacagtgcccgtccccatacccgcatttataaaaaatacccgtacccgtgcccgtaccctcgtgggcaa 12187776  T
Q  259 caactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||| | |||  |||||| ||| | ||||| |||||||||||| ||| |||||    
T  12187777 caactttagtccccttccccataccctatgggtacctcagtgcccatacccgcatccatt 12187836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 42755243 - 42755406
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||| ||||||| ||||| |||||     
T  42755243 tagggatggcaatgggtacccaatgggtagggtactacactgcccgtccccataccctcatttataaaaaatacccgtacccgtgcccgtaccctcgtgg 42755342  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    | ||||||||||||| | |||  |||||| ||| ||||||||||||| |||||| |||||||||    
T  42755343 gtaacaactttagtccccttccccataccctatggatacctaagtgcacatacccgcacccatt 42755406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 318
Target Start/End: Original strand, 14576693 - 14576857
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||| |||||    
T  14576693 atagggatggcaatgggtacccaatgggtagggtattacagtgcccgtccccatacccgcatttataaaaaatacccgtacccgtgcccgtaccctcgtg 14576792  T
Q  254 agcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
     ||||||| ||||||| | |||  |||| | ||| | ||||| |||||||||||| ||| |||||    
T  14576793 ggcaacaattttagtccccttccccatatcctatgggtacctcagtgcccatacccgcatccatt 14576857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 154 - 318
Target Start/End: Complemental strand, 2225168 - 2225002
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataa--aaaatacccgtatccgtgcctgtaccatcg 251  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| | ||||||||  |||||||||||| ||||||| ||||| |||    
T  2225168 atagggatgacaatgggtacttaatgggtagggtactacagtgcccgtccacatacccgtatttataaaaaaaatacccgtacccgtgcccgtaccttcg 2225069  T
Q  252 tgagcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    || ||||||| ||||||| | |||| ||||||  || | ||||||||||| |||||| |||||||||    
T  2225068 tgggcaacaattttagtccccttctccatacccgatgggtacctaagtgctcatacccgcacccatt 2225002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 42053476 - 42053313
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||| ||||||| ||||| |||||     
T  42053476 tagggatggcaatgggtacccaatgggtagggtactacaatgcccgtccccatacccgcatttataaaaaatatccgtacccgtgcccgtaccctcgtgg 42053377  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | |||  |||||| | | | ||| ||||| |||||||| |||||||||    
T  42053376 gcaacaactttagtccccttccccataccctgtgggtacttaagtacccatacccgcacccatt 42053313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 21075732 - 21075895
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||  ||| ||||||| ||||| |||||     
T  21075732 tagggatggcaatgggtacccaatggatagggtactacagtgcccgtccccatacccgcatttataaaaaatacttgtacccgtgcccgtaccctcgtgg 21075831  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||  ||||||| | |||  |||||| ||| | |||||||||||||||||| ||| |||||    
T  21075832 gcaacatttttagtccccttccccataccctatgggtacctaagtgcccatacccgcatccatt 21075895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 29149224 - 29149061
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||| |||||||||||| |||||||||||||||| |||||||||||||||| ||||| | ||||| ||||| |||||     
T  29149224 tagggatggcaatgggtacccaatggatagggtactacaatgcccgtccccatacccgcatttataaaaaatatccgtaccagtgcccgtaccctcgtgg 29149125  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | |||  |||||| ||| | ||| ||||| |||||||| |||||||||    
T  29149124 gcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccgcacccatt 29149061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 32655730 - 32655567
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||||| || ||||||||||||| |||||||||||||||| ||||| ||||||| ||||| |||||     
T  32655730 tagggatggcaatgggtacccaatgggtagggtactacaatgtccgtccccatacccgcatttataaaaaatatccgtacccgtgcccgtaccctcgtgg 32655631  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | |||  |||||| ||| | ||| || || |||||||| |||||||||    
T  32655630 gcaacaactttagtccccttccccataccctatgggtacttaggtacccatacccgcacccatt 32655567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 52180986 - 52180823
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||||| || ||||||||||||| |||||||||||||||| ||||| ||||||| ||||| |||||     
T  52180986 tagggatggcaatgggtacccaatgggtagggtactacaatgtccgtccccatacccgcatttataaaaaatatccgtacccgtgcccgtaccctcgtgg 52180887  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | |||  |||||| ||| | ||| || || |||||||| |||||||||    
T  52180886 gcaacaactttagtccccttccccataccctatgggtacttaggtacccatacccgcacccatt 52180823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 155 - 313
Target Start/End: Complemental strand, 54932936 - 54932778
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    ||||||||||||||||||  ||||||||||||||| |||||||||||||||||| | ||||||||||||||||| | || ||||||  ||| | |||||     
T  54932936 tagggatgacaatgggtatccaatgggtagggtacaacagtgcccgtccccatatccgcatttataaaaaatactcatacccgtgcacgtatcctcgtgg 54932837  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcac 313  Q
    ||||||||||||||||| |||  |||||||||| |||||||| ||| | ||||| ||||    
T  54932836 gcaacaactttagtctccttccccataccttatggatacctaggtgtcaatacccgcac 54932778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 175 - 318
Target Start/End: Original strand, 52595467 - 52595610
Alignment:
Q  175 caatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctcatt 274  Q
    ||||||||| ||||||||| || ||||||||||||| |||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||||||| |  |    
T  52595467 caatgggtacggtactacaatgtccgtccccatacccgcatttataaaaaatatccgtatccgtgcccgtaccctcgtgggcaacaactttagtccccat 52595566  T
Q  275 ctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    |  |||||| ||| | ||| |||||| ||||||| |||||||||    
T  52595567 catcataccctatgggtacttaagtgtccatacccgcacccatt 52595610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 175 - 313
Target Start/End: Original strand, 23147336 - 23147474
Alignment:
Q  175 caatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctcatt 274  Q
    ||||||||| | ||||||| |||||||||||||||| |||||||||||||||| ||||| ||||||| ||||| ||||| |||| |||||||||||||||    
T  23147336 caatgggtaagatactacaatgcccgtccccatacccgcatttataaaaaatatccgtacccgtgcccgtaccttcgtgggcaagaactttagtctcatt 23147435  T
Q  275 ctgcataccttattgatacctaagtgcccatacctgcac 313  Q
    |  |||||| ||| | ||| |||||| ||||||| ||||    
T  23147436 ccccataccctataggtacttaagtgtccatacccgcac 23147474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 1758188 - 1758025
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||| || |||||||  ||||| ||| |||| ||| || ||||||| ||||| |||||     
T  1758188 tagggatgacaatgggtatccaatgggtagggtactatagtgcccatctccatacccacatttgtaagaaatgcccatacccgtgcccgtaccttcgtgg 1758089  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    |||||||||||||   | |||  |||||| ||| | |||||||||||||||||| |||||||||    
T  1758088 gcaacaactttagggcccttccccataccctatgggtacctaagtgcccatacccgcacccatt 1758025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 11034598 - 11034761
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||| ||||||||| ||| ||| |||||||||| || ||| ||||||||||||||| |||  || ||||| |||||     
T  11034598 tagggatggcaatgggtacccaatgggcagggtactatagtacccatccccatacctgcgtttgtaaaaaatacccgtacccggacccgtaccctcgtgg 11034697  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||  | |||  |||||| ||| |  ||||||||||||||||| |||||||||    
T  11034698 gcaacaactttagtgcccttccccataccctatgggcacctaagtgcccatacccgcacccatt 11034761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 25938267 - 25938430
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||| || ||||||||  |||| |||||||||||||| || |||| |||||||| | |||||||||||||| ||||||||||||||||| | |||||     
T  25938267 tagggaagataatgggtatccaattggtagggtactacaatgtccgttcccatacccgtatttataaaaaatatccgtatccgtgcctgtatcctcgtgg 25938366  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
