View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6228_low_1 (Length: 552)

Name: NF6228_low_1
Description: NF6228
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6228_low_1
NF6228_low_1
[»] chr5 (46 HSPs)
chr5 (1-57)||(4603782-4603838)
chr5 (4-57)||(13108588-13108641)
chr5 (4-57)||(31288085-31288138)
chr5 (4-57)||(32059579-32059632)
chr5 (1-57)||(23270658-23270714)
chr5 (1-57)||(33709637-33709693)
chr5 (4-57)||(8484800-8484853)
chr5 (4-57)||(22392706-22392759)
chr5 (4-57)||(25586937-25586990)
chr5 (4-57)||(38631100-38631153)
chr5 (1-57)||(25750747-25750803)
chr5 (4-57)||(6014419-6014472)
chr5 (4-57)||(11926641-11926694)
chr5 (4-57)||(13038593-13038646)
chr5 (4-57)||(15641244-15641297)
chr5 (4-57)||(15971261-15971314)
chr5 (13-57)||(3715057-3715101)
chr5 (4-64)||(16616117-16616177)
chr5 (10-57)||(37397718-37397765)
chr5 (15-57)||(12317300-12317342)
chr5 (15-57)||(36954823-36954865)
chr5 (4-57)||(1827669-1827722)
chr5 (11-64)||(11465053-11465106)
chr5 (4-45)||(12398587-12398628)
chr5 (4-57)||(34049827-34049880)
chr5 (4-57)||(34310147-34310200)
chr5 (4-57)||(38684213-38684266)
chr5 (4-56)||(5067307-5067359)
chr5 (4-51)||(37495058-37495105)
chr5 (1-64)||(40330631-40330694)
chr5 (19-57)||(15931064-15931102)
chr5 (15-57)||(19145561-19145603)
chr5 (15-57)||(27498881-27498923)
chr5 (3-57)||(33025485-33025539)
chr5 (13-54)||(7085774-7085815)
chr5 (4-57)||(10869704-10869757)
chr5 (4-45)||(19456348-19456389)
chr5 (16-57)||(30485833-30485874)
chr5 (19-56)||(42193491-42193528)
chr5 (4-48)||(28614623-28614667)
chr5 (13-57)||(42006798-42006842)
chr5 (15-45)||(7151346-7151376)
chr5 (15-57)||(22253295-22253337)
chr5 (4-57)||(27487694-27487747)
chr5 (8-56)||(10399779-10399827)
chr5 (12-64)||(12647738-12647790)
[»] scaffold0576 (1 HSPs)
scaffold0576 (4-57)||(5221-5274)
[»] chr8 (38 HSPs)
chr8 (4-57)||(3734762-3734815)
chr8 (4-57)||(18532116-18532169)
chr8 (4-57)||(19471618-19471671)
chr8 (4-57)||(19542542-19542595)
chr8 (4-57)||(19590101-19590154)
chr8 (4-57)||(20305917-20305970)
chr8 (4-57)||(21092550-21092603)
chr8 (4-57)||(27746474-27746527)
chr8 (4-57)||(28193483-28193536)
chr8 (4-57)||(34237794-34237847)
chr8 (4-56)||(264538-264590)
chr8 (4-56)||(651331-651383)
chr8 (4-56)||(837066-837118)
chr8 (13-57)||(2618195-2618239)
chr8 (16-57)||(4718654-4718695)
chr8 (4-57)||(39349265-39349318)
chr8 (4-57)||(42643257-42643310)
chr8 (8-64)||(21667552-21667608)
chr8 (4-55)||(21603241-21603292)
chr8 (11-57)||(8042663-8042709)
chr8 (15-57)||(26168998-26169040)
chr8 (13-57)||(7558091-7558135)
chr8 (10-50)||(24018398-24018438)
chr8 (13-57)||(42328014-42328057)
chr8 (4-45)||(14632975-14633016)
chr8 (4-57)||(15259545-15259598)
chr8 (1-57)||(41070770-41070826)
chr8 (10-49)||(9047423-9047462)
chr8 (1-64)||(15974908-15974970)
chr8 (4-43)||(20469940-20469979)
chr8 (15-50)||(34639356-34639391)
chr8 (15-57)||(34694726-34694768)
chr8 (16-57)||(4698874-4698915)
chr8 (19-56)||(11714973-11715010)
chr8 (4-57)||(28088295-28088348)
chr8 (4-57)||(32879288-32879341)
chr8 (4-44)||(2166721-2166761)
chr8 (25-65)||(25248365-25248405)
[»] chr7 (45 HSPs)
chr7 (4-57)||(2344308-2344361)
chr7 (4-57)||(2751280-2751333)
chr7 (4-57)||(2103064-2103117)
chr7 (4-57)||(7176001-7176054)
chr7 (4-57)||(7275286-7275339)
chr7 (4-57)||(21217972-21218025)
chr7 (4-57)||(21835160-21835213)
chr7 (4-57)||(22119897-22119950)
chr7 (4-57)||(23854405-23854458)
chr7 (4-57)||(40543049-40543102)
chr7 (13-57)||(18044116-18044160)
chr7 (14-57)||(13332572-13332615)
chr7 (1-52)||(22299863-22299914)
chr7 (15-57)||(27312161-27312203)
chr7 (15-57)||(42913663-42913705)
chr7 (4-57)||(7799971-7800024)
chr7 (4-57)||(10091197-10091250)
chr7 (4-57)||(17212062-17212115)
chr7 (13-57)||(28089825-28089869)
chr7 (1-64)||(9718123-9718186)
chr7 (13-64)||(39145800-39145851)
chr7 (15-57)||(11997858-11997900)
chr7 (15-57)||(31713045-31713087)
chr7 (4-57)||(12211674-12211727)
chr7 (4-49)||(22703503-22703548)
chr7 (4-57)||(25333428-25333481)
chr7 (4-57)||(27009368-27009421)
chr7 (13-50)||(28003852-28003889)
chr7 (1-53)||(17197086-17197138)
chr7 (13-57)||(23012656-23012700)
chr7 (13-57)||(31197600-31197644)
chr7 (13-57)||(32849600-32849644)
chr7 (1-57)||(43785435-43785491)
chr7 (15-49)||(19421248-19421282)
chr7 (16-57)||(8435846-8435887)
chr7 (16-57)||(21370606-21370647)
chr7 (15-56)||(42814874-42814915)
chr7 (4-56)||(40332109-40332161)
chr7 (18-57)||(577688-577727)
chr7 (16-51)||(24686132-24686167)
chr7 (1-44)||(31273936-31273979)
chr7 (15-57)||(9683835-9683877)
chr7 (15-57)||(21574253-21574295)
chr7 (15-57)||(22696329-22696371)
chr7 (24-58)||(28950876-28950910)
[»] chr6 (26 HSPs)
chr6 (4-57)||(12591642-12591695)
chr6 (4-57)||(15360237-15360290)
chr6 (4-57)||(9238980-9239033)
chr6 (4-57)||(11448876-11448929)
chr6 (4-57)||(22576072-22576125)
chr6 (4-50)||(11007177-11007223)
chr6 (4-57)||(13753245-13753298)
chr6 (13-57)||(21982468-21982512)
chr6 (13-57)||(34147351-34147395)
chr6 (13-57)||(34159967-34160011)
chr6 (15-57)||(3222784-3222826)
chr6 (15-57)||(9843943-9843985)
chr6 (15-57)||(33499479-33499521)
chr6 (19-56)||(21148664-21148701)
chr6 (4-55)||(654285-654336)
chr6 (13-64)||(17081202-17081253)
chr6 (15-57)||(8479317-8479359)
chr6 (15-57)||(28672072-28672114)
chr6 (19-56)||(5360225-5360262)
chr6 (4-57)||(33718597-33718650)
chr6 (1-57)||(31039025-31039081)
chr6 (15-50)||(9208264-9208299)
chr6 (4-51)||(14212903-14212950)
chr6 (13-47)||(17706455-17706489)
chr6 (14-57)||(24507557-24507602)
chr6 (15-45)||(28968192-28968222)
[»] chr4 (36 HSPs)
chr4 (4-57)||(25852219-25852272)
chr4 (4-57)||(54127481-54127534)
chr4 (4-57)||(32986202-32986255)
chr4 (4-57)||(33696418-33696471)
chr4 (4-57)||(35229173-35229226)
chr4 (4-57)||(46714397-46714450)
chr4 (4-56)||(19660671-19660723)
chr4 (13-57)||(20566354-20566398)
chr4 (4-64)||(22625209-22625269)
chr4 (4-55)||(1985843-1985894)
chr4 (15-57)||(40059002-40059044)
chr4 (13-55)||(55961890-55961932)
chr4 (4-57)||(13873434-13873487)
chr4 (4-57)||(27528934-27528987)
chr4 (4-57)||(51535618-51535671)
chr4 (4-57)||(52983624-52983677)
chr4 (13-57)||(34722175-34722219)
chr4 (18-57)||(5609355-5609394)
