View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6232_low_17 (Length: 208)

Name: NF6232_low_17
Description: NF6232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6232_low_17
NF6232_low_17
[»] chr2 (46 HSPs)
chr2 (1-200)||(36987925-36988133)
chr2 (1-200)||(6594854-6595063)
chr2 (1-200)||(45099865-45100072)
chr2 (1-197)||(4502986-4503190)
chr2 (1-200)||(17057219-17057426)
chr2 (1-200)||(17085202-17085409)
chr2 (1-200)||(36205515-36205722)
chr2 (1-200)||(38312351-38312558)
chr2 (1-200)||(2334268-2334475)
chr2 (1-200)||(5723106-5723313)
chr2 (1-200)||(723597-723801)
chr2 (1-200)||(39284947-39285152)
chr2 (5-200)||(11067420-11067618)
chr2 (1-200)||(34139623-34139827)
chr2 (1-200)||(4484178-4484387)
chr2 (1-198)||(36317866-36318066)
chr2 (1-200)||(14633678-14633882)
chr2 (1-200)||(29867980-29868186)
chr2 (1-160)||(30833457-30833626)
chr2 (4-200)||(32289678-32289886)
chr2 (38-197)||(2838102-2838260)
chr2 (4-200)||(33162304-33162504)
chr2 (1-176)||(11151470-11151648)
chr2 (1-150)||(11690612-11690766)
chr2 (1-149)||(36773673-36773825)
chr2 (1-200)||(42362463-42362663)
chr2 (40-197)||(14202277-14202440)
chr2 (38-152)||(1345613-1345733)
chr2 (76-202)||(24885780-24885905)
chr2 (7-140)||(11049671-11049808)
chr2 (1-62)||(6266802-6266863)
chr2 (1-62)||(12647382-12647443)
chr2 (1-62)||(13656028-13656089)
chr2 (1-58)||(45727040-45727096)
chr2 (1-200)||(26353295-26353488)
chr2 (79-200)||(12123442-12123560)
chr2 (1-58)||(35446885-35446941)
chr2 (1-60)||(24398169-24398228)
chr2 (1-58)||(33648283-33648340)
chr2 (1-65)||(17450689-17450751)
chr2 (1-56)||(1631735-1631789)
chr2 (1-117)||(28672042-28672163)
chr2 (76-153)||(13121956-13122031)
chr2 (5-105)||(17490097-17490201)
chr2 (5-58)||(7451233-7451284)
chr2 (1-53)||(42288117-42288167)
[»] chr3 (69 HSPs)
chr3 (1-200)||(7762376-7762584)
chr3 (1-200)||(9581393-9581601)
chr3 (1-200)||(19683738-19683946)
chr3 (5-200)||(37408573-37408777)
chr3 (1-197)||(7764575-7764780)
chr3 (1-200)||(9635974-9636183)
chr3 (1-200)||(40735494-40735700)
chr3 (1-200)||(5257994-5258201)
chr3 (1-200)||(5260173-5260380)
chr3 (1-200)||(29810979-29811186)
chr3 (1-200)||(29813174-29813379)
chr3 (1-200)||(40734609-40734815)
chr3 (1-200)||(22834857-22835059)
chr3 (1-200)||(760958-761162)
chr3 (1-200)||(45095274-45095481)
chr3 (1-200)||(29196240-29196443)
chr3 (1-200)||(39153215-39153418)
chr3 (4-195)||(5236312-5236510)
chr3 (1-200)||(51398925-51399132)
chr3 (1-200)||(31314556-31314758)
chr3 (1-200)||(44700334-44700535)
chr3 (1-200)||(23199987-23200195)
chr3 (1-150)||(16499140-16499292)
chr3 (5-197)||(23391766-23391962)
chr3 (83-200)||(9634671-9634787)
chr3 (1-149)||(9666371-9666523)
chr3 (1-200)||(29682470-29682674)
chr3 (1-160)||(23197828-23197996)
chr3 (76-200)||(21350861-21350981)
chr3 (1-76)||(34491323-34491397)
chr3 (1-198)||(23410184-23410386)
chr3 (1-200)||(27305567-27305767)
chr3 (1-160)||(7779891-7780061)
chr3 (5-148)||(32744349-32744489)
chr3 (1-146)||(32891215-32891364)
chr3 (1-62)||(801203-801264)
chr3 (1-62)||(3617561-3617622)
chr3 (1-135)||(53921422-53921560)
chr3 (4-200)||(2074932-2075129)
chr3 (1-62)||(6716610-6716671)
chr3 (1-62)||(25637538-25637599)
chr3 (1-62)||(43403740-43403801)
chr3 (1-62)||(45283097-45283158)
chr3 (1-62)||(54635235-54635296)
chr3 (76-200)||(51351990-51352111)
chr3 (1-58)||(4570063-4570120)
chr3 (1-62)||(4598519-4598580)
chr3 (1-58)||(6095600-6095656)
chr3 (1-62)||(10056330-10056391)
chr3 (1-62)||(10058552-10058613)
chr3 (1-62)||(10060774-10060835)
chr3 (1-62)||(10062996-10063057)
chr3 (1-62)||(10065218-10065279)
chr3 (1-62)||(10211506-10211567)
chr3 (1-62)||(43401797-43401858)
chr3 (1-62)||(49199465-49199526)
chr3 (1-58)||(55301972-55302029)
chr3 (1-63)||(44331656-44331717)
chr3 (1-62)||(4600740-4600801)
chr3 (1-62)||(10209286-10209347)
chr3 (1-62)||(40913404-40913464)
chr3 (1-58)||(54593815-54593871)
chr3 (19-62)||(10067435-10067478)
chr3 (1-34)||(5433906-5433939)
chr3 (1-58)||(41819523-41819580)
chr3 (1-60)||(30236236-30236294)
chr3 (1-60)||(47304362-47304420)
chr3 (1-58)||(46860585-46860642)
chr3 (1-49)||(46173468-46173515)
[»] chr7 (62 HSPs)
chr7 (1-200)||(23555151-23555359)
chr7 (4-200)||(25615967-25616173)
chr7 (1-200)||(35854025-35854234)
chr7 (1-200)||(29991164-29991371)
chr7 (5-200)||(27347932-27348135)
chr7 (1-200)||(41648864-41649068)
chr7 (1-200)||(48489542-48489749)
chr7 (1-200)||(495838-496040)
chr7 (1-200)||(19502289-19502496)
chr7 (1-200)||(41317289-41317491)
chr7 (1-200)||(1113768-1113970)
chr7 (1-197)||(48491690-48491891)
chr7 (1-200)||(31732819-31733026)
chr7 (1-200)||(14069684-14069890)
chr7 (1-200)||(14379712-14379918)
chr7 (1-160)||(39731480-39731649)
chr7 (2-200)||(47675987-47676192)
chr7 (1-197)||(43864355-43864559)
chr7 (1-200)||(4586272-4586479)
chr7 (9-197)||(18126763-18126961)
chr7 (10-200)||(4178893-4179091)
chr7 (4-200)||(36146262-36146462)
chr7 (1-200)||(8153453-8153655)
chr7 (1-200)||(25766807-25767017)
chr7 (77-197)||(26417511-26417631)
chr7 (1-202)||(24525354-24525559)
chr7 (1-198)||(47673797-47674000)
chr7 (1-200)||(48408915-48409125)
chr7 (1-160)||(43504044-43504211)
chr7 (1-198)||(30024609-30024789)
chr7 (1-132)||(12097789-12097924)
chr7 (1-197)||(31105253-31105450)
chr7 (5-141)||(38671133-38671275)
chr7 (1-65)||(34310709-34310773)
chr7 (1-62)||(18388756-18388817)
chr7 (1-62)||(18392192-18392253)
chr7 (1-149)||(31519013-31519158)
chr7 (1-62)||(6592336-6592397)
chr7 (1-62)||(6594554-6594615)
chr7 (1-58)||(22270084-22270140)
chr7 (13-62)||(24789964-24790013)
chr7 (1-62)||(32060318-32060379)
chr7 (1-58)||(32358055-32358111)
chr7 (1-137)||(36574434-36574572)
chr7 (1-85)||(30814547-30814629)
chr7 (76-200)||(23344163-23344283)
chr7 (76-153)||(23564962-23565040)
chr7 (1-62)||(1560662-1560723)
chr7 (1-62)||(2390393-2390453)
chr7 (1-58)||(3259106-3259162)
chr7 (4-140)||(4253443-4253582)
chr7 (1-58)||(8359316-8359373)
chr7 (1-62)||(20344008-20344068)
chr7 (1-54)||(6432082-6432134)
chr7 (1-58)||(48599335-48599391)
chr7 (1-120)||(2759127-2759254)
chr7 (1-58)||(4508707-4508763)
chr7 (1-58)||(18396429-18396486)
chr7 (9-81)||(5513645-5513716)
chr7 (1-60)||(6359951-6360009)
chr7 (1-56)||(29608848-29608902)
chr7 (4-81)||(26639439-26639516)
[»] chr4 (60 HSPs)
chr4 (1-200)||(56178486-56178694)
chr4 (4-197)||(5369935-5370137)
chr4 (1-198)||(47038268-47038468)
chr4 (1-200)||(48143154-48143366)
chr4 (1-200)||(48893493-48893695)
chr4 (1-200)||(9927309-9927515)
chr4 (1-198)||(52095214-52095419)
chr4 (1-176)||(5429790-5429973)
chr4 (1-200)||(34570264-34570471)
chr4 (6-198)||(52082515-52082716)
chr4 (1-200)||(26175487-26175693)
chr4 (1-200)||(52467208-52467411)
chr4 (1-200)||(12743779-12743982)
chr4 (1-200)||(46147246-46147448)
chr4 (1-200)||(13992141-13992350)
chr4 (4-200)||(5871934-5872135)
chr4 (1-193)||(12739411-12739607)
chr4 (1-200)||(37740736-37740943)
chr4 (1-197)||(36463249-36463446)
chr4 (1-200)||(45687037-45687239)
chr4 (1-202)||(31474262-31474466)
chr4 (4-200)||(54199758-54199960)
chr4 (1-178)||(36994635-36994814)
chr4 (1-193)||(29254605-29254804)
chr4 (1-200)||(6542037-6542236)
chr4 (1-200)||(4588070-4588269)
chr4 (1-144)||(29999716-29999863)
chr4 (1-200)||(37229578-37229778)
chr4 (1-160)||(31495196-31495373)
chr4 (1-85)||(12745288-12745371)
chr4 (1-62)||(8393505-8393566)
chr4 (1-62)||(8395714-8395775)
chr4 (1-62)||(2209825-2209886)
chr4 (1-55)||(41964527-41964580)
chr4 (1-62)||(5136176-5136237)
chr4 (1-62)||(5138401-5138462)
chr4 (1-58)||(8648250-8648306)
chr4 (1-58)||(41639537-41639593)
chr4 (1-58)||(50673848-50673904)
chr4 (76-140)||(5207755-5207818)
chr4 (1-58)||(379491-379548)
chr4 (94-176)||(3913789-3913867)
chr4 (1-58)||(6656067-6656123)
chr4 (1-58)||(46703612-46703669)
chr4 (1-62)||(50262697-50262758)
chr4 (1-65)||(27416959-27417022)
chr4 (1-60)||(7122794-7122853)
chr4 (79-138)||(29056552-29056610)
chr4 (1-62)||(7125013-7125074)
chr4 (1-38)||(8665519-8665556)
chr4 (1-58)||(12073503-12073560)
chr4 (1-81)||(13009421-13009501)
chr4 (1-117)||(21703772-21703892)
chr4 (1-58)||(40632556-40632612)
chr4 (38-85)||(3796591-3796638)
chr4 (1-60)||(26364347-26364405)
chr4 (1-60)||(54883131-54883189)
chr4 (12-81)||(24969787-24969855)
chr4 (1-50)||(35662552-35662600)
chr4 (76-153)||(37754862-37754937)
[»] chr1 (66 HSPs)
chr1 (1-200)||(8550634-8550844)
chr1 (1-200)||(3156976-3157183)
chr1 (1-200)||(834020-834224)
chr1 (1-197)||(4552502-4552694)
chr1 (1-200)||(49918461-49918668)
chr1 (4-200)||(40122051-40122250)
chr1 (1-197)||(44455271-44455475)
chr1 (1-200)||(13316202-13316409)
chr1 (1-200)||(20762783-20762986)
chr1 (1-200)||(37559715-37559925)
chr1 (1-141)||(3189441-3189590)
chr1 (1-141)||(3198258-3198407)
chr1 (1-141)||(3207097-3207246)
chr1 (1-200)||(10925337-10925540)
chr1 (5-200)||(13137831-13138029)
chr1 (1-200)||(50167030-50167232)
chr1 (1-160)||(51765508-51765677)
chr1 (5-200)||(50169065-50169263)
chr1 (1-200)||(28223272-28223478)
chr1 (1-174)||(28220103-28220283)
chr1 (1-197)||(31659349-31659553)
chr1 (1-197)||(28265412-28265611)
chr1 (1-200)||(45644208-45644411)
chr1 (1-200)||(23555121-23555322)
chr1 (1-176)||(37503431-37503614)
chr1 (1-197)||(3846974-3847178)
chr1 (1-150)||(13659241-13659393)
chr1 (55-197)||(1833677-1833823)
chr1 (1-177)||(46065029-46065207)
chr1 (1-197)||(30476300-30476503)
chr1 (28-200)||(196760-196937)
chr1 (5-200)||(41361029-41361228)
chr1 (1-62)||(9987312-9987373)
chr1 (1-62)||(20622233-20622294)
chr1 (1-58)||(29136358-29136415)
chr1 (1-62)||(40282488-40282549)
chr1 (1-62)||(44203743-44203804)
chr1 (1-202)||(16455732-16455936)
chr1 (1-58)||(13547090-13547146)
chr1 (1-58)||(13549001-13549057)
chr1 (1-62)||(37033068-37033129)
chr1 (1-58)||(37168409-37168465)
chr1 (5-62)||(42297971-42298028)
chr1 (5-118)||(44646743-44646857)
chr1 (5-118)||(44650101-44650215)
chr1 (79-198)||(8870580-8870698)
chr1 (11-62)||(9036537-9036588)
chr1 (1-58)||(11348809-11348865)
chr1 (1-62)||(21054069-21054130)
chr1 (1-58)||(28242415-28242472)
chr1 (1-58)||(47255340-47255397)
chr1 (5-200)||(15820422-15820614)
chr1 (1-58)||(193722-193778)
chr1 (1-58)||(7482231-7482287)
chr1 (1-58)||(31925708-31925764)
chr1 (1-58)||(47115283-47115340)
chr1 (76-140)||(5460097-5460160)
chr1 (1-64)||(19752797-19752859)
chr1 (76-197)||(927836-927954)
chr1 (5-54)||(34603692-34603740)
chr1 (76-140)||(16914089-16914153)
chr1 (38-85)||(19072906-19072953)
chr1 (38-85)||(19120796-19120843)
chr1 (1-72)||(19754606-19754676)
chr1 (1-47)||(8871074-8871119)
chr1 (5-58)||(37876767-37876819)
[»] chr8 (51 HSPs)
chr8 (1-200)||(34254181-34254388)
chr8 (1-200)||(42498305-42498513)
chr8 (1-200)||(17982764-17982971)
chr8 (1-200)||(34256357-34256564)
chr8 (1-200)||(4731769-4731976)
chr8 (1-200)||(15212897-15213104)
chr8 (1-197)||(1746072-1746276)
chr8 (4-200)||(31218371-31218575)
chr8 (1-200)||(44303966-44304173)
chr8 (1-200)||(19945209-19945416)
chr8 (5-197)||(27811393-27811593)
chr8 (1-200)||(40321191-40321393)
chr8 (1-200)||(33352261-33352468)
chr8 (1-150)||(4743118-4743271)
chr8 (4-200)||(6599086-6599283)
chr8 (4-200)||(6674539-6674736)
chr8 (1-200)||(30143451-30143658)
chr8 (1-200)||(41366468-41366671)
chr8 (4-200)||(43036537-43036740)
chr8 (1-200)||(5689382-5689585)
chr8 (5-200)||(1345226-1345424)
chr8 (1-200)||(4733817-4734024)
chr8 (76-200)||(18105926-18106049)
chr8 (5-200)||(3303521-3303723)
chr8 (1-200)||(12702481-12702691)
chr8 (12-200)||(1292319-1292509)
chr8 (1-156)||(2627847-2628012)
chr8 (1-200)||(10015191-10015392)
chr8 (5-200)||(19491553-19491752)
chr8 (1-174)||(18141931-18142105)
chr8 (1-140)||(3073789-3073930)
chr8 (1-134)||(30291718-30291856)
chr8 (1-62)||(3439614-3439675)
chr8 (1-62)||(25690065-25690126)
chr8 (4-58)||(18655514-18655567)
chr8 (1-58)||(42434992-42435048)
chr8 (1-62)||(42575320-42575381)
chr8 (87-149)||(3051028-3051090)
chr8 (1-58)||(4283635-4283691)
chr8 (1-54)||(15290635-15290688)
chr8 (1-54)||(15471004-15471057)
chr8 (3-106)||(8965639-8965746)
chr8 (1-65)||(40221856-40221919)
chr8 (1-60)||(10930198-10930256)
chr8 (101-176)||(4162684-4162755)
chr8 (1-137)||(7597726-7597866)
chr8 (1-58)||(11384096-11384152)
chr8 (75-140)||(11711911-11711975)
chr8 (83-140)||(32902096-32902152)
chr8 (1-53)||(18106087-18106137)
chr8 (1-81)||(38863969-38864049)
[»] chr6 (43 HSPs)
chr6 (1-200)||(5408920-5409126)
chr6 (1-200)||(5413245-5413451)
chr6 (1-200)||(31404525-31404732)
chr6 (1-200)||(9182881-9183088)
chr6 (1-197)||(16452181-16452386)
chr6 (1-174)||(33211066-33211242)
chr6 (1-197)||(16569133-16569334)
chr6 (1-200)||(26954141-26954343)
chr6 (1-200)||(33160201-33160409)
chr6 (1-200)||(30834384-30834593)
chr6 (1-197)||(5406056-5406257)
chr6 (1-197)||(5410381-5410582)
chr6 (1-200)||(2171377-2171589)
chr6 (1-200)||(28137261-28137465)
chr6 (1-200)||(3072607-3072816)
chr6 (75-189)||(14521543-14521656)
chr6 (1-62)||(6097447-6097508)
chr6 (55-149)||(3038828-3038927)
chr6 (4-62)||(412216-412274)
chr6 (1-62)||(25421417-25421478)
chr6 (1-62)||(3808704-3808765)
chr6 (1-58)||(5043738-5043795)
chr6 (1-62)||(6027358-6027419)
chr6 (1-62)||(16554980-16555041)
chr6 (1-62)||(16578514-16578575)
chr6 (1-62)||(16616805-16616866)
chr6 (1-62)||(16631536-16631597)
chr6 (1-62)||(16653223-16653284)
chr6 (1-58)||(21589042-21589098)
chr6 (1-58)||(21593775-21593831)
chr6 (1-62)||(34167191-34167252)
chr6 (1-62)||(13154026-13154087)
chr6 (1-58)||(17763101-17763158)
chr6 (1-58)||(26830124-26830180)
chr6 (1-62)||(27647971-27648032)
chr6 (1-62)||(33342101-33342162)
chr6 (1-62)||(34164969-34165030)
chr6 (1-58)||(17758134-17758191)
chr6 (1-58)||(26800698-26800755)
chr6 (1-58)||(2972940-2972996)
chr6 (1-58)||(22424826-22424883)
chr6 (1-62)||(603085-603145)
chr6 (76-140)||(4045608-4045671)
[»] chr5 (51 HSPs)
chr5 (1-197)||(13239862-13240066)
chr5 (1-200)||(13343171-13343378)
chr5 (1-200)||(30182699-30182906)
chr5 (1-191)||(37439252-37439450)
chr5 (1-200)||(25412871-25413078)
chr5 (4-200)||(39468399-39468603)
chr5 (1-200)||(36073893-36074100)
chr5 (1-200)||(538136-538338)
chr5 (1-200)||(30682773-30682979)
chr5 (1-200)||(42428281-42428487)
chr5 (1-200)||(16409586-16409797)
chr5 (1-197)||(32636935-32637138)
chr5 (5-200)||(33831795-33831996)
chr5 (1-200)||(28750506-28750712)
chr5 (1-200)||(26177993-26178204)
chr5 (1-200)||(8565798-8566003)
chr5 (1-200)||(42426086-42426292)
chr5 (1-199)||(19806474-19806679)
chr5 (1-148)||(26170873-26171032)
chr5 (1-200)||(533880-534076)
chr5 (1-197)||(13488314-13488515)
chr5 (38-200)||(16649685-16649851)
chr5 (1-200)||(31183082-31183291)
chr5 (23-200)||(42927024-42927210)
chr5 (1-58)||(213576-213633)
chr5 (6-200)||(5887285-5887486)
chr5 (1-156)||(9789116-9789281)
chr5 (1-85)||(28278427-28278510)
chr5 (1-153)||(16452191-16452350)
chr5 (1-62)||(10593369-10593430)
chr5 (1-62)||(18441644-18441705)
chr5 (1-62)||(25078232-25078293)
chr5 (1-62)||(25136201-25136262)
chr5 (1-62)||(29751156-29751217)
chr5 (1-62)||(40380202-40380263)
chr5 (1-62)||(40382413-40382474)
chr5 (1-117)||(9049285-9049399)
chr5 (11-62)||(22536286-22536337)
chr5 (1-62)||(29720475-29720536)
chr5 (1-62)||(29722635-29722696)
chr5 (1-58)||(40147372-40147428)
chr5 (1-58)||(5058156-5058212)
chr5 (1-62)||(16544520-16544581)
chr5 (1-62)||(16546742-16546803)
chr5 (1-81)||(3075636-3075715)
chr5 (7-72)||(27015640-27015704)
chr5 (1-56)||(27637615-27637670)
chr5 (1-58)||(16640941-16640997)
chr5 (1-53)||(4160710-4160762)
chr5 (38-85)||(10281729-10281776)
chr5 (4-81)||(13695668-13695744)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-160)||(434644-434812)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-200)||(114713-114921)
[»] scaffold0066 (1 HSPs)
scaffold0066 (1-200)||(20265-20472)
[»] scaffold0491 (2 HSPs)
scaffold0491 (1-160)||(8623-8792)
scaffold0491 (1-160)||(11049-11218)
[»] scaffold1519 (1 HSPs)
scaffold1519 (1-160)||(1026-1194)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-150)||(149002-149154)
[»] scaffold0286 (1 HSPs)
scaffold0286 (1-200)||(11668-11884)
[»] scaffold1668 (1 HSPs)
scaffold1668 (55-200)||(1352-1502)
[»] scaffold0565 (1 HSPs)
scaffold0565 (1-64)||(2598-2661)
[»] scaffold0674 (1 HSPs)
scaffold0674 (1-62)||(3722-3783)
[»] scaffold0219 (1 HSPs)
scaffold0219 (1-126)||(27370-27499)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-58)||(18004-18061)
[»] scaffold0236 (1 HSPs)
scaffold0236 (5-58)||(10604-10656)
[»] scaffold0137 (1 HSPs)
scaffold0137 (1-62)||(6384-6445)
[»] scaffold0466 (1 HSPs)
scaffold0466 (1-58)||(7438-7494)
[»] scaffold1808 (1 HSPs)
scaffold1808 (26-62)||(1-37)