     |||||||||||||| | |||| |||||| | | | ||| ||||| |||||||| |||||||||    
T  25938367 acaacaactttagtccccttctccataccatgtgggtacttaagtacccatacccgcacccatt 25938430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 34459839 - 34459676
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||| |||||||||||| | ||||| ||| |||||| |||||| |||||| || | ||||||||||| ||||| |||||     
T  34459839 tagggatggcaatgggtacccaataggtagggtactataatgcccatcctcatacccgcatttttaaaaattatctgtatccgtgcccgtaccctcgtgt 34459740  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    |||||||||||||| ||||||  |||||| ||| | || |||||||| ||||| ||||| ||||    
T  34459739 gcaacaactttagtgtcattcctcataccctatgggtatctaagtgcacatacttgcactcatt 34459676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 29994222 - 29994335
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||  ||||| |||||| |||| ||| ||||||  ||||| |||||     
T  29994222 tagggatgacaatgagtactcaatgggtagggtactacaatgcccatccccatacccacatttgtaaaaattacctgtagccgtgctcgtaccttcgtgg 29994321  T
Q  255 gcaacaactttagt 268  Q
    ||||||||||||||    
T  29994322 gcaacaactttagt 29994335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 29406081 - 29405918
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    ||||||||||||||||||| |||||| |||||||||| ||| ||| ||||||||||  ||||| |||||||| | |||| ||| ||  ||||| |||||     
T  29406081 tagggatgacaatgggtacccaatggatagggtactatagtacccatccccataccctcatttgtaaaaaatgctcgtacccgagctcgtaccctcgtgg 29405982  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||  | |||  |||||  ||| |  |||||||||||||||||||||||||||    
T  29405981 gcaacaactttagtgcccttccccatactctatgggcacctaagtgcccatacctgcacccatt 29405918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 155 - 269
Target Start/End: Original strand, 8065867 - 8065981
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||  ||||||||||||||||||||||||| |||||||| | ||||||||||||||||| |||| ||||||| |||||  || |     
T  8065867 tagggatggcaatgggtatccaatgggtagggtactacagtgcccatccccatatctgcatttataaaaaatactcgtacccgtgcccgtacccacgcgg 8065966  T
Q  255 gcaacaactttagtc 269  Q
     ||||||||||||||    
T  8065967 acaacaactttagtc 8065981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 2721441 - 2721278
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||| ||||||||||||||  || || ||||||| || ||| ||||||||  | |||||||||||  |||| |||||     
T  2721441 tagggatggcaatgggtacccaatggatagggtactacagtatccatctccatacccgcgtttgtaaaaaatgtctgtatccgtgcccataccctcgtgg 2721342  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | |||  |||||| ||| | ||||| |||||||||||| ||| |||||    
T  2721341 gcaacaactttagtccccttccccataccctatgggtacctcagtgcccatacccgcatccatt 2721278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 175 - 318
Target Start/End: Original strand, 38000519 - 38000657
Alignment:
Q  175 caatgggtagggtactacagtgcccgtccccataccggcatttat-aaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctcat 273  Q
    |||||||||||||||||||||| ||||| ||||||| |||||||| ||||||||| ||||      || |||||  |||| ||||||||||||||||| |    
T  38000519 caatgggtagggtactacagtgtccgtctccatacccgcatttataaaaaaatactcgta------cccgtacccacgtgggcaacaactttagtctcct 38000612  T
Q  274 tctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||  |||||||||| | |||||||||||||||||| ||| |||||    
T  38000613 tccccataccttatgggtacctaagtgcccatacccgcatccatt 38000657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 318
Target Start/End: Original strand, 45097467 - 45097627
Alignment:
Q  158 ggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagca 257  Q
    ||||| |||||||||| |||||| |||||||||| ||| ||| ||||||||||  ||||| |||||||| |  ||| ||| ||| ||||| ||||| |||    
T  45097467 ggatggcaatgggtacccaatggatagggtactatagtacccatccccataccctcatttgtaaaaaatgctggtacccgagcccgtaccctcgtgggca 45097566  T
Q  258 acaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    |||||||||||  | |||| |||||| ||| |  ||||||||||| ||||| |||||||||    
T  45097567 acaactttagtgcccttctccataccctatgggcacctaagtgcctatacccgcacccatt 45097627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 203 - 318
Target Start/End: Original strand, 652195 - 652310
Alignment:
Q  203 cccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctcattctgcataccttattgatacctaagtgcc 302  Q
    |||||||| |||||||||||||||||||||| ||||||| ||||| ||||| ||||||||  ||||| | |||| |||||| ||| | ||||||||||||    
T  652195 cccatacccgcatttataaaaaatacccgtacccgtgcccgtaccttcgtgggcaacaacaatagtccccttctccataccctatgggtacctaagtgcc 652294  T
Q  303 catacctgcacccatt 318  Q
    | |||| |||| ||||    
T  652295 cttacccgcactcatt 652310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 157 - 308
Target Start/End: Complemental strand, 27586790 - 27586639
Alignment:
Q  157 gggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagc 256  Q
    ||||||||||||||||  | ||||||||||||||||| ||||| ||||  ||||  ||||| |||||||||||| || ||||||| ||||| ||||| |     
T  27586790 gggatgacaatgggtaacctatgggtagggtactacaatgcccttccctgtacctacatttgtaaaaaatacccttacccgtgcccgtaccttcgtgggg 27586691  T
Q  257 aacaactttagtctcattctgcataccttattgatacctaagtgcccatacc 308  Q
    |||||||||| |  | |||| |||||| ||| | ||||||| ||||||||||    
T  27586690 aacaactttactgccgttctccataccctatgggtacctaaatgcccatacc 27586639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 241
Target Start/End: Complemental strand, 54979347 - 54979262
Alignment:
Q  158 ggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataa--aaaatacccgtatccgtgcc 241  Q
    ||||| |||||||||| ||||||||||||||||||| |||||||||||||||| | ||||||||  |||||||||||| |||||||    
T  54979347 ggatggcaatgggtacccaatgggtagggtactacaatgcccgtccccatacccgtatttataaaaaaaatacccgtacccgtgcc 54979262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 268
Target Start/End: Complemental strand, 28234384 - 28234267
Alignment:
Q  151 cacatagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatc 250  Q
    ||||| |||||| |||||||||| |||||| |||||||||| |||  || |||||||||| |||||| ||||||||  ||||| ||||||| ||||| ||    
T  28234384 cacattgggatggcaatgggtacccaatggatagggtactatagtatccatccccatacccgcatttgtaaaaaatgtccgtacccgtgcccgtaccctc 28234285  T
Q  251 gtgagcaacaactttagt 268  Q
    |||  |||||||||||||    
T  28234284 gtggacaacaactttagt 28234267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 22829652 - 22829730
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgta 233  Q
    |||||||| |||||||||| ||||||||||||||||| ||| ||| |||||||||| || ||| |||||||||||||||    
T  22829652 tagggatggcaatgggtacccaatgggtagggtactatagtacccatccccatacccgcgtttgtaaaaaatacccgta 22829730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 283
Target Start/End: Original strand, 46080623 - 46080748
Alignment:
Q  158 ggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagca 257  Q
    ||||| |||||||||| |||||| |||||||||| ||| ||  ||||||||||  ||||| |||||||| |||||| | ||| | ||| | ||||| |||    
T  46080623 ggatggcaatgggtacccaatggatagggtactatagtaccaatccccataccctcatttgtaaaaaatgcccgtacctgtgtccgtagcctcgtgggca 46080722  T
Q  258 acaactttagtctcattctgcatacc 283  Q
    ||||||||||| ||||||| ||||||    
T  46080723 acaactttagtgtcattctccatacc 46080748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 306
Target Start/End: Original strand, 21245761 - 21245893
Alignment:
Q  175 caatgggtagggtactacagtgcccgtccccataccggcatttataaaaaa-tacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctcat 273  Q
    |||||||||||||||||||||| || |||||||||| |||||||||||||| | | |||| ||||||  |||   ||||| ||||||||| ||||| | |    
T  21245761 caatgggtagggtactacagtgtccatccccatacctgcatttataaaaaaattctcgtacccgtgcacgtattctcgtgggcaacaactgtagtcccct 21245860  T
Q  274 tctgcataccttattgatacctaagtgcccata 306  Q
    ||| |||||| ||| | || |||||||||||||    
T  21245861 tctccataccctatgggtatctaagtgcccata 21245893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 157 - 268
Target Start/End: Complemental strand, 2073818 - 2073707
Alignment:
Q  157 gggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagc 256  Q