chr4 (1-64)||(13584390-13584453)
chr4 (10-57)||(35674886-35674933)
chr4 (4-45)||(7392102-7392143)
chr4 (4-57)||(34844897-34844950)
chr4 (4-57)||(45787843-45787895)
chr4 (13-57)||(33992631-33992675)
chr4 (5-57)||(42245751-42245803)
chr4 (4-55)||(2351020-2351071)
chr4 (15-57)||(34835534-34835576)
chr4 (15-57)||(41621746-41621788)
chr4 (1-57)||(44343518-44343575)
chr4 (4-44)||(20078123-20078163)
chr4 (13-57)||(32942375-32942419)
chr4 (13-57)||(43719213-43719257)
chr4 (4-48)||(49287872-49287916)
chr4 (21-56)||(10125788-10125823)
chr4 (15-57)||(13550213-13550255)
chr4 (16-48)||(7093390-7093422)
[»] chr3 (49 HSPs)
chr3 (4-57)||(30257629-30257682)
chr3 (4-57)||(25379766-25379819)
chr3 (4-57)||(30807292-30807345)
chr3 (4-57)||(34492714-34492767)
chr3 (4-57)||(35492916-35492969)
chr3 (4-57)||(40133588-40133641)
chr3 (4-57)||(45529893-45529946)
chr3 (4-57)||(46576353-46576406)
chr3 (4-57)||(48977393-48977446)
chr3 (4-57)||(53424315-53424368)
chr3 (4-56)||(26174119-26174171)
chr3 (4-55)||(26108299-26108350)
chr3 (10-57)||(32151429-32151476)
chr3 (4-57)||(7485664-7485717)
chr3 (4-57)||(8456289-8456342)
chr3 (4-57)||(15566638-15566691)
chr3 (4-57)||(21362948-21363001)
chr3 (4-57)||(25289853-25289906)
chr3 (4-57)||(25344196-25344249)
chr3 (4-57)||(31537977-31538030)
chr3 (4-57)||(40940830-40940883)
chr3 (4-57)||(52455788-52455841)
chr3 (13-57)||(45272564-45272608)
chr3 (4-56)||(52821774-52821826)
chr3 (15-57)||(50582997-50583039)
chr3 (4-57)||(7470354-7470407)
chr3 (8-57)||(11390607-11390656)
chr3 (4-57)||(49258401-49258454)
chr3 (13-50)||(53234058-53234095)
chr3 (1-57)||(4252532-4252588)
chr3 (8-48)||(49167070-49167110)
chr3 (4-55)||(9853623-9853674)
chr3 (19-57)||(4462638-4462676)
chr3 (4-57)||(29915408-29915461)
chr3 (4-57)||(29964561-29964614)
chr3 (3-64)||(51390977-51391038)
chr3 (13-57)||(9842926-9842970)
chr3 (13-45)||(10083967-10083999)
chr3 (13-45)||(10190890-10190922)
chr3 (13-57)||(18177035-18177079)
chr3 (13-57)||(19857057-19857100)
chr3 (1-49)||(50195415-50195463)
chr3 (4-56)||(53288851-53288903)
chr3 (6-57)||(25017521-25017571)
chr3 (1-40)||(39041988-39042027)
chr3 (15-57)||(36660775-36660817)
chr3 (16-57)||(55287808-55287849)
chr3 (4-64)||(38732964-38733024)
chr3 (19-63)||(55371439-55371483)
[»] chr2 (38 HSPs)
chr2 (213-297)||(39154035-39154117)
chr2 (4-57)||(18976564-18976617)
chr2 (4-57)||(11941349-11941402)
chr2 (4-57)||(15037964-15038017)
chr2 (4-57)||(33827712-33827765)
chr2 (4-57)||(44946192-44946245)
chr2 (4-57)||(44976293-44976346)
chr2 (4-52)||(27290598-27290646)
chr2 (4-64)||(40997489-40997549)
chr2 (15-57)||(8192501-8192543)
chr2 (11-57)||(32845096-32845142)
chr2 (4-57)||(4852563-4852616)
chr2 (4-49)||(10582129-10582174)
chr2 (4-57)||(17324771-17324824)
chr2 (15-64)||(25293164-25293213)
chr2 (4-55)||(6714420-6714471)
chr2 (10-57)||(27269495-27269542)
chr2 (4-43)||(29361573-29361612)
chr2 (10-57)||(41329848-41329895)
chr2 (15-57)||(4618835-4618877)
chr2 (16-57)||(4567588-4567629)
chr2 (4-45)||(5394034-5394075)
chr2 (4-53)||(19054034-19054083)
chr2 (13-46)||(34516556-34516589)
chr2 (4-49)||(41314005-41314050)
chr2 (13-57)||(24196009-24196053)
chr2 (15-46)||(1845807-1845838)
chr2 (1-48)||(19849847-19849894)
chr2 (15-57)||(918849-918891)
chr2 (15-57)||(19605995-19606037)
chr2 (15-57)||(30466980-30467022)
chr2 (4-57)||(36390707-36390758)
chr2 (4-46)||(44610090-44610132)
chr2 (4-45)||(1191530-1191571)
chr2 (15-56)||(14946785-14946826)
chr2 (16-45)||(43374476-43374505)
chr2 (15-51)||(5861274-5861310)
chr2 (1-45)||(29698164-29698208)
[»] scaffold0623 (1 HSPs)
scaffold0623 (4-57)||(1195-1248)
[»] scaffold0459 (1 HSPs)
scaffold0459 (4-57)||(10832-10885)
[»] scaffold0366 (2 HSPs)
scaffold0366 (4-57)||(9438-9491)
scaffold0366 (4-57)||(12139-12192)
[»] scaffold0217 (1 HSPs)
scaffold0217 (4-57)||(7448-7501)
[»] scaffold0199 (1 HSPs)
scaffold0199 (4-57)||(8546-8599)
[»] scaffold0026 (1 HSPs)
scaffold0026 (4-57)||(97505-97558)
[»] chr1 (41 HSPs)
chr1 (4-57)||(4621376-4621429)
chr1 (4-57)||(7197385-7197438)
chr1 (4-57)||(8077652-8077705)
chr1 (4-57)||(24674398-24674451)
chr1 (4-57)||(34778347-34778400)
chr1 (4-57)||(46607815-46607868)
chr1 (11-64)||(1378896-1378949)
chr1 (4-57)||(7766866-7766919)
chr1 (4-57)||(15059541-15059594)
chr1 (4-57)||(27455005-27455058)
chr1 (4-57)||(29057476-29057529)
chr1 (4-57)||(46113541-46113594)
chr1 (10-57)||(6776149-6776196)
chr1 (13-55)||(14258575-14258617)
chr1 (15-57)||(32729550-32729592)
chr1 (4-57)||(24122028-24122081)
chr1 (4-57)||(30677181-30677234)
chr1 (4-56)||(168207-168259)
chr1 (4-52)||(7578419-7578467)
chr1 (1-49)||(20487326-20487374)
chr1 (11-47)||(37351607-37351643)
chr1 (17-57)||(47091695-47091735)
chr1 (1-56)||(25496624-25496679)
chr1 (1-51)||(7946855-7946905)
chr1 (4-54)||(17935777-17935827)
chr1 (4-57)||(1378750-1378803)
chr1 (16-57)||(2272349-2272390)
chr1 (4-45)||(33905649-33905690)
chr1 (18-57)||(52135135-52135174)
chr1 (15-57)||(809227-809269)
chr1 (15-57)||(1138584-1138626)
chr1 (13-55)||(23232413-23232455)
chr1 (15-57)||(24216983-24217025)
chr1 (24-57)||(1095154-1095187)
chr1 (24-57)||(1486425-1486458)
chr1 (15-52)||(10059065-10059102)
chr1 (4-57)||(18646858-18646911)
chr1 (15-44)||(45859193-45859222)
chr1 (13-57)||(1818739-1818783)
chr1 (4-64)||(21726727-21726787)
chr1 (1-57)||(32930754-32930810)
[»] scaffold0049 (1 HSPs)
scaffold0049 (4-55)||(66769-66820)
[»] scaffold0051 (1 HSPs)
scaffold0051 (13-55)||(53019-53061)
[»] scaffold0328 (1 HSPs)
scaffold0328 (4-57)||(14996-15049)
[»] scaffold0068 (1 HSPs)
scaffold0068 (4-57)||(41783-41836)
[»] scaffold0240 (1 HSPs)
scaffold0240 (4-55)||(12893-12944)
[»] scaffold0717 (1 HSPs)
scaffold0717 (4-57)||(97-150)
[»] scaffold0070 (1 HSPs)
scaffold0070 (16-57)||(40330-40371)
[»] scaffold0460 (1 HSPs)
scaffold0460 (1-49)||(8315-8363)
[»] scaffold0019 (1 HSPs)
scaffold0019 (4-43)||(161828-161867)
[»] scaffold0337 (1 HSPs)
scaffold0337 (14-57)||(1763-1808)
[»] scaffold0200 (1 HSPs)
scaffold0200 (19-57)||(26697-26735)
[»] scaffold0065 (1 HSPs)
scaffold0065 (14-57)||(12199-12244)
[»] scaffold0028 (1 HSPs)
scaffold0028 (15-57)||(27781-27823)