Alignment Details
Target: chr2 (Bit Score: 141; Significance: 4e-74; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 36988133 - 36987925
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||         ||||||     
T  36988133 ttggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttt 36988034  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||  |||||||||||    
T  36988033 tgcttgtggctttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgtttactttgaaattggttactactt 36987934  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  36987933 tcctttgct 36987925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 6595063 - 6594854
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt----------tatctt 90  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||          ||||||    
T  6595063 ttggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgagtgaacaatctttggtgtgtttgtttctctcttctctcccttttatctt 6594964  T
Q  91 gtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactact 190  Q
     ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||  ||||||| ||||||| |  ||||||||||    
T  6594963 ttgcttgtggttttgtgcttttcactttgatttctagattagatctaggtgctgttattgttgattattacttgtgttcactttgatattggttactact 6594864  T
Q  191 ttcctttgct 200  Q
    || |||||||    
T  6594863 ttactttgct 6594854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 45099865 - 45100072
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||         ||| ||     
T  45099865 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatattt 45099964  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| |  |||||||||||    
T  45099965 tgcttgtgattt-gtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactt 45100063  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  45100064 tcctttgct 45100072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 4503190 - 4502986
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         |||||||||    
T  4503190 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttg 4503091  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||  || ||||||  |  |||||||||||    
T  4503090 tgcttgt-gttttgtgcttttcactttgtttcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgttattggttactactt 4502992  T
Q  192 tccttt 197  Q
    ||||||    
T  4502991 tccttt 4502986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 17057426 - 17057219
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||         ||||||||     
T  17057426 ttggagagatcaatctctcccccagactaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgttcctctcgtctctccctttatcttt 17057328  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| |  |||||||||||    
T  17057327 tgcttgtggttttgtgcttttcactttaattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactt 17057228  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  17057227 tcctttgct 17057219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 17085409 - 17085202
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||         ||||||||     
T  17085409 ttggagagatcaatctctcccccagactaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgttcctctcgtctctccctttatcttt 17085311  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| |  |||||||||||    
T  17085310 tgcttgtggttttgtgcttttcactttaattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactt 17085211  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  17085210 tcctttgct 17085202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 36205722 - 36205515
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||         ||| ||     
T  36205722 ttggagagttcaatctatcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatattt 36205623  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||  |  |||||||||||    
T  36205622 tgcttgtggtttc-tgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgttattggttactactt 36205524  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  36205523 tcctttgct 36205515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 38312351 - 38312558
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||| ||| | || |||||||| |||||||||||||| |||||||||||||||||||||| |||||||         ||||||     
T  38312351 ttggagagatcaatctctcccccagattatgtcaagtt-ggaccgaactgggtcaacaatctttgatgtgtttgttcctctcttctctccctttatcttt 38312449  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||| ||||||| |  |||||||||||    
T  38312450 tgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattgttgcttgtgttcactttgatattggttactactt 38312549  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  38312550 tcctttgct 38312558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 2334475 - 2334268
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct---------ctttatcttg 91  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||         ||||||||||    
T  2334475 ttggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggggaacaatctttggtgtgtttgtttctctcttctctccctttatcttg 2334376  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||||||||   |||||||||||||| | | |||||||||||||| ||||||| ||| || ||| |||||||||||||||||  |||||||||||    
T  2334375 tgcttgtggttttgaagttttcactttgattaccagattagatctaggtgttgttattattg-ttgttgcttgtgtttactttgaaattggttactactt 2334277  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  2334276 tcctttgct 2334268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 5723313 - 5723106
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||         ||||||     
T  5723313 ttggagagatcaatctctcctctagagtaggttaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctattctctccttttatcttt 5723214  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||| |||||||||  ||||||||||| |||||||||||||| |||||||||||||||||||||||| | ||||||| |  |||||||||||    
T  5723213 tgcttgtggttt-gtgcttttctttttgattcctagattagatctaggtgttgttattgttgattattgtttgtgctcactttgatattggttactactt 5723115  T
Q  192 tcctttgct 200  Q
    | |||||||    
T  5723114 tactttgct 5723106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 723801 - 723597
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt-------tatcttgtg 93  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||       |||||| ||    
T  723801 ttggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtttctctcttctctctttatcttttg 723703  T
Q  94 cttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttc 193  Q
    |||||||||||| |||||||||||||||| ||| |||||||||||||| ||||||| ||| || ||| ||||||| ||||||| |  |||||||||||||    
T  723702 cttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattg-ttgttgattgtgttcactttgatattggttactactttc 723604  T
Q  194 ctttgct 200  Q
    |||||||    
T  723603 ctttgct 723597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 39284947 - 39285152
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctt---tgatgtgtttgt-----ttctctctttatcttgt 92  Q
    |||||||||||||||||||| ||| | ||||||||| |||||||||||||||| |||||||||   || |||||||||     ||||||||||||||| |    
T  39284947 ttggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaacaatctttaatggtgtgtttgtttctcttctctctttatctttt 39285045  T
Q  93 gcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactacttt 192  Q
    ||||||||||||| |||||||||||||||| ||| |||||||||||||| ||||||| ||| || ||| |||||||||||||||||  ||||||||||||    
T  39285046 gcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattg-ttgttgcttgtgtttactttgaaattggttactacttt 39285144  T
Q  193 cctttgct 200  Q
     |||||||    
T  39285145 tctttgct 39285152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 11067420 - 11067618
Alignment:
Q  5 agagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttct-----ctctttatcttgtgcttgtg 99  Q
    |||||||||||||||| ||| | ||||||||||| |||||||||| ||| ||||||||||| |||||||||||||     ||||||||||| ||||||||    
T  11067420 agagatcaatctctcccccagattaggtcaagtt-ggaccgaactcggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgtg 11067518  T
Q  100 gttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcctttgc 199  Q
    |||||| |||||||||||||||| ||| |||||||||||||| ||||||| ||| || ||| ||||||| ||||||| |  |||||||||||||||||||    
T  11067519 gttttgagcttttcactttgattactagattagatctaggtgttgttattattg-ttgttgcttgtgttcactttgatattggttactactttcctttgc 11067617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 34139827 - 34139623
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt-------tatcttgtg 93  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||       |||||| ||    
T  34139827 ttggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtttctctcttctctctttatcttttg 34139729  T
Q  94 cttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttc 193  Q
    |||||||||||| |||||||||||||||| ||| |||||||||||||  ||||||| ||| || ||| ||||||| ||||||| |  |||||||||||||    
T  34139728 cttgtggttttgagcttttcactttgattactagattagatctaggtcttgttattattg-ttgttgcttgtgttcactttgatattggttactactttc 34139630  T
Q  194 ctttgct 200  Q
    |||||||    
T  34139629 ctttgct 34139623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 4484387 - 4484178
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgttt---------ctctc--tttatct 89  Q
    |||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||| |||||||         |||||  |||||||    
T  4484387 ttggagagttcaatctctcctccagagtaggtcaagtttggacagaactgggtgaacaatctttggtgtctttgttttcttcttccctctccttttatct 4484288  T
Q  90 tgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactac 189  Q
    ||||||||||||||| |||||||||||||| |||||| |||||||||||||| |||||||||||||||||| |||   | ||||||  |  |||||||||    
T  4484287 tgtgcttgtggtttt-tgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcactcactttgttattggttactac 4484189  T
Q  190 tttcctttgct 200  Q
    |||||||||||    
T  4484188 tttcctttgct 4484178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 36318066 - 36317866
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgct 95  Q
    ||||||||||||||||||||   | ||||||||||||| |||||||||||||| ||||||||||| ||||||||||| |||     ||||||||| ||||    
T  36318066 ttggagagatcaatctctcccttagagtaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtttatcttctttctttatcttttgct 36317968  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||||| ||||||| |||  | ||| |||||||||||||||||  ||||||||||||| |    
T  36317967 tgtggttttgtgcttttcactttgattactagattaaatctaggtgttgttattattg-ctgttgcttgtgtttactttgaaattggttactactttcat 36317869  T
Q  196 ttg 198  Q
    |||    
T  36317868 ttg 36317866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 14633882 - 14633678
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-------ctttatcttgtg 93  Q
    |||||||||||||||||||| ||| | ||||||||||| ||||||||||| || ||||||||||| |||||||||||||||       ||||||||| ||    
T  14633882 ttggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgagtcaacaatctttggtgtgtttgtttctctattctctctttatcttttg 14633784  T
Q  94 cttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttc 193  Q
     ||||||||||| |||||||||||||||| ||| |||||||||||||| ||||||| ||| || ||| ||||||| ||||||| |  |||||||||||||    
T  14633783 attgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattg-ttgttgcttgtgttcactttgatattggttactactttc 14633685  T
Q  194 ctttgct 200  Q
    |||||||    
T  14633684 ctttgct 14633678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 29867980 - 29868186
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| || |||||||||||||||||||||||||||         |||||||    
T  29867980 ttggagagatcaatctctcccccaaattaggtcaagtt-ggaccgaactgggtcaataatctttgatgtgtttgtttctctcttctctccgtttatcttg 29868078  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||||| | |||||||||||||| ||| |||||||||||||| ||||||| ||| || ||| ||||||||||||| |||  | |||||||||    
T  29868079 tgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattg-ttgttgcttgtgtttactttaaaattgattactactt 29868177  T
Q  192 tcctttgct 200  Q
    | |||||||    
T  29868178 ttctttgct 29868186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 30833457 - 30833626
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgttt---------ctctc--tttatct 89  Q
    |||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||| |||||||         |||||  |||||||    
T  30833457 ttggagagttcaatctctcctccagagtaggtcaagtttggactgaactgggtgaacaatctttggtgtctttgttttcctcttccctctccttttatct 30833556  T
Q  90 tgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattg 160  Q
    |||||||||||||| ||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||    
T  30833557 tgtgcttgtggttt-gtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattg 30833626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 200
Target Start/End: Original strand, 32289678 - 32289886
Alignment:
Q  4 gagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaa--tctttgatgtgtttgttt---------ctctc--tttatctt 90  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||| |||  ||||||         |||||  ||||||||    
T  32289678 gagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtccttgttttcctcttccctctccttttatctt 32289777  T
Q  91 gtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactact 190  Q
    |||||||| ||||| |||||||||||||| |||||| |||||||||||||| |||||||||||||||||| |||     ||||||  || ||||||||||    
T  32289778 gtgcttgt-gttttatgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcacccactttgttagtggttactact 32289876  T
Q  191 ttcctttgct 200  Q
    ||||||||||    
T  32289877 ttcctttgct 32289886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 38 - 197
Target Start/End: Original strand, 2838102 - 2838260
Alignment:
Q  38 ttggaccgaactgggtgaacaatct-ttgatgtgtttgt-ttctctctttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatc 135  Q
    |||||||||||||||| |||||| | |||  |||||| | ||||| ||||||||| |||||||||||||| |||||||||||||||||||| |||| |||    
T  2838102 ttggaccgaactgggtcaacaatttcttg--gtgtttctcttctcactttatcttttgcttgtggttttgagcttttcactttgattcctagattatatc 2838199  T
Q  136 taggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttccttt 197  Q
    |||||| ||||||||||| || ||||||||||||||||||| || |||||||||||||||||    
T  2838200 taggtgttgttattgttg-ttgttgtttgtgtttactttgatagtggttactactttccttt 2838260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 4 - 200
Target Start/End: Complemental strand, 33162504 - 33162304
Alignment:
Q  4 gagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc-----tttatcttgtgcttgt 98  Q
    ||||||||||||||||| | | | ||||||||||| |||||||||| ||| ||||||||||| |||||||||||||||      |||||||| |||||||    
T  33162504 gagagatcaatctctcccctagattaggtcaagtt-ggaccgaactaggtcaacaatctttggtgtgtttgtttctcttctctatttatcttttgcttgt 33162406  T
Q  99 ggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttg-tgtttactttgaaagcggttactactttccttt 197  Q
    ||||||| |||||||||||||||| ||| |||||||||||||| ||||||| ||| || ||| ||| ||||| |||||| |  |||||||||||||||||    
T  33162405 ggttttgagcttttcactttgattactagattagatctaggtgttgttattattg-ttgttgcttgttgtttgctttgatattggttactactttccttt 33162307  T
Q  198 gct 200  Q
    |||    
T  33162306 gct 33162304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 11151648 - 11151470
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgct 95  Q
    ||||||||||||| |||||| ||| | ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||     ||||||||| || |    
T  11151648 ttggagagatcaacctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgtt 11151550  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttga 176  Q
    |||||||||| |||||||||||||||| ||| ||||||||||| || ||||||| ||| || ||| ||||||| |||||||    
T  11151549 tgtggttttgagcttttcactttgattactagattagatctagctgttgttattattg-ttgttgcttgtgttcactttga 11151470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 11690612 - 11690766
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgttt-gtttctct-----ctttatcttgtgc 94  Q
    ||||||||||||| |||||| ||||| || |||||||| |||||||||||| | ||||||||||| ||||||| ||||||||     ||||||||| |||    
T  11690612 ttggagagatcaacctctcccccatattacgtcaagtt-ggaccgaactggatcaacaatctttggtgtgttttgtttctcttctccctttatcttttgc 11690710  T
Q  95 ttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattg 150  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||| ||||||||    
T  11690711 ttgtggttttgagcttttcactttaattcctagattagatctaggtgttgttattg 11690766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 36773673 - 36773825
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgct 95  Q
    |||||||||||||||||||| ||| | || |||||||| |||||||||||||| ||||||||||| |||||||||||||||     ||||||||| ||||    
T  36773673 ttggagagatcaatctctcccccagattatgtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtttctcttctttctttatcttttgct 36773771  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttatt 149  Q
    |||||||||| |||||||  ||| ||| ||| |||||||||||||| |||||||    
T  36773772 tgtggttttgagcttttcttttttattactagattagatctaggtgttgttatt 36773825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 42362463 - 42362663
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttct-------ctctttatcttgtg 93  Q
    ||||||||||| |||||||| ||| | ||||||||||| |||||    ||||| ||||||||||| |||||||||||||       ||||||||||| ||    
T  42362463 ttggagagatctatctctcccccagattaggtcaagtt-ggacc----tgggtcaacaatctttggtgtgtttgtttctctcttctctctttatcttttg 42362557  T
Q  94 cttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttc 193  Q
    |||||||||||| | |||||||||||||| ||| |||||||||||||| ||||||| ||| || ||| ||| ||| |||||||    |||||||||||||    
T  42362558 cttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattg-ttgttgcttgagttcactttgattttggttactactttc 42362656  T
Q  194 ctttgct 200  Q
    |||||||    
T  42362657 ctttgct 42362663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 40 - 197
Target Start/End: Complemental strand, 14202440 - 14202277
Alignment:
Q  40 ggaccgaactgggtgaacaatctttgatgtgtttgttt-------ctctctttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattag 132  Q
    |||||||||||||| ||||||||||| |||||||||||       ||||||||||||| |||||||||||||  |||||||||||||||| ||| |||||    
T  14202440 ggaccgaactgggtcaacaatctttggtgtgtttgtttatctcttctctctttatcttttgcttgtggttttaagcttttcactttgattactagattag 14202341  T
Q  133 atctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttccttt 197  Q
    ||||||||| ||||||| ||| || ||| ||| ||| ||||||| |  | |||||||||||||||    
T  14202340 atctaggtgttgttattattg-ttgttgcttgcgttcactttgatattgattactactttccttt 14202277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 38 - 152
Target Start/End: Original strand, 1345613 - 1345733
Alignment:
Q  38 ttggaccgaactgggtgaacaatct-ttgatgtgtttgtttctct-----ctttatcttgtgcttgtggttttgtgcttttcactttgattcctaaatta 131  Q
    |||||||||||||||| |||||| | ||| |||||||||||||||     ||||||||| || ||||||||||| |||||||||||||||||||| ||||    
T  1345613 ttggaccgaactgggtcaacaatttcttggtgtgtttgtttctcttctcactttatcttatgattgtggttttgagcttttcactttgattcctagatta 1345712  T
Q  132 gatctaggtgctgttattgtt 152  Q
    |||||||||| ||||||||||    
T  1345713 gatctaggtgttgttattgtt 1345733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 76 - 202
Target Start/End: Original strand, 24885780 - 24885905
Alignment:
Q  76 ttctctctttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttg 175  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||  ||| || ||  ||||||| ||||||    
T  24885780 ttctccctttatcttttgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttatcattg-ttgtttcttgtgttcactttg 24885878  T
Q  176 aaagcggttactactttcctttgctac 202  Q
    | |  |||||||| |||||||||||||    
T  24885879 atattggttactattttcctttgctac 24885905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 11049671 - 11049808
Alignment:
Q  7 agatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca-atctttgatgtgtttgt-----ttctctctttatcttgtgcttgtgg 100  Q
    ||||||||||||||| |||| ||||||||  |||||| ||||||||| ||||  |||||| |||||||||     |||||||||||| || |||||||||    
T  11049671 agatcaatctctccttcataataggtcaa-attggactgaactgggtaaacatttctttg-tgtgtttgtttctcttctctctttatattttgcttgtgg 11049768  T
Q  101 ttttgtgcttttcactttgattcctaaattagatctaggt 140  Q
    |||||| ||||||||||||||||||| |||||||||||||    
T  11049769 ttttgtacttttcactttgattcctagattagatctaggt 11049808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6266802 - 6266863
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6266802 ttggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 6266863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12647443 - 12647382
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12647443 ttggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 12647382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13656089 - 13656028
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  13656089 ttggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatct 13656028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 45727040 - 45727096
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  45727040 ttggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaaca 45727096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 26353295 - 26353488
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt-----tatcttgtgct 95  Q
    |||||||||||| |||||||   | ||||||||||||| ||||||||| |||| |||| | |||| |||||||||||||||| |     |||||| ||||    
T  26353295 ttggagagatcactctctcccttagagtaggtcaagtt-ggaccgaaccgggtaaacattttttg-tgtgtttgtttctctcctctccttatcttttgct 26353392  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    |||||||||||| ||||||||||||||     |||||||||| ||  |||||||||||    ||  ||||| ||||||| | |  |||||||||||||||    
T  26353393 tgtggttttgtgtttttcactttgatt-----attagatctaagttttgttattgttg----ttccttgtgattactttaatattggttactactttcct 26353483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 200
Target Start/End: Complemental strand, 12123560 - 12123442
Alignment:
Q  79 tctctttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaa 178  Q
    |||||||||||| |||||||| ||||||  ||||||||| |||| ||| ||||||| |||||  ||||||||||| || ||||||| | ||||||||| |    
T  12123560 tctctttatcttttgcttgtgattttgtatttttcactt-gatttctagattagatataggtt-tgttattgttg-ttgttgtttgaggttactttgata 12123464  T
Q  179 gcggttactactttcctttgct 200  Q
      ||||||||||||||||||||    
T  12123463 ttggttactactttcctttgct 12123442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 35446941 - 35446885
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||    
T  35446941 ttggagagatcactctctcctccagagtaggtcaag-ttggaccgaactgggtgaaca 35446885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 24398169 - 24398228
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaat 60  Q
    |||||||||||||||||||| |||||||||||||   |||||||||||||| ||||||||    
T  24398169 ttggagagatcaatctctcccccatagtaggtcattgttggaccgaactggctgaacaat 24398228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 33648283 - 33648340
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| |||||||||   |||||||||||||||| ||||    
T  33648283 ttggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtaaaca 33648340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17450689 - 17450751
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttg 65  Q
    |||||||||||||||||||| | | ||||||||||||| |||||||||| |||||||||||||||    
T  17450689 ttggagagatcaatctctccac-agagtaggtcaagtt-ggaccgaactaggtgaacaatctttg 17450751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1631789 - 1631735
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaa 56  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||||||| |||||    
T  1631789 ttggagaaatcaatctctcctccagagtaggtcaag-ttggaccgaactgagtgaa 1631735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 28672042 - 28672163
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca-atctttgatgtgtttgt-----ttctctctttatcttgtgc 94  Q
    |||||||||||||||||||||||| |||||||||   |||||||||| | ||| || | ||||||| |||||||||     ||||||||||||| | |||    
T  28672042 ttggagagatcaatctctcctccagagtaggtcattgttggaccgaattaggtaaatatatctttg-tgtgtttgtttctcttctctctttatcctttgc 28672140  T
Q  95 ttgtggttttgtgcttttcactt 117  Q
    ||||| ||||||| ||| |||||    
T  28672141 ttgtgattttgtgttttacactt 28672163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 13121956 - 13122031
Alignment:
Q  76 ttctctctttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttg 153  Q
    ||||||||||||||| ||||||||||||| || ||||||| |||||| ||| |||| ||||||||  |||||||||||    
T  13121956 ttctctctttatcttttgcttgtggttttatgtttttcac-ttgatttctagattacatctaggt-ttgttattgttg 13122031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 17490201 - 17490097
Alignment:
Q  5 agagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgttt-----ctctctttatcttgtgcttgtg 99  Q
    |||||||||||||||| | | |||||||||| ||||||||||||||||| |||| |  || || |||||||||     ||||||||||| | ||||||||    
T  17490201 agagatcaatctctcccctagagtaggtcaa-tttggaccgaactgggtaaacatttcttaatatgtttgtttctcttctctctttatcatttgcttgtg 17490103  T
Q  100 gttttg 105  Q
    ||||||    
T  17490102 gttttg 17490097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 7451233 - 7451284
Alignment:
Q  5 agagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||| | ||||||||||| ||||| |||||||||||||||    
T  7451233 agagatcaatctctcctctacagtaggtcaag-ttgga-cgaactgggtgaaca 7451284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 42288167 - 42288117
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggt 53  Q
    |||||||||||||||||||| ||| | ||||||||| ||||||||||||||||    
T  42288167 ttggagagatcaatctctcc-ccagattaggtcaag-ttggaccgaactgggt 42288117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 137; Significance: 1e-71; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 7762376 - 7762584
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||         ||||||     
T  7762376 ttggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctatgatgtgtttgtttctctcttctctccttttatcttt 7762475  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||| ||||||| |  |||||||||||    
T  7762476 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgttgttattgttgattattacttgtgttcactttgatattggttactactt 7762575  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  7762576 tcctttgct 7762584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 9581393 - 9581601
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||| |||    
T  9581393 ttggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctcttctctccctttattttg 9581492  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||| | ||||||| |  |||||||||||    
T  9581493 tgcttgtggttttgtgcttttcactttgattcatagattagatctaggtgctgttattgttgattattgcttgtgctcactttgatattggttactactt 9581592  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  9581593 tcctttgct 9581601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 19683946 - 19683738
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||         ||||||     
T  19683946 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttt 19683847  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| |  |||||||||||    
T  19683846 tgcttgtggttttgtgtttttcacttttattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactt 19683747  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  19683746 tcctttgct 19683738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 37408573 - 37408777
Alignment:
Q  5 agagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttgtgct 95  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||         |||||| ||||    
T  37408573 agagatcaatctctcctccagagtaggtcaagtttggatcgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttttgct 37408672  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||| | |  |||||||||||||||    
T  37408673 tgtgatttagtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgtttgtgctcactttaatattggttactactttcct 37408772  T
Q  196 ttgct 200  Q
    |||||    
T  37408773 ttgct 37408777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 7764575 - 7764780
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||| ||||||||||||| |||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||         ||||||     
T  7764575 ttggagagatgaatctctcctccagagtaggtcaaatttagaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttt 7764674  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    || |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||| ||||||| |  |||||||||||    
T  7764675 tgtttgtggttttgtgcttttcactttgattccaagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactt 7764774  T
Q  192 tccttt 197  Q
    ||||||    
T  7764775 tccttt 7764780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 9636183 - 9635974
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct-ttgatgtgtttgtttctctct----------ttatct 89  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||          ||||||    
T  9636183 ttggagagttcaatctctcctccaaagtaggtcaagtttgaaccgaactgggtgaacaatctcttggtgtgtttgtttctctctgctctcccttttatct 9636084  T
Q  90 tgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactac 189  Q
    |||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| |  |||||||||    
T  9636083 tgtgcttgtgattta-tgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactac 9635985  T
Q  190 tttcctttgct 200  Q
    |||||||||||    
T  9635984 tttcctttgct 9635974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 40735494 - 40735700
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt--------tatcttgt 92  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| | ||||||||| ||| |||||| |||||||        |||||| |    
T  40735494 ttggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcagcaatctttggtgtatttgttcctctcttctctcctttatctttt 40735592  T
Q  93 gcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactacttt 192  Q
    |||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |  ||||||||||||    
T  40735593 gcttgtggatttgtgcttttcactttggttcctatattagatctaggtgctgttattgttgattattgtttgtgttcactttgatattggttactacttt 40735692  T
Q  193 cctttgct 200  Q
    ||||||||    
T  40735693 cctttgct 40735700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 5258201 - 5257994
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||| ||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||         ||| ||     
T  5258201 ttggagagttcaatctcttctccagagtaggtcaagtttggaccgaacttggtgaacaatctttggtgtgtttgtttctctcttctctccttttatattt 5258102  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||  || ||||||  |  |||||||||||    
T  5258101 tgcttgtggttt-gtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgttattggttactactt 5258003  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  5258002 tcctttgct 5257994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 5260380 - 5260173
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    |||||||| ||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||         ||||| ||     
T  5260380 ttggagagttcaatctcttctccaaagtaggtcaagtttggaccgaacttggtgaacaatctttggtgtgtttgtttctctcttctctccttttatattt 5260281  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||   | ||||||  |  |||||||||||    
T  5260280 tgcttgtgg-tttgtgcttttcactttgattcctaaattagatctaggtgttgttattgttgattattgcttgcactcactttgttattggttactactt 5260182  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  5260181 tcctttgct 5260173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 29810979 - 29811186
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtt---------tctctctttatcttg 91  Q
    |||||||||||||||||||| ||| | |||||||||||   |||||| ||||| ||||||||||| ||||||||||         |||| |||||||||     
T  29810979 ttggagagatcaatctctcccccagattaggtcaagttaa-accgaattgggtcaacaatctttggtgtgtttgttcatctcttctctccctttatcttt 29811077  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||  ||||||||  |||||||||||    
T  29811078 tgcttgtggttttgagcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttctctttgaaattggttactactt 29811177  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  29811178 tcctttgct 29811186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 29813174 - 29813379
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt-------tatcttgtg 93  Q
    |||||||||||||||||||| ||| | | ||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||       |||||| ||    
T  29813174 ttggagagatcaatctctcccccagatttggtcatgtt-ggaccgaactgggtcaacaatctttgatgtgtttgttcctctcttctccctttatcttttg 29813272  T
Q  94 cttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttc 193  Q
     ||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| |   |||||||||||     
T  29813273 gttgtggttttgagcttttcactttgattcttagattagatctaggtgctgttattgttgattattgtttgtgttcactttgatattagttactactttt 29813372  T
Q  194 ctttgct 200  Q
    |||||||    
T  29813373 ctttgct 29813379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 40734609 - 40734815
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt--------tatcttgt 92  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| |||||||||||  ||||||||| |||||||        |||||| |    
T  40734609 ttggagagatcaatctctcccccaaattaggtcaagtt-ggaccgaactgggtcaacaatctttggagtgtttgttcctctcttctctcctttatctttt 40734707  T
Q  93 gcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactacttt 192  Q
    |||||||| |||||||||| |||||||||||||| |||||||||||||||||||||| || ||||||  ||||||| ||||||| |  ||||||||||||    
T  40734708 gcttgtggatttgtgctttgcactttgattcctagattagatctaggtgctgttattttttattatttcttgtgttcactttgatattggttactacttt 40734807  T
Q  193 cctttgct 200  Q
    ||||||||    
T  40734808 cctttgct 40734815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 22835059 - 22834857
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttg-tttctct-----ctttatcttgtgc 94  Q
    |||||||||||||||||||| ||||| ||||||||||| |||||||||||| | |||||| |||| |||||||  |||||||     ||||||||| |||    
T  22835059 ttggagagatcaatctctccgccatattaggtcaagtt-ggaccgaactgg-tcaacaatatttggtgtgttttctttctcttcttcctttatcttttgc 22834962  T
Q  95 ttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcc 194  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||   |||||||||||||| |  ||||||||||||||    
T  22834961 ttgtggttttgtgcttttcactttgattcctagattagatctaggtgttgttattgttg-ttattacctgtgtttactttgatattggttactactttcc 22834863  T
Q  195 tttgct 200  Q
    ||||||    
T  22834862 tttgct 22834857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 760958 - 761162
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttct-------ctctttatcttgtg 93  Q
    |||||||||||||||||||| ||| | ||||||||||| |||| ||| ||||| ||||||||||| |||||||||||||       ||||||||||| ||    
T  760958 ttggagagatcaatctctcccccagattaggtcaagtt-ggactgaaatgggttaacaatctttggtgtgtttgtttctctcttctctctttatcttttg 761056  T
Q  94 cttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttc 193  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||| |||||| ||| ||| |||||||    |||||||||||||    
T  761057 cttgtggttttgagcttttcactttgattcctagattagatctaggtgctgctattgttg-ttattgcttgagttcactttgattttggttactactttc 761155  T
Q  194 ctttgct 200  Q
    |||||||    
T  761156 ctttgct 761162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 45095274 - 45095481
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct---------ctttatcttg 91  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||  || |||||||||||          ||||||||     
T  45095274 ttggagagatcaatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatctttggcgtatttgtttctctattctctccttttatcttt 45095373  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||| |||||| ||| | ||||||||| || |||||||||| |||||||||||||||||||||| ||||| | ||||||| |  |||||||||||    
T  45095374 tgcttgtgg-tttgtgttttactctttgattcatagattagatctatgtgctgttattgttgattattgcttgtgctcactttgatattggttactactt 45095472  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  45095473 tcctttgct 45095481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 29196443 - 29196240
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgct 95  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||     ||||||||| ||||    
T  29196443 ttggagagatcaatctctcccccaaattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgct 29196345  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttg-tgtttactttgaaagcggttactactttcc 194  Q
    |||||||||| |||||||||||||||| | | |||||||||||||| ||||||| ||| || ||| ||| ||||| |||||| |  ||||||||||||||    
T  29196344 tgtggttttgagcttttcactttgattaccagattagatctaggtgttgttattattg-ttgttgcttgttgtttgctttgatattggttactactttcc 29196246  T
Q  195 tttgct 200  Q
    ||||||    
T  29196245 tttgct 29196240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 39153418 - 39153215
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgttt-gtttctct-----ctttatcttgtgc 94  Q
    ||||||||| |||||||||| ||| | ||||||||||| |||| ||||||||| ||||||||||| ||||||| ||||||||     |||||||||||||    
T  39153418 ttggagagaacaatctctcccccagattaggtcaagtt-ggactgaactgggtcaacaatctttgttgtgttttgtttctcttctccctttatcttgtgc 39153320  T
Q  95 ttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcc 194  Q
    ||||||||||| |||||||||||||||| ||| |||||||||||||| ||||||| |||  |   | |||||||||||||||||  ||||||||||||||    
T  39153319 ttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattg-ctgccgcttgtgtttactttgaaattggttactactttcc 39153221  T
Q  195 tttgct 200  Q
    ||||||    
T  39153220 tttgct 39153215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 195
Target Start/End: Complemental strand, 5236510 - 5236312
Alignment:
Q  4 gagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttgtgc 94  Q
    ||||||||||||| ||| ||| | |||||||| |||||||| |||||||| ||||||||||| |||||||||| |||||||         |||||| |||    
T  5236510 gagagatcaatctttcc-ccagattaggtcaa-tttggaccaaactgggtcaacaatctttggtgtgtttgttcctctcttctctccttttatcttttgc 5236413  T
Q  95 ttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcc 194  Q
    |||||| ||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||| ||||||| ||||||| | || ||||||||||||    
T  5236412 ttgtggatttgtgcttttcactttgattcctagattagatctaggagctcttattgttgattattgcttgtgttcactttgatatcgattactactttcc 5236313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 51398925 - 51399132