    |||||| |||||| ||  |||||  |||||||||||| ||| | || ||||||| ||||||||||||| ||||||||| ||||| |||| | ||||| ||    
T  2073818 gggatggcaatggttatccaatgaatagggtactacaatgctcatctccatacccgcatttataaaaattacccgtattcgtgcttgtatcctcgtgggc 2073719  T
Q  257 aacaactttagt 268  Q
    ||||||||||||    
T  2073718 aacaactttagt 2073707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 266
Target Start/End: Original strand, 53140513 - 53140624
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||| |||||||||| |||  || ||||||||||  ||||| ||||||||  ||||| ||| ||| ||||| |||||     
T  53140513 tagggatggcaatgggtacccaatggatagggtactatagtatccatccccataccctcatttgtaaaaaatgtccgtacccgagcccgtaccctcgtgg 53140612  T
Q  255 gcaacaacttta 266  Q
    ||||||||||||    
T  53140613 gcaacaacttta 53140624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 157 - 269
Target Start/End: Complemental strand, 3098123 - 3098010
Alignment:
Q  157 gggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataa-aaaatacccgtatccgtgcctgtaccatcgtgag 255  Q
    |||||| ||||||||||  ||||| |||||||||||| |||||||||||||||  |||||||||| ||||||  |||| ||||||  ||| | ||||  |    
T  3098123 gggatggcaatgggtacctaatggatagggtactacaatgcccgtccccatactcgcatttataaaaaaatattcgtacccgtgctcgtatcttcgtagg 3098024  T
Q  256 caacaactttagtc 269  Q
    ||||||||||||||    
T  3098023 caacaactttagtc 3098010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 165 - 318
Target Start/End: Original strand, 39804183 - 39804335
Alignment:
Q  165 aatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactt 264  Q
    ||||||||  ||||||||||||||||| |||  || |||||||||| |||||| |||||||| | |||||||||||  ||||| ||||| ||||| | ||    
T  39804183 aatgggtatacaatgggtagggtactatagtatccatccccatacccgcatttgtaaaaaatgctcgtatccgtgcacgtaccttcgtgggcaac-agtt 39804281  T
Q  265 tagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||  | |||  |||||| ||| | ||| ||||| |||||||| |||||||||    
T  39804282 tagtgcccttccccataccctatgggtacttaagtacccatacccgcacccatt 39804335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 46258183 - 46258070
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||  ||||||||||||||||| ||||||| ||| ||||||  ||||| ||| |||||| | ||  |||| ||||||| || |||    
T  46258183 tagggatggcaatgggtatccaatgggtagggtactatagtgcccatcctcatacccacatttgtaagaaatactcatacacgtgtctgtaccctcatga 46258084  T
Q  255 gcaacaactttagt 268  Q
    | ||||||||||||    
T  46258083 gaaacaactttagt 46258070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 318
Target Start/End: Complemental strand, 22313543 - 22313400
Alignment:
Q  175 caatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctcatt 274  Q
    ||||||||||||||||||| ||||| |||||||| | ||||||  ||||| |||| ||| ||||||| ||||| || || | |||||||||||| || ||    
T  22313543 caatgggtagggtactacaatgcccatccccatatccgcattttaaaaaattacctgtacccgtgcccgtaccctcatgggaaacaactttagtgtcctt 22313444  T
Q  275 ctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    |  |||| | ||| | || ||||||| ||||||| |||| ||||    
T  22313443 ccccatatcctatgggtatctaagtgtccatacccgcactcatt 22313400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 268
Target Start/End: Original strand, 9608879 - 9608984
Alignment:
Q  162 gacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaa 261  Q
    |||||||| ||| ||||||||||||||||||||| ||| |||||||||   | ||||| |||||| |||||| | | ||| ||||| ||||| |||||||    
T  9608879 gacaatggatacccaatgggtagggtactacagtacccttccccatactatcgtttattaaaaatgcccgtacctgagcc-gtaccctcgtgggcaacaa 9608977  T
Q  262 ctttagt 268  Q
     ||||||    
T  9608978 ttttagt 9608984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 308
Target Start/End: Original strand, 14595277 - 14595355
Alignment:
Q  230 cgtatccgtgcctgtaccatcgtgagcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacc 308  Q
    ||||| || ||||||| | ||||| | |||||||||||| ||||||| |||||||||| || |||||||||| ||||||    
T  14595277 cgtatacgagcctgtatcctcgtgggtaacaactttagtgtcattctccataccttatggacacctaagtgctcatacc 14595355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 4757063 - 4757123
Alignment:
Q  165 aatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaa 225  Q
    ||||||||| |||||| ||||||||||||||| || | | |||||| ||||||||||||||    
T  4757063 aatgggtacccaatggatagggtactacagtgtccattctcatacccgcatttataaaaaa 4757123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 26340456 - 26340384
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaat 226  Q
    |||| |||| |||||||||| ||||||||||||||||| |||  || |||||||||| || ||| ||||||||    
T  26340456 atagagatggcaatgggtacccaatgggtagggtactatagtatccatccccatacccgcgtttgtaaaaaat 26340384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 31786322 - 31786398
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccg 231  Q
    ||||||||||||||||||  ||||||||||||||||| |||   | ||| |||||| || ||| |||||||||||||    
T  31786322 tagggatgacaatgggtatccaatgggtagggtactatagtattcatcctcatacccgcgtttgtaaaaaatacccg 31786398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 266
Target Start/End: Complemental strand, 52802474 - 52802362
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaa-tacccgtatccgtgcctgtaccatcgtg 253  Q
    |||||||| |||||||||| ||||||  ||||||||| |||  || ||||||||||  ||||| ||||||| |  ||||| ||| ||| ||||| |||||    
T  52802474 tagggatggcaatgggtacccaatggacagggtactatagtatccatccccataccctcatttgtaaaaaaatgtccgtacccgagcccgtaccctcgtg 52802375  T
Q  254 agcaacaacttta 266  Q
     ||||||||||||    
T  52802374 ggcaacaacttta 52802362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 41003254 - 41003299
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgt 201  Q
    |||||||| |||||||| | |||||||||||||||||||||||||||    
T  41003254 tagggatggcaatgggtcc-caatgggtagggtactacagtgcccgt 41003299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 44293194 - 44293140
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccatac 209  Q
    |||||||||||||||| || | ||| ||||||||||||| ||||| |||||||||    
T  44293194 tagggatgacaatgggcaccctatgagtagggtactacaatgcccttccccatac 44293140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 268
Target Start/End: Original strand, 33983059 - 33983152
Alignment:
Q  175 caatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagt 268  Q
    |||| |||||||||||||| ||||| || | ||| | |||||| |||||| |||| ||| ||||| | ||||| ||||| |||| |||||||||    
T  33983059 caataggtagggtactacaatgcccatctctatatctgcatttttaaaaattacctgtacccgtgtccgtaccctcgtgggcaataactttagt 33983152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 268
Target Start/End: Original strand, 7261926 - 7262037
Alignment:
Q  156 agggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgag 255  Q
    ||||||| |||||||||| || || | | ||||||| ||| ||| |||| ||| | || ||| |||||||||||||||  || |||  |||||||||| |    
T  7261926 agggatggcaatgggtacccagtgagcaaggtactatagtacccatccctatatccgcgtttgtaaaaaatacccgtactcgggcc-ctaccatcgtggg 7262024  T
Q  256 caacaactttagt 268  Q
    |||||||||||||    
T  7262025 caacaactttagt 7262037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 5e-44; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 156 - 318
Target Start/End: Complemental strand, 31440850 - 31440688
Alignment:
Q  156 agggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgag 255  Q
    ||||||| |||||||||| ||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||| ||||||| ||||| ||||| |    
T  31440850 agggatggcaatgggtacccaatgggtagggtactacaatgcccgtcccaatacccgcatttataaaaaatacccgtacccgtgcccgtaccctcgtggg 31440751  T
Q  256 caacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||| |||||||||| | |||| |||||| |||   |||||||||||||||||| |||||||||    
T  31440750 caataactttagtccccttctccataccctatgtgtacctaagtgcccatacccgcacccatt 31440688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 25424643 - 25424806
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||||| || ||||||||||||| |||||||||||||||| ||||| ||||||| ||||| |||||     