Alignment Details
Target: chr5 (Bit Score: 57; Significance: 2e-23; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 4603838 - 4603782
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4603838 acttgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 4603782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 13108588 - 13108641
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13108588 tgagatctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 13108641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 31288085 - 31288138
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31288085 tgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 31288138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 32059579 - 32059632
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32059579 tgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 32059632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23270658 - 23270714
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23270658 acttgagacctttggatgagcaaactccaagatcccaagccaaccactaggccaacc 23270714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 33709637 - 33709693
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  33709637 acttgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 33709693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 8484800 - 8484853
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  8484800 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 8484853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 22392759 - 22392706
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  22392759 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 22392706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 25586990 - 25586937
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  25586990 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 25586937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 38631100 - 38631153
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  38631100 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 38631153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 25750747 - 25750803
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| || ||||||||||||||||||||||||||| |||||||||||||||||    
T  25750747 acttgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaacc 25750803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 6014419 - 6014472
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||    
T  6014419 tgagatctctggagaagcaaactccaagatcccaagccaatcactaggccaacc 6014472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 11926641 - 11926694
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||| ||||||||||||||||||    
T  11926641 tgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaacc 11926694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 13038593 - 13038646
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||| ||||||||||||||||||    
T  13038593 tgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaacc 13038646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 15641244 - 15641297
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||| ||||    
T  15641244 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggctaacc 15641297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 15971261 - 15971314
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| |||||||    
T  15971261 tgagacctctggaggagcaaactccaagatcccaagccaaccactaagccaacc 15971314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 3715057 - 3715101
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  3715057 tggaggagcaaactccaagatcccaaaccaaccactaggccaacc 3715101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 16616177 - 16616117
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacctgaaatg 64  Q
    |||||||||| |||||||||||||||||||||||||||||| |||| ||||| || |||||    
T  16616177 tgagatctttagaggagcaaactccaagatcccaagccaactactaagccaatctcaaatg 16616117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 37397765 - 37397718
Alignment:
Q  10 ctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  37397765 ctttggaggagcaaactccaagatcacaagccaaccactagaccaacc 37397718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 12317300 - 12317342
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  12317300 gaggagcaaactccaagattccaagccaaccactaggccaacc 12317342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 36954865 - 36954823
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  36954865 gaggagcaaactccaagatcccaaggcaaccactaggccaacc 36954823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 1827669 - 1827722
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||| |||||||||||||||| |||||    
T  1827669 tgagacctctggaggagcaaactccaagatctcaagccaaccactaggtcaacc 1827722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 11465053 - 11465106
Alignment:
Q  11 tttggaggagcaaactccaagatcccaagccaaccactaggccaacctgaaatg 64  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||| ||||||    
T  11465053 tttggaggagcaaactccaagatttcaagccaatcactaggccaacccgaaatg 11465106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 12398587 - 12398628
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaacc 45  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  12398587 tgagacctttggaggagcaaactccaagatcccaagccaacc 12398628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 34049880 - 34049827
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||| ||||| ||||||    
T  34049880 tgagacctctggaggagcaaactccaagatcccaagccaactactagcccaacc 34049827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 34310200 - 34310147
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || ||||||||||||||||||||| ||||||| |||||||||||||||    
T  34310200 tgagacctctggaggagcaaactccaagattccaagccgaccactaggccaacc 34310147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 38684266 - 38684213
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || ||||||||||||||||||||||||||| |||||||| ||||||||    
T  38684266 tgagacctctggaggagcaaactccaagatcccaagtcaaccactgggccaacc 38684213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 5067359 - 5067307
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaac 56  Q
    |||||||| ||||||||||||||| ||||||||||| |||||||||| |||||    
T  5067359 tgagatctctggaggagcaaactcgaagatcccaagtcaaccactagaccaac 5067307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 37495105 - 37495058
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactagg 51  Q
    ||||| || |||||||||||||||||||||| ||||||||||||||||    
T  37495105 tgagacctctggaggagcaaactccaagatctcaagccaaccactagg 37495058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 40330694 - 40330631
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacctgaaatg 64  Q
    |||||||| |||  |||||||||||||||||||| ||||| |||||||| |||||||| |||||    
T  40330694 acttgagaccttgagaggagcaaactccaagatctcaagctaaccactaagccaacctcaaatg 40330631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 15931102 - 15931064
Alignment:
Q  19 agcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  15931102 agcaaactccaagatcccaagctaaccactaggccaacc 15931064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 19145561 - 19145603
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| |||||||||||||||| |||||||||||||||||    
T  19145561 gaggagcatactccaagatcccaagtcaaccactaggccaacc 19145603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 27498881 - 27498923
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||||||||||||||||| ||||||||||||||||| |||||    
T  27498881 gaggagcaaactccaagattccaagccaaccactaggtcaacc 27498923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 33025539 - 33025485
Alignment:
Q  3 ttgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||||||||  |||||||| |||||||||||||||||||||| | |||||||||    
T  33025539 ttgagatcttgagaggagcacactccaagatcccaagccaaccgcgaggccaacc 33025485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 7085774 - 7085815
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggcca 54  Q
    |||||||| |||||||||||||||||||||||||||| ||||    
T  7085774 tggaggagaaaactccaagatcccaagccaaccactaagcca 7085815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 10869704 - 10869757
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| ||||||||||||||||||||||||| |||| ||||||| | |||||||    
T  10869704 tgagacctttggaggagcaaactccaagatcgcaagtcaaccaccatgccaacc 10869757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 19456348 - 19456389
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaacc 45  Q
    ||||| || |||||||||||||||||||||||||||||||||    
T  19456348 tgagacctctggaggagcaaactccaagatcccaagccaacc 19456389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 30485874 - 30485833
Alignment:
Q  16 aggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||||||||||| || ||||||||    
T  30485874 aggagcaaactccaagatcccaagccaaccgctgggccaacc 30485833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 42193528 - 42193491
Alignment:
Q  19 agcaaactccaagatcccaagccaaccactaggccaac 56  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  42193528 agcaaactccaagatcccaagtcaaccactaggccaac 42193491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 28614623 - 28614667
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccact 48  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||    
T  28614623 tgagatctttggaggaacaaactctaagatctcaagccaaccact 28614667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 42006842 - 42006798
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||| ||||||||||||||||| ||||||||||||||| ||||||    
T  42006842 tggatgagcaaactccaagatctcaagccaaccactagcccaacc 42006798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 45
Target Start/End: Complemental strand, 7151376 - 7151346
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaacc 45  Q
    |||||||||||||||||||||||||||||||    
T  7151376 gaggagcaaactccaagatcccaagccaacc 7151346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 22253295 - 22253337
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||| || |||||||||||||||||||||| ||||||    
T  22253295 gaggagcaaagtcaaagatcccaagccaaccactagaccaacc 22253337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 27487694 - 27487747
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||| ||||||||||||| |||||||  |||||||||||||||||    
T  27487694 tgagacctctggaagagcaaactccaaaatcccaaatcaaccactaggccaacc 27487747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 10399827 - 10399779
Alignment:
Q  8 atctttggaggagcaaactccaagatcccaagccaaccactaggccaac 56  Q
    ||||||| || ||||||||||||||||| ||| |||||||||| |||||    
T  10399827 atctttgaagaagcaaactccaagatccaaagtcaaccactagaccaac 10399779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 12647790 - 12647738
Alignment:
Q  12 ttggaggagcaaactccaagatcccaagccaaccactaggccaacctgaaatg 64  Q
    ||||||||| |||||| ||||||| || |||||||||||| |||||| |||||    
T  12647790 ttggaggagtaaactcaaagatcctaaaccaaccactaggtcaacctcaaatg 12647738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 5221 - 5274
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5221 tgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 5274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 3734762 - 3734815
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3734762 tgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 3734815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 18532169 - 18532116
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  18532169 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 18532116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 19471671 - 19471618
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  19471671 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 19471618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 19542595 - 19542542
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  19542595 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 19542542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 19590101 - 19590154
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  19590101 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 19590154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 20305970 - 20305917
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  20305970 tgagacctttggaggagcaaactctaagatcccaagccaaccactaggccaacc 20305917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 21092603 - 21092550
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  21092603 tgagacctttggaggagcaaactctaagatcccaagccaaccactaggccaacc 21092550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 27746474 - 27746527
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27746474 tgagacctttggaggagcaaactccaagatcccaaaccaaccactaggccaacc 27746527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 28193536 - 28193483
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  28193536 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 28193483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 34237794 - 34237847
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  34237794 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 34237847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 264538 - 264590
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaac 56  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  264538 tgagatctctggaggagcaaactcgaagatcccaagccaaccactaggccaac 264590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 651383 - 651331
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaac 56  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  651383 tgagatctctggaggagcaaactcgaagatcccaagccaaccactaggccaac 651331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 837118 - 837066
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaac 56  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  837118 tgagatctctggaggagcaaactcgaagatcccaagccaaccactaggccaac 837066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 2618239 - 2618195
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  2618239 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 2618195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 4718695 - 4718654
Alignment:
Q  16 aggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4718695 aggagcaaactccaagatcccaagccaaccactaggccaacc 4718654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 39349318 - 39349265
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||| ||||||||    
T  39349318 tgagacctctggaggagcaaactccaagatcccaagccaaccactgggccaacc 39349265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 42643257 - 42643310
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || ||||||||||||||||||||||||||| |||||||||||||||||    
T  42643257 tgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaacc 42643310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 21667608 - 21667552
Alignment:
Q  8 atctttggaggagcaaactccaagatcccaagccaaccactaggccaacctgaaatg 64  Q
    |||||||||||||||| ||||||||| |||||||||||||||| ||||||| |||||    
T  21667608 atctttggaggagcaacctccaagattccaagccaaccactagaccaacctcaaatg 21667552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 21603292 - 21603241
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaa 55  Q
    ||||| || ||||||||||||||| |||||||||||||||||||||||||||    
T  21603292 tgagacctctggaggagcaaactctaagatcccaagccaaccactaggccaa 21603241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 8042709 - 8042663