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    ||||||||||  |||||||| ||| | ||||||||||| |||||||||| ||| ||||||||||| |||||||||| |||||||         ||||||     
T  51398925 ttggagagatttatctctcccccagattaggtcaagtt-ggaccgaacttggtcaacaatctttggtgtgtttgttcctctcttctctccctttatcttt 51399023  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||| | ||||||| |  | || ||||||    
T  51399024 tgcttgtggttttgtacttttcactttgattcctagattagatctaggtgctgttattgttgattattgctagtgctcactttgatattgttttctactt 51399123  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  51399124 tcctttgct 51399132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 31314556 - 31314758
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttct-----ctctttatcttgtgct 95  Q
    |||||||||||||| ||||| ||||| ||||||||||| ||||||||||| || ||||||||||| |||||||||||||     ||||||||||| ||||    
T  31314556 ttggagagatcaatatctcccccatattaggtcaagtt-ggaccgaactgagtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgct 31314654  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    |||||||||| |||||||||||||||| ||| |||| || |||||| ||||||| ||| || ||| ||||||||||||| | |   |||| |||||||||    
T  31314655 tgtggttttgagcttttcactttgattactagattatatttaggtgttgttattattg-ttgttgcttgtgtttactttaatattagttattactttcct 31314753  T
Q  196 ttgct 200  Q
    |||||    
T  31314754 ttgct 31314758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 44700535 - 44700334
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgct 95  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||| ||| ||||||||||  |||||||||||||||     ||||||| | ||||    
T  44700535 ttggagagatcaatctctcc-ccacattaggtcaagtt-ggaccgaactaggtcaacaatctttcgtgtgtttgtttctcttctctctttatcctttgct 44700438  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    |||||||||| | |||||||||||||| ||| |||||||||||||| ||||||| ||| || ||| ||||||||||||||| |  |||||||||||| ||    
T  44700437 tgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattg-ttgttgcttgtgtttactttgatattggttactacttttct 44700339  T
Q  196 ttgct 200  Q
    |||||    
T  44700338 ttgct 44700334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 23200195 - 23199987
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgttt---------ctctc--tttatct 89  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||         |||||  |||||||    
T  23200195 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtctttgttttcttcttccctctccttttatct 23200096  T
Q  90 tgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactac 189  Q
    | ||||||||| |||||| |||||| |||| |||||| |||||||||||||| | |||||||||||||||| |||   | ||||||  |  |||||||||    
T  23200095 tatgcttgtgg-tttgtgtttttcattttgtttcctagattagatctaggtg-ttttattgttgattattgcttgcactcactttgttattggttactac 23199998  T
Q  190 tttcctttgct 200  Q
    |||||||||||    
T  23199997 tttcctttgct 23199987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 16499140 - 16499292
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgt-----ttctctctttatcttgtgct 95  Q
    |||||||||||||||||||| ||| ||||||| ||||| |||||||||||||| ||||||||||| ||| |||||     ||||||||||||||| ||||    
T  16499140 ttggagagatcaatctctcccccagagtaggttaagtt-ggaccgaactgggtcaacaatctttggtgtatttgtttctcttctctctttatcttttgct 16499238  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattg 150  Q
    ||||||||||| ||||||| ||||||||||| ||||||| |||||| ||||||||    
T  16499239 tgtggttttgtacttttca-tttgattcctagattagatttaggtgttgttattg 16499292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 197
Target Start/End: Complemental strand, 23391962 - 23391766
Alignment:
Q  5 agagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgttt-----ctctctttatcttgtgcttgtg 99  Q
    |||||| ||||||||| ||| | ||||||||||| |||||||||||||| ||||||||||| |||||||||||     ||||||||||||| ||||||||    
T  23391962 agagataaatctctcccccaaattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgtg 23391864  T
Q  100 gttttgtg-cttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttccttt 197  Q
    ||||||||  |||||||||||||| ||| |||||||||||||| ||||||| ||| || ||  ||||||| ||||||| |  ||||| |||||||||||    
T  23391863 gttttgtgttttttcactttgattactagattagatctaggtgttgttattattg-ttgtttcttgtgttcactttgatattggttattactttccttt 23391766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 83 - 200
Target Start/End: Complemental strand, 9634787 - 9634671
Alignment:
Q  83 tttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcgg 182  Q
    ||||||||||||||||| | |  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| |  ||    
T  9634787 tttatcttgtgcttgtgatcta-tgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattgg 9634689  T
Q  183 ttactactttcctttgct 200  Q
    ||||||||||||||||||    
T  9634688 ttactactttcctttgct 9634671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 9666523 - 9666371
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgct 95  Q
    ||||||||||  |||||||| ||| | ||||| ||||| |||||||||||||| ||||||||||| |||||||||||||||     ||||||||| ||||    
T  9666523 ttggagagattgatctctcccccagattaggtaaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtttctcttatctctttatcttttgct 9666425  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttatt 149  Q
    |||||||||| |||||||||||||||| ||| |||||||||||||| |||||||    
T  9666424 tgtggttttgagcttttcactttgattactagattagatctaggtgttgttatt 9666371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 29682470 - 29682674
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt-------tatcttgtg 93  Q
    |||||||||||||||||||| | | | ||| ||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||       |||||| ||    
T  29682470 ttggagagatcaatctctcccctagattagatcaagtt-ggaccgaactgggtcaacaatctttggtgtgtatgtttctctcttctccctttatcttttg 29682568  T
Q  94 cttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttc 193  Q
    |||||||||||| | ||||||||||||||||||  |||||||||||||||| |||||||| |||||| |||| || ||||| |    | |||||||||||    
T  29682569 cttgtggttttgagtttttcactttgattcctaggttagatctaggtgctgctattgttg-ttattgcttgtattcactttaattttgattactactttc 29682667  T
Q  194 ctttgct 200  Q
    |||||||    
T  29682668 ctttgct 29682674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 23197996 - 23197828
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgt-------ttctctc----tttatct 89  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||       |||||||    |||||||    
T  23197996 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtctttgttttcctcttctctctccttttatct 23197897  T
Q  90 tgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattg 160  Q
    ||||||||||| |||||| |||||| |||| |||||| |||||||||| ||| | ||||||||||||||||    
T  23197896 tgtgcttgtgg-tttgtgtttttcattttgtttcctagattagatctatgtg-ttttattgttgattattg 23197828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 76 - 200
Target Start/End: Complemental strand, 21350981 - 21350861
Alignment:
Q  76 ttctctctttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttg 175  Q
    ||||| ||||||||| ||||||||||| || |||||||||||||||||||| |||||||||| ||| |||||||||||    ||||||||||||||||||    
T  21350981 ttctcactttatcttatgcttgtggttatgagcttttcactttgattcctagattagatctaagtgttgttattgttg----ttgtttgtgtttactttg 21350886  T
Q  176 aaagcggttactactttcctttgct 200  Q
    | |  ||||||||||||||||||||    
T  21350885 atattggttactactttcctttgct 21350861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 34491323 - 34491397
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtt 76  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  34491323 ttggagagatcaatctctcctccagagtaggtcaagtt-ggaccgaactgggtgaacaatctttggtgtgtttgtt 34491397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 23410386 - 23410184
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgttt-----ctctctttatcttgtgct 95  Q
    |||||||||| ||||||||| ||| | ||||||||||| ||| |||| ||||| ||||||||||| |||||||||||     ||||||||||||| ||||    
T  23410386 ttggagagataaatctctcccccaaattaggtcaagtt-ggaacgaattgggtcaacaatctttggtgtgtttgtttatattctctctttatcttttgct 23410288  T
Q  96 tgtggtttt--gtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttc 193  Q
    |||||||||  ||  |||| ||||||||| ||| |||||||||||||| ||||| | ||  || ||| ||||||| ||||||| |   ||||||||||||    
T  23410287 tgtggttttgagttttttttactttgattactagattagatctaggtgttgttaatatt-tttgttgcttgtgttcactttgatatatgttactactttc 23410189  T
Q  194 ctttg 198  Q
    |||||    
T  23410188 ctttg 23410184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 27305767 - 27305567
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaat-ctttgatgtgtttgtttctctc-----tttatcttgtgc 94  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||| ||  ||| | ||||| |||||||||||||||      |||||||| ||     
T  27305767 ttggagagatcaatctctcctccaaagtaggtcaa-tttggaccgaactgtgtatacatttctttg-tgtgtttgtttctcttctctatttatcttttgt 27305670  T
Q  95 ttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcc 194  Q
    ||||||||||||| |||||||||| | ||||| |||||||||||||   |||||||||| || ||| ||||  ||||||||| |  ||||||||||||||    
T  27305669 ttgtggttttgtgtttttcacttt-actcctagattagatctaggt-tggttattgttg-ttgttgcttgttgttactttgatattggttactactttcc 27305573  T
Q  195 tttgct 200  Q
    ||||||    
T  27305572 tttgct 27305567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 7780061 - 7779891
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct-ttgatgtgtttgttt---------ctctc--tttatc 88  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| || |||||||||||||| ||| ||| |||||||         |||||  ||||||    
T  7780061 ttggagagttcaatctctcctccagagtaggtcaagtttggaccaaagtgggtgaacaatctcttggtgtctttgttttcctcttccctctccttttatc 7779962  T
Q  89 ttgtgcttgtggttttgtg-cttttcactttgattcctaaattagatctaggtgctgttattgttgattattg 160  Q
    |||||||||| || |||||  ||||||| ||| |||||| ||||||||||||||||||| |||||||||||||    
T  7779961 ttgtgcttgt-gtattgtgttttttcac-ttgtttcctagattagatctaggtgctgtttttgttgattattg 7779891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 32744489 - 32744349
Alignment:
Q  5 agagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttc-----tctctttatcttgtgcttgtg 99  Q
    |||||| ||||| ||| ||| | ||||||||||| |||||||||||||| ||||||||||| ||||||||||||     |||||||||||| ||||||||    
T  32744489 agagataaatctatcccccagattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtttctcatatctctttatcttttgcttgtg 32744391  T
Q  100 gttttgtgcttttcactttgattcctaaattagatctaggtgctgttat 148  Q
    ||       |||||||||||||| ||| |||||||||||||| ||||||    
T  32744390 gt-------ttttcactttgatttctagattagatctaggtgttgttat 32744349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 32891215 - 32891364
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgct 95  Q
    |||||||||| ||||||||| ||  ||||||||| ||| |||||||||||| | | || |  ||| |||||||||||||||     | ||||||| ||||    
T  32891215 ttggagagataaatctctcccccggagtaggtcatgtt-ggaccgaactggataatcatttcttggtgtgtttgtttctcttctctccttatcttttgct 32891313  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgtt 146  Q
    |||||||||| | |||||||||||||||||| |||||||||||||| ||||    
T  32891314 tgtggttttgagtttttcactttgattcctatattagatctaggtgttgtt 32891364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 801203 - 801264
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  801203 ttggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 801264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3617561 - 3617622
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3617561 ttggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 3617622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 53921560 - 53921422
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgt-----ttctctctttatcttgtgct 95  Q
    |||||||||||||||||||| ||  ||||| |||||||| ||||||||||| | |||| |  ||  |||||||||     |||||||||||| || || |    
T  53921560 ttggagagatcaatctctcccccggagtagatcaagttt-gaccgaactggataaacatttcttagtgtgtttgtttctcttctctctttatattttgtt 53921462  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatc 135  Q
    |||||||||| |||||||||||||||||||| ||||||||    
T  53921461 tgtggttttgagcttttcactttgattcctagattagatc 53921422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 200
Target Start/End: Complemental strand, 2075129 - 2074932
Alignment:
Q  4 gagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgcttgt 98  Q
    ||||||||||||||||| | | ||||||||||||| ||| |||||||||| |||| |  | | ||||||| |||||||     ||||||||| |||||||    
T  2075129 gagagatcaatctctccccgagagtaggtcaagtt-ggatcgaactgggtaaacatttctgggtgtgtttatttctcttctctctttatcttttgcttgt 2075031  T
Q  99 ggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcctttg 198  Q
    ||||||||| ||||||| ||| |||||| |||| |||| |||  | |||||||| ||| ||| ||||| ||| ||||| |  ||||||||||||||||||    
T  2075030 ggttttgtgtttttcac-ttgtttcctagattaaatctgggt-ttattattgtt-attgttgcttgtggttattttgatattggttactactttcctttg 2074934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6716610 - 6716671
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  6716610 ttggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 6716671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25637538 - 25637599
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  25637538 ttggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatct 25637599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43403801 - 43403740
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    |||||||||| ||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  43403801 ttggagagattaatctctcctccagagtaggtcatggttggaccgaactgggtgaacaatct 43403740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 45283097 - 45283158
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  45283097 ttggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgagtgaacaatct 45283158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 54635235 - 54635296
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  54635235 ttggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 54635296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 76 - 200
Target Start/End: Complemental strand, 51352111 - 51351990
Alignment:
Q  76 ttctctctttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttg 175  Q
    ||||||||||||||| | |||||||||||||| |||||| ||||||||||| |||||||||||||  |||||||||||  |  || ||||| ||||||||    
T  51352111 ttctctctttatcttttacttgtggttttgtgtttttca-tttgattcctagattagatctaggt-ttgttattgttg-ctgctgcttgtgattactttg 51352015  T
Q  176 aaagcggttactactttcctttgct 200  Q
    | |  |||||| |||||||||||||    
T  51352014 atattggttaccactttcctttgct 51351990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4570063 - 4570120
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||| ||||| ||||||| |||||||||||||||||||| ||||    
T  4570063 ttggagagatcaatctctactccagagtaggtgaagtttggaccgaactgggtcaaca 4570120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4598580 - 4598519
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  4598580 ttggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatct 4598519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6095656 - 6095600
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||    
T  6095656 ttggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgtgtgaaca 6095600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10056330 - 10056391
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  10056330 ttggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatct 10056391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10058552 - 10058613
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  10058552 ttggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatct 10058613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10060774 - 10060835
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  10060774 ttggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatct 10060835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10062996 - 10063057
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  10062996 ttggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatct 10063057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10065218 - 10065279
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  10065218 ttggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatct 10065279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10211506 - 10211567
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  10211506 ttggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatct 10211567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43401858 - 43401797
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||| || ||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  43401858 ttggagaaattaatctctcctccagagtaggtcatggttggaccgaactgggtgaacaatct 43401797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 49199526 - 49199465
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    |||||||||| ||||||||||||| | ||||||| | |||||||||||||||||||||||||    
T  49199526 ttggagagattaatctctcctccagactaggtcatggttggaccgaactgggtgaacaatct 49199465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 55302029 - 55301972
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||    
T  55302029 ttggagagatcaatctctcctccatagtaggtcattgttggaccgaacttggtgaaca 55301972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 44331656 - 44331717
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctt 63  Q
    |||||||||||||||||||| ||| | ||||||||| |||||||||||||||| |||||||||    
T  44331656 ttggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaacaatctt 44331717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4600801 - 4600740
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||| | |||||||||||||||||||||||||||||| ||||||    
T  4600801 ttggagagtacaaactctcctctagagtaggtcaagtttggaccgaactgggtgaccaatct 4600740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10209286 - 10209347
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| ||||||||||||||||||| |||||||||| ||||||    
T  10209286 ttggagagtacaaactctcctccagagtaggtcaagtttggaccaaactgggtgaccaatct 10209347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40913404 - 40913464
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    |||||||||||||||||||| ||| | ||||||||| |||||||||||||||| ||||||||    
T  40913404 ttggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaacaatct 40913464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 54593815 - 54593871
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| |||| |||||| ||||||| |||||||||||||    
T  54593815 ttggagagatcaatctctcctccagagtatgtcaag-ttggaccaaactgggtgaaca 54593871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 10067435 - 10067478
Alignment:
Q  19 cctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    |||||| |||||||||||||||||||||||||||||| ||||||    
T  10067435 cctccagagtaggtcaagtttggaccgaactgggtgaccaatct 10067478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 5433939 - 5433906
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtca 34  Q
    ||||||||||||||||||||||||||||||||||    
T  5433939 ttggagagatcaatctctcctccatagtaggtca 5433906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 41819580 - 41819523
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    ||||||| |||||||||||||||| |||||||||   ||||||| |||||||||||||    
T  41819580 ttggagacatcaatctctcctccagagtaggtcattgttggaccaaactgggtgaaca 41819523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 30236236 - 30236294
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaat 60  Q
    |||||||||||||||||||| ||| | ||||||||| |||||||||||| ||| ||||||    
T  30236236 ttggagagatcaatctctcccccagattaggtcaag-ttggaccgaactaggtcaacaat 30236294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 47304362 - 47304420
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaat 60  Q
    |||||||||||||||||||| | | | |||||||||||| ||||||||||||| ||||||    
T  47304362 ttggagagatcaatctctccccaagattaggtcaagttt-gaccgaactgggtcaacaat 47304420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 46860585 - 46860642
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||| ||||||| |||||||||   |||||||||| ||| ||||||    
T  46860585 ttggagagatcaatctttcctccagagtaggtcattgttggaccgaattggatgaaca 46860642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 46173468 - 46173515
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaact 49  Q
    |||||||||||||||||||| ||| | ||||||||| ||||||||||||    
T  46173468 ttggagagatcaatctctcccccagattaggtcaag-ttggaccgaact 46173515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 129; Significance: 6e-67; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 23555151 - 23555359
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||     
T  23555151 ttggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctcttctctccttttatcttt 23555250  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||| ||||| |||| ||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||||||| |  |||||||||||    
T  23555251 tgcttgtggtattgtgttttttactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactt 23555350  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  23555351 tcctttgct 23555359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 4 - 200
Target Start/End: Original strand, 25615967 - 25616173
Alignment:
Q  4 gagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttct----------ctctttatcttgtg 93  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||          ||||||||||||||    
T  25615967 gagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggcgaacaatctttggtgtgtttgtttctctcttcttctctctttatcttgtg 25616066  T
Q  94 cttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttc 193  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||| ||||||| ||||||| |  |||||||||||||    
T  25616067 cttgtggttttgtgcttttcacttcgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttc 25616166  T
Q  194 ctttgct 200  Q
    |||||||    
T  25616167 ctttgct 25616173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 35854025 - 35854234
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct-ttgatgtgtttgtttctctctt----------tatct 89  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||          |||||    
T  35854025 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtgtttgtttctctcttctctcccttttatct 35854124  T
Q  90 tgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactac 189  Q
    |||||||||| |||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |  |||||||||    
T  35854125 tgtgcttgtg-ttttatgcttttcactttgcttcctagattagatctaggtgctgttattgttgattattgtttgtgttcactttgatattggttactac 35854223  T
Q  190 tttcctttgct 200  Q
    |||||||||||    
T  35854224 tttcctttgct 35854234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 29991164 - 29991371
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         ||||||||     
T  29991164 ttggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttt 29991263  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||| |||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||  ||||| | ||||||| |  |||||||||||    
T  29991264 tgcttgtgg-tttgtgcttttctctttgattcctatattagatctaggtgttgttattgttgattattacttgtgctcactttgatattggttactactt 29991362  T
Q  192 tcctttgct 200  Q
    | |||||||    
T  29991363 ttctttgct 29991371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 27347932 - 27348135
Alignment:
Q  5 agagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttgtgct 95  Q
    |||||||||||||||| ||| | ||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||||         |||||| ||||    
T  27347932 agagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgttcctctcttctctcactttatcttttgct 27348030  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |  |||| ||||||||||    
T  27348031 tgtggttttgtgtttttcactttgattcctagattagatctaggtgctgttattgttgattattgtttgtgttcactttgatattggttgctactttcct 27348130  T
Q  196 ttgct 200  Q
    |||||    
T  27348131 ttgct 27348135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 41649068 - 41648864
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt-------tatcttgtg 93  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||       |||||| ||    
T  41649068 ttggagagatcaatctctcccccaaattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtttctctcttctctctttatcttttg 41648970  T
Q  94 cttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttc 193  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||| |||||| ||||||| ||||||| |   ||||||||||||    
T  41648969 cttgtggttttgagcttttcactttgattcctagattagatctaggtgctgctattgttg-ttattgcttgtgttcactttgatattagttactactttc 41648871  T
Q  194 ctttgct 200  Q
    |||||||    
T  41648870 ctttgct 41648864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 48489542 - 48489749
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||||         ||||||     
T  48489542 ttggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtaaacaatctttggtgtgtttgttcctctcttctcgccctttatcttt 48489640  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |  |||| ||||||| |  |||||||||||    
T  48489641 tgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgattattgctcatgttcactttgatattggttactactt 48489740  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  48489741 tcctttgct 48489749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 496040 - 495838
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttct-----ctctttatcttgtgct 95  Q
    |||||||||||||||||||| | ||||||||||||||| |||| |||| |||| ||||||||||| |||||||||||||     ||||||||||  ||||    
T  496040 ttggagagatcaatctctcccctatagtaggtcaagtt-ggacagaaccgggtcaacaatctttggtgtgtttgtttcttttctctctttatctcttgct 495942  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    |||| |||| |  |||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||| |  |||||||||||||||    
T  495941 tgtgattttctatttttcactttgattcctagattagatctaggtgttgttattgttg-ttattgtttgtgtttactttgatattggttactactttcct 495843  T
Q  196 ttgct 200  Q
    |||||    
T  495842 ttgct 495838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 19502289 - 19502496
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct---------ctttatcttg 91  Q
    |||||||||||||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| |||||||||||||||         |||||| |||    
T  19502289 ttggagagatcaatctctcctccagagtaagtcaagtttggaacgaagtgggtgaacaatctttggtgtgtttgtttctctcttctctccctttattttg 19502388  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||||| | |||||||||||||| ||| |||||||||||||| ||||||| ||| || ||| |||| ||||||||||||  |||||||||||    
T  19502389 tgcttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattg-ttgttgcttgtatttactttgaaattggttactactt 19502487  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  19502488 tcctttgct 19502496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 41317491 - 41317289
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctc-----tctttatcttgtgct 95  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||     |||||||||| ||||    
T  41317491 ttggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtttctcctctctctttatcttttgct 41317393  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    |||||||||| |||||||||||||||| ||| |||||||||||||| ||||||| ||| || ||| ||||||| ||||||| |  |||||||||||||||    
T  41317392 tgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattg-ttgttgcttgtgttcactttgatattggttactactttcct 41317294  T
Q  196 ttgct 200  Q
    |||||    
T  41317293 ttgct 41317289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 1113768 - 1113970
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgct 95  Q
    |||||||||||||||||||| ||||| ||||||||||||| |||||| || || ||||||||||| |||||||||||||||     ||||||||| ||||    
T  1113768 ttggagagatcaatctctcccccatattaggtcaagtttg-accgaattgagtcaacaatctttggtgtgtttgtttctcttctccctttatcttttgct 1113866  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    |||||||||||| |||||| ||||||||||| |||||||||||||| | ||||||||| |||||| ||||||||||||||| |   ||||| ||||||||    
T  1113867 tgtggttttgtgtttttcattttgattcctagattagatctaggtgttattattgttg-ttattgcttgtgtttactttgatattagttaccactttcct 1113965  T
Q  196 ttgct 200  Q
    |||||    
T  1113966 ttgct 1113970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 48491690 - 48491891
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-------ctttatcttgtg 93  Q
    |||||||||||||||||||| ||| | ||||||||||| |  || |||| ||| |||||||||||||||||||||| ||||       ||||||||| ||    
T  48491690 ttggagagatcaatctctcccccagattaggtcaagttgg--ccaaacttggtaaacaatctttgatgtgtttgttcctcttctctccctttatcttttg 48491787  T
Q  94 cttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttc 193  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||| | |||||||||||||||||| ||||||| ||||||| |  |||||||||||||    
T  48491788 cttgtggttttgtgcttttcattttgattcctatattagatctaggcgttgttattgttgattattgcttgtgttcactttgatattggttactactttc 48491887  T
Q  194 cttt 197  Q
    ||||    
T  48491888 cttt 48491891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 31733026 - 31732819
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| ||||||||||| || ||||||| |||||||         ||||||     
T  31733026 ttggagagatcaatctctcccccaaattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgagtttgttcctctcttctctccctttatcttt 31732928  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||   | |||||||||||||||||| ||||||| |||||||||  |||||||||||    
T  31732927 tgcttgtggttttgtgcttttcactttgattactagattagatctaaaggttgttattgttgattattgcttgtgttcactttgaaattggttactactt 31732828  T
Q  192 tcctttgct 200  Q
    || ||||||    
T  31732827 tcatttgct 31732819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 14069890 - 14069684
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgt-------ttctctc--tttatcttg 91  Q
    |||||||||||||||||||| | | | ||||||||||| |||||||||||||| ||||||||||| |||||||||       |||||||  |||||||||    
T  14069890 ttggagagatcaatctctccccaagattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtccctctcttctctccctttatcttg 14069792  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||||| |||||||||||||||| ||| |||||||||||||| ||||||| || ||| ||| |||||||||||||||||   ||||||||||    
T  14069791 tgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattatt-attgttgcttgtgtttactttgaaattagttactactt 14069693  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  14069692 tcctttgct 14069684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 14379918 - 14379712
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgt-------ttctctc--tttatcttg 91  Q
    |||||||||||||||||||| | | | ||||||||||| |||||||||||||| ||||||||||| |||||||||       |||||||  |||||||||    
T  14379918 ttggagagatcaatctctcccctagattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtccctctcttctctccctttatcttg 14379820  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||||| |||||||||||||||| ||| |||||||||||||| ||||||| || ||| ||| |||||||||||||||||   ||||||||||    
T  14379819 tgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattatt-attgttgcttgtgtttactttgaaattagttactactt 14379721  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  14379720 tcctttgct 14379712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 39731480 - 39731649
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgttt---------ctctc--tttatct 89  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||         |||||  |||||||    
T  39731480 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtctttgttttcctcttccctctccttttatct 39731579  T
Q  90 tgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattg 160  Q
    ||||||||||| |||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||    
T  39731580 tgtgcttgtgg-tttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattg 39731649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 2 - 200
Target Start/End: Complemental strand, 47676192 - 47675987
Alignment:
Q  2 tggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttgt 92  Q
    ||||||||||||||||||| ||||| ||||||||||| |||||||||||| | ||||||||||| |||||||||| |||||||         |||||| |    
T  47676192 tggagagatcaatctctcccccatattaggtcaagtt-ggaccgaactggatcaacaatctttggtgtgtttgttcctctcttctctccatttatctttt 47676094  T
Q  93 gcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactacttt 192  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||| ||| || ||| ||||||| ||||||| |  ||||||||||||    
T  47676093 gcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattattg-ttgttgcttgtgttcactttgatattggttactacttt 47675995  T
Q  193 cctttgct 200  Q
    ||||||||    
T  47675994 cctttgct 47675987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 43864355 - 43864559
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||  ||| | ||||||||||| |||||||||||||| ||||||   || |||||||||| |||||||         ||||||     
T  43864355 ttggagagatcaatctctctcccagattaggtcaagtt-ggaccgaactgggtcaacaatagatggtgtgtttgttcctctcttctctccctttatcttt 43864453  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| |  | |||| ||||    
T  43864454 tgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattgattaccactt 43864553  T
Q  192 tccttt 197  Q
    ||||||    
T  43864554 tccttt 43864559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 4586272 - 4586479
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||| ||||| || ||||| || ||||||||||||||  |||||||||  |||||||||| |||||||         ||||||     
T  4586272 ttggagagatcaatctctcccccatattatgtcaactt-ggaccgaactgggtcgacaatctttcgtgtgtttgttcctctcttctctccctttatcttt 4586370  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    || |||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||| ||||||| ||||||| |||||||||  |||||| ||||    
T  4586371 tgtttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattgtttattattgcttgtgttcactttgaaattggttaccactt 4586470  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  4586471 tcctttgct 4586479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 197
Target Start/End: Original strand, 18126763 - 18126961
Alignment:
Q  9 atcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----------ctttatcttgtgcttg 97  Q
    |||||||||||| ||| | ||||||||||||| ||||| |||||| ||||||||||| |||||||||| ||||           ||||||||| ||||||    
T  18126763 atcaatctctcccccagactaggtcaagtttg-accgacctgggtcaacaatctttggtgtgtttgttcctctattttctctccctttatcttttgcttg 18126861  T
Q  98 tggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttccttt 197  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||| ||||||| ||||||| |  | |||||||||||||||    
T  18126862 tggttttgtgcttttcactttgattcctagattagatctaggtgttgttattcttgattattgcttgtgttcactttgatattgattactactttccttt 18126961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 10 - 200
Target Start/End: Original strand, 4178893 - 4179091
Alignment:
Q  10 tcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttgtgcttgtgg 100  Q
    ||||||||||||||| || |||||||||||| ||| |||| ||||||||||||||| ||||||||||||||||||         ||| || |||||||||    
T  4178893 tcaatctctcctccagagcaggtcaagtttgaaccaaactaggtgaacaatctttggtgtgtttgtttctctcttctctccttttatattttgcttgtgg 4178992  T
Q  101 ttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcctttgct 200  Q
    ||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||   || ||||||  |  ||||||||||||||||||||    
T  4178993 ttt-gtgtttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttacattcactttgttattggttactactttcctttgct 4179091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 200
Target Start/End: Complemental strand, 36146462 - 36146262
Alignment:
Q  4 gagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgcttgt 98  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||||| ||| ||||||||||| |||||||||||||||     ||||||||| |||||||    
T  36146462 gagagatcaatctctcccccatattaggtcaagtt-ggaccgaactaggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgt 36146364  T
Q  99 ggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttg-tgtttactttgaaagcggttactactttccttt 197  Q
    ||||||  |||||||||||||||| ||| ||||||||||| || ||||||| ||| || ||| ||| ||||| |||||| |  |||||||||||||||||    
T  36146363 ggtttttagcttttcactttgattactagattagatctagatgttgttattattg-ttgttgcttgttgtttgctttgatattggttactactttccttt 36146265  T
Q  198 gct 200  Q
    |||    
T  36146264 gct 36146262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 8153453 - 8153655
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgt-----ttctctctttatcttgtgct 95  Q
    |||||||||||||||||||| ||| | ||||||||||| |||| ||||||||| ||||||||||| ||||||| |     ||||||||||||||| ||||    
T  8153453 ttggagagatcaatctctcccccagattaggtcaagtt-ggactgaactgggtcaacaatctttggtgtgtttatttctcttctctctttatcttttgct 8153551  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    |||||||||| ||||||||||||||||  || || ||||||||||| ||||||| ||| || ||| ||||| | ||||||| |  | |||||||||||||    
T  8153552 tgtggttttgagcttttcactttgattattagatcagatctaggtgttgttattattg-ttgttgcttgtgctcactttgatattgattactactttcct 8153650  T
Q  196 ttgct 200  Q
    |||||    
T  8153651 ttgct 8153655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 25767017 - 25766807
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct-ttgatgtgtttgtttctct----------ctttatc- 88  Q
    |||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||           ||||||     
T  25767017 ttggagagttcaatctctcctccagagtaggtcaagtttagaccgaactgggtgaacaatctcttggtgtgtttgtttctctattctctcccttttatct 25766918  T
Q  89 ttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttacta 188  Q
    || ||||||| | |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||| | | ||||||  |  ||||||||    
T  25766917 ttttgcttgt-gatttgtgtttttcactttgatacctagattagatctaggtgctgttattgttgattattgcttgcgctcactttgttattggttacta 25766819  T
Q  189 ctttcctttgct 200  Q
    |||| |||||||    
T  25766818 cttttctttgct 25766807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 77 - 197