T  25424643 tagggatggcaatgggtacccaatgggtagggtactacaatgtccgtccccatacccgcatttataaaaaatatccgtacccgtgcccgtaccctcgtgg 25424742  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | |||  |||||| ||| | ||| || || |||||||| |||||||||    
T  25424743 gcaacaactttagtccccttccccataccctatgggtacttaggtacccatacccgcacccatt 25424806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 33867761 - 33867598
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||||| || ||||||||||||| |||||||||||||||| ||||| ||||||| ||||| |||||     
T  33867761 tagggatggcaatgggtacccaatgggtagggtactacaatgtccgtccccatacccgcatttataaaaaatatccgtacccgtgcccgtaccctcgtgg 33867662  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | |||  |||||| ||| | ||| || || |||||||| |||||||||    
T  33867661 gcaacaactttagtccccttccccataccctatgggtacttaggtacccatacccgcacccatt 33867598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 38620281 - 38620444
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||| |||||||  |||| || ||     
T  38620281 tagggatggcaatgggtactcaatgggtagggtactacaatgcccatccccatacctgcatttataaaaaatacccgtacccgtgcccataccctcatgg 38620380  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | |||  |||||| ||| | ||| |||||  ||||||| |||||||||    
T  38620381 gcaacaactttagtccccttccccataccctatgggtacttaagtatccatacccgcacccatt 38620444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 155 - 313
Target Start/End: Complemental strand, 44070621 - 44070462
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataa-aaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||  |||| | |||||||||| |||||||||||| ||||||| ||||| |||||    
T  44070621 tagggatggcaatgggtactcaatgggtagggtactacagtgcccgtcttcatatccgcatttataaaaaaatacccgtacccgtgcccgtaccctcgtg 44070522  T
Q  254 agcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcac 313  Q
     ||||||||||||||| | ||   |||||| ||| | |||||||||||||||||| ||||    
T  44070521 ggcaacaactttagtcccctttcccataccctatgggtacctaagtgcccatacccgcac 44070462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 165 - 318
Target Start/End: Original strand, 3329090 - 3329243
Alignment:
Q  165 aatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactt 264  Q
    ||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||| ||||| ||||| ||||||||||    
T  3329090 aatgggtatccaatgggtagggtactacagtgcccgtccccatacccgcatttataaaaaatacccgtacccatgcccgtaccctcgtgggcaacaactt 3329189  T
Q  265 tagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||| | |||  |||||  ||| | |||||||||| | ||||| |||||||||    
T  3329190 tagtccctttccccatactctatgggtacctaagtgtctatacccgcacccatt 3329243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 32422956 - 32422793
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||| || ||||||||| |||||||||||||||| ||||||||||||||||  |||| ||||||| ||||| |||||     
T  32422956 tagggatggcaatgggtacccaatggatacggtactacaatgcccgtccccatacccgcatttataaaaaatattcgtacccgtgcccgtaccctcgtgg 32422857  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | |||  |||||| ||| | ||| ||||| |||||||| |||||||||    
T  32422856 gcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccgcacccatt 32422793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 4480951 - 4481108
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||      || ||||| |||||     
T  4480951 tagggatggcaatgggtacccaatgggtaaggtactacaatgcccgtccccatacccgcatttataaaaaatacccgta------cccgtaccctcgtgg 4481044  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | |||  |||||| ||| | ||| |||||| ||||||| |||||||||    
T  4481045 gcaacaactttagtccccttccccataccctatgggtacttaagtgtccatacccgcacccatt 4481108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 23231626 - 23231783
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||   ||||||||||||||||||||      || ||||| |||||     
T  23231626 tagggatggcaatgggtacccaatgggtagggtactacaatgcccgtccccatacccaaatttataaaaaatacccgta------cccgtaccctcgtgg 23231719  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||| ||||| | |||  |||||| ||| | ||| |||||||||||||| |||||||||    
T  23231720 gcaacaactgtagtccccttccccataccctatgggtacttaagtgcccatacccgcacccatt 23231783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 668186 - 668023
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||| ||| ||||||  ||||| |||||| ||| |||| ||||||| ||| | |||||     
T  668186 tagggatggcaatgggtacccaatgggtagggtactacaatgcccatcctcatacccacatttgtaaaaattactcgtacccgtgcccgtatcctcgtgg 668087  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||  | |||  |||| | ||| | |||||||||||||||||| |||||||||    
T  668086 gcaacaactttagtgcccttccccatatcctatgggtacctaagtgcccatacccgcacccatt 668023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 313
Target Start/End: Original strand, 20936936 - 20937092
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| ||||||| || | ||||||||||||||||||||||| ||| |||||| | |||| ||||||||||||||| |||||  |||||| |||||     
T  20936936 tagggatggcaatgggcaccctatgggtagggtactacagtgcccatcctcatacccgtatttgtaaaaaatacccgtacccgtgtttgtaccctcgtg- 20937034  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcac 313  Q
    | |||||||||||| || |||  |||||| ||| | |||||||||| ||||||| ||||    
T  20937035 ggaacaactttagtgtccttccccatacc-tatgggtacctaagtgtccatacccgcac 20937092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 30241331 - 30241481
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||  ||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||            ||||      
T  30241331 tagggatggcaatgggtatccaatgagtagggtactacagtgcccgt-cccatacccgcatttataaaaaatacccggatcc------------tcgtcg 30241417  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||||| |||| |||||| ||| | |||||||||||||||||  |||||||||    
T  30241418 gcaacaactttagtctccttctccataccctatgggtacctaagtgcccatactcgcacccatt 30241481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 41935740 - 41935577
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    ||||||||||||||||||  ||||||| ||||||||| ||| ||| || ||||||| || ||| ||||||||| | ||| ||| | | ||||| |||||     
T  41935740 tagggatgacaatgggtatccaatgggcagggtactatagtacccatctccatacccgcgtttgtaaaaaatatctgtacccgggtccgtaccctcgtgg 41935641  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    |||||||||||||| || |||  |||||| ||| |  |||||||||| |||||| |||||||||    
T  41935640 gcaacaactttagtgtccttcctcataccctatgggcacctaagtgctcatacccgcacccatt 41935577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 318
Target Start/End: Original strand, 9205066 - 9205230
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    ||||||||| |||||||| | |||| ||||||||||| ||||||||||| ||||| | |||||||||||||||||  ||| ||||| | ||| | |||||    
T  9205066 atagggatggcaatgggtgcccaataggtagggtactgcagtgcccgtctccataaccgcatttataaaaaatacttgtacccgtgtccgtatcctcgtg 9205165  T
Q  254 agcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
     | || |||||| ||| | |||  |||||| |||   |||||||||||||||||| ||| |||||    
T  9205166 ggtaataactttggtccccttccccataccctatgagtacctaagtgcccatacccgcatccatt 9205230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 35048513 - 35048675
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||| ||| |||||| |||||||||| |||  || |||||||||| || ||| |||||||| | |||| ||||||| ||||| |||||     
T  35048513 tagggatggcaatggatacccaatgg-tagggtactatagtatccatccccatacccgcgtttgtaaaaaatgctcgtacccgtgcccgtaccctcgtgg 35048611  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||  | |||  |||| | ||| |  || |||||||||||||| |||||||||    
T  35048612 gcaacaactttagtgcccttccccatatcctatgggcacttaagtgcccatacccgcacccatt 35048675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 11788513 - 11788626
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| ||||||||||||||||||||||||| || |||  || |||||||||| || ||| |||||| | | | || ||||||| ||||| |||||     
T  11788513 tagggatggcaatgggtactcaatgggtagggtattatagtatccatccccatacccgcgtttgtaaaaagtgcgcatacccgtgcccgtaccctcgtgg 11788612  T
Q  255 gcaacaactttagt 268  Q