Alignment:
Q  11 tttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||    
T  8042709 tttggaggagcaaactccaagatcccaagccaagcactaggtcaacc 8042663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 26168998 - 26169040
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  26168998 gaggagcaaactccaagatcccaagcaaaccactaggccaacc 26169040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 7558091 - 7558135
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  7558091 tggaggagcaaactccaagatcccaagctaactactaggccaacc 7558135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 24018438 - 24018398
Alignment:
Q  10 ctttggaggagcaaactccaagatcccaagccaaccactag 50  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  24018438 ctttggaggagcaaactccaagatcccaagtcaaccactag 24018398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 42328057 - 42328014
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  42328057 tggaggag-aaactccaagatcccaagccaaccactaggccaacc 42328014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 14633016 - 14632975
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaacc 45  Q
    ||||| || |||||||||||||||||||||||||||||||||    
T  14633016 tgagacctctggaggagcaaactccaagatcccaagccaacc 14632975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 15259545 - 15259598
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||| ||||||||||||| ||||||||||| ||||||    
T  15259545 tgagacctctggaggagcaaaatccaagatcccaaaccaaccactagaccaacc 15259598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 41070826 - 41070770
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| |||  ||| |||| |||||||||||||||| |||||||||||||||||    
T  41070826 acttgagaccttgagagtagcacactccaagatcccaagtcaaccactaggccaacc 41070770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 9047423 - 9047462
Alignment:
Q  10 ctttggaggagcaaactccaagatcccaagccaaccacta 49  Q
    ||||||||||||||||||||||||| ||| ||||||||||    
T  9047423 ctttggaggagcaaactccaagatctcaaaccaaccacta 9047462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 15974970 - 15974908
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacctgaaatg 64  Q
    |||||||| |||  |||||||| ||||||||||||||||  ||||||||||||||||| |||||    
T  15974970 acttgagaccttgagaggagcatactccaagatcccaag-taaccactaggccaaccttaaatg 15974908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 20469979 - 20469940
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaa 43  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  20469979 tgagacctctggaggagcaaactccaagatcccaagccaa 20469940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 34639356 - 34639391
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactag 50  Q
    |||||||| |||||||||||||||||||||||||||    
T  34639356 gaggagcacactccaagatcccaagccaaccactag 34639391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 34694726 - 34694768
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||| |||| |||||||||| ||||||    
T  34694726 gaggagcaaactccaagatcacaagtcaaccactagaccaacc 34694768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 4698874 - 4698915
Alignment:
Q  16 aggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||||||||||||||||||||| |||||| || ||||||||    
T  4698874 aggagcaaactccaagatcccaaaccaaccgctgggccaacc 4698915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 11714973 - 11715010
Alignment:
Q  19 agcaaactccaagatcccaagccaaccactaggccaac 56  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  11714973 agcaaactccaagatctcaaaccaaccactaggccaac 11715010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 28088348 - 28088295
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||| || ||||||||||||||||||| ||||||||| |||||||    
T  28088348 tgagacctctggatgaacaaactccaagatcccaagtcaaccactaagccaacc 28088295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 32879341 - 32879288
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || ||||||| ||||||| ||||||||||| |||||||||| ||||||    
T  32879341 tgagacctctggaggaccaaactcgaagatcccaagtcaaccactagaccaacc 32879288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 2166761 - 2166721
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaac 44  Q
    ||||| |||||||| |||||||||||||||||||| |||||    
T  2166761 tgagacctttggagaagcaaactccaagatcccaaaccaac 2166721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 25248405 - 25248365
Alignment:
Q  25 ctccaagatcccaagccaaccactaggccaacctgaaatga 65  Q
    ||||||||||||||||||||||||||  |||||| ||||||    
T  25248405 ctccaagatcccaagccaaccactagatcaacctcaaatga 25248365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 2344361 - 2344308
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2344361 tgagagctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 2344308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 2751333 - 2751280
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2751333 tgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 2751280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 2103117 - 2103064
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  2103117 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 2103064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 7176001 - 7176054
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  7176001 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 7176054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 7275339 - 7275286
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  7275339 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 7275286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 21217972 - 21218025
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  21217972 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 21218025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 21835213 - 21835160
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  21835213 tgagatctctggaggagcaaactccaagatcccaagccaaccactaggtcaacc 21835160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 22119950 - 22119897
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  22119950 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 22119897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 23854458 - 23854405
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  23854458 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 23854405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 40543049 - 40543102
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  40543049 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 40543102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 18044160 - 18044116
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  18044160 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 18044116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 13332572 - 13332615
Alignment:
Q  14 ggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  13332572 ggaggagcaaactccaagatcccaagccaaccactaggccaacc 13332615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 22299914 - 22299863
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagccaaccactaggc 52  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  22299914 acttgagacctctggaggagcaaactccaagatcccaagccaaccactaggc 22299863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 27312203 - 27312161
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27312203 gaggagcaaactccaagatcccaagccaaccactaggccaacc 27312161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 42913663 - 42913705
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  42913663 gaggagcaaactccaagatcccaagccaaccactaggccaacc 42913705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 7799971 - 7800024
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||| |||||    
T  7799971 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggtcaacc 7800024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 10091250 - 10091197
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||| ||||||    
T  10091250 tgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaacc 10091197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 17212115 - 17212062
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| |||||||    
T  17212115 tgagacctctggaggagcaaactccaagatcccaagccaaccactaagccaacc 17212062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 28089869 - 28089825
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  28089869 tggaggagcaaactccaagatctcaagccaaccactaggccaacc 28089825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9718123 - 9718186
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacctgaaatg 64  Q
    ||||||||  |||||||||||||||||||| ||| || |||||||||||||||||||| |||||    
T  9718123 acttgagacttttggaggagcaaactccaatatctcaggccaaccactaggccaacctcaaatg 9718186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 39145800 - 39145851
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacctgaaatg 64  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||| |||||    
T  39145800 tggaggagcaaactccaagatcccaagtcaaccactaggtcaacctcaaatg 39145851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 11997900 - 11997858
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  11997900 gaggagcaaactccaagatcccaagccaaccactagcccaacc 11997858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 31713045 - 31713087
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  31713045 gaggagcaaactccaagatcccaaaccaaccactaggccaacc 31713087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 12211674 - 12211727
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||  |||||||| |||||||||||| |||||||||||||||||||||    
T  12211674 tgagatcttgagaggagcacactccaagatcctaagccaaccactaggccaacc 12211727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 22703548 - 22703503
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccacta 49  Q
    ||||| || |||||||||||||||||||||||||||||||||||||    
T  22703548 tgagacctctggaggagcaaactccaagatcccaagccaaccacta 22703503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 25333481 - 25333428
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || ||||| ||||||||||||||||||||||||||||||| |||||||    
T  25333481 tgagacctctggagaagcaaactccaagatcccaagccaaccactaagccaacc 25333428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 27009421 - 27009368
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||| |||||||||||||||||| |||||||||||||||||||||    
T  27009421 tgagacctctggatgagcaaactccaagatccgaagccaaccactaggccaacc 27009368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 28003889 - 28003852
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactag 50  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28003889 tggaggagcaaactccaagatcccaagccaaccactag 28003852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17197086 - 17197138
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagccaaccactaggcc 53  Q
    |||||||| || |||||||||||||||||||||| ||| ||||||||||||||    
T  17197086 acttgagacctatggaggagcaaactccaagatcgcaaaccaaccactaggcc 17197138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 23012656 - 23012700
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||    
T  23012656 tggagaagcaaactccaagatcccaagccaaccactgggccaacc 23012700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 31197644 - 31197600
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||    
T  31197644 tggatgagcaaactccaagatcccaagccaaccactagaccaacc 31197600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 32849644 - 32849600
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||    
T  32849644 tggaggagcaaactccaagatcccaagtcaaccactaggctaacc 32849600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 43785435 - 43785491
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| |||||||||||||| ||| |||||||||||||||||| |||| |||||    
T  43785435 acttgagacctttggaggagcaatctcaaagatcccaagccaaccattaggtcaacc 43785491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 19421282 - 19421248
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccacta 49  Q
    |||||||||||||||||||||||||||||||||||    
T  19421282 gaggagcaaactccaagatcccaagccaaccacta 19421248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 8435846 - 8435887
Alignment:
Q  16 aggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  8435846 aggagcaaactccaagatcccaagtcaaccactagaccaacc 8435887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 21370647 - 21370606
Alignment:
Q  16 aggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| ||||||||||||||||| ||||||||||||||||||    
T  21370647 aggagtaaactccaagatcccaaaccaaccactaggccaacc 21370606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 42814915 - 42814874
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaac 56  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  42814915 gaggagcaaactccaagatcccaagtcaaccactaagccaac 42814874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 40332161 - 40332109
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaac 56  Q
    ||||| |||| |||||||||||||||||||  ||||||||||||||| |||||    
T  40332161 tgagacctttagaggagcaaactccaagatttcaagccaaccactagaccaac 40332109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 577727 - 577688
Alignment:
Q  18 gagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  577727 gagcaaactctaagatcccaagcaaaccactaggccaacc 577688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 24686132 - 24686167
Alignment:
Q  16 aggagcaaactccaagatcccaagccaaccactagg 51  Q
    |||||||||||||||||||||||| |||||||||||    
T  24686132 aggagcaaactccaagatcccaagtcaaccactagg 24686167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31273979 - 31273936
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagccaac 44  Q
    |||||||| || ||||||||||||||||||||||||||| ||||    
T  31273979 acttgagagctctggaggagcaaactccaagatcccaagtcaac 31273936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 9683877 - 9683835
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||| ||||| |||| |||||||||||||||||    
T  9683877 gaggagcaaactcccagatctcaagtcaaccactaggccaacc 9683835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 21574253 - 21574295
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||    
T  21574253 gaggagcacactccaaaatcccaaaccaaccactaggccaacc 21574295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 22696371 - 22696329
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| |||||||||||||||  |||||||||||||||||    
T  22696371 gaggagcacactccaagatcccaaatcaaccactaggccaacc 22696329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 58
Target Start/End: Complemental strand, 28950910 - 28950876
Alignment:
Q  24 actccaagatcccaagccaaccactaggccaacct 58  Q
    ||||||||| |||||||||||||||||||||||||    
T  28950910 actccaagaccccaagccaaccactaggccaacct 28950876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 12591695 - 12591642
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12591695 tgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 12591642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 15360237 - 15360290
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15360237 tgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 15360290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 9239033 - 9238980
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  9239033 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 9238980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 11448929 - 11448876