Target Start/End: Original strand, 26417511 - 26417631
Alignment:
Q  77 tctctctttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttga 176  Q
    |||| ||||||||| |||||||||||||| ||||||||||||||||| || |||| |||||||||||||||||||||||||||| ||||| |||||||||    
T  26417511 tctccctttatcttttgcttgtggttttgagcttttcactttgattcatagattatatctaggtgctgttattgttgattattgcttgtggttactttga 26417610  T
Q  177 aagcggttactactttccttt 197  Q
     |  |||||||||||||||||    
T  26417611 tattggttactactttccttt 26417631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 24525559 - 24525354
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgct 95  Q
    |||||||||||||||||||| | | | ||||||||||| |||| ||||||||| || |||||||| |||||||||||||||     ||||||||| ||||    
T  24525559 ttggagagatcaatctctccccaagattaggtcaagtt-ggacggaactgggtcaataatctttggtgtgtttgtttctcttctctctttatcttttgct 24525461  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttg-tgtttactttgaaagcggttactactttcc 194  Q
    |||||||||| |||||||||||||||| ||||||| |||||||||| ||||||| ||| || ||| ||| ||||| |||||| |  | |||||||||| |    
T  24525460 tgtggttttgagcttttcactttgattactaaatttgatctaggtgttgttattattg-ttgttgcttgttgtttgctttgatattgattactacttttc 24525362  T
Q  195 tttgctac 202  Q
    ||||||||    
T  24525361 tttgctac 24525354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 47674000 - 47673797
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||| ||||| || |||||||| |||||||||||  | ||||||||||| |||||||||| |||||||         ||||||     
T  47674000 ttggagagatcaatctctcc-ccatattaagtcaagtt-ggaccgaactgaatcaacaatctttggtgtgtttgttcctctcttctctccctttatcttt 47673903  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||||||||| ||||||| ||| || ||||||||||| ||||||| |  |||||||||||    
T  47673902 tgcttgtggttttgtacttttcactttgattactagattagatctaggtgttgttattattg-ttgttgtttgtgttcactttgatattggttactactt 47673804  T
Q  192 tcctttg 198  Q
    || ||||    
T  47673803 tcttttg 47673797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 48408915 - 48409125
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct-ttgatgtgtttgtttctctctt----------tatct 89  Q
    |||||||| | ||||||||||||| |||| ||||||||| |||||||||||||||||||| | ||| ||||||||||||||||||          |||||    
T  48408915 ttggagagtttaatctctcctccagagtatgtcaagtttagaccgaactgggtgaacaatttcttggtgtgtttgtttctctcttctctcccttttatct 48409014  T
Q  90 tgt-gcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttacta 188  Q
    | | ||||||| ||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||   | ||||||  |  ||||||||    
T  48409015 ttttgcttgtgattt-gtgcttttcactttgatacctagattagatctaggtgctgttattgttgattattgcttgcactcactttgttattggttacta 48409113  T
Q  189 ctttcctttgct 200  Q
    ||||||||||||    
T  48409114 ctttcctttgct 48409125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 43504211 - 43504044
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct-ttgatgtgtttgttt---------ctctc--tttatc 88  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||| |||||||         |||||  ||||||    
T  43504211 ttggagagttcaatctctcctccatagtaggtcaagtttggatcgaactgggtgaacaatctcttggtgtctttgttttcctcttccctctccttttatc 43504112  T
Q  89 ttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattg 160  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||||||   |||||| |||||||||||||    
T  43504111 ttgtgcttgt-gttttatgcttttcactttgattcctagattagatcta---gctgtttttgttgattattg 43504044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 30024789 - 30024609
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctttatcttgtgcttgtgg 100  Q
    ||||||||||||||| |||| ||| ||||||||||||| |||||||||||| | ||||||||||  |||||||               || |||||||||    
T  30024789 ttggagagatcaatcactcccccagagtaggtcaagtt-ggaccgaactggatcaacaatctttagtgtgttt---------------ttctgcttgtgg 30024706  T
Q  101 ttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcctttg 198  Q
    |||||||||||||||||||||| ||| |||||||||||||| ||||||| ||| || ||| |||||||||||||||||  ||||||||||||||||||    
T  30024705 ttttgtgcttttcactttgattactagattagatctaggtgttgttattattg-ttgttgcttgtgtttactttgaaattggttactactttcctttg 30024609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 12097924 - 12097789
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgct 95  Q
    |||||||||| ||||||||| ||| | ||||||||||| |||||||||| ||| ||||||||||| |||||||||||||||     ||||||||| ||||    
T  12097924 ttggagagatgaatctctcccccagattaggtcaagtt-ggaccgaactaggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgct 12097826  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattag 132  Q
    |||||||||| |||||||||||||||| ||| |||||    
T  12097825 tgtggttttgagcttttcactttgattactagattag 12097789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 31105450 - 31105253
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgt-gc 94  Q
    |||||||||| ||||||||| | | ||||| ||||||| |||||||||||||| |||| |  ||| | |||||||||||||     | ||||||| | ||    
T  31105450 ttggagagataaatctctccccaagagtagatcaagtt-ggaccgaactgggtaaacatttcttggtctgtttgtttctcttctctccttatctttttgc 31105352  T
Q  95 ttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcc 194  Q
    ||||||||||| |||||||||||||||||||| ||||||||| |||| |||||||||||    ||| ||||||||||||||| |  | ||||||||||||    
T  31105351 ttgtggttttgagcttttcactttgattcctagattagatcttggtgttgttattgttg----ttgcttgtgtttactttgatattgattactactttcc 31105256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 38671275 - 38671133
Alignment:
Q  5 agagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctct-------ttatcttgtgcttg 97  Q
    |||||| ||||| ||| ||| | ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||       ||||||| ||||||    
T  38671275 agagataaatctatcccccaaaataggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtttctctcttctctccttatcttttgcttg 38671177  T
Q  98 tggttttgtgcttttcactttgattcctaaattagatctaggtg 141  Q
    |||||||| |||||||||||||||| ||| ||| ||||||||||    
T  38671176 tggttttgagcttttcactttgattactagatttgatctaggtg 38671133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 34310773 - 34310709
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttg 65  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34310773 ttggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttg 34310709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18388817 - 18388756
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18388817 ttggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 18388756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18392253 - 18392192
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18392253 ttggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 18392192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 31519013 - 31519158
Alignment:
Q  1 ttggagagatcaatctctc-ctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctttatcttgtgcttgtg 99  Q
    ||||||||||||||||||| | ||| ||||||||||||| |||||||||||| | |||| |  ||| |||||||||||||||  || ||||   ||| ||    
T  31519013 ttggagagatcaatctctctccccagagtaggtcaagtt-ggaccgaactggataaacatttcttggtgtgtttgtttctcttctt-tctttatcttttg 31519110  T
Q  100 gttttgtgcttttcactttgattcctaaattagatctaggtgctgttatt 149  Q
     ||  |||||||||||||||||||||| |||||||||||||| |||||||    
T  31519111 ctt--gtgcttttcactttgattcctagattagatctaggtgttgttatt 31519158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6592397 - 6592336
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  6592397 ttggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 6592336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6594615 - 6594554
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  6594615 ttggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 6594554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22270084 - 22270140
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  22270084 ttggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaaca 22270140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 24789964 - 24790013
Alignment:
Q  13 atctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24789964 atctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 24790013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 32060379 - 32060318
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  32060379 ttggagagtacaatctctcctccagagtaggtcaagtttggaccgaacttggtgaacaatct 32060318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 32358111 - 32358055
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  32358111 ttggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaaca 32358055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 36574572 - 36574434
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgttt-----ctctctttatcttgtgct 95  Q
    |||||||||||||||  ||| | | |||||||||| |||||||| |||||||| |||| |  |||||||||||||||     ||||||||||||| | ||    
T  36574572 ttggagagatcaatccatcc-ctagagtaggtcaa-tttggaccaaactgggtaaacatttcttgatgtgtttgtttttcttctctctttatctttttct 36574475  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatcta 137  Q
    |||||||||||| ||||||| |||||||||| ||||||||||    
T  36574474 tgtggttttgtgtttttcac-ttgattcctagattagatcta 36574434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 30814547 - 30814629
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctcttt 85  Q
    |||||||||||||||||||| ||||| ||||||||| |||||||||||||||| |||||| |||| |||||||||| || |||||    
T  30814547 ttggagagatcaatctctcccccatattaggtcaag-ttggaccgaactgggtcaacaat-tttggtgtgtttgttcctttcttt 30814629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 200
Target Start/End: Original strand, 23344163 - 23344283
Alignment:
Q  76 ttctctctttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttg 175  Q
    ||||||||||||||  | |||| ||||||||| ||||||||||||||| || |||| ||||||||  |||||||||||    ||| ||||| |||||| |    
T  23344163 ttctctctttatctctttcttgcggttttgtgtttttcactttgattcgtagattaaatctaggttttgttattgttg----ttgcttgtggttacttgg 23344258  T
Q  176 aaagcggttactactttcctttgct 200  Q
    | |  ||||||||||||||||||||    
T  23344259 atattggttactactttcctttgct 23344283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 23565040 - 23564962
Alignment:
Q  76 ttctctctttatcttgtgcttgtggtttt-gtgcttttcactttgattcctaaattagatctaggtgctgttattgttg 153  Q
    |||||| |||||||| ||||||||||||| ||| |||||||||||||| ||| |||||||||||||  |||||||||||    
T  23565040 ttctctatttatcttttgcttgtggtttttgtgattttcactttgatttctagattagatctaggttttgttattgttg 23564962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1560723 - 1560662
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||| | ||||||    
T  1560723 ttggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtaaccaatct 1560662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2390393 - 2390453
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| |||||| |||||    
T  2390393 ttggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactaggtgaataatct 2390453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3259106 - 3259162
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||    
T  3259106 ttggagagatcaatctctcctccagagtaggtcaag-ttgaaccgaactgggtgaaca 3259162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 4253582 - 4253443
Alignment:
Q  4 gagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttct-----ctctttatcttgtgcttgt 98  Q
    |||||||||||||||||  || |||||||||| ||||||||||||| ||| |||| |  ||| |||||||||||||     ||||||||| | |||||||    
T  4253582 gagagatcaatctctcccacagagtaggtcaa-tttggaccgaactaggtaaacatttcttggtgtgtttgtttctcttcactctttatcgtttgcttgt 4253484  T
Q  99 ggttttgtgcttttcactttgattcctaaattagatctaggt 140  Q
    | |||||| |||||| | |||||| ||| |||||||||||||    
T  4253483 gcttttgtacttttcgc-ttgatttctatattagatctaggt 4253443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 8359373 - 8359316
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| |||||||||   |||||||||||||||||||||    
T  8359373 ttggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaaca 8359316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20344008 - 20344068
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  20344008 ttggagagtacaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaacaatct 20344068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 6432082 - 6432134
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtg 54  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||||||||    
T  6432082 ttggagagatcaatctctccttcagagtaggtcaag-ttggaccgaactgggtg 6432134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 48599391 - 48599335
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| || || ||||| |||||||||||||||||||||    
T  48599391 ttggagagatcaatctctcctccagagcagatcaag-ttggaccgaactgggtgaaca 48599335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 2759254 - 2759127
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct---------ctttatcttg 91  Q
    ||||||| |||||||||| | ||| | ||||||||||| |||||||||| ||| ||||||| ||| ||||||| |||||||         |||||||||     
T  2759254 ttggagatatcaatctcttccccagattaggtcaagtt-ggaccgaacttggtcaacaatcattggtgtgtttctttctctcttctctccctttatcttt 2759156  T
Q  92 tgcttgtggttttgtgcttttcactttga 120  Q
    ||||| ||||||||||||||| |||||||    
T  2759155 tgcttatggttttgtgcttttaactttga 2759127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4508763 - 4508707
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||| || || ||||||| ||| |||||||||||||||||||||    
T  4508763 ttggagagatcaatctcttcttcagagtaggttaag-ttggaccgaactgggtgaaca 4508707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18396429 - 18396486
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||| | ||||||||||   ||||||||||||||| ||||    
T  18396429 ttggagagatcaatctctcctcaagagtaggtcaatggtggaccgaactgggtaaaca 18396486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 5513716 - 5513645
Alignment:
Q  9 atcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct 81  Q
    ||||||||| |||||| |||||||||| ||||||| ||||||||| |||| |  |||| ||||||||||||||    
T  5513716 atcaatctcacctccagagtaggtcaa-tttggactgaactgggtaaacatttcttgacgtgtttgtttctct 5513645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6360009 - 6359951
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaat 60  Q
    |||||||||||||||||| | ||||| ||||||||| ||||| |||||||||| ||||||    
T  6360009 ttggagagatcaatctcttccccatattaggtcaag-ttggatcgaactgggtcaacaat 6359951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29608848 - 29608902
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaa 56  Q
    ||||||| ||||||| |||||||| ||||||||||| ||||||||||||| |||||    
T  29608848 ttggagatatcaatcactcctccagagtaggtcaag-ttggaccgaactgagtgaa 29608902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 26639439 - 26639516
Alignment:
Q  4 gagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct 81  Q
    |||||||||||||||||||||||||| ||||   ||| |||||||||| | || |||  ||| || ||||||||||||    
T  26639439 gagagatcaatctctcctccatagtatgtcattgttgtaccgaactggctaaaaaattcttggtgcgtttgtttctct 26639516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 129; Significance: 6e-67; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 56178694 - 56178486
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||         ||||||     
T  56178694 ttggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttt 56178595  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||| ||||||| ||||||| ||||||| |  |||||||||||    
T  56178594 tgcttgtggttttgtgcttttcactttcattcctagattagatctaggtgttgttattgtttattattgcttgtgttcactttgatattggttactactt 56178495  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  56178494 tcctttgct 56178486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 4 - 197
Target Start/End: Complemental strand, 5370137 - 5369935
Alignment:
Q  4 gagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttgtgc 94  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||         |||||| |||    
T  5370137 gagagatcaatctctcctccagagtaggtcaagtttggaccgaactgagtgaacaatctttgatgtgtttgtttatctcttctctccttttatcttttgc 5370038  T
Q  95 ttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcc 194  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| |  | ||||||||||||    
T  5370037 ttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattgattactactttcc 5369938  T
Q  195 ttt 197  Q
    |||    
T  5369937 ttt 5369935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 47038468 - 47038268
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgct 95  Q
    |||||||||||||||||||| ||| |||| |||||||| |||||||||||||| ||||||||||| |||||||||||||||     ||||||||| ||||    
T  47038468 ttggagagatcaatctctcccccagagtaagtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgct 47038370  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||| |  |||||||||||||||    
T  47038369 tgtggttttgtgcttttcactttgattcctagattagatctaggtgttgttattgttg-ttattgtttgtgtttactttgatattggttactactttcct 47038271  T
Q  196 ttg 198  Q
    |||    
T  47038270 ttg 47038268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 48143154 - 48143366
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||         ||||||||     
T  48143154 ttggagagatcaatctctcctccagagtaggtcaagtttggaccaaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttt 48143253  T
Q  92 tgcttgtggttttgtgc----ttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttact 187  Q
    |||||||| ||||||||    |||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||||||| |  |||||||    
T  48143254 tgcttgtgattttgtgcttttttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttact 48143353  T
Q  188 actttcctttgct 200  Q
    |||||||||||||    
T  48143354 actttcctttgct 48143366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 48893695 - 48893493
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgct 95  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||     ||||||||| ||||    
T  48893695 ttggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgct 48893597  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    |||| ||||||||||||||||||||||| |  |||||||||||||||||||||||||| |||||| ||||||||||||||| |  |||||||||||||||    
T  48893596 tgtgattttgtgcttttcactttgattcttggattagatctaggtgctgttattgttg-ttattgcttgtgtttactttgatattggttactactttcct 48893498  T
Q  196 ttgct 200  Q
    |||||    
T  48893497 ttgct 48893493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 9927515 - 9927309
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct--------ctttatcttgt 92  Q
    |||||||||||||||||||| ||| | ||||||||||| ||||||||||| || ||||||||||| |||||||||| ||||        ||||||||| |    
T  9927515 ttggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgagtcaacaatctttggtgtgtttgttcctctattctctcctttatctttt 9927417  T
Q  93 gcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactacttt 192  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||| |  ||| ||||||||    
T  9927416 gcttgtggatttgtgcttttcactttgattcctagattaaatctaggtgctgttattgttgattattgcttgtgtttactttgatattggtaactacttt 9927317  T
Q  193 cctttgct 200  Q
    ||||||||    
T  9927316 cctttgct 9927309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 52095419 - 52095214
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||         ||||||     
T  52095419 ttggagagatcaatctctcctccagagtagg-caagtttggaccgaactgggtgaacaatttttggtgtgtttgtttctctcttctctccttttatcttt 52095321  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    | |||||||||||||||||||| |||||| ||||| |||||||||||||| |||||||||||||||||  ||||||| ||||||| |  | |||||||||    
T  52095320 tccttgtggttttgtgcttttctctttgactcctagattagatctaggtgttgttattgttgattattacttgtgttcactttgatattgattactactt 52095221  T
Q  192 tcctttg 198  Q
    |||||||    
T  52095220 tcctttg 52095214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 5429790 - 5429973
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||| ||| | ||||| ||||| |||||||||||||| |||||||||||||||||||||| |||||||         ||||||     
T  5429790 ttggagagatcaatctctcccccagattaggttaagtt-ggaccgaactgggtcaacaatctttgatgtgtttgttcctctcttctctccctttatcttt 5429888  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttga 176  Q
    | |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5429889 tacttgtggttttgagcttttcactttgattcctagattagatctaggtgctgttattgttgattattgtttgtgttcactttga 5429973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 34570471 - 34570264
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||| ||| | ||||| ||||| ||| |||||||||| ||||||||||| |||||||||| |||||||         ||||||     
T  34570471 ttggagagatcaatctctcccccagattaggttaagtt-ggatcgaactgggtcaacaatctttggtgtgtttgttcctctcttctctccttttatcttt 34570373  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||| | ||||| |  |||||||||||    
T  34570372 tgcttgtggttttgtgcttttcactttgattcttagattagatctaggtgttgttattgttgattattgtttgtgttcattttgatattggttactactt 34570273  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  34570272 tcctttgct 34570264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 198
Target Start/End: Complemental strand, 52082716 - 52082515
Alignment:
Q  6 gagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttgtgctt 96  Q
    ||||||| ||||||||||| |||||||||||||| ||||||  ||||||||||||||||| ||||||||||| ||||||         |||||| |||||    
T  52082716 gagatcattctctcctccagagtaggtcaagtttagaccgatttgggtgaacaatctttggtgtgtttgtttatctcttctctccttttatcttttgctt 52082617  T
Q  97 gtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcctt 196  Q
    |||||||| ||||||||  ||||||||||| || |||||||||||||||||||||||||||||| ||||||| ||||||| |  ||||||||||||||||    
T  52082616 gtggttttatgcttttctttttgattcctagataagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactttcctt 52082517  T
Q  197 tg 198  Q
    ||    
T  52082516 tg 52082515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 26175693 - 26175487
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||||         ||||||     
T  26175693 ttggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgttcctctcttctctccctttatcttt 26175595  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||||| |||||||||||||||| ||| |||||||||||||| ||||||| |||  ||||| |||||||||||||||||  |||||||||||    
T  26175594 tgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattg-ctattgcttgtgtttactttgaaattggttactactt 26175496  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  26175495 tcctttgct 26175487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 52467411 - 52467208
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgct 95  Q
    |||||||||||||||||||| | | | ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||     ||||||||| ||||    
T  52467411 ttggagagatcaatctctccccgagattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgct 52467313  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    |||||||||| |||||||||||||||| ||| |||||||||| ||| ||||||| ||||| |||| |||| |||||||||| |  |||||| ||||||||    
T  52467312 tgtggttttgagcttttcactttgattactagattagatctatgtgttgttattattgatgattgcttgtctttactttgatattggttaccactttcct 52467213  T
Q  196 ttgct 200  Q
    |||||    
T  52467212 ttgct 52467208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 12743982 - 12743779
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctcttt---------atcttg 91  Q
    |||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||| |||||||||| ||||||||         |||||     
T  12743982 ttggagagatcaatctctcccccatattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgttcctctcttttctccttttatcttt 12743884  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||| ||||||||||||||||||||||| ||| |||||||||||||| |||||||    ||| ||| |||||||||||||||||  |||||||||||    
T  12743883 tgcttgtagttttgtgcttttcactttgattactagattagatctaggtgttgttatt----attgttgcttgtgtttactttgaaattggttactactt 12743788  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  12743787 tcctttgct 12743779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 46147448 - 46147246
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgct 95  Q
    ||||||| |||||||||||| ||| | ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||     ||||||||| ||||    
T  46147448 ttggagacatcaatctctcccccaaattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgct 46147350  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    |||||||||| |||||||||||||||| ||| |||||||||||||  ||||||| ||| || ||| ||||||| ||||||| |  |||||||||||||||    
T  46147349 tgtggttttgagcttttcactttgattactagattagatctaggtattgttattattg-ttgttgcttgtgttcactttgatattggttactactttcct 46147251  T
Q  196 ttgct 200  Q
    |||||    
T  46147250 ttgct 46147246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 13992350 - 13992141
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc----------tttatc-t 89  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||          |||||| |    
T  13992350 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactaggtgaacaatctttggtgtgtttgtttctctcttctctcccttttatctt 13992251  T
Q  90 tgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactac 189  Q
    | ||||||| | |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||   | ||||||  |  |||||||||    
T  13992250 tttgcttgt-gatttgtgcttttcactttgatacctagattagatctaggtgctgttattgttgattattgcttgcactcactttgttattggttactac 13992152  T
Q  190 tttcctttgct 200  Q
    |||||||||||    
T  13992151 tttcctttgct 13992141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 200
Target Start/End: Original strand, 5871934 - 5872135
Alignment:
Q  4 gagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt-------tatcttgtgctt 96  Q
    ||||||||||||||||| ||| | ||||||||||||| |||||||||||| ||||||||||| |||||||| |||||||||       |||||| |||||    
T  5871934 gagagatcaatctctcccccagattaggtcaagtttg-accgaactgggtcaacaatctttggtgtgtttgattctctcttctctctctatcttttgctt 5872032  T
Q  97 gtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcctt 196  Q
     |||||||| |||||||||||||||| ||| |||||||||||||| ||||||| ||| || ||||||||||| ||||||| |  ||||||||||||||||    
T  5872033 ttggttttgagcttttcactttgattactagattagatctaggtgttgttattattg-ttgttgtttgtgttcactttgatattggttactactttcctt 5872131  T
Q  197 tgct 200  Q
    ||||    
T  5872132 tgct 5872135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 12739607 - 12739411
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||||         ||||||     
T  12739607 ttggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgttcctctcttctctccttttatcttt 12739509  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||||||||||||||||||||||||| ||  |||||||||||||| |||||||    ||||||| |||||||||||||||||  |||||||||||    
T  12739508 tgcttgtggttttgtgcttttcactttgattacttgattagatctaggtgttgttatt----attattgcttgtgtttactttgaaattggttactactt 12739413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 37740736 - 37740943
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||| ||| | | ||||||||| ||||||||||| || |||||| |||  |||||||||| |||||||         ||||||     
T  37740736 ttggagagatcaatctctcccccagatttggtcaagtt-ggaccgaactgtgtcaacaattttttgtgtgtttgttcctctcttctctccctttatcttt 37740834  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||| ||||||| |  | |||||||||    
T  37740835 tgcttgtggttttgtgcttttcactttgattcctacattagatctaggtgctgttattgttgattattgattctgttcactttgatattgattactactt 37740934  T
Q  192 tcctttgct 200  Q
    |||| ||||    
T  37740935 tcctgtgct 37740943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 36463446 - 36463249
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgt--gtttgt-ttctctctttatcttgtgcttg 97  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| ||||||||||| |||  |||| | ||||||||||||||| ||||||    
T  36463446 ttggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtttgtttctcttctctctttatcttttgcttg 36463348  T
Q  98 tggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttccttt 197  Q
    |||||||| | ||||| |||||||| | |||||||||||||||| ||||||| ||| || ||| ||||||||||||||| |  ||||| |||||||||||    
T  36463347 tggttttgagtttttcgctttgattaccaaattagatctaggtgttgttattattg-ttgttgcttgtgtttactttgatattggttattactttccttt 36463249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 45687239 - 45687037
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttct-----ctctttatcttgtgct 95  Q
    ||||||||||| |||||||||||||| || |||||||| |||||||||||||| ||||||||||| |||||||||||||     ||||||||||  ||||    
T  45687239 ttggagagatctatctctcctccatattatgtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtttcttttctctctttatctgttgct 45687141  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttg-tgtttactttgaaagcggttactactttcc 194  Q
    |||||||||| |||||||||||||||| ||| ||| |||||||||| ||||||| ||| || ||| ||| ||||| |||||| |  ||||||||||||||    
T  45687140 tgtggttttgagcttttcactttgattactagatt-gatctaggtgttgttattattg-ttgttgcttgttgtttgctttgatattggttactactttcc 45687043  T
Q  195 tttgct 200  Q
    ||||||    
T  45687042 tttgct 45687037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 31474262 - 31474466
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca-atctttgatgtgtttgtttctct-----ctttatcttgtgc 94  Q
    |||||||||| ||||||||| ||| ||||| ||||||| |||||||||||||| |||| ||||| | |||||||||||||||     |||||||||  ||    
T  31474262 ttggagagataaatctctccaccagagtagatcaagtt-ggaccgaactgggtaaacatatcttgg-tgtgtttgtttctcttctccctttatctttagc 31474359  T
Q  95 ttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcc 194  Q
    || || |||||||||||||||||| ||||||| |||||||||||||| ||||||||||| || ||||||||||||||||||| |  | |||||||||||     
T  31474360 ttttgattttgtgcttttcactttaattcctagattagatctaggtgttgttattgttg-ttgttgtttgtgtttactttgatattgattactactttca 31474458  T
Q  195 tttgctac 202  Q
    ||||||||    
T  31474459 tttgctac 31474466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 200
Target Start/End: Complemental strand, 54199960 - 54199758
Alignment:
Q  4 gagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt--------tatcttgtgct 95  Q
    ||||||||| ||||||| ||| | ||||||||||| |||| ||||||||| |||||| |||| |||||||||| |||||||        ||| || ||||    
T  54199960 gagagatcattctctcccccagattaggtcaagtt-ggac-gaactgggtcaacaatttttggtgtgtttgttcctctcttctctcctttatattttgct 54199863  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    ||||| |||||||||||||||||||||| || |||||||||||||| |||||||| ||||||||| ||||||| ||||||| |  |||||||||||||||    
T  54199862 tgtggatttgtgcttttcactttgattcttagattagatctaggtgatgttattgctgattattgcttgtgttcactttgatactggttactactttcct 54199763  T
Q  196 ttgct 200  Q
    |||||    
T  54199762 ttgct 54199758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 36994635 - 36994814
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgt-----ttctctctttatcttgtgct 95  Q
    |||||||||||||||||||| ||||| ||| ||||| |||||||||||||||| |||||| ||||  ||||||||     ||||||||||||||| ||||    
T  36994635 ttggagagatcaatctctcccccatattagatcaag-ttggaccgaactgggtcaacaat-tttggcgtgtttgtttctcttctctctttatcttttgct 36994732  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaa 178  Q
    |||||||||| | |||||||||||||| ||| |||||||||||||| ||||||| ||| || ||| |||||||||||||||||    
T  36994733 tgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattg-ttgttgcttgtgtttactttgaaa 36994814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 29254605 - 29254804
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtt-------tctctc--tttatcttg 91  Q
    |||||||||||||||||||  ||| | ||||||||||| |||||||||||||| ||||||||||| ||||||||||       ||||||  ||||||||     
T  29254605 ttggagagatcaatctctctcccaaattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgttcctctattctctccatttatcttt 29254703  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||| ||||||| ||| |  ||||||||||| ||||| | |  |||||||||||    
T  29254704 tgcttgtggttttgtgtttttcactttgattactagattagatctaggtgttgttattattg-tcgttgtttgtgttcactttaatattggttactactt 29254802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 6542236 - 6542037
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgct 95  Q
    |||||||||||||||||||| |||  |||||||||||| |||||||||||||| |||| |  ||| |||||||||||||||     ||||||||| | ||    
T  6542236 ttggagagatcaatctctcccccagggtaggtcaagtt-ggaccgaactgggtaaacatttcttggtgtgtttgtttctcttatctctttatctttttct 6542138  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    |||| ||||||| |||||||||| ||||||| |||||||||||||  |||||||||||    ||| ||||| ||||||||| |  ||||| |||||||||    
T  6542137 tgtgattttgtgtttttcactttaattcctagattagatctaggttttgttattgttg----ttgcttgtgattactttgatattggttattactttcct 6542042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 4588070 - 4588269
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctc-----tctttatcttgtgct 95  Q
    ||||||||| |||||||||| ||||| ||||| ||||| ||||| |||||||| |||| |   || ||||||||||||||     |||||||||| ||||    
T  4588070 ttggagagaacaatctctcccccataataggtgaagtt-ggaccaaactgggtaaacatttcatggtgtgtttgtttctcctctctctttatcttttgct 4588168  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    |||| |||||||||||||||||||||||||| ||||||| | |||  |||||||||||    ||||||||| || |||||| || |||||||| ||||||    
T  4588169 tgtgattttgtgcttttcactttgattcctatattagatattggttttgttattgttg----ttgtttgtgattgctttgatagtggttactattttcct 4588264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 29999863 - 29999716
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    ||| ||||||||||||||||         ||| ||||     
T  29999863 ttggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca----ttggtgtgtttgtttctctcttctctccttttgtcttt 29999768  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctg 144  Q
    ||||||||| |||||| ||||| |||||||||||| |||||||||||||||||    
T  29999767 tgcttgtgg-tttgtgtttttctctttgattcctagattagatctaggtgctg 29999716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 37229778 - 37229578
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgt-----ttctctctttatcttgtgct 95  Q
    ||||||||||||||||||||  |||||||||||||| |||||||||||| ||| |||| |  |||  ||||||||     ||||||||||||||| | ||    
T  37229778 ttggagagatcaatctctccctcatagtaggtcaag-ttggaccgaactaggtaaacatttcttggcgtgtttgtttctcttctctctttatcttttact 37229680  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    | ||||||||||||||||||||| |||||||||||||||||||||   |||||||||| |||||| ||||  ||||||||| |  ||||||||||| ||     
T  37229679 tatggttttgtgcttttcacttt-attcctaaattagatctaggt-tggttattgttg-ttattgcttgttgttactttgatattggttactacttccca 37229583  T
Q  196 ttgct 200  Q
    |||||    
T  37229582 ttgct 37229578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 31495373 - 31495196
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct-ttgatgtgtttgttt---------ctctc-------- 82  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||| |||||||         |||||            
T  31495373 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcctcttccctctccttttatc 31495274  T
Q  83 --tttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattg 160  Q
      |||||||||||||||| ||||| |||||||||||||| |||||| ||||||||||||||||||| |||||||||||||    
T  31495273 cttttatcttgtgcttgt-gttttatgcttttcactttgtttcctagattagatctaggtgctgtt-ttgttgattattg 31495196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 12745371 - 12745288
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctcttt 85  Q
    |||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||| |||||||||| ||||||||    
T  12745371 ttggagagatcaatctctcccccatattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgttcctctcttt 12745288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8393505 - 8393566
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8393505 ttggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 8393566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8395714 - 8395775
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8395714 ttggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 8395775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2209825 - 2209886
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    |||||||||| ||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  2209825 ttggagagattaatctctcctccagagtaggtcatggttggaccgaactgggtgaacaatct 2209886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 41964527 - 41964580
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtga 55  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  41964527 ttggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtga 41964580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 5136176 - 5136237
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  5136176 ttggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatct 5136237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 5138401 - 5138462
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  5138401 ttggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatct 5138462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8648250 - 8648306
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||    
T  8648250 ttggagagatcaatctctcctccagagtaggtcaag-ttggaccaaactgggtgaaca 8648306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41639537 - 41639593
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||    
T  41639537 ttggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgagtgaaca 41639593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 50673904 - 50673848
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||    
T  50673904 ttggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactaggtgaaca 50673848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 5207818 - 5207755
Alignment:
Q  76 ttctctctttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggt 140  Q
    |||||| |||||||  ||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  5207818 ttctctatttatctgttgcatgtggttttgtgcttttcac-ttgattcctaaattagatctaggt 5207755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 379491 - 379548
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| |||||||||   |||||||||||||| ||||||    
T  379491 ttggagagatcaatctctcctccagagtaggtcattgttggaccgaactggatgaaca 379548  T