    ||||||| ||||||    
T  11788613 gcaacaattttagt 11788626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 266
Target Start/End: Original strand, 4289529 - 4289640
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||| |||||||||| |||  |  ||||||||||  ||||| ||||||||  ||||| ||| ||| ||||| |||||     
T  4289529 tagggatggcaatgggtacccaatggatagggtactatagtatctatccccataccctcatttgtaaaaaatgtccgtacccgagcccgtaccctcgtgg 4289628  T
Q  255 gcaacaacttta 266  Q
    ||||||||||||    
T  4289629 gcaacaacttta 4289640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 318
Target Start/End: Complemental strand, 4592388 - 4592246
Alignment:
Q  177 atgggtagggtactacagtgcccgtccccataccggcatttat-aaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctcattc 275  Q
    ||||||||||||||||||||||| ||| |||||| |||||| | ||||||||| || | ||||||  ||||| ||||  ||||||||||||||  | |||    
T  4592388 atgggtagggtactacagtgcccttcctcataccagcatttgtaaaaaaatacacgcacccgtgctcgtaccctcgtcggcaacaactttagtgcccttc 4592289  T
Q  276 tgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
      | |||||||| | |||||||||| |||| |  |||||||||    
T  4592288 ctcgtaccttatgggtacctaagtgtccatgctcgcacccatt 4592246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 164 - 318
Target Start/End: Complemental strand, 29546302 - 29546148
Alignment:
Q  164 caatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaact 263  Q
    |||||||||| |||||| |||||||||| ||| ||| ||||||||||  | ||| ||||||||||||||| |||  || ||| | ||||| |||||||||    
T  29546302 caatgggtacccaatggatagggtactatagtacccatccccatacccacgtttgtaaaaaatacccgtacccggacccgtatcctcgtgggcaacaact 29546203  T
Q  264 ttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    | | |  | |||  |||||| ||| |  ||||||||| ||||||| |||||||||    
T  29546202 tcattgcccttccccataccctatgggcacctaagtgtccatacccgcacccatt 29546148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 15234199 - 15234312
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    ||||||||| ||||||||| ||||||||||||||||| ||| |||   |||||||  || ||| ||||||||  ||||| ||| ||| ||||  |||||     
T  15234199 tagggatgaaaatgggtacccaatgggtagggtactatagtacccaatcccatactcgcgtttgtaaaaaatgtccgtacccgagcccgtactctcgtgg 15234298  T
Q  255 gcaacaactttagt 268  Q
    ||||||||||||||    
T  15234299 gcaacaactttagt 15234312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 18974604 - 18974683
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgta 233  Q
    ||||||||| ||||||||||  || ||||||||||||| ||| ||| |||||||||| || |||  ||||||||||||||    
T  18974604 atagggatggcaatgggtacataacgggtagggtactatagtacccatccccatacccgcgtttgcaaaaaatacccgta 18974683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 225
Target Start/End: Complemental strand, 16711559 - 16711489
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaa 225  Q
    ||||||||||||||| |||   ||||||||||||||||||||||| ||||| |||| || ||| |||||||    
T  16711559 tagggatgacaatggataccttatgggtagggtactacagtgcccttccccctacccgcgtttgtaaaaaa 16711489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 318
Target Start/End: Complemental strand, 13142748 - 13142624
Alignment:
Q  194 gtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctcattctgcataccttattgatac 293  Q
    ||||||||||| ||||| |||||||||||||||||  |||  |||| | ||||| || || ||||||||||||||| | |||  |||||| |||   |||    
T  13142748 gtgcccgtccctatacccgcatttataaaaaatacttgtagtcgtgtccgtaccctcttgggcaacaactttagtccccttccccataccctatgagtac 13142649  T
Q  294 ctaagtgcccatacctgcacccatt 318  Q
     ||||| |||||||| ||| |||||    
T  13142648 ttaagtacccatacccgcatccatt 13142624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 25667356 - 25667434
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgta 233  Q
    |||| |||||||||||||  ||||||||||||||||| | | ||| ||||| |||| || ||| ||||||||| |||||    
T  25667356 taggaatgacaatgggtatccaatgggtagggtactataatacccttccccgtacccgcgtttgtaaaaaatatccgta 25667434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 3e-42; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 1376078 - 1376241
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    ||||||||| ||||||||| ||||||||||| |||||||||||| ||||| ||||| ||||||||||||||||| |||| ||||||| ||||| |||||     
T  1376078 tagggatgataatgggtacccaatgggtaggatactacagtgccggtccctatacctgcatttataaaaaatactcgtacccgtgcccgtaccttcgtgg 1376177  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| |||||   ||||| ||| | |||||||||||||||||| |||||||||    
T  1376178 gcaacaactttagtcccattccttataccctatgggtacctaagtgcccatacccgcacccatt 1376241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 156 - 318
Target Start/End: Original strand, 24789406 - 24789568
Alignment:
Q  156 agggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgag 255  Q
    ||||||| ||||||||||  |||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||| ||||||| ||||| ||||| |    
T  24789406 agggatggcaatgggtaccaaatgggtagggtactacaatgcccgtcctcatacccgcatttataaaaaatacccgtacccgtgcccgtaccttcgtggg 24789505  T
Q  256 caacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    |||||||||||||| | |||  |||||| ||| | ||| |||||| ||||||| |||||||||    
T  24789506 caacaactttagtccccttcctcataccctatgggtacttaagtgtccatacccgcacccatt 24789568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 156 - 307
Target Start/End: Complemental strand, 3617079 - 3616928
Alignment:
Q  156 agggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgag 255  Q
    ||||||| |||||||| | ||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||| ||||||| ||||| ||||| |    
T  3617079 agggatggcaatgggtgcccaatgggtagggtactatagtgcccgtccccatacccgcatttataaaaaatactcgtacccgtgcccgtaccctcgtggg 3616980  T
Q  256 caacaactttagtctcattctgcataccttattgatacctaagtgcccatac 307  Q
    |||||||||||||| | |||  |||||| ||| | ||||||||| |||||||    
T  3616979 caacaactttagtccccttccccataccctatgggtacctaagtacccatac 3616928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 155 - 307
Target Start/End: Complemental strand, 37226988 - 37226836
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||| ||| ||||||||||||||||||||| ||| |||||||||| |||||| |||||||| |||||| ||| ||||||||| || ||     
T  37226988 tagggatggcaatggatacccaatgggtagggtactacagtacccttccccatacccgcatttgtaaaaaatgcccgtacccgagcctgtaccctcctgg 37226889  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatac 307  Q
    | |||||||||||| ||||||  |||||| ||| |  ||||||||||||||||    
T  37226888 gtaacaactttagtgtcattccccataccctatgggcacctaagtgcccatac 37226836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 175 - 318
Target Start/End: Complemental strand, 2621156 - 2621013
Alignment:
Q  175 caatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctcatt 274  Q
    ||||||||||||||||||| ||||| | |||||||| |||||| |||||| ||||||||  |||| | ||||| ||||| ||||||||||||||  ||||    
T  2621156 caatgggtagggtactacaatgcccattcccatacccgcatttttaaaaattacccgtactcgtgtccgtaccctcgtgggcaacaactttagtgccatt 2621057  T
Q  275 ctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    |  |||||| ||| | || |||||||||||||||||||||||||    
T  2621056 ccccataccctatgggtatctaagtgcccatacctgcacccatt 2621013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 317
Target Start/End: Complemental strand, 2472496 - 2472334
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||  ||||||||||||||||||| ||||| || ||||||| |||||| |||||| || || |||||||||| ||||| |||||     
T  2472496 tagggatggcaatgggtatccaatgggtagggtactacaatgcccatctccatacccgcatttgtaaaaattatccatatccgtgcccgtaccctcgtgg 2472397  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccat 317  Q
     |||||||||||||  |||||  |||||| ||| | ||| |||||||||||||| ||| ||||    
T  2472396 acaacaactttagtgccattccccataccctatgggtacataagtgcccatacccgcatccat 2472334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 7579950 - 7580113
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| ||||||| || ||||||||||||||||| ||| ||| |||||||||| |  ||| ||||||||  ||||| ||||||| ||||| |||||     