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  11448929 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 11448876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 22576125 - 22576072
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  22576125 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 22576072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 11007223 - 11007177
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactag 50  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  11007223 tgagacctttggaggagcaaactccaagatcccaagccaaccactag 11007177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 13753298 - 13753245
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || ||||||||||||||||||||||| |||||||||||||||||||||    
T  13753298 tgagacctctggaggagcaaactccaagatccaaagccaaccactaggccaacc 13753245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 21982468 - 21982512
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  21982468 tggaggagcaaacttcaagatcccaagccaaccactaggccaacc 21982512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 34147395 - 34147351
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  34147395 tggaagagcaaactccaagatcccaagccaaccactaggccaacc 34147351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 34160011 - 34159967
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  34160011 tggaagagcaaactccaagatcccaagccaaccactaggccaacc 34159967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 3222784 - 3222826
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  3222784 gaggagcaaactgcaagatcccaagccaaccactaggccaacc 3222826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 9843985 - 9843943
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  9843985 gaggagcaaactccaagatcccaagccaaccactagaccaacc 9843943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 33499521 - 33499479
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  33499521 gaggagcaaactccaagatcccaagccaaccaccaggccaacc 33499479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 21148664 - 21148701
Alignment:
Q  19 agcaaactccaagatcccaagccaaccactaggccaac 56  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21148664 agcaaactccaagatcccaagccaaccactaggccaac 21148701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 654285 - 654336
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaa 55  Q
    ||||| || ||||||||||||||||||||||||||| || ||||||||||||    
T  654285 tgagacctctggaggagcaaactccaagatcccaagtcagccactaggccaa 654336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 17081202 - 17081253
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacctgaaatg 64  Q
    ||||||||||||||||||||||| |||||||||||||| | ||||| |||||    
T  17081202 tggaggagcaaactccaagatcctaagccaaccactagactaacctcaaatg 17081253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 8479359 - 8479317
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| |||||||||||||||| |||||||||||||||||    
T  8479359 gaggagcacactccaagatcccaagtcaaccactaggccaacc 8479317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 28672114 - 28672072
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||| |||| |||||||||||||||||    
T  28672114 gaggagcaaactccaagatctcaagtcaaccactaggccaacc 28672072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 5360225 - 5360262
Alignment:
Q  19 agcaaactccaagatcccaagccaaccactaggccaac 56  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  5360225 agcaaactccaagatcccaagccaaccaccaggccaac 5360262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 33718597 - 33718650
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| ||||| || ||||||||||||||||| ||||||||||| ||||||    
T  33718597 tgagatctctggagaagtaaactccaagatcccaaaccaaccactagaccaacc 33718650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 31039081 - 31039025
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||||||||||||| ||||||||||||||||| | |||||||| ||| || |||||    
T  31039081 acttgagatctttggtggagcaaactccaagattcaaagccaactactgggtcaacc 31039025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 9208299 - 9208264
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactag 50  Q
    |||||||||||||||||||||||| |||||||||||    
T  9208299 gaggagcaaactccaagatcccaatccaaccactag 9208264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 14212950 - 14212903
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactagg 51  Q
    ||||| || |||||||||||||||||||||||| ||||||||| ||||    
T  14212950 tgagacctctggaggagcaaactccaagatcccgagccaaccattagg 14212903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 17706455 - 17706489
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccac 47  Q
    ||||||||||||||||||||||||||| |||||||    
T  17706455 tggaggagcaaactccaagatcccaagtcaaccac 17706489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 24507557 - 24507602
Alignment:
Q  14 ggaggagcaaactccaagatcccaagcca--accactaggccaacc 57  Q
    |||||||||||||||||| ||||||||||  |||||||||||||||    
T  24507557 ggaggagcaaactccaaggtcccaagccaacaccactaggccaacc 24507602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 45
Target Start/End: Original strand, 28968192 - 28968222
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaacc 45  Q
    |||||||||||||||||||||||||||||||    
T  28968192 gaggagcaaactccaagatcccaagccaacc 28968222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 25852272 - 25852219
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25852272 tgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 25852219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 54127481 - 54127534
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  54127481 tgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 54127534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 32986255 - 32986202
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  32986255 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 32986202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 33696418 - 33696471
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  33696418 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 33696471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 35229226 - 35229173
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  35229226 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 35229173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 46714450 - 46714397
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  46714450 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 46714397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 19660671 - 19660723
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaac 56  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  19660671 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaac 19660723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 20566398 - 20566354
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  20566398 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 20566354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 22625209 - 22625269
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacctgaaatg 64  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  22625209 tgagacctctggaggagtaaactccaagatcccaagccaaccactaggccaacctcaaatg 22625269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 1985894 - 1985843
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaa 55  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  1985894 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 1985843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 40059002 - 40059044
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  40059002 gaggagcaaactccaagatcccaagccaaccactaggccaacc 40059044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 55961890 - 55961932
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaa 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  55961890 tggaggagcaaactccaagatcccaagccaaccactaggccaa 55961932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 13873434 - 13873487
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  13873434 tgagacctttgaaggagcaaactccaagatcccaagcaaaccactaggccaacc 13873487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 27528934 - 27528987
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| |||||||    
T  27528934 tgagacctctggaggagcaaactccaagatcccaagccaaccactaagccaacc 27528987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 51535671 - 51535618
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || ||||||||||||||||||||||||||| |||||||||||||||||    
T  51535671 tgagacctgtggaggagcaaactccaagatcccaagtcaaccactaggccaacc 51535618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 52983677 - 52983624
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||| ||||||||||||||||||||||    
T  52983677 tgagacctctggaggagcaaactccaagatctcaagccaaccactaggccaacc 52983624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 34722219 - 34722175
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  34722219 tggaggagcaaactccaagatcccaagccaaccactaagccaacc 34722175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 5609355 - 5609394
Alignment:
Q  18 gagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5609355 gagcaaactccaagatcccaagccaaccactaggccaacc 5609394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 13584390 - 13584453
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacctgaaatg 64  Q
    ||||||||  |||||||||||||||||||| ||| || |||||||||||||||||||| |||||    
T  13584390 acttgagacttttggaggagcaaactccaatatctcaggccaaccactaggccaacctcaaatg 13584453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 35674886 - 35674933
Alignment:
Q  10 ctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  35674886 ctttggaagagcaaactccaagatcccaagccaaccacttggccaacc 35674933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 7392102 - 7392143
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaacc 45  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  7392102 tgagacctttggaggagcaaactccaagatcccaagccaacc 7392143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 34844897 - 34844950
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||| ||||| ||||||||||||||||    
T  34844897 tgagacctctggaggagcaaactccaagatctcaagcaaaccactaggccaacc 34844950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 45787843 - 45787895
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| |||||||||||| |||||||| |||||||||||||||||||||||    
T  45787843 tgagatctctggaggagcaaa-tccaagattccaagccaaccactaggccaacc 45787895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 33992675 - 33992631
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||||||| |||||||||||| |||||    
T  33992675 tggaggagcaaactccaagatcccaaaccaaccactaggtcaacc 33992631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 42245803 - 42245751
Alignment:
Q  5 gagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||| |||| ||||||||||||| ||||||||||| |||||||||||||||||    
T  42245803 gagacctttagaggagcaaactctaagatcccaagtcaaccactaggccaacc 42245751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 2351071 - 2351020
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaa 55  Q
    ||||| || |||||||||||||| |||||| |||||||||||||||||||||    
T  2351071 tgagacctctggaggagcaaacttcaagattccaagccaaccactaggccaa 2351020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 34835576 - 34835534
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||||||||||| |||||||||||||||||||||| ||||||    
T  34835576 gaggagcaaactctaagatcccaagccaaccactagaccaacc 34835534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 41621746 - 41621788
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||| ||||||||||| ||||||||||    
T  41621746 gaggagcaaactccaagatctcaagccaaccattaggccaacc 41621788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 44343575 - 44343518
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagcc-aaccactaggccaacc 57  Q
    |||||||  |||||| ||||||||||||||||||||||||| ||||||||| ||||||    
T  44343575 acttgagtcctttgggggagcaaactccaagatcccaagccaaaccactagcccaacc 44343518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 20078123 - 20078163
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaac 44  Q
    ||||| || ||||||||||||||||||||||||||||||||    
T  20078123 tgagacctctggaggagcaaactccaagatcccaagccaac 20078163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 32942419 - 32942375
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| ||||||||||||| ||||||||||||||| ||||||    
T  32942419 tggaggagtaaactccaagatctcaagccaaccactagaccaacc 32942375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 43719213 - 43719257
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||| ||| ||||||||||| ||||||    
T  43719213 tggaggagcaaactccaagatctcaaaccaaccactagaccaacc 43719257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 49287916 - 49287872
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccact 48  Q
    ||||| || |||||||||||||||||||||||||| |||||||||    
T  49287916 tgagacctctggaggagcaaactccaagatcccaaaccaaccact 49287872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 10125823 - 10125788
Alignment:
Q  21 caaactccaagatcccaagccaaccactaggccaac 56  Q
    ||||||||||||||||||| ||||||||||||||||    
T  10125823 caaactccaagatcccaagtcaaccactaggccaac 10125788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 13550255 - 13550213
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||| ||||| |||| |||||||||||||||||    
T  13550255 gaggagcaaactcccagatctcaagtcaaccactaggccaacc 13550213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 7093422 - 7093390
Alignment:
Q  16 aggagcaaactccaagatcccaagccaaccact 48  Q
    ||||||| |||||||||||||||||||||||||    
T  7093422 aggagcacactccaagatcccaagccaaccact 7093390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 30257682 - 30257629
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30257682 tgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 30257629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 25379819 - 25379766
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  25379819 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 25379766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 30807292 - 30807345
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  30807292 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 30807345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 34492714 - 34492767
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  34492714 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 34492767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 35492969 - 35492916
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  35492969 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 35492916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 40133588 - 40133641
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  40133588 tgagacctttggaggagcaaactccaaaatcccaagccaaccactaggccaacc 40133641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 45529893 - 45529946
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  45529893 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 45529946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 46576406 - 46576353
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  46576406 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 46576353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 48977446 - 48977393