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Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 3913789 - 3913867
Alignment:
Q  94 cttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttga 176  Q
    ||||||||||| | ||||||||||||||||||| ||||||| ||| |||| ||||||    |||||| |||||||||||||||    
T  3913789 cttgtggttttatacttttcactttgattcctagattagatatagatgctcttattg----ttattgcttgtgtttactttga 3913867  T

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Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 6656067 - 6656123
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||| ||||||||||    
T  6656067 ttggagagatcaatctctcatccagagtaggtcaag-ttggaccgaattgggtgaaca 6656123  T

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Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 46703612 - 46703669
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| |||||||||   |||||||||| ||||||||||    
T  46703612 ttggagagatcaatctctcctccagagtaggtcattgttggaccgaattgggtgaaca 46703669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 50262758 - 50262697
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||| |||||||| ||||||| |||||||||   |||||||||||||||||||||||||    
T  50262758 ttggagatatcaatctttcctccagagtaggtcattgttggaccgaactgggtgaacaatct 50262697  T

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Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 27417022 - 27416959
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttg 65  Q
    |||||||||||||||||||| ||| | ||||||||| ||||||||||||| || |||||||||||    
T  27417022 ttggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgagtcaacaatctttg 27416959  T

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Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 7122794 - 7122853
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaat 60  Q
    ||||||||  ||||||||||||||||||||||||||    ||||||||||||||||||||    
T  7122794 ttggagagtacaatctctcctccatagtaggtcaagcaaagaccgaactgggtgaacaat 7122853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 29056552 - 29056610
Alignment:
Q  79 tctctttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctag 138  Q
    |||||||||||| || ||||||||||||| ||||||| |||||||||| |||||||||||    
T  29056552 tctctttatcttttgtttgtggttttgtgtttttcac-ttgattcctagattagatctag 29056610  T

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Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7125013 - 7125074
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||||||||||    ||||||||||||||||||||||    
T  7125013 ttggagagtacaatctctcctccagagtaggtcaagcaaagaccgaactgggtgaacaatct 7125074  T

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Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 8665519 - 8665556
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtt 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  8665519 ttggagagatcaatctctcctccagagtaggtcaagtt 8665556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12073503 - 12073560
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    ||||||||||||||||||| |||| |||||||||   |||||||||||| ||||||||    
T  12073503 ttggagagatcaatctctcttccagagtaggtcattgttggaccgaactaggtgaaca 12073560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 13009501 - 13009421
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtg-tttgtttctct 81  Q
    ||||||||||| |||||||||||| | ||||||||| || |||||||||| || |||||||||||  ||| |||||||||||    
T  13009501 ttggagagatcgatctctcctccaaattaggtcaag-ttagaccgaactgtgtcaacaatctttggcgtgttttgtttctct 13009421  T

