View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6232_high_7 (Length: 276)
Name: NF6232_high_7
Description: NF6232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6232_high_7 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 20 - 265
Target Start/End: Complemental strand, 44650113 - 44649868
Alignment:
| Q |
20 |
gatcaaacaatcacctggtctttgttaattgttagatttcttattatttttccgttaaatggaaattgtcatattcaaatcgtgtgtatcctctnnnnnn |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44650113 |
gatcaaacaatcacctggtctttgttaattgttagatttcttattatttttccgttaaatggaaattgtcatattcaaatcgtgtgtatcctctaaaaaa |
44650014 |
T |
|
| Q |
120 |
nntcatgtgaatatgtagcaaactttttgataaagaaatccttaatttacaaaccccatgtagcttatgcaagaggatagtcaatagaacctaactccaa |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
44650013 |
aatcatgtgaatatgtagcaaactttttgataaagaaatccttaatttacaaaccccatgtagcttatgcaagaggatagtcaatagaacctaacaccaa |
44649914 |
T |
|
| Q |
220 |
accaaaacaagcaaattaataagacaaaaacttgtttacggttcat |
265 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44649913 |
accaaaacaagcaaattaataagacaaaaacttgtttacggttcat |
44649868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University