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  48977446 tgagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaacc 48977393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 53424315 - 53424368
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  53424315 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 53424368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 26174171 - 26174119
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaac 56  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  26174171 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaac 26174119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 26108350 - 26108299
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaa 55  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  26108350 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 26108299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 32151476 - 32151429
Alignment:
Q  10 ctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  32151476 ctttggaggagcaaactccaagatcccaagtcaaccactaggccaacc 32151429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 7485664 - 7485717
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||| |||||||    
T  7485664 tgagacctttggaggagcaaactccaagatcccaagtcaaccactatgccaacc 7485717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 8456289 - 8456342
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || ||||||||||||||| |||||||||||||||||||||||||||||    
T  8456289 tgagacctctggaggagcaaactcgaagatcccaagccaaccactaggccaacc 8456342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 15566638 - 15566691
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||| ||||||||||||||||||||||    
T  15566638 tgagacctctggaggagcaaactccaagatctcaagccaaccactaggccaacc 15566691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 21363001 - 21362948
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || ||||||||||||||||||||||||||| |||||||||||||||||    
T  21363001 tgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaacc 21362948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 25289853 - 25289906
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||| ||||||    
T  25289853 tgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaacc 25289906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 25344196 - 25344249
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  25344196 tgagatctctggaggagcaaactcgaagatcccaagtcaaccactaggccaacc 25344249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 31537977 - 31538030
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || ||||||||||||||||||||||| |||||||||||||||||||||    
T  31537977 tgagacctctggaggagcaaactccaagatcctaagccaaccactaggccaacc 31538030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 40940883 - 40940830
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||| ||||||    
T  40940883 tgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaacc 40940830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 52455788 - 52455841
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||| ||||||||||||||||||||    
T  52455788 tgagacctctggaggagcaaactccaagatccctagccaaccactaggccaacc 52455841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 45272564 - 45272608
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  45272564 tggaggagcaaactccaagatcccaagccaacgactaggccaacc 45272608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 52821774 - 52821826
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaac 56  Q
    ||||| || ||||||||||||||||||||||||||| ||||||||||||||||    
T  52821774 tgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaac 52821826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 50583039 - 50582997
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  50583039 gaggagcaaactccaagatcccaaaccaaccactaggccaacc 50582997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 7470354 - 7470407
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| ||||||||||||||||||||||||| |||| |||||||||||| ||||    
T  7470354 tgagacctttggaggagcaaactccaagatctcaagtcaaccactaggcaaacc 7470407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 11390656 - 11390607
Alignment:
Q  8 atctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  11390656 atctttggaggagaaaactccaagatctcaaaccaaccactaggccaacc 11390607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 49258401 - 49258454
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||| ||||||||||||||||||||||||| ||||    
T  49258401 tgagacctctggaggagcaaactgcaagatcccaagccaaccactaggcaaacc 49258454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 53234058 - 53234095
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactag 50  Q
    ||||||||||||||||||||||||||||||||||||||    
T  53234058 tggaggagcaaactccaagatcccaagccaaccactag 53234095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 4252532 - 4252588
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| |||  |||||||| ||||||||||| ||||||||||||||||||||||    
T  4252532 acttgagaccttgagaggagcacactccaagatctcaagccaaccactaggccaacc 4252588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 49167110 - 49167070
Alignment:
Q  8 atctttggaggagcaaactccaagatcccaagccaaccact 48  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  49167110 atctttggaggagcaaactccaagatctcaagccaaccact 49167070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 9853674 - 9853623
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaa 55  Q
    ||||| ||||||||||||||||||||||||||||| | ||||||||| ||||    
T  9853674 tgagacctttggaggagcaaactccaagatcccaaactaaccactagaccaa 9853623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 4462676 - 4462638
Alignment:
Q  19 agcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  4462676 agcaaactccaagatctcaagccaaccactaggccaacc 4462638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 29915408 - 29915461
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || ||||||||||||||||||||||||||| |||||| |||| |||||    
T  29915408 tgagacctctggaggagcaaactccaagatcccaagtcaaccattaggtcaacc 29915461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 29964561 - 29964614
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || ||||||||||||||||||||||||||| |||||| |||| |||||    
T  29964561 tgagacctctggaggagcaaactccaagatcccaagtcaaccattaggtcaacc 29964614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 51390977 - 51391038
Alignment:
Q  3 ttgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacctgaaatg 64  Q
    ||||||||||  ||||||||||||| |||||| |||||||||||||||| || ||| |||||    
T  51390977 ttgagatcttgagaggagcaaactctaagatctcaagccaaccactaggacagcctcaaatg 51391038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 9842970 - 9842926
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| ||||||||||||||||| ||||||||||| ||||||    
T  9842970 tggaggagaaaactccaagatcccaaaccaaccactagaccaacc 9842926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 10083967 - 10083999
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaacc 45  Q
    |||||||||||||||||||||||||||||||||    
T  10083967 tggaggagcaaactccaagatcccaagccaacc 10083999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 10190890 - 10190922
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaacc 45  Q
    |||||||||||||||||||||||||||||||||    
T  10190890 tggaggagcaaactccaagatcccaagccaacc 10190922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 18177035 - 18177079
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||| ||||||||||||||||| |||| |||||||||||||||||    
T  18177035 tggaagagcaaactccaagatctcaagtcaaccactaggccaacc 18177079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 19857100 - 19857057
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  19857100 tggaggagcaaactccaagat-ccaagccaaccaccaggccaacc 19857057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 50195415 - 50195463
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagccaaccacta 49  Q
    ||||||||||||  ||| ||||||||||||||||||||| |||||||||    
T  50195415 acttgagatcttgagagaagcaaactccaagatcccaagacaaccacta 50195463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 53288851 - 53288903
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaac 56  Q
    ||||| |||||||||||||||||| || ||||||| ||||||||| |||||||    
T  53288851 tgagacctttggaggagcaaactctaatatcccaaaccaaccacttggccaac 53288903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 25017571 - 25017521
Alignment:
Q  6 agatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||||||||| ||||||||||  || ||||||||    
T  25017571 agatctttggaggagcaaactccaagat-ccaagccaacatctgggccaacc 25017521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 39041988 - 39042027
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagc 40  Q
    |||||||| || ||||||||||||||||||||||||||||    
T  39041988 acttgagacctctggaggagcaaactccaagatcccaagc 39042027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 36660817 - 36660775
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||||||||||||||||||| || |||||||||||| |||||    
T  36660817 gaggagcaaactccaagatcctaaaccaaccactaggtcaacc 36660775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 55287849 - 55287808
Alignment:
Q  16 aggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||| ||||| ||||||||||||||| |||||||    
T  55287849 aggagcaaactctaagattccaagccaaccactatgccaacc 55287808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 38733024 - 38732964
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacctgaaatg 64  Q
    ||||| || ||||||| ||||||||||||| ||||| |||||| ||| ||||||| |||||    
T  38733024 tgagacctctggaggaacaaactccaagattccaagtcaaccattagcccaacctcaaatg 38732964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 55371439 - 55371483
Alignment:
Q  19 agcaaactccaagatcccaagccaaccactaggccaacctgaaat 63  Q
    |||| ||||||| ||| ||||||||||||||||||||||| ||||    
T  55371439 agcatactccaaaatcgcaagccaaccactaggccaacctcaaat 55371483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 297
Target Start/End: Original strand, 39154035 - 39154117
Alignment:
Q  213 ttgctagtctctgtaaaaagtaaaataaatgggtaggaaatgaatccttttaagaaataggaccaatcttgtttaaatttgctaa 297  Q
    ||||||||||||| ||||||||||| ||||||||  |||||||||| |||||||||||| ||| | |||||||||||||||||||    
T  39154035 ttgctagtctctggaaaaagtaaaagaaatgggt--gaaatgaatcattttaagaaataagacaactcttgtttaaatttgctaa 39154117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 18976564 - 18976617
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  18976564 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 18976617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 11941349 - 11941402
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||| ||||||    
T  11941349 tgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaacc 11941402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 15038017 - 15037964
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| ||||||||||||||||||||||||||| || |||||||||||||||||    
T  15038017 tgagacctttggaggagcaaactccaagatcccgagtcaaccactaggccaacc 15037964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 33827712 - 33827765
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || ||||||||||| |||||||||||||||||||||||||||||||||    
T  33827712 tgagacctctggaggagcaatctccaagatcccaagccaaccactaggccaacc 33827765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 44946192 - 44946245
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||| ||||||    
T  44946192 tgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaacc 44946245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 44976293 - 44976346
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || ||||||||||||| |||||||||||||||||||||||||||||||    
T  44976293 tgagacctctggaggagcaaaccccaagatcccaagccaaccactaggccaacc 44976346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 27290646 - 27290598
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggc 52  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||    
T  27290646 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggc 27290598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 40997489 - 40997549
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacctgaaatg 64  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||| || |||| |||||    
T  40997489 tgagacctttggaggagcaaactccaagatcccaagtcaaccactagacccacctcaaatg 40997549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 8192501 - 8192543
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  8192501 gaggagcacactccaagatcccaagccaaccactaggccaacc 8192543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 32845142 - 32845096
Alignment:
Q  11 tttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||    
T  32845142 tttggaggagcaaactccaagatcccaagctaactactaggccaacc 32845096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 4852616 - 4852563
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||||||| |||||    
T  4852616 tgagacctttggaggagcaaactccaagattccaagtcaaccactaggtcaacc 4852563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 10582129 - 10582174
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccacta 49  Q
    ||||| || |||||||||||||||||||||||||||||||||||||    
T  10582129 tgagacctctggaggagcaaactccaagatcccaagccaaccacta 10582174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 17324824 - 17324771
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || ||||||||||||||||||||| |||| ||||||||||||||||||    
T  17324824 tgagacctctggaggagcaaactccaagataccaaaccaaccactaggccaacc 17324771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 25293213 - 25293164
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacctgaaatg 64  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| |||||    
T  25293213 gaggagcaaactccaagatcccaagtcaaccactagaccaacctcaaatg 25293164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 6714420 - 6714471
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaa 55  Q
    ||||| || |||||||||||||||||||||| ||||||||||| ||||||||    
T  6714420 tgagacctctggaggagcaaactccaagatctcaagccaaccattaggccaa 6714471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 27269495 - 27269542
Alignment:
Q  10 ctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||| ||||||||||||| ||||||||||||||||||||| |||||||    
T  27269495 ctttagaggagcaaactcgaagatcccaagccaaccactatgccaacc 27269542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 29361612 - 29361573
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaa 43  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  29361612 tgagatctttggaggagcaaactccaagatcccaatccaa 29361573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 41329895 - 41329848
Alignment:
Q  10 ctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||| |||||||||| | ||||||||||||||||    
T  41329895 ctttggaggagcaaactctaagatcccaaactaaccactaggccaacc 41329848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 4618835 - 4618877
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| |||||||||| |||||||||||||||||||||||    
T  4618835 gaggagcatactccaagattccaagccaaccactaggccaacc 4618877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 4567588 - 4567629
Alignment:
Q  16 aggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||||||||| ||||||||||||||||| ||||||||||||    
T  4567588 aggagcaaacttcaagatcccaagccaactactaggccaacc 4567629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 5394075 - 5394034
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaacc 45  Q