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Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 21703892 - 21703772
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgttt-----ctctctttatcttgtgct 95  Q
    ||||||| |||||||| ||| |||||||||||||   || ||||||||||||| |||| |  |||||||||||||||     |||||||||| || ||||    
T  21703892 ttggagatatcaatctatcc-ccatagtaggtcattgtttgaccgaactgggtaaacatttcttgatgtgtttgtttctcttctctctttatattttgct 21703794  T
Q  96 tgtggttttgtgcttttcactt 117  Q
    |||| ||||||| ||| |||||    
T  21703793 tgtgattttgtgttttacactt 21703772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 40632556 - 40632612
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||| | |||| |||||| |||||||||||||||| ||||    
T  40632556 ttggagagatcaatctctcctctaaagtaagtcaag-ttggaccgaactgggtaaaca 40632612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 85
Target Start/End: Original strand, 3796591 - 3796638
Alignment:
Q  38 ttggaccgaactgggtgaacaatctttgatgtgtttgtttctctcttt 85  Q
    |||||| ||||||||| ||||||||||| |||||||||| ||||||||    
T  3796591 ttggacggaactgggtcaacaatctttggtgtgtttgttcctctcttt 3796638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 26364347 - 26364405
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaat 60  Q
    |||||||||||||||||||| ||| | |||||||||||| ||| ||||||||| ||||||    
T  26364347 ttggagagatcaatctctcccccagattaggtcaagttt-gactgaactgggtcaacaat 26364405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 54883131 - 54883189
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaat 60  Q
    |||||| ||||||||||||||||| | || |||||| |||||||||||||||| ||||||    
T  54883131 ttggagggatcaatctctcctccagattaagtcaag-ttggaccgaactgggtcaacaat 54883189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 24969787 - 24969855
Alignment:
Q  12 aatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct 81  Q
    ||||| ||| ||| ||||||||||||| |||||||||||||| |||| |  ||| |||||||||||||||    
T  24969787 aatctatcccccagagtaggtcaagtt-ggaccgaactgggtaaacatttcttggtgtgtttgtttctct 24969855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 35662552 - 35662600
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactg 50  Q
    |||||||||||||| ||||||| | ||||||||||| |||||||||||||    
T  35662552 ttggagagatcaatatctcctcaagagtaggtcaag-ttggaccgaactg 35662600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 37754937 - 37754862
Alignment:
Q  76 ttctctctttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttg 153  Q
    ||||||||||||||| || ||||||||||| |||||  || ||||| |||| ||||||||||||| ||||| ||||||    
T  37754937 ttctctctttatcttatgtttgtggttttgggctttatac-ttgatccctagattagatctaggt-ctgttgttgttg 37754862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 6e-67; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 8550844 - 8550634
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgttt-----------ctctctttatct 89  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||           ||||||||||||    
T  8550844 ttggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgttttctctcttcttctctctttatct 8550745  T
Q  90 tgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactac 189  Q
    |||||||||| ||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||||||| |  |||||||||    
T  8550744 tgtgcttgtgattttgtgtttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactac 8550645  T
Q  190 tttcctttgct 200  Q
    |||||||||||    
T  8550644 tttcctttgct 8550634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 3156976 - 3157183
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||||         ||||||     
T  3156976 ttggagagatcaatctctcccccatattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgttcctctcttctctccctttatcttt 3157074  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| |  |||||||||||    
T  3157075 tgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttactactt 3157174  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  3157175 tcctttgct 3157183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 834224 - 834020
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt-------tatcttgtg 93  Q
    ||||||||||| |||||||| ||| ||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||       |||||| ||    
T  834224 ttggagagatctatctctcccccagagtaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtttctctcttctctctttatcttttg 834126  T
Q  94 cttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttc 193  Q
    |||||||||||| |||||||||||||||||| | ||||||||| |||| ||||||||||| |||||| ||||||||||||||| |  |||||||||||||    
T  834125 cttgtggttttgagcttttcactttgattcccagattagatcttggtgttgttattgttg-ttattgcttgtgtttactttgatattggttactactttc 834027  T
Q  194 ctttgct 200  Q
    |||||||    
T  834026 ctttgct 834020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 4552694 - 4552502
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctttatcttgtgcttgtgg 100  Q
    ||||||||||||||||||||  || ||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||  ||||||| |||||||||    
T  4552694 ttggagagatcaatctctccctcagagtaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtttctct--ttatcttttgcttgtgg 4552598  T
Q  101 ttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttccttt 197  Q
    ||||| |||||||||||||||| ||| |||||||||| ||| ||||||| ||| || ||  |||||||||||||||||  |||||||||||||||||    
T  4552597 ttttgagcttttcactttgattactagattagatctatgtgttgttattattg-ttgttacttgtgtttactttgaaattggttactactttccttt 4552502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 49918461 - 49918668
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||| ||| ||||||||||| |||||||||| |||||||         ||||||     
T  49918461 ttggagagatcaatctctcccccaaattaggtcaagtt-ggaccgaactaggtcaacaatctttggtgtgtttgttcctctcttctctccttttatcttt 49918559  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||| ||||||| ||||||| |  |||||||||||    
T  49918560 tgcttgtggatttgtgcttttcattttgattcctagattagatataggtgctgttattgttgattattgcttgtgttcactttgatattggttactactt 49918659  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  49918660 tcctttgct 49918668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 4 - 200
Target Start/End: Complemental strand, 40122250 - 40122051
Alignment:
Q  4 gagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgcttgt 98  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||||| ||| ||||||||||| |||||||||||||||     ||||||||| |||||||    
T  40122250 gagagatcaatctctcccccatattaggtcaagtt-ggaccgaactaggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgt 40122152  T
Q  99 ggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcctttg 198  Q
    ||||||| |||||||||||||||| |||||||||||||||||| ||||||| ||| || ||| ||||||| |||| || |  ||||||||||||||||||    
T  40122151 ggttttgagcttttcactttgattactaaattagatctaggtgttgttattattg-ttgttgcttgtgttcacttagatattggttactactttcctttg 40122053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 44455271 - 44455475
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||| ||| | ||||||||||||| |||||||||||| ||| ||||||| |||||||||| |||||||         ||||||     
T  44455271 ttggagagatcaatctctcccccagattaggtcaagtttg-accgaactgggtcaacgatctttggtgtgtttgttcctctcttctcttcctttatcttt 44455369  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |  |||||| ||||    
T  44455370 tgcttttggttttgtgtttttcactttgattcctagattagatctaggtgctgttattgttgattattgtttgtgttcactttgatattggttaccactt 44455469  T
Q  192 tccttt 197  Q
    | ||||    
T  44455470 ttcttt 44455475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 13316409 - 13316202
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||  || |||||||||||||         ||||| ||     
T  13316409 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttagtgagtttgtttctctcttctctccttttatattt 13316310  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||  || ||||||  |  | |||||||||    
T  13316309 tgcttgtgg-tttgtgtttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgttattgattactactt 13316211  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  13316210 tcctttgct 13316202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 20762783 - 20762986
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||         ||||||||     
T  20762783 ttggagagatcaatctctcctacagagtaggtcaagtttggaccgaactaggtgaccaatctttggtgtgtttgtttctctcttctctccttttatcttt 20762882  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||||||||||||||||||     |||||| ||||||||||||||||||||||||||||||||| |||  || ||||||| |  ||||| |||||    
T  20762883 tgcttgtggttttgtgcttttcac-----ttcctagattagatctaggtgctgttattgttgattattgcttgaattcactttgatattggttaatactt 20762977  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  20762978 tcctttgct 20762986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 37559925 - 37559715
Alignment:
Q  1 ttggagagatcaatctctcctcc-atagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt----------tatct 89  Q
    |||||||||||||||||||| || | | ||||||||||| |||||||||| ||| ||||||||||| |||||||||| |||||||          |||||    
T  37559925 ttggagagatcaatctctccccctagattaggtcaagtt-ggaccgaacttggtcaacaatctttggtgtgtttgttcctctcttctctcccctttatct 37559827  T
Q  90 tgtgcttgtggttttgtgcttttcactttgattcctaaatt-agatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttacta 188  Q
    | ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||| ||||||| |  ||||||||    
T  37559826 tttgcttgtggttttgtgcttttcactttgattcctagatttagatctaggtgctgttattgttgattattgcttgtgttcactttgatattggttacta 37559727  T
Q  189 ctttcctttgct 200  Q
    ||||||||||||    
T  37559726 ctttcctttgct 37559715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 3189441 - 3189590
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         ||||||||     
T  3189441 ttggagagatcaatctctcatccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttt 3189540  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtg 141  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  3189541 tgcttgtggttttgtgcttttcactttgattactagattagatctaggtg 3189590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 3198258 - 3198407
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         ||||||||     
T  3198258 ttggagagatcaatctctcatccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttt 3198357  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtg 141  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  3198358 tgcttgtggttttgtgcttttcactttgattactagattagatctaggtg 3198407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 3207097 - 3207246
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         ||||||||     
T  3207097 ttggagagatcaatctctcatccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttt 3207196  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtg 141  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  3207197 tgcttgtggttttgtgcttttcactttgattactagattagatctaggtg 3207246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 10925337 - 10925540
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgttt-----ctctctttatcttgtgct 95  Q
    ||||||| |||||||||||| | | | ||||| ||||| ||| |||||||||| |||||||||||||||||||||||     ||||||||||||| ||||    
T  10925337 ttggagaaatcaatctctcccctagattaggtaaagtt-ggatcgaactgggtcaacaatctttgatgtgtttgtttatcttctctctttatcttttgct 10925435  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    |||||||||| | ||||| |||||||| ||| |||||||||||||| |||||||||||||||||| ||||||| ||||||| |  | |||||||||||||    
T  10925436 tgtggttttgagtttttccctttgattactagattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattgattactactttcct 10925535  T
Q  196 ttgct 200  Q
    |||||    
T  10925536 ttgct 10925540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 200
Target Start/End: Complemental strand, 13138029 - 13137831
Alignment:
Q  5 agagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgcttgtg 99  Q
    ||||| |||||||||| | | |||||||||  || |||||||||||||| |||||||||||||||||||||||||||     ||||||||| ||||||||    
T  13138029 agagagcaatctctcccctagagtaggtcatatt-ggaccgaactgggtcaacaatctttgatgtgtttgtttctcttctctctttatcttttgcttgtg 13137931  T
Q  100 gttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcctttgc 199  Q
    |||||| | |||||||||||||| ||| |||||||||||||| ||||||| ||| || ||| |||||||||||||||||  |||||||||||||||||||    
T  13137930 gttttgaggttttcactttgattactagattagatctaggtgttgttattattg-ttgttgcttgtgtttactttgaaattggttactactttcctttgc 13137832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 50167232 - 50167030
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgct 95  Q
    |||||||||||||||||||| ||| | ||| ||||||| |||||||||| ||| ||||||||||| |||||||||||||||     ||||||||| ||||    
T  50167232 ttggagagatcaatctctcccccagattagctcaagtt-ggaccgaactaggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgct 50167134  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    ||||||||||  ||||||||||||||| ||| |||||||||||||| ||||||| ||| || ||  ||||||||||||||| |  |||||||||||||||    
T  50167133 tgtggttttgaacttttcactttgattactagattagatctaggtgttgttattattg-ttgtttcttgtgtttactttgatattggttactactttcct 50167035  T
Q  196 ttgct 200  Q
    |||||    
T  50167034 ttgct 50167030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 51765508 - 51765677
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgttt---------ctctc--tttatct 89  Q
    |||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| |||||||         |||||  |||||||    
T  51765508 ttggagagttcaatctctcctccagagtaggacaagtttggaccgaactgggtgaacaatctttggtgtctttgttttcctcttccctctccttttatct 51765607  T
Q  90 tgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattg 160  Q
    |||||||||||||| ||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||    
T  51765608 tgtgcttgtggttt-gtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattg 51765677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 200
Target Start/End: Complemental strand, 50169263 - 50169065
Alignment:
Q  5 agagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgcttgtg 99  Q
    |||||||||||||||| | | | ||||||||||| |||||||||||| | ||||||||||| |||||||||||||||     ||||||||| ||||||||    
T  50169263 agagatcaatctctcccctagattaggtcaagtt-ggaccgaactggatcaacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgtg 50169165  T
Q  100 gttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcctttgc 199  Q
    |||||| |||||||||||||||| ||| ||||||| |||||| ||||||| ||| || ||||||||||| ||||||| |  ||||||||||||| |||||    
T  50169164 gttttgagcttttcactttgattactagattagatataggtgttgttattattg-ttgttgtttgtgttcactttgatattggttactactttcatttgc 50169066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 28223478 - 28223272
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgt-------ttctctc--tttatcttg 91  Q
    |||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||| |||||||||       |||||||  ||||||||     
T  28223478 ttggagagatcaatctctcccccatattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtccctctcttctctccctttatcttt 28223380  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||| ||||||| |||||||||||||| ||| |||||||||||||| ||||||| ||| || ||| ||||||| ||||||| |  |||||||||||    
T  28223379 tgcttgtgattttgtgtttttcactttgattactagattagatctaggtgttgttattattg-ttgttgcttgtgttcactttgatattggttactactt 28223281  T
Q  192 tcctttgct 200  Q
    || ||||||    
T  28223280 tcgtttgct 28223272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 28220283 - 28220103
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgt-------ttctctc--tttatcttg 91  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| ||||||||||| |||||||||       |||||||  ||||||||     
T  28220283 ttggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtccctctcttctctccctttatcttt 28220185  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttacttt 174  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||| ||| || ||||||||||| |||||    
T  28220184 tgcttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttattattg-ttgttgtttgtgttcacttt 28220103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 31659349 - 31659553
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtt-------tctctc--tttatcttg 91  Q
    ||||||||||||||||||||  || | ||||||||||| |||||||||||||| ||||||||||| ||||||| ||       ||||||  ||||||||     
T  31659349 ttggagagatcaatctctccctcagattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttattcctcttttctctccttttatcttt 31659447  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||| ||||| |||||||||||||||||| ||||||| | ||||| |  |||||||||||    
T  31659448 tgcttatggttttgtgctttttactttgattcctagattagatcaaggtgttgttattgttgattattgcttgtgttcattttgatattggttactactt 31659547  T
Q  192 tccttt 197  Q
    | ||||    
T  31659548 ttcttt 31659553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 28265611 - 28265412
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgct 95  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||     ||||||||| || |    
T  28265611 ttggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttggt 28265513  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    |||||||||| |||||| ||||||||| ||| ||||||||||| || ||||||| ||| || ||| ||||||| ||||||| |  || ||||| ||||||    
T  28265512 tgtggttttgagctttttactttgattactagattagatctagatgttgttattattg-ttgttgcttgtgttcactttgatattggctactattttcct 28265414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 45644411 - 45644208
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgct 95  Q
    |||||||||||||| ||||| ||| | ||||||||||| |||||||||||||| ||||||||||| |||| ||||||||||     ||||||||| || |    
T  45644411 ttggagagatcaatatctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgcttgtttctcttctctctttatcttttgtt 45644313  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttg-tgtttactttgaaagcggttactactttcc 194  Q
    |||||||||| |||||||||||||||| ||| ||||||||||| || ||||||| ||| || ||| ||| ||||| |||||| |  ||||||||||||||    
T  45644312 tgtggttttgagcttttcactttgattgctagattagatctagatgttgttattattg-ttgttgcttgttgtttgctttgatattggttactactttcc 45644214  T
Q  195 tttgct 200  Q
    ||||||    
T  45644213 tttgct 45644208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 23555322 - 23555121
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgt-----ttctctctttatcttgtgct 95  Q
    |||||||| ||||||||||| ||||||||||||||| ||||| ||||||| || |||| |  ||| || ||||||     |||||||||||| || ||||    
T  23555322 ttggagagttcaatctctcc-ccatagtaggtcaag-ttggatcgaactgagtaaacatttcttggtgcgtttgtttctcttctctctttatgttttgct 23555225  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    |||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| || ||| ||||||||||||||| |  | |||||||||| ||    
T  23555224 tgtggttttgagcttttcactatgattcctaaattagatctaggtgttgttattgttg-ttgttgcttgtgtttactttgacattgattactacttttct 23555126  T
Q  196 ttgct 200  Q
    |||||    
T  23555125 ttgct 23555121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 37503614 - 37503431
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||| ||| | || |||||||| ||| |||||| ||| ||||||||||| |||||||||| |||||||         ||||||     
T  37503614 ttggagagatcaatctctcccccagattatgtcaagtt-ggatcgaactaggtcaacaatctttggtgtgtttgttcctctcttctctccctttatcttt 37503516  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttga 176  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||||| || ||||||||||||||| ||||||| |||||||    
T  37503515 tgcttgcggttttgtgcttttcactttaattcctagattagatctaggtgttgatattgttgattattgcttgtgttcactttga 37503431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 3847178 - 3846974
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt-------tatcttgtg 93  Q
    ||||||||||| |||||| | ||| | ||||||||||| |||||||||| ||| ||||||||||| ||||||||||||||||||       |||||| ||    
T  3847178 ttggagagatccatctcttccccagattaggtcaagtt-ggaccgaacttggtcaacaatctttggtgtgtttgtttctctcttctctctttatcttttg 3847080  T
Q  94 cttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgt---ttgtgtttactttgaaagcggttactact 190  Q
    |||||||||||| |||||||||||||||| ||| |||||||||||||| ||||||| || ||| ||||   ||||||| ||||||| |  ||||||||||    
T  3847079 cttgtggttttgagcttttcactttgattactatattagatctaggtgttgttattatt-attgttgttgcttgtgttcactttgatattggttactact 3846981  T
Q  191 ttccttt 197  Q
    |||||||    
T  3846980 ttccttt 3846974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 13659393 - 13659241
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgttt-----ctctctttatcttgtgct 95  Q
    |||||||||||||||||||| ||| ||||||| ||||| |||||||||||||| ||||||||||| ||| |||||||     ||||||||||||| ||||    
T  13659393 ttggagagatcaatctctcccccagagtaggttaagtt-ggaccgaactgggtcaacaatctttggtgtatttgtttctcttctctctttatcttttgct 13659295  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattg 150  Q
    ||||||||||| ||||||| ||||||||||| ||||||| |||||| ||||||||    
T  13659294 tgtggttttgtacttttca-tttgattcctagattagatttaggtgttgttattg 13659241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 55 - 197
Target Start/End: Original strand, 1833677 - 1833823
Alignment:
Q  55 aacaatctttgatgtgtttgttt-----ctctctttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttatt 149  Q
    ||||||||||| |||||||||||     ||||||||||||| ||||||| ||||||||||||||||||||||| ||| |||||||||||||| |||||||    
T  1833677 aacaatctttggtgtgtttgtttattttctctctttatcttttgcttgtagttttgtgcttttcactttgattactagattagatctaggtgttgttatt 1833776  T
Q  150 gttgattattgtttgtgtttactttgaaagcggttactactttccttt 197  Q
     ||| || ||| |||||||||||||||||  |||||| ||||||||||    
T  1833777 attg-ttgttgcttgtgtttactttgaaattggttacgactttccttt 1833823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 46065029 - 46065207
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgt-----ttctctctttatcttgtgct 95  Q
    |||||||||||||||||||| ||| ||||||||||||| ||| |||||||||| ||||||||||| |||||||||     ||||||||||||||| ||||    
T  46065029 ttggagagatcaatctctcccccagagtaggtcaagtt-ggatcgaactgggtaaacaatctttggtgtgtttgtttctcttctctctttatcttttgct 46065127  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaa 177  Q
    |||||||||| || |||||| || |||  || |||||||||||||| ||||||| ||| || ||| |||| |||||||||||    
T  46065128 tgtggttttgagcctttcacatt-attagtagattagatctaggtgttgttattattg-ttgttgcttgtatttactttgaa 46065207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 30476503 - 30476300
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    ||||| |||||||||||| | |||||  |||| ||||| |||||||||||||| ||||||||||| |||||||||| |||||||         ||||||     
T  30476503 ttggacagatcaatctctaccccatatgaggttaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgttcctctcttctctccttttatcttt 30476405  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    | |||||||||||| ||||||||||||||||  || ||||| |||| ||| ||||||| ||| || ||| |||||||||||||||||  |||||||||||    
T  30476404 tacttgtggttttgagcttttcactttgattattagattaggtctaagtgttgttattattg-ttgttgcttgtgtttactttgaaattggttactactt 30476306  T
Q  192 tccttt 197  Q
    ||||||    
T  30476305 tccttt 30476300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 28 - 200
Target Start/End: Complemental strand, 196937 - 196760
Alignment:
Q  28 taggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt-------tatcttgtgcttgtggttttgtgcttttcactttga 120  Q
    ||||||||||| |||||||||||| | ||||||||||| ||||||| ||||||||||       |||||| |||||||||||||| |||| |||||||||    
T  196937 taggtcaagtt-ggaccgaactggatcaacaatctttggtgtgtttttttctctcttctctctttatcttttgcttgtggttttgagcttctcactttga 196839  T
Q  121 ttcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcctttgct 200  Q
    || ||| ||||||| |||||| ||||||| ||| || ||| ||||||| ||||||| |  |||||||| |||||||||||    
T  196838 ttactagattagatgtaggtgttgttattattg-ttgttgcttgtgttcactttgatattggttactattttcctttgct 196760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 41361029 - 41361228
Alignment:
Q  5 agagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct-ttgatgtgtttgtttctct-----ctttatcttgtgcttgt 98  Q
    |||||||||| ||||| |||||||||||||  || |||||||||| ||| |||||| | ||| ||||||||||||| |     ||||||||| || ||||    
T  41361029 agagatcaatatctcccccatagtaggtcatatt-ggaccgaactaggtcaacaatatcttggtgtgtttgtttcttttctcactttatcttttgtttgt 41361127  T
Q  99 ggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcctttg 198  Q
    ||||||| |||||| ||||||||||||| ||||||| |||||| ||||||||||| || ||  ||||||||||||||| |  | ||| ||||||||||||    
T  41361128 ggttttgagctttttactttgattcctagattagatataggtgttgttattgttg-ttgttacttgtgtttactttgatattgattaatactttcctttg 41361226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9987312 - 9987373
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9987312 ttggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 9987373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20622294 - 20622233
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20622294 ttggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 20622233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29136358 - 29136415
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  29136358 ttggagagatcaatctctcctccagagtaggtcaagtttggaccgaactaggtgaaca 29136415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40282488 - 40282549
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40282488 ttggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 40282549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 44203743 - 44203804
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  44203743 ttggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 44203804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 16455732 - 16455936
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgt-----ttctctctttatcttgtgct 95  Q
    |||||||||||||||||||  ||||||| ||||||  ||||||| ||||| || |||| |  ||| ||| |||||     ||||||||||||||| | ||    
T  16455732 ttggagagatcaatctctctcccatagtcggtcaa-attggaccaaactgtgtaaacatttcttggtgtatttgtttctcttctctctttatcttttact 16455830  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    |||||||||| | |||||||||||||| | | ||||||||||  || ||||||| ||| || ||| ||  ||||||||||| |  ||||||||||||| |    
T  16455831 tgtggttttgagtttttcactttgattaccagattagatctatatgttgttattattg-ttgttgcttacgtttactttgatattggttactactttcat 16455929  T
Q  196 ttgctac 202  Q
    |||||||    
T  16455930 ttgctac 16455936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13547146 - 13547090
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  13547146 ttggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaaca 13547090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13549057 - 13549001
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  13549057 ttggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaaca 13549001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37033129 - 37033068
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    |||||||||| ||||||| ||||||||||||||| | |||||||||||||||||||||||||    
T  37033129 ttggagagattaatctcttctccatagtaggtcatggttggaccgaactgggtgaacaatct 37033068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 37168409 - 37168465
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  37168409 ttggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaaca 37168465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 42298028 - 42297971
Alignment:
Q  5 agagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    |||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  42298028 agagatcaatctctcctccagagtaggtcatggttggaccgaactgggtgaacaatct 42297971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 44646857 - 44646743
Alignment:
Q  5 agagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct--ctttatcttgtgcttgtggtt 102  Q
    |||||||||||||| | | | |||||||||| ||||||||||||| ||| || | | |||| || ||||||||||||  ||||||||| |||||||| ||    
T  44646857 agagatcaatctcttcccaaaagtaggtcaa-tttggaccgaactaggtaaatattttttggtgcgtttgtttctctttctttatcttttgcttgtgatt 44646759  T
Q  103 ttgtgcttttcacttt 118  Q
    ||||||||||||||||    
T  44646758 ttgtgcttttcacttt 44646743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 44650215 - 44650101
Alignment:
Q  5 agagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct--ctttatcttgtgcttgtggtt 102  Q
    |||||||||||||| | | | |||||||||| ||||||||||||| ||| || | | |||| || ||||||||||||  ||||||||| |||||||| ||    
T  44650215 agagatcaatctcttcccaaaagtaggtcaa-tttggaccgaactaggtaaatattttttggtgcgtttgtttctctttctttatcttttgcttgtgatt 44650117  T
Q  103 ttgtgcttttcacttt 118  Q
    ||||||||||||||||    
T  44650116 ttgtgcttttcacttt 44650101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 79 - 198
Target Start/End: Complemental strand, 8870698 - 8870580
Alignment:
Q  79 tctctttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaa 178  Q
    |||||||||||| |||||||||||||||  |||||||||||||||||| ||| |||||||||  | || || ||| || ||| ||||| ||||||||| |    
T  8870698 tctctttatcttttgcttgtggttttgtatttttcactttgattcctagatttgatctaggttttttttttattg-tttttgcttgtgattactttgata 8870600  T
Q  179 gcggttactactttcctttg 198  Q
       |||||||||||||||||    
T  8870599 ctagttactactttcctttg 8870580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 9036537 - 9036588
Alignment:
Q  11 caatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  9036537 caatctctcctcgagagtaggtcaagtttggaccgaactgggtgaacaatct 9036588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11348809 - 11348865
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||    
T  11348809 ttggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgagtgaaca 11348865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 21054069 - 21054130
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  21054069 ttggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatct 21054130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28242415 - 28242472
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| |||||||||   |||||||||||||||||||||    
T  28242415 ttggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaaca 28242472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 47255397 - 47255340
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| |||||||||   |||||||||||||||||||||    
T  47255397 ttggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaaca 47255340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 15820422 - 15820614
Alignment:
Q  5 agagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgcttgtg 99  Q
    |||||| |||||||| |||| ||||||||||||| ||| |||||| ||| |||| |  ||| |||||||||||||||     | |||||   ||||||||    
T  15820422 agagataaatctctcatccagagtaggtcaagtt-ggatcgaactaggtaaacatttattggtgtgtttgtttctcttctctccttatccattgcttgtg 15820520  T
Q  100 gttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcctttgc 199  Q
     || || |||||||  ||||||||||| |||||||||||||| |||| |||       ||| ||||||||||||||| |   ||||||||||||||||||    
T  15820521 tttatgagcttttctatttgattcctatattagatctaggtgttgttgttg-------ttgcttgtgtttactttgatattagttactactttcctttgc 15820613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 193722 - 193778
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||| ||||| |||| |||||| |||||||||||||||||||||    
T  193722 ttggagagatcaatctcttctccagagtatgtcaag-ttggaccgaactgggtgaaca 193778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7482287 - 7482231
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||| ||||||||    
T  7482287 ttggagagatcaatctctccttcagagtaggtcaag-ttggaccgaactaggtgaaca 7482231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 31925764 - 31925708
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||||| ||||||||    
T  31925764 ttggagagatcaatctctcctctagagtaggtcaag-ttggaccgaactaggtgaaca 31925708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 47115283 - 47115340
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||| ||||| |||||||||   |||||||||||||||||||||    
T  47115283 ttggagagatcaatctctgctccagagtaggtcattgttggaccgaactgggtgaaca 47115340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 5460097 - 5460160
Alignment:
Q  76 ttctctctttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggt 140  Q
    ||||||||||||||| |||||||||||||||||||| || |||| |||||| ||| |||||||||    
T  5460097 ttctctctttatcttttgcttgtggttttgtgctttacattttg-ttcctagattcgatctaggt 5460160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 19752797 - 19752859
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatcttt 64  Q
    |||||||||||||||||||  ||||| ||||||||| |||||||||||| ||| ||||||||||    
T  19752797 ttggagagatcaatctctctcccatattaggtcaag-ttggaccgaactaggtcaacaatcttt 19752859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 927954 - 927836
Alignment:
Q  76 ttctctctttatcttgtgcttgtggttttgtgcttttcactttgatt-cctaaattagatctaggtgctgttattgttgattattgtttgtgtttacttt 174  Q
    ||||||||||||||| || |||||||||||  |||||||||||||||  ||| |||||||||| ||  |||| ||||||    ||||||||| |||||||    
T  927954 ttctctctttatcttttgtttgtggttttgaacttttcactttgattatctatattagatctaagttttgttgttgttg----ttgtttgtgattacttt 927859  T
Q  175 gaaagcggttactactttccttt 197  Q
    || |  |||||| |||| |||||    
T  927858 gatattggttaccacttcccttt 927836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 34603692 - 34603740
Alignment:
Q  5 agagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtg 54  Q
    |||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  34603692 agagatcaatctctcctccagagtaggtcaag-ttggaccgaactaggtg 34603740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 16914153 - 16914089
Alignment:
Q  76 ttctctctttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggt 140  Q
    ||||||||||||||| |||||| ||||||||||||| |   ||| ||||||| ||||||||||||    
T  16914153 ttctctctttatcttttgcttgcggttttgtgctttcccacttggttcctaagttagatctaggt 16914089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 19072953 - 19072906
Alignment:
Q  38 ttggaccgaactgggtgaacaatctttgatgtgtttgtttctctcttt 85  Q
    |||||||||||||||| ||||||||||| |||||||||| || |||||    
T  19072953 ttggaccgaactgggtcaacaatctttggtgtgtttgttcctttcttt 19072906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 19120843 - 19120796
Alignment:
Q  38 ttggaccgaactgggtgaacaatctttgatgtgtttgtttctctcttt 85  Q
    |||||||||||||||| ||||||||||| |||||||||| || |||||    
T  19120843 ttggaccgaactgggtcaacaatctttggtgtgtttgttcctttcttt 19120796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 19754606 - 19754676
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtt 72  Q
    ||||||||||||||||||||  || | ||||||||| |||||||||| ||||| |||||| |||| ||||||    
T  19754606 ttggagagatcaatctctccctcagattaggtcaag-ttggaccgaagtgggtcaacaatttttggtgtgtt 19754676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8871119 - 8871074
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaa 47  Q
    |||||||||||||||||||| |||||||||| |||| ||||||||||    
T  8871119 ttggagagatcaatctctcccccatagtaggccaag-ttggaccgaa 8871074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 37876819 - 37876767
Alignment:
Q  5 agagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||| ||||  ||||| ||| |||||||||||||||||    
T  37876819 agagatcaatctctcctccagagtacatcaag-ttgaaccgaactgggtgaaca 37876767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 3e-62; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 34254388 - 34254181
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||         ||||||     
T  34254388 ttggagagatcaatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttt 34254289  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||| | ||||||| |  |||||||||||    
T  34254288 tgcttgtggttt-gtgcttttctctttgattcctagattagatctaggtgctgttattgttgattattgcttgtgctcactttgatattggttactactt 34254190  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  34254189 tcctttgct 34254181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 42498305 - 42498513
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||         ||||||     
T  42498305 ttggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttccctcttctctccttttatcttt 42498404  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||| ||||||| ||||||| ||||||| |  |||| ||||||    
T  42498405 tgcttgtggttttgtgtttttcactttgattcctagattagatctaggtgttgttattgttaattattgcttgtgttcactttgatattggttgctactt 42498504  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  42498505 tcctttgct 42498513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 17982764 - 17982971
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         ||||| ||     
T  17982764 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatattt 17982863  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||  |  ||||||||| |    
T  17982864 tgcttgtgg-tttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgttattggttactacgt 17982962  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  17982963 tcctttgct 17982971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 34256564 - 34256357
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         ||||||||     
T  34256564 ttggagagatcaatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttt 34256465  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||| | ||||| | |  |||||||||||    
T  34256464 tgcttgtgg-tttgtgcttttctctttgattcctagattagatctaggtgctgttattgttgattattgcttgtgctcactttaatattggttactactt 34256366  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  34256365 tcctttgct 34256357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 4731769 - 4731976
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    ||||||||||| |||||||| ||| | | ||||||||| |||||||| ||||| ||||||||||| |||||||||| |||||||         ||||||     
T  4731769 ttggagagatcgatctctcccccagattcggtcaagtt-ggaccgaattgggtcaacaatctttggtgtgtttgttcctctcttctctccctttatcttt 4731867  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||    
T  4731868 tgcttgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgtttgtgttcactttgatatcggttactactt 4731967  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  4731968 tcctttgct 4731976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 15212897 - 15213104
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||||         ||||||     
T  15212897 ttggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgttcctctcttctctccctttatcttt 15212995  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||| |  |||||||||||    
T  15212996 tgcttgtggctttgtgcttttcactttgattcctagattagatcaaggtgctgttattgttgattattgtttgtgttcactttgatattggttactactt 15213095  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  15213096 tcctttgct 15213104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 1746276 - 1746072
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||         ||||| ||     
T  1746276 ttggagagttcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatcgttggtgtgtttgtttctctcttctctccttttatattt 1746177  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||| |||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||  |  |||||||||||    
T  1746176 tgcttgtgg-tttgcgcttttgactttgattcctagattagatctaggtgctgttattgttgattattgcttgtgttcactttgttattggttactactt 1746078  T
Q  192 tccttt 197  Q
    ||||||    
T  1746077 tccttt 1746072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 4 - 200
Target Start/End: Original strand, 31218371 - 31218575
Alignment:
Q  4 gagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttgtgc 94  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         ||||||||||||    
T  31218371 gagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttgtgc 31218470  T
Q  95 ttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcc 194  Q
    || | |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||  || ||||||  |  |||| |||||||||    
T  31218471 ttat-gttttgtgcttttcactttgtttcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgttattggttgctactttcc 31218569  T
Q  195 tttgct 200  Q
    ||||||    
T  31218570 tttgct 31218575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 44303966 - 44304173
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||| ||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||         ||||||     
T  44303966 ttggagagttcaatctctcctccagagtaggtcaagtttggatcgaactaggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttt 44304065  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||| |||||||||||||||||| ||| |||||||||||||| |||||||||||||||||| ||||| | ||||| | |  |||||||||||    
T  44304066 tgcttgtggttt-gtgcttttcactttgatttctagattagatctaggtgttgttattgttgattattgcttgtgctcactttaatattggttactactt 44304164  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  44304165 tcctttgct 44304173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 19945416 - 19945209
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    |||||||| ||||||||||||| | ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||         ||||| ||     
T  19945416 ttggagagttcaatctctcctcgagagtaggtcaagtttgaaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatattt 19945317  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||  || ||||||  |  |||||||||||    
T  19945316 tgcttgtgg-tttgtgcttttcacttcgattcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgttattggttactactt 19945218  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  19945217 tcctttgct 19945209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 5 - 197
Target Start/End: Original strand, 27811393 - 27811593
Alignment:
Q  5 agagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtt-------tctct--ctttatcttgtgct 95  Q
    |||||||||||||||| ||| | ||||||||||| |||||||||||||| ||||||||||| ||||||| ||       |||||  ||||||||| ||||    
T  27811393 agagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgttttttcccctcttctcttgctttatcttttgct 27811491  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||| |  |||||||||||||||    
T  27811492 tgtgattttgtgcttttcactttgattcctaaattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactttcct 27811591  T
Q  196 tt 197  Q
    ||    
T  27811592 tt 27811593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 40321191 - 40321393
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttct-----ctctttatcttgtgct 95  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| |||||||||||||||||||||||||     ||||||||||| ||||    
T  40321191 ttggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatctttgatgtgtttgtttctcttctctctttatcttttgct 40321289  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    |||||||||| |||||||||||||||| ||| |||||||||||||| ||||||| ||| || ||| ||||||||||||||| |  | || ||||||||||    
T  40321290 tgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattg-ttgttgcttgtgtttactttgatattgattgctactttcct 40321388  T
Q  196 ttgct 200  Q
    |||||    
T  40321389 ttgct 40321393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 33352261 - 33352468
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||         ||||||     
T  33352261 ttggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatctttgatgtgtttgttcctctcttatctccttttatcttt 33352359  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||| |||||| |||||||||||||| ||| ||||||| |||||| |||||||||||||||||| ||||||| ||||||| |  ||||| |||||    
T  33352360 tgcttgtggatttgtgtttttcactttgatttctagattagatttaggtgttgttattgttgattattgcttgtgttcactttgatattggttattactt 33352459  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  33352460 tcctttgct 33352468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 4743271 - 4743118
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgct 95  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||     |||||||||  |||    
T  4743271 ttggagagatcaatctctcccccaaagtaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtttctcttctctctttatctttcgct 4743173  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattg 150  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  4743172 tgtggttttgtgcttttcactttgattcctagattagatctaggtgttgttattg 4743118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 4 - 200
Target Start/End: Original strand, 6599086 - 6599283
Alignment:
Q  4 gagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgttt-gtttctct-----ctttatcttgtgcttg 97  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||| ||||||| ||||||||     ||||||||| | ||||    
T  6599086 gagagatcaatctctcccccatattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgttttgtttctcttctccctttatctttttcttg 6599184  T
Q  98 tggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttccttt 197  Q
    ||||||||||||||||||||||||| ||| |||||||||||||| |||||||    ||| ||||||||||| ||||||| |  |||||||||||||||||    
T  6599185 tggttttgtgcttttcactttgattactagattagatctaggtgttgttatt----attgttgtttgtgttcactttgatattggttactactttccttt 6599280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 4 - 200
Target Start/End: Original strand, 6674539 - 6674736
Alignment:
Q  4 gagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgttt-gtttctct-----ctttatcttgtgcttg 97  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||| ||||||| ||||||||     ||||||||| | ||||    
T  6674539 gagagatcaatctctcccccatattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgttttgtttctcttctccctttatctttttcttg 6674637  T
Q  98 tggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttccttt 197  Q
    ||||||||||||||||||||||||| ||| |||||||||||||| |||||||    ||| ||||||||||| ||||||| |  |||||||||||||||||    
T  6674638 tggttttgtgcttttcactttgattactagattagatctaggtgttgttatt----attgttgtttgtgttcactttgatattggttactactttccttt 6674733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 30143451 - 30143658
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||| ||| |  |||||||||| | || |||||| || ||||||||||| |||||||||| |||||||         ||||||     
T  30143451 ttggagagatcaatctctcccccagataaggtcaagtt-gaactgaactgagtcaacaatctttggtgtgtttgttcctctcttctctccctttatcttt 30143549  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||||||| |  |||||||||||    
T  30143550 tgcttgtggttttgagcttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactt 30143649  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  30143650 tcctttgct 30143658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 41366671 - 41366468
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgttt-gtttctctc------tttatcttgtg 93  Q
    |||||||||||||||||||| | | | ||||||||||| |||||||||||||  ||||||||||| ||||||| ||||||||       |||||||| ||    
T  41366671 ttggagagatcaatctctcc-ctagattaggtcaagtt-ggaccgaactgggacaacaatctttggtgtgttttgtttctcttctcccatttatcttttg 41366574  T
Q  94 cttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttc 193  Q
     |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||| ||||||||||||||| |  |||||||||||||    
T  41366573 tttgtggttttgtgcttttcactttgattcctatattagatctaggtgttgttattgttg-ttattgcttgtgtttactttgatattggttactactttc 41366475  T
Q  194 ctttgct 200  Q
    |||||||    
T  41366474 ctttgct 41366468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 200
Target Start/End: Original strand, 43036537 - 43036740
Alignment:
Q  4 gagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttgtgc 94  Q
    ||||||||||||||||||||| | ||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||||         |||||| |||    
T  43036537 gagagatcaatctctcctccagattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgttcctctcttctctccctttatcttttgc 43036635  T
Q  95 ttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcc 194  Q
    ||||||||||| ||||||||||||| || ||| |||||||||||||| |||| || ||| || ||| |||||||||||||||||  ||||||||||||||    
T  43036636 ttgtggttttgagcttttcactttggttactagattagatctaggtggtgttgttattg-ttgttgcttgtgtttactttgaaattggttactactttcc 43036734  T
Q  195 tttgct 200  Q
    ||||||    
T  43036735 tttgct 43036740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 5689382 - 5689585
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttct-----ctctttatcttgtgct 95  Q
    |||||||||||||||||||| ||| | | ||||||||| |||||||||||||| |||||||||||||||||||||||||     ||||||||||| | ||    
T  5689382 ttggagagatcaatctctcccccagatttggtcaagtt-ggaccgaactgggtcaacaatctttgatgtgtttgtttctcttctctctttatcttttact 5689480  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttg-tgtttactttgaaagcggttactactttcc 194  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| || ||||||| ||| || ||| ||| ||||| |||||| |  ||||||||||||||    
T  5689481 tgtggttttgagcttttcactttgattactaaattagatttagatgttgttattattg-ttgttgcttgttgtttgctttgatattggttactactttcc 5689579  T
Q  195 tttgct 200  Q
    ||||||    
T  5689580 tttgct 5689585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 200
Target Start/End: Complemental strand, 1345424 - 1345226
Alignment:
Q  5 agagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgcttgtg 99  Q
    |||| ||||||||||| ||| ||||||||||||| | |||||||| ||| ||||||||||| |||||||||||||||     ||||||||| ||||||||    
T  1345424 agagttcaatctctcccccagagtaggtcaagttag-accgaactaggtcaacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgtg 1345326  T
Q  100 gttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcctttgc 199  Q
     ||||| | |||||||||||||| ||| |||||||||||||| | ||||| ||| || ||||||||||||||||||| |  |||||||||||||||||||    
T  1345325 attttgagattttcactttgattactagattagatctaggtgttattattattg-ttgttgtttgtgtttactttgatattggttactactttcctttgc 1345227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 4733817 - 4734024
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    ||||||||||| |||||||| ||| | ||||||||||| |||||||||||||| |||| |||||| |||||||||| |||||||         ||||||     
T  4733817 ttggagagatcgatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacagtctttggtgtgtttgttcctctcttctctacctttatcttt 4733915  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    | ||||||||||||||||||||| |||| |||||| ||| |||||||||| |||||||||||||||||| ||||||| | ||||| |  |||||||||||    
T  4733916 tccttgtggttttgtgcttttcattttgtttcctacatttgatctaggtgttgttattgttgattattgcttgtgttcattttgatattggttactactt 4734015  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  4734016 tcctttgct 4734024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 76 - 200
Target Start/End: Complemental strand, 18106049 - 18105926
Alignment:
Q  76 ttctctctttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttg 175  Q
    ||||||||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||| ||||||||||| |||||| |||||||||||||     
T  18106049 ttctctctttatcttttgcttgtgattttgtgtttttcactttgattcctagattagatctaggtgatgttattgttg-ttattgcttgtgtttacttta 18105951  T
Q  176 aaagcggttactactttcctttgct 200  Q
    | |  ||||||||||||||||||||    
T  18105950 atattggttactactttcctttgct 18105926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 5 - 200
Target Start/End: Complemental strand, 3303723 - 3303521
Alignment:
Q  5 agagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgttt-----ctctctttatcttgtgcttgtg 99  Q
    |||||||||||||||| ||| ||||||||||||| |||||||||||||| ||||||||||| |||||||||||     ||||||||||||| ||||||||    
T  3303723 agagatcaatctctcccccacagtaggtcaagtt-ggaccgaactgggtaaacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgtg 3303625  T
Q  100 gttttgtgcttttcact----ttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
     |||||| |||||||||    |||||||||| ||||||||||||||  |||||| ||| || ||| ||||||||  ||||| |  |||||| ||||||||    
T  3303624 attttgtacttttcactttgattgattcctagattagatctaggtgtagttattattg-ttgttgcttgtgtttgttttgatattggttaccactttcct 3303526  T
Q  196 ttgct 200  Q
    |||||    
T  3303525 ttgct 3303521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 12702691 - 12702481
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||| | | | ||||||||||| |||||||||||||| ||||||||||| | ||||||||||||||||         |||||||    
T  12702691 ttggagagatcaatctctcccctagattaggtcaagtt-ggaccgaactgggtcaacaatctttggtatgtttgtttctctcttctctccctttatcttg 12702593  T
Q  92 tgcttgtggttttgtgcttttcactttga-ttcctaaattagatctaggt---gctgttattgttgattattgtttgtgtttactttgaaagcggttact 187  Q
    |||||||||||||||| |||||||||||| || ||| |||||||||||||   | ||||||| ||| || ||| ||||||||||||||| |  |||||||    
T  12702592 tgcttgtggttttgtgtttttcactttgattttctagattagatctaggtgtcgttgttattattg-ttgttgcttgtgtttactttgatattggttact 12702494  T
Q  188 actttcctttgct 200  Q
    |||||||||||||    
T  12702493 actttcctttgct 12702481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 12 - 200
Target Start/End: Complemental strand, 1292509 - 1292319
Alignment:
Q  12 aatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgcttgtggttttgt 106  Q
    ||||||||| ||| ||||||||||||| |||||||||||||  |||| |  ||| |||||||||||||||     | ||||||| |||| |||||||||     
T  1292509 aatctctcc-ccagagtaggtcaagtt-ggaccgaactgggcaaacatttcttggtgtgtttgtttctcttctctccttatcttttgctcgtggttttga 1292412  T
Q  107 gcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcctttgct 200  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||| ||| |  ||||||||||||||| |  | |||||||||| |||||||    
T  1292411 gcttttcactttgattcctagattagatctaggtgttgttattgttg-ttactacttgtgtttactttgatattgtttactacttttctttgct 1292319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 2627847 - 2628012
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct-ttgatgtgtttgttt---------ctctc--tttatc 88  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||| ||| |||||||         |||||  ||||||    
T  2627847 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaataatctcttggtgtctttgttttcctcttccctctccttttatc 2627946  T
Q  89 ttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgatt 156  Q
    |||||||||| ||||| |||||||||| ||| |||||| |||||||||||||| ||||||||||||||    
T  2627947 ttgtgcttgt-gttttatgcttttcac-ttgtttcctagattagatctaggtgttgttattgttgatt 2628012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 10015191 - 10015392
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgct 95  Q
    |||||||||| |||||||| |||||||||||||||||| |||||||||||||| | || |  ||| ||| |||||||||||     | ||||||| ||||    
T  10015191 ttggagagataaatctctc-tccatagtaggtcaagtt-ggaccgaactgggtaatcatttcttggtgtatttgtttctcttctctccttatcttttgct 10015288  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    ||||||||||  ||||||||||||||| |||||||||||||||||  ||||||| ||| || ||| ||||||| ||||||| |  ||||| |||||||||    
T  10015289 tgtggttttgaacttttcactttgattactaaattagatctaggtattgttattattg-tttttgcttgtgttcactttgatattggttattactttcct 10015387  T
Q  196 ttgct 200  Q
     ||||    
T  10015388 ctgct 10015392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 200
Target Start/End: Complemental strand, 19491752 - 19491553
Alignment:
Q  5 agagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct-ttgatgtgtttgtttctct-----ctttatcttgtgcttgt 98  Q
    |||||||||| ||||| |||||||||||||  || |||||||||| ||| |||||| | ||| ||||||||||||| |     ||||||||| || ||||    
T  19491752 agagatcaatatctcccccatagtaggtcatatt-ggaccgaactaggtcaacaatatcttggtgtgtttgtttcttttctcactttatcttttgtttgt 19491654  T
Q  99 ggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcctttg 198  Q
    ||||||| |||||| ||||||||||||| ||||||| |||||| ||||||||||| || ||  ||||||||||||||| |  | ||| ||||||||||||    
T  19491653 ggttttgagctttttactttgattcctagattagatataggtgttgttattgttg-ttgttacttgtgtttactttgatattgattaatactttcctttg 19491555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 18141931 - 18142105
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgttt-----ctctctttatcttgtgct 95  Q
    |||||||||||||||||||| | | | ||||||||| ||||||| |||||||  ||||  ||||| |||| ||||||     ||||||||||||| ||||    
T  18141931 ttggagagatcaatctctcccctagattaggtcaag-ttggaccaaactgggccaaca--ctttggtgtgcttgtttctctgctctctttatcttttgct 18142027  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttacttt 174  Q