T  7579950 tagggatggcaatgggcacccaatgggtagggtactatagtacccatccccatacccgtgtttgtaaaaaatggccgtacccgtgcccgtaccctcgtgg 7580049  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    | ||||||||||||  | |||  |||||| ||| |  ||||||||||||||||| |||||||||    
T  7580050 gtaacaactttagtgcccttccccataccctatgggcacctaagtgcccatacccgcacccatt 7580113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 19643729 - 19643566
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    ||||||||  ||||||||| ||||||||||||||||| | ||| | || ||||||| |||||| |||||| |||||||| ||||||| ||||| |||||     
T  19643729 tagggatggtaatgggtacccaatgggtagggtactataatgctcatctccatacctgcatttgtaaaaattacccgtacccgtgcccgtaccttcgtgg 19643630  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||  | |||  |||||| ||| | || ||| ||||||||||| || ||||||    
T  19643629 gcaacaactttagtgcccttcctcataccctatgggtatctaggtgcccatacccgcgcccatt 19643566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 315
Target Start/End: Original strand, 20216100 - 20216260
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||| |||||||||| ||| ||| ||||||||    ||||| ||||||||  ||||| ||| ||| ||||| |||||     
T  20216100 tagggatggcaatgggtacccaatggatagggtactatagtacccatccccataagctcatttgtaaaaaatgtccgtacccgagcccgtaccctcgtgg 20216199  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcaccc 315  Q
    ||||||||||||||  | |||  |||| ||||| |  || |||||||||||||||||||||    
T  20216200 gcaacaactttagtgcccttccccatatcttatgggcacttaagtgcccatacctgcaccc 20216260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 315
Target Start/End: Original strand, 20235698 - 20235858
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||| |||||||||| ||| ||| ||||||||    ||||| ||||||||  ||||| ||| ||| ||||| |||||     
T  20235698 tagggatggcaatgggtacccaatggatagggtactatagtacccatccccataagctcatttgtaaaaaatgtccgtacccgagcccgtaccctcgtgg 20235797  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcaccc 315  Q
    ||||||||||||||  | |||  |||| ||||| |  || |||||||||||||||||||||    
T  20235798 gcaacaactttagtgcccttccccatatcttatgggcacttaagtgcccatacctgcaccc 20235858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 24891634 - 24891470
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacag-tgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    |||||||| ||||||||||  ||||||||||||||||||  ||||| |||||||||| |||||| |||||| ||| |||| ||||||  ||||| |||||    
T  24891634 tagggatggcaatgggtacctaatgggtagggtactacaaatgcccatccccatacccgcatttgtaaaaattactcgtacccgtgctcgtaccgtcgtg 24891535  T
Q  254 agcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
      |||||||||||||  | ||   |||||| ||| | ||||||||||||  |||| |||||||||    
T  24891534 gacaacaactttagtaccctttcccataccctatgggtacctaagtgcctgtacccgcacccatt 24891470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 1667161 - 1667238
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgt 232  Q
    |||||||| ||||||||||  |||||||||||||||||| ||||| |||||||||| |||||||| |||| |||||||    
T  1667161 tagggatggcaatgggtaccaaatgggtagggtactacaatgcccatccccatacccgcatttattaaaattacccgt 1667238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 307
Target Start/End: Original strand, 7057497 - 7057650
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    ||||||||  |||||||||||| ||||||||||||||||||||||| || | ||| | |||||| ||||||||||| |||| |||||| ||| | |||||    
T  7057497 atagggatagcaatgggtactctatgggtagggtactacagtgcccttctctatatctgcatttgtaaaaaatacctgtattcgtgcccgtatcctcgtg 7057596  T
Q  254 agcaacaactttagtctcattctgcataccttattgatacctaagtgcccatac 307  Q
      ||||||| || ||  | |||  |||||| ||| | ||||||||||| |||||    
T  7057597 gacaacaaccttggtgcccttccccataccctatgggtacctaagtgcacatac 7057650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 318
Target Start/End: Original strand, 25500057 - 25500202
Alignment:
Q  173 ctcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctca 272  Q
    |||||| |||||||||||| | ||||| |||| | ||| |||||| |||| | ||||||||  |||||| ||||  |||||  |||||||||||||  |     
T  25500057 ctcaataggtagggtactataatgcccatcccgaaacccgcatttgtaaatattacccgtactcgtgcccgtactgtcgtggacaacaactttagtaccc 25500156  T
Q  273 ttctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    |||  |||||||||| | |||||||||||||||||| |||||||||    
T  25500157 ttccccataccttatgggtacctaagtgcccatacccgcacccatt 25500202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 154 - 318
Target Start/End: Original strand, 221874 - 222039
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaa-tacccgtatccgtgcctgtaccatcgt 252  Q
    |||||||||  ||||||||| |||||||||||||| || |||  || || ||||||| || ||| ||||||| || ||||| |||  || ||||| ||||    
T  221874 atagggatggtaatgggtacccaatgggtagggtattatagtatccatctccatacccgcgtttgtaaaaaaatatccgtacccgaacccgtaccctcgt 221973  T
Q  253 gagcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    | |||||||||||||| || |||  |||||| ||| |  |||||||||| |||||| |||||||||    
T  221974 gggcaacaactttagtgtccttccccataccctatgggcacctaagtgctcatacccgcacccatt 222039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 154 - 318
Target Start/End: Original strand, 691029 - 691194
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaa-tacccgtatccgtgcctgtaccatcgt 252  Q
    |||||||||  ||||||||| |||||||||||||| || |||  || || ||||||| || ||| ||||||| || ||||| |||  || ||||| ||||    
T  691029 atagggatggtaatgggtacccaatgggtagggtattatagtatccatctccatacccgcgtttgtaaaaaaatatccgtacccgaacccgtaccctcgt 691128  T
Q  253 gagcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    | |||||||||||||| || |||  |||||| ||| |  |||||||||| |||||| |||||||||    
T  691129 gggcaacaactttagtgtccttccccataccctatgggcacctaagtgctcatacccgcacccatt 691194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 154 - 318
Target Start/End: Original strand, 735497 - 735662
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaa-tacccgtatccgtgcctgtaccatcgt 252  Q
    |||||||||  ||||||||| |||||||||||||| || |||  || || ||||||| || ||| ||||||| || ||||| |||  || ||||| ||||    
T  735497 atagggatggtaatgggtacccaatgggtagggtattatagtatccatctccatacccgcgtttgtaaaaaaatatccgtacccgaacccgtaccctcgt 735596  T
Q  253 gagcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    | |||||||||||||| || |||  |||||| ||| |  |||||||||| |||||| |||||||||    
T  735597 gggcaacaactttagtgtccttccccataccctatgggcacctaagtgctcatacccgcacccatt 735662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 154 - 318
Target Start/End: Original strand, 859393 - 859558
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaa-tacccgtatccgtgcctgtaccatcgt 252  Q
    |||||||||  ||||||||| |||||||||||||| || |||  || || ||||||| || ||| ||||||| || ||||| |||  || ||||| ||||    
T  859393 atagggatggtaatgggtacccaatgggtagggtattatagtatccatctccatacccgcgtttgtaaaaaaatatccgtacccgaacccgtaccctcgt 859492  T
Q  253 gagcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    | |||||||||||||| || |||  |||||| ||| |  |||||||||| |||||| |||||||||    
T  859493 gggcaacaactttagtgtccttccccataccctatgggcacctaagtgctcatacccgcacccatt 859558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 6109515 - 6109678
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| ||||||||||  ||||  |||||||||||| || || |||||||||| |||||||| |||| |||  |||||||||   ||| | |||||     
T  6109515 tagggatggcaatgggtacctaatgcatagggtactacaatgtccatccccatacctgcatttattaaaattacttgtatccgtgttcgtatcttcgtgg 6109614  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||  | ||    ||||| ||| | ||||||||||| |||||| |||||||||    
T  6109615 gcaacaactttagtgccttttccaataccctatgggtacctaagtgctcatacccgcacccatt 6109678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 262
Target Start/End: Original strand, 30801140 - 30801248
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttat-aaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    ||||||||||||||||||| | || | |||||||||| ||||||| | |||||||| | |||| | |||||||||||||| | ||| | ||||| ||| |    