    ||||| ||||||||||||||||||||||||| ||||||||||    
T  5394075 tgagacctttggaggagcaaactccaagatctcaagccaacc 5394034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 19054083 - 19054034
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggcc 53  Q
    ||||| ||||||||||||| ||||||||||| |||||||| |||||||||    
T  19054083 tgagacctttggaggagcagactccaagatctcaagccaatcactaggcc 19054034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 34516556 - 34516589
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaacca 46  Q
    ||||||||||||||||||||||||||||||||||    
T  34516556 tggaggagcaaactccaagatcccaagccaacca 34516589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 41314050 - 41314005
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccacta 49  Q
    ||||| || |||||||||||||||||||||||||| ||||||||||    
T  41314050 tgagacctctggaggagcaaactccaagatcccaaaccaaccacta 41314005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 24196053 - 24196009
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||||||| ||| |||| ||||||||||||||||||||||||||    
T  24196053 tggaggagcgaaccccaaaatcccaagccaaccactaggccaacc 24196009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 46
Target Start/End: Original strand, 1845807 - 1845838
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaacca 46  Q
    ||||||||||||||||||||||||||||||||    
T  1845807 gaggagcaaactccaagatcccaagccaacca 1845838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 19849894 - 19849847
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagccaaccact 48  Q
    |||| ||| ||||||||||||||||||||||||| ||| |||||||||    
T  19849894 acttaagacctttggaggagcaaactccaagatctcaaaccaaccact 19849847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 918849 - 918891
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||| ||| |||||||||||||||||||| |||||    
T  918849 gaggagcaaacttcaaaatcccaagccaaccactaggtcaacc 918891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 19605995 - 19606037
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||  |||||||||||||||||||||||||||| |||||    
T  19605995 gaggagcgcactccaagatcccaagccaaccactagggcaacc 19606037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 30466980 - 30467022
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||    
T  30466980 gaggaacaaactccaatatcccaaaccaaccactaggccaacc 30467022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 36390707 - 36390758
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| |||||||| |||||||||  ||||||||| ||||||||||||||||||    
T  36390707 tgagacctttggagaagcaaactc--agatcccaaaccaaccactaggccaacc 36390758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 44610132 - 44610090
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaacca 46  Q
    ||||| ||||||| ||||||||||||||||| |||||||||||    
T  44610132 tgagacctttggaagagcaaactccaagatctcaagccaacca 44610090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 1191571 - 1191530
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaacc 45  Q
    ||||| || |||||||||||||||||||||| ||||||||||    
T  1191571 tgagacctctggaggagcaaactccaagatctcaagccaacc 1191530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 14946826 - 14946785
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaac 56  Q
    |||||||||||| ||||||| |||| ||||||||||||||||    
T  14946826 gaggagcaaacttcaagatctcaagtcaaccactaggccaac 14946785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 45
Target Start/End: Original strand, 43374476 - 43374505
Alignment:
Q  16 aggagcaaactccaagatcccaagccaacc 45  Q
    ||||||||||||||||||||||||||||||    
T  43374476 aggagcaaactccaagatcccaagccaacc 43374505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 5861310 - 5861274
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactagg 51  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  5861310 gaggagcaaattccaagatcacaagccaaccactagg 5861274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29698208 - 29698164
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagccaacc 45  Q
    |||||||| |||  |||||||||| ||||||||||||||||||||    
T  29698208 acttgagaccttgagaggagcaaattccaagatcccaagccaacc 29698164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 1195 - 1248
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  1195 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 1248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 10832 - 10885
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  10832 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 10885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 9438 - 9491
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  9438 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 9491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 12139 - 12192
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  12139 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 12192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 7448 - 7501
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  7448 tgagatctctggaggagcaaactccaagatcccaagccaactactaggccaacc 7501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 8546 - 8599
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  8546 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 8599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 97505 - 97558
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  97505 tgagacctttggaggagcaaactacaagatcccaagccaaccactaggccaacc 97558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 6e-17; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 4621376 - 4621429
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  4621376 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 4621429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 7197385 - 7197438
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  7197385 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 7197438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 8077705 - 8077652
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  8077705 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 8077652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 24674451 - 24674398
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  24674451 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 24674398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 34778400 - 34778347
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  34778400 tgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacc 34778347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 46607868 - 46607815
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  46607868 tgagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaacc 46607815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 1378949 - 1378896
Alignment:
Q  11 tttggaggagcaaactccaagatcccaagccaaccactaggccaacctgaaatg 64  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||| |||||    
T  1378949 tttggaggagcaaactccaagatcccaagtcaaccactaagccaaccttaaatg 1378896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 7766866 - 7766919
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||| ||||||||||||||||    
T  7766866 tgagacctctggaggagcaaactccaagatcccaagctaaccactaggccaacc 7766919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 15059541 - 15059594
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || ||||||||||||||||||||| |||||||||||||||||||||||    
T  15059541 tgagacctctggaggagcaaactccaagattccaagccaaccactaggccaacc 15059594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 27455005 - 27455058
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||||||||||||||| ||||||    
T  27455005 tgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaacc 27455058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 29057476 - 29057529
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| |||||||| |||||||||||||||||||| ||||||||||||||||||    
T  29057476 tgagacctttggagcagcaaactccaagatcccaaaccaaccactaggccaacc 29057529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 46113541 - 46113594
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||||||||||||||||||||||||| ||||||||||||||||||    
T  46113541 tgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaacc 46113594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 6776196 - 6776149
Alignment:
Q  10 ctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  6776196 ctttgaaggagcaaactccaagatcccaaaccaaccactaggccaacc 6776149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 14258575 - 14258617
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaa 55  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  14258575 tggaggaacaaactccaagatcccaagccaaccactaggccaa 14258617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 32729592 - 32729550
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  32729592 gaggagcaaactcgaagatcccaagccaaccactaggccaacc 32729550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 24122081 - 24122028
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || ||||||||||||| ||||||||||||||||||||||| |||||||    
T  24122081 tgagacctctggaggagcaaaccccaagatcccaagccaaccactaagccaacc 24122028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 30677234 - 30677181
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||||||| |||||    
T  30677234 tgagacctttggaggagcaaactcctagatcccaaaccaaccactaggtcaacc 30677181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 168259 - 168207
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaac 56  Q
    ||||| ||||| | |||||||||| ||||||||||||||||||||||||||||    
T  168259 tgagacctttgaaagagcaaactctaagatcccaagccaaccactaggccaac 168207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 7578467 - 7578419
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggc 52  Q
    ||||| || ||||||| ||||||||||||||||||||||||||||||||    
T  7578467 tgagacctctggaggaacaaactccaagatcccaagccaaccactaggc 7578419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20487326 - 20487374
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagccaaccacta 49  Q
    |||||||| || |||||||||||||||||||||||| ||||||||||||    
T  20487326 acttgagacctctggaggagcaaactccaagatcccgagccaaccacta 20487374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 47
Target Start/End: Original strand, 37351607 - 37351643
Alignment:
Q  11 tttggaggagcaaactccaagatcccaagccaaccac 47  Q
    |||||||||||||||||||||||||||||||||||||    
T  37351607 tttggaggagcaaactccaagatcccaagccaaccac 37351643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 47091735 - 47091695
Alignment:
Q  17 ggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  47091735 ggagcaaactccaagatctcaagccaaccactaggccaacc 47091695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25496624 - 25496679
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaac 56  Q
    |||||||| |||  ||||||||| ||||||||||||||||||| ||||||||||||    
T  25496624 acttgagaccttaagaggagcaatctccaagatcccaagccaatcactaggccaac 25496679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 7946905 - 7946855
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagccaaccactagg 51  Q
    |||||||| || |||||||||||||| ||||||| ||||||||||||||||    
T  7946905 acttgagacctctggaggagcaaacttcaagatctcaagccaaccactagg 7946855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 17935827 - 17935777
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggcca 54  Q
    ||||| || ||||||||||||||||||||||||||| ||||||||| ||||    
T  17935827 tgagacctctggaggagcaaactccaagatcccaagtcaaccactatgcca 17935777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 1378803 - 1378750
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| ||||||||||| |||||||||||| ||||| |||||||||| ||||||    
T  1378803 tgagacctttggaggagtaaactccaagattccaagtcaaccactagaccaacc 1378750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 2272390 - 2272349
Alignment:
Q  16 aggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||| ||||||||||| |||||||||||||||||    
T  2272390 aggagcaaactctaagatcccaagtcaaccactaggccaacc 2272349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 33905649 - 33905690
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaacc 45  Q
    ||||| || |||||||||||||||||||||||||||||||||    
T  33905649 tgagacctctggaggagcaaactccaagatcccaagccaacc 33905690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 52135174 - 52135135
Alignment:
Q  18 gagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  52135174 gagcaaactccaagatcccaagtcaaccactagaccaacc 52135135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 809269 - 809227
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||| ||||||||||||||||| |||||||| |||||||||    
T  809269 gaggagtaaactccaagatcccaaaccaaccacgaggccaacc 809227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 1138626 - 1138584
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| ||||||||||| |||||||||||||||| |||||    
T  1138626 gaggagcacactccaagatctcaagccaaccactaggtcaacc 1138584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 23232413 - 23232455
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaa 55  Q
    |||| ||||||||| |||||||||||| |||||||||||||||    
T  23232413 tggaagagcaaacttcaagatcccaagtcaaccactaggccaa 23232455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 24217025 - 24216983
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| |||||||||||||||| ||||||||||| |||||    
T  24217025 gaggagcacactccaagatcccaagtcaaccactaggtcaacc 24216983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 1095154 - 1095187
Alignment:
Q  24 actccaagatcccaagccaaccactaggccaacc 57  Q
    ||||||||||||||||||||||||||| ||||||    
T  1095154 actccaagatcccaagccaaccactagaccaacc 1095187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 1486458 - 1486425
Alignment:
Q  24 actccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||||||||||| |||||    
T  1486458 actccaagatcccaagccaaccactaggtcaacc 1486425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 10059102 - 10059065
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggc 52  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  10059102 gaggagcaaactccaagatctcaagtcaaccactaggc 10059065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 18646911 - 18646858
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || ||||| ||||||||| |||||| |||||||||||||||| |||||    
T  18646911 tgagacctctggagaagcaaactcaaagatcacaagccaaccactaggtcaacc 18646858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 44
Target Start/End: Original strand, 45859193 - 45859222
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaac 44  Q
    ||||||||||||||||||||||||||||||    
T  45859193 gaggagcaaactccaagatcccaagccaac 45859222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 1818783 - 1818739
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||| |||||||||||||||||| |||||||| || |||||||||    
T  1818783 tggaagagcaaactccaagatcctaagccaactaccaggccaacc 1818739  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 21726787 - 21726727
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacctgaaatg 64  Q
    ||||| || |||||||||||||| ||||| |||||  ||||||||||| |||||| |||||    
T  21726787 tgagacctctggaggagcaaacttcaagaacccaaatcaaccactaggtcaacctcaaatg 21726727  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 32930810 - 32930754
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||| || || ||||| |||||||||||| |||| |||||||||||| |||||    
T  32930810 acttgagacctctgaaggagtaaactccaagattccaaaccaaccactaggtcaacc 32930754  T