    |||||||||| |||||||||||||||| ||| ||||||| |||||| ||||||| || ||| ||| |||||||||||||    
T  18142028 tgtggttttgagcttttcactttgattactagattagatgtaggtgttgttattatt-attgttgcttgtgtttacttt 18142105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 3073930 - 3073789
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca-atctttgatgtgtttgtttc-----tctctttatcttgtgc 94  Q
    |||||||||||||||||||| ||||||||||||||| |||| ||||||||||| ||||  ||| || ||||||||||||     |||||||||||| |||    
T  3073930 ttggagagatcaatctctcc-ccatagtaggtcaag-ttgggccgaactgggtaaacatttctatg-tgtgtttgtttctcttatctctttatcttttgc 3073834  T
Q  95 ttgtggttttgtgcttttcactttgattcctaaattagatctaggt 140  Q
    |||||||||||| || |||||||| ||||||| |||| ||||||||    
T  3073833 ttgtggttttgtactcttcacttt-attcctagattaaatctaggt 3073789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 30291718 - 30291856
Alignment:
Q  1 ttggagagatcaatctctcc-tccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttct-----ctctttatcttgtgc 94  Q
    |||||||||||||||||||| |||| | || | |||||| |||||||||||  | ||||||||||| |||||||||||||     ||||||||||| |||    
T  30291718 ttggagagatcaatctctccctccagattatgccaagtt-ggaccgaactgaatcaacaatctttggtgtgtttgtttctcttctctctttatcttttgc 30291816  T
Q  95 ttgtggttttgtgcttttcactttgattcctaaattagat 134  Q
    |||||||||||  |||| |||||||||| ||| |||||||    
T  30291817 ttgtggttttgaactttccactttgattactagattagat 30291856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3439614 - 3439675
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  3439614 ttggagagtacaatctctcctccagagtaggtcaagtttggaccgaactggatgaacaatct 3439675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25690065 - 25690126
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  25690065 ttggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 25690126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 18655514 - 18655567
Alignment:
Q  4 gagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  18655514 gagagatcaatctctcctccaaagtaggtcaag-ttggaccgaactgggtgaaca 18655567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 42435048 - 42434992
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  42435048 ttggagaaatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaaca 42434992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 42575381 - 42575320
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  42575381 ttggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatct 42575320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 149
Target Start/End: Complemental strand, 3051090 - 3051028
Alignment:
Q  87 tcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttatt 149  Q
    |||| |||||||||||||| |||||||||||| ||| ||| |||||||||||||| |||||||    
T  3051090 tcttatgcttgtggttttgagcttttcactttaatttctagattagatctaggtgttgttatt 3051028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4283635 - 4283691
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    ||||||||||||||||| |||| | ||||||||||| |||||||||||||||||||||    
T  4283635 ttggagagatcaatctcccctctagagtaggtcaag-ttggaccgaactgggtgaaca 4283691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15290635 - 15290688
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtg 54  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||    
T  15290635 ttggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtg 15290688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15471004 - 15471057
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtg 54  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||    
T  15471004 ttggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtg 15471057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 8965746 - 8965639
Alignment:
Q  3 ggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttg-----tttctctctttatcttgtgcttg 97  Q
    |||||||| ||||||||| ||||| ||||||||| |||||||||||||||| |||| |  | | ||||||||     |||||||||||||||| || |||    
T  8965746 ggagagataaatctctcccccatattaggtcaag-ttggaccgaactgggtaaacatttatcggtgtgtttgtttcttttctctctttatcttttgtttg 8965648  T
Q  98 tggttttgt 106  Q
    |||||||||    
T  8965647 tggttttgt 8965639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 40221856 - 40221919
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttg 65  Q
    |||||||||||||||||||| ||| | ||||||||| |||||||||||||||| || ||||||||    
T  40221856 ttggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaataatctttg 40221919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 10930256 - 10930198
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaat 60  Q
    |||||||||||||||||||| ||| | ||||||||| |||||||||||||||| ||||||    
T  10930256 ttggagagatcaatctctcccccagattaggtcaag-ttggaccgaactgggtcaacaat 10930198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 4162684 - 4162755
Alignment:
Q  101 ttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttga 176  Q
    ||||||| |||||||||||||||||| |||||||||||||  | |||||||||    ||||||||| |||||||||    
T  4162684 ttttgtgtttttcactttgattcctagattagatctaggttttattattgttg----ttgtttgtgattactttga 4162755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 7597726 - 7597866
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgt-----ttctctctttatcttgtgct 95  Q
    |||||||||||||||||||| |||||||||||||   || ||||||||||| | || | |  ||||||||  |||     ||||||||||||||| || |    
T  7597726 ttggagagatcaatctctcccccatagtaggtcattgttagaccgaactggataaatatttattgatgtgcgtgtttctcttctctctttatcttttgtt 7597825  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatcta 137  Q
    | | |||||||| ||| ||| ||| |||||||||||||||||    
T  7597826 tatcgttttgtgttttacac-ttggttcctaaattagatcta 7597866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11384096 - 11384152
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    ||||||| ||| |||||||||||| ||||||| ||| |||||||||||||||||||||    
T  11384096 ttggagacatcgatctctcctccagagtaggttaag-ttggaccgaactgggtgaaca 11384152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 11711975 - 11711911
Alignment:
Q  75 tttctctctttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggt 140  Q
    |||||||||||||| | || |||||||||| |||||| |||| | ||||||| |||||||||||||    
T  11711975 tttctctctttatcctttgtttgtggttttatgctttacactct-attcctatattagatctaggt 11711911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 32902152 - 32902096
Alignment:
Q  83 tttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggt 140  Q
    |||||||| ||||| |||||||||| ||||||||| | |||||| |||||||||||||    
T  32902152 tttatcttttgcttttggttttgtgtttttcacttgg-ttcctagattagatctaggt 32902096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 18106137 - 18106087
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggt 53  Q
    |||||||||||||||||||| ||| | ||||||||| ||||||||||||||||    
T  18106137 ttggagagatcaatctctcc-ccagaataggtcaag-ttggaccgaactgggt 18106087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 38863969 - 38864049
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct 81  Q
    ||||||||||||||||| ||| |||||||||| |   || |||||||||  || ||||||  ||||| |||||||||||||    
T  38863969 ttggagagatcaatctcccctgcatagtaggttattgttagaccgaactttgtaaacaattattgatttgtttgtttctct 38864049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 2e-57; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 5409126 - 5408920
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||         ||||||     
T  5409126 ttggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgg-tgaacaatctttggtgtgtttgtttctctcttctctccttttatcttt 5409028  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||| ||||||||| |||||||||||| |||||||||||||| |||||||||||||||||| ||||| | ||||||| |  |||||||||||    
T  5409027 tgcttgtggttt-gtgcttttctctttgattcctagattagatctaggtgttgttattgttgattattgcttgtgctcactttgatattggttactactt 5408929  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  5408928 tcctttgct 5408920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 5413451 - 5413245
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||         ||||||     
T  5413451 ttggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgg-tgaacaatctttggtgtgtttgtttctctcttctctccttttatcttt 5413353  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||| ||||||||| |||||||||||| |||||||||||||| |||||||||||||||||| ||||| | ||||||| |  |||||||||||    
T  5413352 tgcttgtggttt-gtgcttttctctttgattcctagattagatctaggtgttgttattgttgattattgcttgtgctcactttgatattggttactactt 5413254  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  5413253 tcctttgct 5413245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 31404732 - 31404525
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||         ||||||||     
T  31404732 ttggagagatcaatctctcctccagagtaggccaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttt 31404633  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||| |||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||| ||||| | ||||||| |  | |||||| ||    
T  31404632 tgcttgtgg-tttgtgctttcctctttgattcctagattagatctaggtgctgttattgttgattattgcttgtgctcactttgatattgattactattt 31404534  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  31404533 tcctttgct 31404525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 9183088 - 9182881
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgt-------ttctctc--tttatcttg 91  Q
    |||||||||||||||||||||||| | || |||||||| |||||||||||||| ||||||||||| |||||||||       |||||||  ||||||||     
T  9183088 ttggagagatcaatctctcctccagattatgtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtccctctcttctctccctttatcttt 9182990  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||||||| |  |||||||||||    
T  9182989 tgcttgtggttttgtacttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactt 9182890  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  9182889 tcctttgct 9182881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 16452386 - 16452181
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttat-ctt 90  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         |||||  ||    
T  16452386 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatattt 16452287  T
Q  91 gtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactact 190  Q
     ||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||| || ||||||  |  ||||||||||    
T  16452286 ttgcttgtgg-tttgtgcttttcactttgattcctagattagatctaggtgatgttattgttgattattgcttgtattcactttgttattggttactact 16452188  T
Q  191 ttccttt 197  Q
    |||||||    
T  16452187 ttccttt 16452181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 33211242 - 33211066
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgct 95  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||||||||| ||||||||||| | |||||||||||||     ||||||||| ||||    
T  33211242 ttggagagatcaatctctcccccagagtaggtcaagtt-ggaccgaactgggtcaacaatctttggtatgtttgtttctcttctctctttatcttttgct 33211144  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttacttt 174  Q
    |||||||||||| |||||||||||||||||| |||||||||||||| | ||||||||| |||||| |||||||||||||    
T  33211143 tgtggttttgtgattttcactttgattcctagattagatctaggtgttattattgttg-ttattgcttgtgtttacttt 33211066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 16569133 - 16569334
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttct-------ctctttatcttgtg 93  Q
    |||||||||||||||||||||||| | ||||||||||| |||||||||||||| ||||||||||| |||||||||||||       ||||||||||| ||    
T  16569133 ttggagagatcaatctctcctccagattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtttctctcttctctctttatcttttg 16569231  T
Q  94 cttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttc 193  Q
    |||||||||||| |||||||||||||||| ||| ||||||||||||||||| |||||||| |||||| ||| ||| |||||||    |||||||||||||    
T  16569232 cttgtggttttgagcttttcactttgatttctagattagatctaggtgctgctattgttg-ttattgcttgagttcactttgattttggttactactttc 16569330  T
Q  194 cttt 197  Q
    ||||    
T  16569331 cttt 16569334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 26954343 - 26954141
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----ctttatcttgtgct 95  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||||| ||| ||||||||||| ||  |||||||||||     |||||  || | ||    
T  26954343 ttggagagatcaatctctcccccaaagtaggtcaagtt-ggaccgaactaggtcaacaatctttggtgactttgtttctcttctctctttacatttttct 26954245  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  || ||||||||||||||  ||||||||||||| |    
T  26954244 tgtggttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttg-ttatttcttatgtttactttgaaattggttactactttctt 26954146  T
Q  196 ttgct 200  Q
    |||||    
T  26954145 ttgct 26954141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 33160409 - 33160201
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc----------tttatctt 90  Q
    |||||||||||||||||||||||| ||||  ||||||||||||| |||||||||||||||||||| ||||||||||||||||          ||||||||    
T  33160409 ttggagagatcaatctctcctccagagtatttcaagtttggaccaaactgggtgaacaatctttggtgtgtttgtttctctcttctctcctttttatctt 33160310  T
Q  91 gtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactact 190  Q
     || |||||||||||||||||||||||||||| ||| |||||||||||||| ||||| | ||| || ||| |||| ||||||||||||  |||||||| |    
T  33160309 ttgtttgtggttttgtgcttttcactttgattactagattagatctaggtgttgttaatattg-ttgttgcttgtatttactttgaaattggttactatt 33160211  T
Q  191 ttcctttgct 200  Q
    ||||||||||    
T  33160210 ttcctttgct 33160201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 30834593 - 30834384
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||         ||||| ||     
T  30834593 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaataatctttggtgtgtttgtttatctcttctctccttttatattt 30834494  T
Q  92 tgcttgtggttt-tgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactact 190  Q
    |||||||||||| |||  ||||||||||||||| || ||||||||||||||||||||||||||||||||| |||  || ||||||  |  |||||||| |    
T  30834493 tgcttgtggtttgtgtttttttcactttgattcatagattagatctaggtgctgttattgttgattattgcttgcattcactttgttattggttactatt 30834394  T
Q  191 ttcctttgct 200  Q
    ||||||||||    
T  30834393 ttcctttgct 30834384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 5406257 - 5406056
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||         ||||||||     
T  5406257 ttggagagatcaatctctcctccagagtaggtcaagtttgaaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttt 5406158  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    || |||||| |||||||||||| |||||||||||| |||||||||||||||   |||| |||||||||| ||||| | ||||| | |  |||||||||||    
T  5406157 tgtttgtgg-tttgtgcttttctctttgattcctagattagatctaggtgc---tattattgattattgcttgtgctcactttaatattggttactactt 5406062  T
Q  192 tccttt 197  Q
    | ||||    
T  5406061 ttcttt 5406056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 5410582 - 5410381
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||         ||||||||     
T  5410582 ttggagagatcaatctctcctccagagtaggtcaagtttgaaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttt 5410483  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    || |||||| |||||||||||| |||||||||||| |||||||||||||||   |||| |||||||||| ||||| | ||||| | |  |||||||||||    
T  5410482 tgtttgtgg-tttgtgcttttctctttgattcctagattagatctaggtgc---tattattgattattgcttgtgctcactttaatattggttactactt 5410387  T
Q  192 tccttt 197  Q
    | ||||    
T  5410386 ttcttt 5410381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 2171589 - 2171377
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct-ttgatgtgtttgtttctctc----------tttatct 89  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||| ||||||| ||||          |||||||    
T  2171589 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtttatctcttctctcccttttatct 2171490  T
Q  90 tgtgcttgtggttt-tg-tgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttact 187  Q
    |||||||||| ||| || |  |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||     ||||||  || |||||||    
T  2171489 tgtgcttgtgttttatgttttttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgcacacactttgttagtggttact 2171390  T
Q  188 actttcctttgct 200  Q
    |||||||||||||    
T  2171389 actttcctttgct 2171377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 28137465 - 28137261
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgttt-gttt------ctctctttatcttgtg 93  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||| || ||||||| |  ||| | ||||| ||||      ||| ||||||||| ||    
T  28137465 ttggagagatcaatctctcccccagagtaggtcaagtt-ggaccgaattgtgtgaacatttcttggtatgttttgttttatcttctccctttatcttttg 28137367  T
Q  94 cttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttc 193  Q
    ||||||||| ||||||||||||||||||||||| |||||||||| ||| ||||||||| | |||||| ||||||||||||||| |  |||||||||||||    
T  28137366 cttgtggttatgtgcttttcactttgattcctatattagatctatgtgttgttattgtcg-ttattgcttgtgtttactttgatattggttactactttc 28137268  T
Q  194 ctttgct 200  Q
    |||||||    
T  28137267 ctttgct 28137261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 3072816 - 3072607
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct-ttgatgtgtttgttt---------ctctc--tttatc 88  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||| |||||||         |||||  ||||||    
T  3072816 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcctcttccctctccttttatc 3072717  T
Q  89 ttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttacta 188  Q
    |||||||||| ||||| |||||||||| ||| |||||| |||||||||| ||||| || ||||||||||||| |||     ||||||  || ||||||||    
T  3072716 ttgtgcttgt-gttttatgcttttcac-ttgtttcctagattagatctatgtgctatttttgttgattattgcttgcacacactttgttagtggttacta 3072619  T
Q  189 ctttcctttgct 200  Q
    ||||||||||||    
T  3072618 ctttcctttgct 3072607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 14521656 - 14521543
Alignment:
Q  75 tttctctctttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttacttt 174  Q
    |||||| ||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||| |||| || ||| || ||| |||||||||||||    
T  14521656 tttctcactttatcttatgcttgtggttttgagcttttcactttgattcctagattagatctaggtgttgttgttattg-ttgttgcttgtgtttacttt 14521558  T
Q  175 gaaagcggttactac 189  Q
    ||||  |||||||||    
T  14521557 gaaattggttactac 14521543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6097508 - 6097447
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6097508 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 6097447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 3038927 - 3038828
Alignment:
Q  55 aacaatctttgatgtgtttgtttct-----ctctttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttatt 149  Q
    ||||||||||| |||||||||||||     ||||||||||| ||||||||||||||  ||||||||||||||| ||| |||||||||||||| |||||||    
T  3038927 aacaatctttggtgtgtttgtttcttttctctctttatcttttgcttgtggttttgaacttttcactttgattactatattagatctaggtgttgttatt 3038828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 412216 - 412274
Alignment:
Q  4 gagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  412216 gagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 412274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25421417 - 25421478
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25421417 ttggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 25421478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3808765 - 3808704
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||||| ||||||||||||    
T  3808765 ttggagagatcaatctctcctccagagtaggtcatgattggaccgaactaggtgaacaatct 3808704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5043738 - 5043795
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  5043738 ttggagagatcaatctctcctccatagtaggtcattgttggaccgaactgggtgaaca 5043795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6027358 - 6027419
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  6027358 ttggagagtacaatctctcctccagagtatgtcaagtttggaccgaactgggtgaacaatct 6027419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16554980 - 16555041
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  16554980 ttggagagtgcaaactctcctccaaagtaggtcaagtttggaccgaactgggtgaacaatct 16555041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16578575 - 16578514
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  16578575 ttggagagtgcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 16578514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16616805 - 16616866
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  16616805 ttggagagtgcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 16616866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16631536 - 16631597
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  16631536 ttggagagtgcaaactctcctccaaagtaggtcaagtttggaccgaactgggtgaacaatct 16631597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16653223 - 16653284
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  16653223 ttggagagtgcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 16653284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21589042 - 21589098
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  21589042 ttggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaaca 21589098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21593775 - 21593831
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  21593775 ttggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaaca 21593831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34167191 - 34167252
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  34167191 ttggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 34167252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13154026 - 13154087
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  13154026 ttggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatct 13154087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17763101 - 17763158
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||||||| ||||||||    
T  17763101 ttggagtgatcaatctctcctccagagtagatcaagtttggaccgaactaggtgaaca 17763158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 26830180 - 26830124
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||    
T  26830180 ttggagagatcaatctctcctccaaagtaggtcaagttt-gactgaactgggtgaaca 26830124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 27647971 - 27648032
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| ||||| |||||||||||||||||||||||||||||||    
T  27647971 ttggagagtacaaactctcctccagagtagatcaagtttggaccgaactgggtgaacaatct 27648032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 33342162 - 33342101
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  33342162 ttggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatct 33342101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 34164969 - 34165030
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  34164969 ttggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatct 34165030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17758134 - 17758191
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    ||||||||||||||||| |||| | ||||| |||||||||||||||||| ||||||||    
T  17758134 ttggagagatcaatctcccctctagagtagttcaagtttggaccgaactaggtgaaca 17758191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26800698 - 26800755
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| |||||||||   |||||||||||||| ||||||    
T  26800698 ttggagagatcaatctctcctccagagtaggtcattgttggaccgaactggatgaaca 26800755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2972996 - 2972940
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||| | ||||||||||| || ||||||||| ||||||||    
T  2972996 ttggagagatcaatctctcctcaagagtaggtcaag-ttcgaccgaactaggtgaaca 2972940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 22424883 - 22424826
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    ||||||||||||||||||||| || |||||||||   |||||||| ||||||||||||    
T  22424883 ttggagagatcaatctctccttcagagtaggtcattgttggaccgtactgggtgaaca 22424826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 603145 - 603085
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||| |||||||||||| | | | ||||||||||| |||||||||||||| ||||||||    
T  603145 ttggagaaatcaatctctccccaagattaggtcaagtt-ggaccgaactgggtcaacaatct 603085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 4045608 - 4045671
Alignment:
Q  76 ttctctctttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggt 140  Q
    ||||||||||||||| | || ||||||||||  ||||||| ||||||| || |||||||||||||    
T  4045608 ttctctctttatcttttactcgtggttttgtttttttcac-ttgattcttagattagatctaggt 4045671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 1e-55; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 13239862 - 13240066
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||         ||||||||     
T  13239862 ttggagagatcaatctctcctccagagtaggtcaaatttggaccgaactgggtgaacaatttttggtgtgtttgtttctctcttctctccttttatcttt 13239961  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||| ||||||||||| || ||| ||||||||||||| |||  |||||||||||    
T  13239962 tgcttgtggttttgtgtttttcactttgattactagattagatctaggtgttgttattgttg-ttgttgcttgtgtttactttaaaattggttactactt 13240060  T
Q  192 tccttt 197  Q
    ||||||    
T  13240061 tccttt 13240066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 13343171 - 13343378
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||         ||||| ||     
T  13343171 ttggagagttcaatctctcctccagagtaggtcatgtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctcttctctccttttatattt 13343270  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||  || ||||||  |  |||||||||||    
T  13343271 tgcttgtgg-tttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgcattcactttgttattggttactactt 13343369  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  13343370 tcctttgct 13343378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 30182699 - 30182906
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||         |||||||    
T  30182699 ttggagagttcaatctctcctccagagtatgtcaagtttggaccgaactggatgaacaatctttggtgtgtttgtttctctcttctctccttttatcttg 30182798  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||  || ||||||  |  |||||||||||    
T  30182799 tgcttgtg-ttttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgtttgcattcactttgttattggttactactt 30182897  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  30182898 tcctttgct 30182906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 37439252 - 37439450
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct---------ctttatcttg 91  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||         |||||||||     
T  37439252 ttggagagatcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccctttatctta 37439351  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||||||||||||||||| ||||||| ||| |||||| ||||||| ||||||| ||| || ||| |||||||||||||||||  |||||||||||    
T  37439352 tgcttgtggttttgtgcttttcattttgattactagattagacctaggtgttgttattattg-ttgttgcttgtgtttactttgaaattggttactactt 37439450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 25412871 - 25413078
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||         ||||||||     
T  25412871 ttggagagatcaatctctcctccagagtaggtcaagtttggactgaactgggtgaacaatctttggtgtgtttgtttctctcttctctccttttatcttt 25412970  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||| |||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||| ||||| | |||| || |  | |||||| ||    
T  25412971 tgcttgtgg-tttgtgcttttctctttgattcctagattagatataggtgctgttattgttgattattgcttgtgctcacttggatattgattactaatt 25413069  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  25413070 tcctttgct 25413078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 4 - 200
Target Start/End: Complemental strand, 39468603 - 39468399
Alignment:
Q  4 gagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttgtgc 94  Q
    ||||||||||||||||| ||||| ||||| || || |||| ||||||||| ||||||||||  |||||||||| |||||||         ||||||||||    
T  39468603 gagagatcaatctctcccccatattaggttaaatt-ggactgaactgggtcaacaatctttagtgtgtttgttcctctcttctctccctttatcttgtgc 39468505  T
Q  95 ttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcc 194  Q
    | |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |  ||||||||||||||    
T  39468504 tcgtggttttgtgcttttcactttgatttctagattagatctaggtgctgttattgttgattattgtttgtgttcactttgatattggttactactttcc 39468405  T
Q  195 tttgct 200  Q
    ||||||    
T  39468404 tttgct 39468399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 36074100 - 36073893
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc---------tttatcttg 91  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||         ||||| ||     
T  36074100 ttggagagttcaatctctcctccaaagtaggtcaagtttggaccgaactggatgaacaatctttggtgtgtttgtttctctcttctctccttttatgttt 36074001  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||  || ||||||  |  ||||| |||||    
T  36074000 tgcttgt-gatttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattgcttgcattcactttgttattggttattactt 36073902  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  36073901 tcctttgct 36073893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 538136 - 538338
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgt-----ttctctctttatcttgtgct 95  Q
    |||||||||||||||||||| ||||| ||||||||| |||||||||||||| | ||||||||||| ||||||| |     ||||||||||||||| ||||    
T  538136 ttggagagatcaatctctcccccatattaggtcaag-ttggaccgaactggatcaacaatctttggtgtgtttctttctcttctctctttatcttttgct 538234  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    |||||||||| |||||||||||||||| ||| ||||||||||| || ||||||| ||| || ||| |||||||||||||||||  ||||| |||||||||    
T  538235 tgtggttttgagcttttcactttgattactagattagatctagatgttgttattattg-ttgttgcttgtgtttactttgaaattggttattactttcct 538333  T
Q  196 ttgct 200  Q
    |||||    
T  538334 ttgct 538338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 30682979 - 30682773
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||| | ||||||||||| |||||||||| |||||||         ||||||     
T  30682979 ttggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgg-tcaacaatctttggtgtgtttgttcctctcttctctccttttatcttt 30682882  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||  ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||||||| |  |||||||||||    
T  30682881 tgcttgtgaatttgtgcttttcactttgattcctagattagatctaggtgttgttattgttgattattgcttgtgttcactttgatattggttactactt 30682782  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  30682781 tcctttgct 30682773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 42428487 - 42428281
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtt---------tctctctttatcttg 91  Q
    |||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||  ||||||||||         |||| |||||||||     
T  42428487 ttggagagatcaatctctcccccatattaggtcaagtt-ggaccgaactgggtcaacaatctttagtgtgtttgttcttcttttctctccctttatcttt 42428389  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||||| |||||||||||||||| ||| |||||||||||||| ||||||| || ||| ||| ||||||| ||||||| |  |||||||||||    
T  42428388 tgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattatt-attgttgcttgtgttcactttgatattggttactactt 42428290  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  42428289 tcctttgct 42428281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 16409586 - 16409797
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaa--tctttgatgtgtttgttt---------ctctc--tttat 87  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||| ||| |||||||         |||||  |||||    
T  16409586 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccctctccttttat 16409685  T
Q  88 cttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttact 187  Q
    ||||||||||| ||||| |||||||||||||| |||||| |||||||||||||| |||||||||||||||||| |||     ||||||  || |||||||    
T  16409686 cttgtgcttgt-gttttatgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcacccactttgttagtggttact 16409784  T
Q  188 actttcctttgct 200  Q
    |||||||||||||    
T  16409785 actttcctttgct 16409797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 32636935 - 32637138
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct---------ctttatcttg 91  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||         ||||||||||    
T  32636935 ttggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtgtttgtttctctcttccctccctttatcttg 32637033  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||| ||||| | |||||||||||||| ||| |||||||||||||| ||||||| |||| | ||| ||||||||| | |||||   ||||||||||    
T  32637034 tgcttgtgattttgagtttttcactttgattactagattagatctaggtgttgttattattga-tgttgcttgtgtttagtgtgaaatttgttactactt 32637132  T
Q  192 tccttt 197  Q
    ||||||    
T  32637133 tccttt 32637138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 33831795 - 33831996
Alignment:
Q  5 agagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt-------tatcttgtgcttg 97  Q
    |||||||||||||||| ||||| ||||||||||| |||| ||||||||| ||||||||||| ||| ||||||||||||||       |||||| ||||||    
T  33831795 agagatcaatctctcccccatattaggtcaagtt-ggactgaactgggtcaacaatctttggtgtttttgtttctctcttctctctttatcttttgcttg 33831893  T
Q  98 tggttttgtgctttt-cactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcctt 196  Q
    ||| |||| |||||| |||||||||||||| ||||||| ||||||||| |||||||| |||||| ||||||| |||||||    ||||||||||||||||    
T  33831894 tggctttgagctttttcactttgattcctagattagatttaggtgctgctattgttg-ttattgcttgtgttcactttgattttggttactactttcctt 33831992  T
Q  197 tgct 200  Q
    ||||    
T  33831993 tgct 33831996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 28750712 - 28750506
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||| ||||| || |||||||| |||||||||| |||||||         ||| ||     
T  28750712 ttggagagatcaatctctcccccagattaggtcaagtt-ggaccgaattgggtcaataatctttggtgtgtttgttcctctcttctctccctttatattt 28750614  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||||||||||||||||| |||| ||| |||||||||||||| ||||||| ||| || ||| ||||||||||||| |||  |||||||||||    
T  28750613 tgcttgtggttttgtgcttttcacttggattactagattagatctaggtgttgttattattg-ttgttgcttgtgtttactttaaaattggttactactt 28750515  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  28750514 tcctttgct 28750506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 26177993 - 26178204
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaa--tctttgatgtgtttgttt---------ctctc--tttat 87  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||| ||| |||||||         |||||  |||||    
T  26177993 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccctctccttttat 26178092  T
Q  88 cttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttact 187  Q
    ||||||||||| ||||| ||||||||||||||||||||| |||||||||||||| ||||||  |||||||||| |||     ||||||  || |||||||    
T  26178093 cttgtgcttgt-gttttatgcttttcactttgattcctagattagatctaggtgttgttatcattgattattgcttgcacacactttgttagtggttact 26178191  T
Q  188 actttcctttgct 200  Q
    |||||||||||||    
T  26178192 actttcctttgct 26178204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 8566003 - 8565798
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgttt------ctctctttatcttgtgc 94  Q
    |||||||||||||||||||  ||| | ||||||||||| |||||||||| ||| ||||||||| | |||||||||||      ||||||||||||| |||    
T  8566003 ttggagagatcaatctctcacccagattaggtcaagtt-ggaccgaactaggtcaacaatcttgg-tgtgtttgttttctcttctctctttatcttttgc 8565906  T
Q  95 ttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgt---ttgtgtttactttgaaagcggttactactt 191  Q
    ||||||||||| |||||||||||||||| ||| |||||||||||||| ||||||| || ||| ||||   ||||||| ||||||  |  |||||||||||    
T  8565905 ttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattatt-attgttgttgcttgtgttcactttgttattggttactactt 8565807  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  8565806 tcctttgct 8565798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 42426292 - 42426086
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||| ||  | ||||||||||| |||| ||||| ||| ||||||||||  |||||||||| |||||||         ||||||     
T  42426292 ttggagagatcaatctctccccctgattaggtcaagtt-ggactgaactaggtcaacaatcttttgtgtgtttgttcctctcttctctccctttatcttt 42426194  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||||| |||||||||||||||| ||| |||||||||||||| ||||||| |||| | ||| ||||||| ||||||| |  |||||||||||    
T  42426193 tgcttgtggttttgagcttttcactttgattactagattagatctaggtgttgttattattga-tgttgcttgtgttcactttgatattggttactactt 42426095  T
Q  192 tcctttgct 200  Q
    || ||||||    
T  42426094 tcttttgct 42426086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 19806474 - 19806679
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtt---------tctctctttatcttg 91  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| |||||||||||  |||||||||         |||| |||||||||     
T  19806474 ttggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatctttggggtgtttgttcctctcttctctccctttatcttt 19806572  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||||  |||||||||||||||| ||| ||||||| |||||| ||||||| |||  |||||  | |||| ||||| |||  |||||||||||    
T  19806573 tgcttgtggtttttagcttttcactttgattactagattagatttaggtgttgttattattg-ctattgcctatgttcactttaaaattggttactactt 19806671  T
Q  192 tcctttgc 199  Q
    ||||||||    
T  19806672 tcctttgc 19806679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 26170873 - 26171032
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaa--tctttgatgtgtttgttt---------ctctc--tttat 87  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||| ||| |||||||         |||||  |||||    
T  26170873 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccctctccttttat 26170972  T
Q  88 cttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttat 148  Q
    ||||||||||| ||||| ||||||||| ||||||||||| |||||||||||||| ||||||    
T  26170973 cttgtgcttgt-gttttatgcttttcattttgattcctagattagatctaggtgttgttat 26171032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 533880 - 534076
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttg-----tttctctctttatcttgtgct 95  Q
    ||||| |||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||| ||| ||||      |||||| |||||||| ||||    
T  533880 ttggaaagatcaatctctcccccatattaggtcaagtt-ggaccgaactgggtcaacaatctttggtgtctttgcttctcttctctttttatcttttgct 533978  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcct 195  Q
    |||||||||| | |||||||||||||| ||| ||      |||||| ||||||| || ||| ||| |||||| ||||||||||  |||||||||||||||    
T  533979 tgtggttttgagattttcactttgattactagat------taggtgttgttattatt-attgttgcttgtgtctactttgaaattggttactactttcct 534071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 13488314 - 13488515
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt-------tatcttgtg 93  Q
    |||||||||||||||||||| | | | ||||||||||| |||||||||||||| || |||||||  ||| |||||| |||||||       | |||| ||    
T  13488314 ttggagagatcaatctctccccgagattaggtcaagtt-ggaccgaactgggtcaataatcttttgtgtctttgttcctctcttctctccctttcttttg 13488412  T
Q  94 cttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttc 193  Q
    |||||||||||| | |||||||||||||| ||| |||||||||||||| ||||||| |||  ||||| ||||||| |||||||||  ||||| |||||||    
T  13488413 cttgtggttttgagtttttcactttgattactagattagatctaggtgttgttattattg-ctattgattgtgttcactttgaaattggttattactttc 13488511  T
Q  194 cttt 197  Q
    ||||    
T  13488512 cttt 13488515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 16649851 - 16649685
Alignment:
Q  38 ttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt-----tatcttgtgcttgtggttttgtgcttttcactttgattcctaaattag 132  Q
    ||||||| |||| ||| ||||||| ||| ||||||||||||||| ||     |||||| ||||||||||||||||||||||||||||||| ||| |||||    
T  16649851 ttggaccaaactaggtcaacaatccttggtgtgtttgtttctcttttccgtttatcttttgcttgtggttttgtgcttttcactttgattactagattag 16649752  T
Q  133 atctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcctttgct 200  Q
    ||||||||| ||||||| |||  || |  ||||||| |||||||  | ||||||||||||||||||||    
T  16649751 atctaggtgttgttattattg-ctactacttgtgttcactttgattgtggttactactttcctttgct 16649685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 31183082 - 31183291
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgt-------ttctctctttatctt--- 90  Q
    ||||||||||| |||||||| ||||| ||||||||||| |||||||||||||| |||| |||||| |||||||||       |||||||||||||||       
T  31183082 ttggagagatctatctctcccccatattaggtcaagtt-ggaccgaactgggtcaacattctttggtgtgtttgtttctctcttctctctttatcttttg 31183180  T
Q  91 --gtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttacta 188  Q
       |||||||||||||| |||||||||||||||| ||| ||||||| |||||| ||||||| ||  || ||| |||||||  |||||| |   |||||||    
T  31183181 aattgcttgtggttttgagcttttcactttgattactagattagatataggtgttgttattatt-tttgttgcttgtgttccctttgatattagttacta 31183279  T
Q  189 ctttcctttgct 200  Q
    ||||||||||||    
T  31183280 ctttcctttgct 31183291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 23 - 200
Target Start/End: Original strand, 42927024 - 42927210
Alignment:
Q  23 catagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-----------ctttatcttgtgcttgtggttttgtgcttt 111  Q
    |||||||||||||||| |||||||||||||| |||| |  ||| |||||||||||||||           ||||  ||| |||||||||||||| | |||    
T  42927024 catagtaggtcaagtt-ggaccgaactgggtaaacatttcttggtgtgtttgtttctcttatctccttatcttttgcttttgcttgtggttttgagtttt 42927122  T
Q  112 tcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcctttgct 200  Q
    ||||||||||||||| |||||||||||||| ||||||||||| || ||| ||||||||||||||| |   ||| |||||||||||||||    
T  42927123 tcactttgattcctagattagatctaggtgttgttattgttg-ttgttgcttgtgtttactttgatattagttgctactttcctttgct 42927210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 213576 - 213633
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  213576 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 213633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 6 - 200
Target Start/End: Complemental strand, 5887486 - 5887285
Alignment:
Q  6 gagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt-------tatcttgtgctt-- 96  Q
    |||||| |||||||| ||| | ||||||||||| |||||||| ||| | ||||||||||| ||||||||||||||||||       |||||| |||||      
T  5887486 gagatctatctctcccccagattaggtcaagtt-ggaccgaattggatcaacaatctttggtgtgtttgtttctctcttctctctttatcttttgctttt 5887388  T
Q  97 gtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactttcctt 196  Q
    ||||||||  | |||||| ||||||| ||| ||||||| |||||| ||||||| ||| || ||| ||||||| ||||||| |  ||||||||||||||||    
T  5887387 gtggttttaagtttttcattttgattactagattagatttaggtgttgttattattg-ttgttgcttgtgttcactttgatattggttactactttcctt 5887289  T
Q  197 tgct 200  Q
    ||||    
T  5887288 tgct 5887285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 9789281 - 9789116
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaa--tctttgatgtgtttgttt---------ctctc--tttat 87  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||| ||| |||||||         |||||  |||||    
T  9789281 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccctctccgtttat 9789182  T
Q  88 cttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgatt 156  Q
    ||||||||||| || ||||| ||||||| ||  |||||| ||||||||||||||||||| |||||||||    
T  9789181 cttgtgcttgt-gtattgtgtttttcac-ttctttcctagattagatctaggtgctgtt-ttgttgatt 9789116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 28278427 - 28278510
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctcttt 85  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||  ||| ||||||| ||||| |||||    
T  28278427 ttggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaacaattcttggtgtgtttctttctttcttt 28278510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 16452191 - 16452350
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct-------ctttatcttgt- 92  Q
    |||||||||| ||||||||| ||| ||||||||||||| |||||||||||||| |||| |  ||| ||||||||||| |||       |||||| || |     
T  16452191 ttggagagataaatctctcccccagagtaggtcaagtt-ggaccgaactgggtaaacatttcttggtgtgtttgtttatcttctcttcctttattttttt 16452289  T
Q  93 gcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttg 153  Q
    ||||||||||||| |||||||| ||||||||||| ||||||||||  || |||||||||||    
T  16452290 gcttgtggttttgagcttttcaatttgattcctagattagatctaactgttgttattgttg 16452350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10593369 - 10593430
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10593369 ttggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 10593430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18441705 - 18441644
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    |||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  18441705 ttggagagttcaatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatct 18441644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25078232 - 25078293
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25078232 ttggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 25078293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25136201 - 25136262
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25136201 ttggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 25136262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29751217 - 29751156
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29751217 ttggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 29751156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40380202 - 40380263
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    |||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  40380202 ttggagagttcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 40380263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 40382413 - 40382474
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    |||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  40382413 ttggagagttcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 40382474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 9049399 - 9049285
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctttatcttgtgcttgtgg 100  Q
    |||||||||||||| ||||| ||| ||||||| ||||| |||||||| ||| | |||| | |||| ||||||||||||||| | |||||| |||||||||    
T  9049399 ttggagagatcaatatctcccccaaagtaggtgaagtt-ggaccgaaatggataaacattttttggtgtgtttgtttctct-tctatcttttgcttgtgg 9049302  T
Q  101 ttttgtgcttttcactt 117  Q
    ||||||| |||||||||    
T  9049301 ttttgtgtttttcactt 9049285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 22536337 - 22536286
Alignment:
Q  11 caatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22536337 caatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatct 22536286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29720475 - 29720536
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  29720475 ttggagagtacaatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatct 29720536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29722635 - 29722696
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  |||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  29722635 ttggagagtacaatctctcctccagagtaggtcaaatttggaccgaactgggtgaacaatct 29722696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 40147372 - 40147428
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  40147372 ttggagagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtgaaca 40147428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5058156 - 5058212
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||    
T  5058156 ttggagagatcaatctctcctctagagtaggtcaag-ttggaccgaactgggtgaaca 5058212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16544520 - 16544581
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  16544520 ttggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatct 16544581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16546742 - 16546803
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| |||||||||||||||||||||||||||||| ||||||    
T  16546742 ttggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaccaatct 16546803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 3075715 - 3075636
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct 81  Q
    ||||||||||||||||||||  |||||||||||||| ||||||| || |||||||||| |  ||| |||||||||||||||    
T  3075715 ttggagagatcaatctctccctcatagtaggtcaag-ttggaccaaattgggtgaacatttcttggtgtgtttgtttctct 3075636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 27015640 - 27015704
Alignment:
Q  7 agatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtt 72  Q
    |||||||||||||||||| | ||||||||| ||||||||||||||||||||| | |||| ||||||    
T  27015640 agatcaatctctcctccaaaataggtcaag-ttggaccgaactgggtgaacattttttggtgtgtt 27015704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 27637670 - 27637615
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaa 56  Q
    ||||||||||||||||||||| || |||||||||   |||||||||||||||||||    
T  27637670 ttggagagatcaatctctcctgcagagtaggtcattgttggaccgaactgggtgaa 27637615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 16640997 - 16640941
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||||||| ||||||||||| | || ||||||||||| ||||    
T  16640997 ttggagagatcaatctctcctccagagtaggtcaag-tagggccgaactgggtaaaca 16640941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 4160710 - 4160762
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggt 53  Q
    |||||||||||||||||||||||| |||||||||   ||||||| ||||||||    
T  4160710 ttggagagatcaatctctcctccagagtaggtcattgttggaccaaactgggt 4160762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 10281776 - 10281729
Alignment:
Q  38 ttggaccgaactgggtgaacaatctttgatgtgtttgtttctctcttt 85  Q
    |||||||||||||||| ||||||||||| |||||||||| || |||||    
T  10281776 ttggaccgaactgggtcaacaatctttggtgtgtttgttcctttcttt 10281729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 13695744 - 13695668
Alignment:
Q  4 gagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctct 81  Q
    ||||||| | ||||||||||||||||||||||  ||||||| |||| ||| |||| |  ||| |||||||||||||||    
T  13695744 gagagattattctctcctccatagtaggtcaa-cttggaccaaactaggtaaacatttcttggtgtgtttgtttctct 13695668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 107; Significance: 8e-54; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 434644 - 434812
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc----------tttatctt 90  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||          ||||||||    
T  434644 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatatttggtgtgtttgtttctctcttctctcccttttatctt 434743  T
Q  91 gtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattg 160  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  434744 gtgcttgt-gttttgtgcttttcactttgattcctagattagatctaggtgctgttattgttgattattg 434812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 114713 - 114921
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||||||| |||| |||||||||||||         ||||||     
T  114713 ttggagagatcaatctctcctccagagtaggttaagtttagaccgaactggatgaacaatctttggtgtgcttgtttctctcttctctccttttatcttt 114812  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    | ||||| ||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||| ||||||| ||||||| |  ||||| |||||    
T  114813 ttcttgttgttttgtgcttttcactttgattcctagattagatataggtgttgttattgttgattattgattgtgttcactttgatattggttattactt 114912  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  114913 tcctttgct 114921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 20472 - 20265
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctctt---------tatcttg 91  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||||||||| |||||| |||| |||||||||| |||||||         ||||||     
T  20472 ttggagagatcaatctctcccccagattaggtcaagtt-ggaccgaactgggtcaacaatttttggtgtgtttgttcctctcttctctccctttatcttt 20374  T
Q  92 tgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggttactactt 191  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||| ||||||| |  ||||||||| |    
T  20373 tgcttgtggttttgtgtttttcactttgattcctagattagatctaggtgctgttattgttaattattgcttgtgttcactttgacattggttactacct 20274  T
Q  192 tcctttgct 200  Q
    |||||||||    
T  20273 tcctttgct 20265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 89; Significance: 4e-43; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 8792 - 8623
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgtttctctc-----------tttatct 89  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||  |||           |||||||    
T  8792 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtctttgttttcctcttccctcttcttttatct 8693  T
Q  90 tgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattg 160  Q
    ||||||||||| |||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||    
T  8692 tgtgcttgtgg-tttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattg 8623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 11218 - 11049
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgttt---------ctctc--tttatct 89  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||         |||||  |||||||    
T  11218 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtctttgttttcctcttccctctccttttatct 11119  T
Q  90 tgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattg 160  Q
    ||||||||||| |||||| ||||||||||| |||||| |||||||||||||| ||||||||||||||||||    
T  11118 tgtgcttgtgg-tttgtgtttttcactttgtttcctagattagatctaggtgttgttattgttgattattg 11049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 1026 - 1194
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtg-tttgtttctctc---------tttatctt 90  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||         |||||  |    
T  1026 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgttttgtttctctcttctctccttttatact 1125  T
Q  91 gtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattgttgattattg 160  Q
     ||||||||| |||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||    
T  1126 ttgcttgtgg-tttgtgcttttcactttgatacctagattagatctaggtggtgttattgttgattattg 1194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 149154 - 149002
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgttt-----ctctctttatcttgtgct 95  Q
    |||||||||||||||||||| ||| ||||||| ||||| |||||||||||||| ||||||||||| ||| |||||||     ||||||||||||| ||||    
T  149154 ttggagagatcaatctctcccccagagtaggttaagtt-ggaccgaactgggtcaacaatctttggtgtatttgtttctcttctctctttatcttttgct 149056  T
Q  96 tgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttattg 150  Q
    ||||||||||| ||||||| ||||||||||| ||||||| |||||| ||||||||    
T  149055 tgtggttttgtacttttca-tttgattcctagattagatttaggtgttgttattg 149002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 11668 - 11884
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct-ttgatgtgtttgtttctctc----------tttatct 89  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||| ||||||| ||||          |||||||    
T  11668 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgtttatctcttctctcccttttatct 11767  T
Q  90 tgtgcttgtggttttgtgctttt----cactttg-attcctaaattag-atctaggtgctgttattgttgattattgtttgtgtttactttgaaagcggt 183  Q
    |||||||||| |||  || ||||    ||||||| ||||||| ||||| |||||||||||||||||||||||||||| |||     ||||||  || |||    
T  11768 tgtgcttgtgttttattgttttttttccactttgtattcctagattagtatctaggtgctgttattgttgattattgcttgcacacactttgttagtggt 11867  T
Q  184 tactactttcctttgct 200  Q
    |||||||||||||||||    
T  11868 tactactttcctttgct 11884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1668 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold1668
Description:

Target: scaffold1668; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 55 - 200
Target Start/End: Complemental strand, 1502 - 1352
Alignment:
Q  55 aacaatctttgatgtgtttgtttctct-----ctttatcttgtgcttgtggttttgtgcttttcactttgattcctaaattagatctaggtgctgttatt 149  Q
    ||||||||||| |||||||||||||||     ||||||||| ||||||||||||| || |||||||||| ||||||| |||||||||||||||||||||     
T  1502 aacaatctttggtgtgtttgtttctcttctctctttatcttttgcttgtggttttatgtttttcactttaattcctagattagatctaggtgctgttatc 1403  T
Q  150 gttgattattgtttgtgttt-actttgaaagcggttactactttcctttgct 200  Q
    |||| |||||  |||||||| ||||| | |  | ||||||||||||||||||    
T  1402 gttg-ttattacttgtgtttaactttaatattgattactactttcctttgct 1352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2661 - 2598
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatcttt 64  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2661 ttggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatcttt 2598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3783 - 3722
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  3783 ttggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatct 3722  T

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Target: scaffold0219 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 27499 - 27370
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatctttgatgtgtttgt-----ttctctctttatcttgtgct 95  Q
    |||||||||||||||||||| |||||||||||||   |||||||||| | ||| |||| |  ||||||||||| |     ||||||||||| ||| ||||    
T  27499 ttggagagatcaatctctcccccatagtaggtcattgttggaccgaattaggtaaacatttattgatgtgtttatttctcttctctctttaccttttgct 27400  T
Q  96 tgtggttttgtgcttttcactttgattccta 126  Q
    |||||||||||| ||||||| ||||||||||    
T  27399 tgtggttttgtgtttttcac-ttgattccta 27370  T

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Target: scaffold0176 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18061 - 18004
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    ||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||    
T  18061 ttggagagatcaatctctcctccagggtaggtcaagtttggatcgaactgggtgaaca 18004  T

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Target: scaffold0236 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 10604 - 10656
Alignment:
Q  5 agagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||| ||||    
T  10604 agagatcaatctctcctccagagtaggtcaag-ttggaccgaactgggtaaaca 10656  T

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Target: scaffold0137 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6384 - 6445
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    ||||||||  ||| |||||||||| ||||||| |||||||||||||||||||||| ||||||    
T  6384 ttggagagtacaaactctcctccagagtaggttaagtttggaccgaactgggtgaccaatct 6445  T

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Target: scaffold0466 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7438 - 7494
Alignment:
Q  1 ttggagagatcaatctctcctccatagtaggtcaagtttggaccgaactgggtgaaca 58  Q
    ||||| |||||||||||||||| | ||||||| ||| |||||||||||||||||||||    
T  7438 ttggaaagatcaatctctcctctagagtaggttaag-ttggaccgaactgggtgaaca 7494  T

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Target: scaffold1808 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 1 - 37
Alignment:
Q  26 agtaggtcaagtttggaccgaactgggtgaacaatct 62  Q
    |||||||||||||||||||||||||||||| ||||||    
T  1 agtaggtcaagtttggaccgaactgggtgaccaatct 37  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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