T  30801140 tagggatgacaatgggtaccctatagatagggtactatagtgccctttcccatacccgtatttgtaaaaaaatacccgtacctgtgtccgtaccctcgag 30801239  T
Q  254 agcaacaac 262  Q
     ||||||||    
T  30801240 ggcaacaac 30801248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 268
Target Start/End: Original strand, 43239077 - 43239188
Alignment:
Q  157 gggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagc 256  Q
    ||||||||||| ||||||| |||| ||||| |||||| || |  ||| |||||  || ||| |||||| || ||||||||| ||| ||| | ||||| ||    
T  43239077 gggatgacaattggtactctatggatagggaactacaatgtcattcctcatactcgcgtttgtaaaaattagccgtatccgagcccgtatcttcgtgggc 43239176  T
Q  257 aacaactttagt 268  Q
    ||||||||||||    
T  43239177 aacaactttagt 43239188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 318
Target Start/End: Original strand, 1667243 - 1667312
Alignment:
Q  249 tcgtgagcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||| ||||||||||||||  | |||  |||||| ||| | |||||||||||||||||| |||||||||    
T  1667243 tcgtgggcaacaactttagtgcccttccccataccctatgggtacctaagtgcccatacccgcacccatt 1667312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 39221762 - 39221649
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||| |||||||||||||| |||| || |||||||||  || ||| |||||||||| |  ||| |||||||| |  ||| ||| ||| ||||| |||||     
T  39221762 taggaatgacaatgggtacccaataggcagggtactatcgtacccatccccatacccgtgtttgtaaaaaatgcatgtacccgagcccgtaccctcgtgg 39221663  T
Q  255 gcaacaactttagt 268  Q
     |||||||||||||    
T  39221662 tcaacaactttagt 39221649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 38546829 - 38546913
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtg 239  Q
    |||||||| |||||||||||||||| ||| ||||||| |||  || || ||||| | || ||| |||||||| | ||||||||||    
T  38546829 tagggatggcaatgggtactcaatgagtatggtactatagtatccatctccataaccgcgtttgtaaaaaatgctcgtatccgtg 38546913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 154 - 318
Target Start/End: Complemental strand, 240682 - 240518
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||| |||||    
T  240682 atagggatggcaatgggtacccaatgggtagggtattacagtgcccgtccccatacccgcatttataaaaaatacccgtacccgtgcccgtaccctcgtg 240583  T
Q  254 agcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
     ||||||| ||||||| | |||  |||| | ||| | ||||| |||||||||||| ||| |||||    
T  240582 ggcaacaattttagtccccttccccatatcctatgggtacctcagtgcccatacccgcatccatt 240518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 308
Target Start/End: Complemental strand, 222101 - 222023
Alignment:
Q  230 cgtatccgtgcctgtaccatcgtgagcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacc 308  Q
    ||||| || ||||||| | ||||| | |||||||||||| ||||||| |||||||||| || |||||||||| ||||||    
T  222101 cgtatacgagcctgtatcctcgtgggtaacaactttagtgtcattctccataccttatggacacctaagtgctcatacc 222023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 7e-40; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 1329772 - 1329609
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||  ||||||| |||||||||||||| ||||||||||||| ||||||||||||||||| |||| |||||||  |||| |||||     
T  1329772 tagggatggcaatgggtatccaatgggcagggtactacagtgtccgtccccatacccgcatttataaaaaatactcgtacccgtgcccttaccctcgtgg 1329673  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    ||||||||||||||| | |||  |||||| ||| ||||||||||||||||||||  ||||||||    
T  1329672 gcaacaactttagtccccttccccataccctatggatacctaagtgcccatacccacacccatt 1329609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 153 - 318
Target Start/End: Complemental strand, 20691801 - 20691636
Alignment:
Q  153 catagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgt 252  Q
    |||||||||| ||||||| || ||||||||||||||||||||||||||||||  || | |||||||||||||||| ||||| ||||| | ||||| ||||    
T  20691801 catagggatggcaatgggcacccaatgggtagggtactacagtgcccgtccctctatccgcatttataaaaaatatccgtacccgtgtccgtaccctcgt 20691702  T
Q  253 gagcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    | ||||||||||||||| | |||  |||||| ||| | |||||||||||||||||| |||||||||    
T  20691701 gggcaacaactttagtccccttccccataccctatgggtacctaagtgcccatacccgcacccatt 20691636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 154 - 318
Target Start/End: Complemental strand, 13534404 - 13534239
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataa-aaaatacccgtatccgtgcctgtaccatcgt 252  Q
    ||||||||| |||||||||| ||||||||||||||||||| ||||| |||||||||| |||||||||| |||||||| ||| ||||| | ||||| ||||    
T  13534404 atagggatggcaatgggtacccaatgggtagggtactacaatgcccatccccatacccgcatttataaaaaaatacctgtacccgtgtccgtaccctcgt 13534305  T
Q  253 gagcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    | ||||||||||||||| |||||  |||||| ||| | ||| ||||| |||||||| |||||||||    
T  13534304 gggcaacaactttagtcccattccccataccatatgggtacttaagtacccatacccgcacccatt 13534239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 155 - 313
Target Start/End: Complemental strand, 31784183 - 31784025
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||| |||||| ||||||||||||||||| ||||  |||||| ||||| ||||      
T  31784183 tagggatgtcaatgggtactcgatgggtagggtactacaatgcccgtcctcatacccgcatttataaaaaatacacgtacacgtgcccgtaccctcgtac 31784084  T
Q  255 gcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcac 313  Q
    ||||||||||||||| | |||  |||||| ||| | ||||||||||| |||||| ||||    
T  31784083 gcaacaactttagtccccttccccataccctatgggtacctaagtgctcatacccgcac 31784025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 154 - 314
Target Start/End: Original strand, 6337132 - 6337292
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    ||||||||| |||||||||| ||||||||||||||||| ||||||| ||||||||||  ||||| ||| ||||| || || ||||||  ||||| |||||    
T  6337132 atagggatggcaatgggtacccaatgggtagggtactatagtgcccatccccatacccacatttgtaagaaatatccatacccgtgctcgtaccctcgtg 6337231  T
Q  254 agcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacc 314  Q
     ||||||||||||||  |||||  |||||| ||| | |||||||||||||||||| |||||    
T  6337232 ggcaacaactttagtgccattccccataccctatgggtacctaagtgcccatacccgcacc 6337292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 154 - 269
Target Start/End: Original strand, 33331499 - 33331614
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    ||||||||| |||||||||| |||||| |||||||||||| || ||||| ||||||| |||||||||||||||||||||| ||||||| ||||| | |||    
T  33331499 atagggatggcaatgggtacccaatggatagggtactacaatgtccgtctccatacccgcatttataaaaaatacccgtacccgtgcccgtacccttgtg 33331598  T
Q  254 agcaacaactttagtc 269  Q
     |||||||||||||||    
T  33331599 ggcaacaactttagtc 33331614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 155 - 318
Target Start/End: Original strand, 31070696 - 31070859
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttat-aaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    |||||||| |||||||||| ||||| |||||||||||||||||||||  ||||||| |||||||| ||||||||||||||  |||||| ||||| |||||    
T  31070696 tagggatggcaatgggtacccaatgagtagggtactacagtgcccgt-tccatacccgcatttataaaaaaatacccgtacacgtgcccgtaccctcgtg 31070794  T
Q  254 agcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    | |||||||||||||| | ||    || || ||| | |||||||||||||||||| |||||||||    
T  31070795 aacaacaactttagtcccctttccaatcccctatgggtacctaagtgcccatacccgcacccatt 31070859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 153 - 318
Target Start/End: Original strand, 33328486 - 33328651
Alignment:
Q  153 catagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgt 252  Q
    |||||||||| |||||||||| |||||| |||||||||||| || ||||| ||||||| |||||||||||||||| | ||| ||||||| ||||| | ||    
T  33328486 catagggatggcaatgggtacccaatggatagggtactacaatgtccgtctccatacccgcatttataaaaaatatctgtacccgtgcccgtacccttgt 33328585  T
Q  253 gagcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
    | ||||||||||||||| | |||  |||||| ||| | ||| |||||  ||||||| |||| ||||    
T  33328586 gggcaacaactttagtccccttccccataccctatgggtacttaagtaaccatacccgcactcatt 33328651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 175 - 313