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Target: scaffold0049 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 66820 - 66769
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaa 55  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  66820 tgagacctttggaggagcaaactccaagatcccaagccaaccactagaccaa 66769  T

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Target: scaffold0051 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 53019 - 53061
Alignment:
Q  13 tggaggagcaaactccaagatcccaagccaaccactaggccaa 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  53019 tggaggagcaaactccaagatcccaagccaaccactaggccaa 53061  T

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Target: scaffold0328 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 15049 - 14996
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || ||||||||||||||||||||||||| |||||||||||||||||||    
T  15049 tgagacctctggaggagcaaactccaagatcccaggccaaccactaggccaacc 14996  T

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Target: scaffold0068 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 41783 - 41836
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || ||||||||||||||||||||||||||| |||||||||||||||||    
T  41783 tgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaacc 41836  T

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Target: scaffold0240 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 12893 - 12944
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaa 55  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||||||||    
T  12893 tgagatctctggaggagcgaactccaagatcccaagtcaaccactaggccaa 12944  T

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Target: scaffold0717 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 97 - 150
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||| || |||| ||||||||||||||||| ||||||||||||||||||||||    
T  97 tgagacctctggacgagcaaactccaagatcacaagccaaccactaggccaacc 150  T

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Target: scaffold0070 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 40371 - 40330
Alignment:
Q  16 aggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  40371 aggagcaaactccaagatcctaagccaaccactaggccaacc 40330  T

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Target: scaffold0460 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8315 - 8363
Alignment:
Q  1 acttgagatctttggaggagcaaactccaagatcccaagccaaccacta 49  Q
    |||||||| || |||||||||||||||||||||||| ||||||||||||    
T  8315 acttgagacctctggaggagcaaactccaagatcccgagccaaccacta 8363  T

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Target: scaffold0019 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 161867 - 161828
Alignment:
Q  4 tgagatctttggaggagcaaactccaagatcccaagccaa 43  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  161867 tgagacctctggaggagcaaactccaagatcccaagccaa 161828  T

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Target: scaffold0337 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 1808 - 1763
Alignment:
Q  14 ggaggagcaaactccaagatcccaagcca--accactaggccaacc 57  Q
    |||||||||||||||||| ||||||||||  |||||||||||||||    
T  1808 ggaggagcaaactccaaggtcccaagccaacaccactaggccaacc 1763  T

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Target: scaffold0200 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 26697 - 26735
Alignment:
Q  19 agcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  26697 agcaaactccaagatcctaagccaaccagtaggccaacc 26735  T

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Target: scaffold0065 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 12244 - 12199
Alignment:
Q  14 ggaggagcaaactccaagatcccaagcca--accactaggccaacc 57  Q
    |||||||||||||||||| ||||||||||  |||||||||||||||    
T  12244 ggaggagcaaactccaaggtcccaagccaacaccactaggccaacc 12199  T

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Target: scaffold0028 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 27823 - 27781
Alignment:
Q  15 gaggagcaaactccaagatcccaagccaaccactaggccaacc 57  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||    
T  27823 gaggagcaaactccaaaatcccaaaccaaccactagaccaacc 27781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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