Target Start/End: Complemental strand, 29641643 - 29641505
Alignment:
Q  175 caatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctcatt 274  Q
    |||||||||||||||||||| | ||||||||||| | ||||||||||||||||||| || ||||||| ||||| |||||  |||||||||||||| |  |    
T  29641643 caatgggtagggtactacagcgtccgtccccatatccgcatttataaaaaatacccatacccgtgcccgtaccctcgtggacaacaactttagtcgccat 29641544  T
Q  275 ctgcataccttattgatacctaagtgcccatacctgcac 313  Q
    |  |||||| ||| |  ||||||||||||||||| ||||    
T  29641543 ccccataccatatgggcacctaagtgcccatacccgcac 29641505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 6937957 - 6938034
Alignment:
Q  156 agggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgta 233  Q
    ||||||| |||||||||| | ||||||||||||||||| ||||| |||||||||| |||||| |||||| ||||||||    
T  6937957 agggatggcaatgggtaccctatgggtagggtactacaatgcccatccccatacccgcatttgtaaaaattacccgta 6938034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 318
Target Start/End: Complemental strand, 9062357 - 9062193
Alignment:
Q  155 tagggatgacaatgggtactc-aatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtg 253  Q
    |||||||| |||||||||| | ||||| |||||||||| |||  || |||||||||| || ||| |||||||| |||||| ||||| | ||||| |||||    
T  9062357 tagggatggcaatgggtaccccaatggatagggtactatagtatccatccccatacccgcgtttgtaaaaaatgcccgtacccgtgtccgtaccctcgtg 9062258  T
Q  254 agcaacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcacccatt 318  Q
      |||||||||||||  | |||  |||||| ||| |  || |||||||||||||| |||||||||    
T  9062257 gacaacaactttagtgcccttccccataccctatgggcacttaagtgcccatacccgcacccatt 9062193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 266
Target Start/End: Complemental strand, 24447335 - 24447224
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||| |||||||||| |||  || ||||||||||  ||||| ||||||||  ||||| ||| ||| ||||| |||||     
T  24447335 tagggatggcaatgggtacccaatggatagggtactatagtatccatccccataccctcatttgtaaaaaatgtccgtacccgagcccgtaccctcgtgg 24447236  T
Q  255 gcaacaacttta 266  Q
    ||||||||||||    
T  24447235 gcaacaacttta 24447224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 266
Target Start/End: Complemental strand, 1221924 - 1221813
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    |||||||| |||||||||| |||||| |||||||||| |||  || ||||||||||  ||||| ||||||||  ||||| ||| ||| ||||| | |||     
T  1221924 tagggatggcaatgggtacccaatggatagggtactatagtatccatccccataccctcatttgtaaaaaatgtccgtacccgagcccgtacccttgtgg 1221825  T
Q  255 gcaacaacttta 266  Q
     |||||||||||    
T  1221824 acaacaacttta 1221813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 269
Target Start/End: Complemental strand, 31511822 - 31511727
Alignment:
Q  175 caatgggtagggtactacagtgcccgtccccataccggcatttataa-aaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtc 269  Q
    |||||||||||||||||||| | | ||||||||| | |||||||||| ||||||||| ||  |||||| ||| | |||||  ||||||||||||||    
T  31511822 caatgggtagggtactacagcgtctgtccccatatccgcatttataaaaaaatacccatactcgtgcccgtatcctcgtggacaacaactttagtc 31511727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 151 - 268
Target Start/End: Complemental strand, 26345 - 26228
Alignment:
Q  151 cacatagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatc 250  Q
    |||||||||||| |||||||||| |||||| |||||||||| ||| ||| |||||||||| || ||| |||||||||||||||||||  || ||||| ||    
T  26345 cacatagggatggcaatgggtacccaatggatagggtactatagtacccatccccatacccgcgtttgtaaaaaatacccgtatccgaacccgtaccctc 26246  T
Q  251 gtgagcaacaactttagt 268  Q
    ||| ||||||||||||||    
T  26245 gtgggcaacaactttagt 26228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 159 - 267
Target Start/End: Complemental strand, 6084 - 5974
Alignment:
Q  159 gatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataa--aaaatacccgtatccgtgcctgtaccatcgtgagc 256  Q
    |||| |||||||||| |||||| |||||||||||| ||||| |||||||  | ||||||||||  |||||||||||| ||||||| ||||| ||||| ||    
T  6084 gatggcaatgggtacccaatggatagggtactacaatgcccttccccatgtccgcatttataaaaaaaatacccgtacccgtgcccgtaccctcgtgggc 5985  T
Q  257 aacaactttag 267  Q
    |||||||||||    
T  5984 aacaactttag 5974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 312
Target Start/End: Complemental strand, 7263 - 7154
Alignment:
Q  203 cccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctcattctgcataccttattgatacctaagtgcc 302  Q
    |||||||| ||||||||||||||||||  || ||||||| ||||| ||||| ||||||||||||||| | |||  |||||| ||  | ||||||||||||    
T  7263 cccatacccgcatttataaaaaatacctatacccgtgcccgtaccctcgtgggcaacaactttagtccccttcctcataccctaagggtacctaagtgcc 7164  T
Q  303 catacctgca 312  Q
    ||||||||||    
T  7163 catacctgca 7154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 312
Target Start/End: Complemental strand, 15144 - 15035
Alignment:
Q  203 cccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagcaacaactttagtctcattctgcataccttattgatacctaagtgcc 302  Q
    |||||||| ||||||||||||||||||  || ||||||| ||||| ||||| ||||||||||||||| | |||  |||||| ||  | ||||||||||||    
T  15144 cccatacccgcatttataaaaaatacctatacccgtgcccgtaccctcgtgggcaacaactttagtccccttcctcataccctaagggtacctaagtgcc 15045  T
Q  303 catacctgca 312  Q
    ||||||||||    
T  15044 catacctgca 15035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 110219 - 110107
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    ||||||||||||| ||||| ||||||||||| |||||||||  || || ||||||| || ||| |||||||| |||||||| ||||| ||| | |||||     
T  110219 tagggatgacaataggtacccaatgggtagg-tactacagtatccatctccatacccgcgtttgtaaaaaatgcccgtatctgtgcccgtatcttcgtgg 110121  T
Q  255 gcaacaactttagt 268  Q
    ||||||||||||||    
T  110120 gcaacaactttagt 110107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 313
Target Start/End: Complemental strand, 13285 - 13129
Alignment:
Q  157 gggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagc 256  Q
    |||||| |||||||||| ||||||| | ||||| | ||| ||| |||||||||| || ||| | ||||||||| ||| ||| ||| ||||| ||||| ||    
T  13285 gggatggcaatgggtacccaatgggcaaggtacaatagtacccatccccatacccgcgtttgtgaaaaatacctgtacccgagcccgtaccctcgtgggc 13186  T
Q  257 aacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcac 313  Q
    ||||||||||||  | |||  |||||| ||| | ||| |||||||||||||| ||||    
T  13185 aacaactttagtgcctttccccataccctatgggtacttaagtgcccatacccgcac 13129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 313
Target Start/End: Complemental strand, 22120 - 21964
Alignment:
Q  157 gggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtgagc 256  Q
    |||||| |||||||||| ||||||| | ||||| | ||| ||| |||||||||| || ||| | ||||||||| ||| ||| ||| ||||| ||||| ||    
T  22120 gggatggcaatgggtacccaatgggcaaggtacaatagtacccatccccatacccgcgtttgtgaaaaatacctgtacccgagcccgtaccctcgtgggc 22021  T
Q  257 aacaactttagtctcattctgcataccttattgatacctaagtgcccatacctgcac 313  Q
    ||||||||||||  | |||  |||||| ||| | ||| |||||||||||||| ||||    
T  22020 aacaactttagtgcctttccccataccctatgggtacttaagtgcccatacccgcac 21964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 266
Target Start/End: Original strand, 26528 - 26639
Alignment:
Q  155 tagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccataccggcatttataaaaaatacccgtatccgtgcctgtaccatcgtga 254  Q
    ||||||||||||||||||| |||||| |||||||||| |||  || |||||||| |  ||||| ||||||||  | ||| ||| ||| ||||| |||||     
T  26528 tagggatgacaatgggtacccaatggatagggtactatagtatccatccccatatcctcatttgtaaaaaatgtctgtacccgagcccgtaccctcgtgg 26627  T
Q  255 gcaacaacttta 266  Q
    ||||||||||||    
T  26628 gcaacaacttta 26639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 72803 - 72747
Alignment:
Q  154 atagggatgacaatgggtactcaatgggtagggtactacagtgcccgtccccatacc 210  Q
    ||||||||| |||||||||| | ||| ||||||||||| ||| ||| ||||||||||    
T  72803 atagggatggcaatgggtaccccatgagtagggtactatagtccccttccccatacc 72747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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