View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6232_low_9 (Length: 262)

Name: NF6232_low_9
Description: NF6232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6232_low_9
NF6232_low_9
[»] chr8 (8 HSPs)
chr8 (94-249)||(36402918-36403073)
chr8 (94-213)||(26132062-26132181)
chr8 (98-225)||(10331470-10331596)
chr8 (99-232)||(10333542-10333674)
chr8 (94-144)||(5434032-5434082)
chr8 (92-204)||(44376641-44376752)
chr8 (94-144)||(36402201-36402251)
chr8 (94-143)||(26847097-26847146)
[»] chr1 (6 HSPs)
chr1 (94-249)||(13416228-13416383)
chr1 (92-249)||(5490509-5490665)
chr1 (91-226)||(31109236-31109371)
chr1 (94-145)||(31116681-31116732)
chr1 (97-144)||(5491334-5491381)
chr1 (94-141)||(26240872-26240919)
[»] chr7 (12 HSPs)
chr7 (94-249)||(24874471-24874626)
chr7 (91-233)||(767133-767275)
chr7 (94-233)||(767875-768014)
chr7 (94-144)||(41965775-41965825)
chr7 (94-204)||(24873751-24873861)
chr7 (92-235)||(27918516-27918660)
chr7 (163-233)||(27917764-27917834)
chr7 (96-174)||(21975693-21975771)
chr7 (94-141)||(18569020-18569067)
chr7 (94-141)||(18652891-18652938)
chr7 (94-144)||(41965112-41965162)
chr7 (94-142)||(42817798-42817846)
[»] chr4 (5 HSPs)
chr4 (94-249)||(21281054-21281209)
chr4 (94-244)||(45140454-45140604)
chr4 (94-225)||(45141060-45141191)
chr4 (96-144)||(53778413-53778461)
chr4 (94-138)||(42792775-42792819)
[»] scaffold0006 (2 HSPs)
scaffold0006 (117-249)||(285903-286035)
scaffold0006 (99-144)||(285183-285228)
[»] chr6 (5 HSPs)
chr6 (94-235)||(10965230-10965371)
chr6 (94-221)||(2138477-2138603)
chr6 (94-235)||(709322-709462)
chr6 (94-145)||(10966377-10966428)
chr6 (94-204)||(8113373-8113482)
[»] chr3 (12 HSPs)
chr3 (94-244)||(43453439-43453589)
chr3 (94-233)||(14746811-14746949)
chr3 (93-201)||(43454103-43454210)
chr3 (94-235)||(42020793-42020934)
chr3 (1-45)||(54850568-54850612)
chr3 (94-233)||(14746041-14746180)
chr3 (153-226)||(35982554-35982627)
chr3 (94-142)||(15287567-15287615)
chr3 (94-145)||(16076210-16076261)
chr3 (94-144)||(41419617-41419667)
chr3 (184-244)||(54308966-54309026)
chr3 (156-204)||(41418822-41418869)
[»] chr2 (5 HSPs)
chr2 (94-201)||(7754012-7754119)
chr2 (94-141)||(7754968-7755015)
chr2 (94-136)||(127741-127783)
chr2 (94-144)||(4716871-4716921)
chr2 (94-142)||(44296860-44296908)
[»] chr5 (5 HSPs)
chr5 (94-143)||(23253485-23253534)
chr5 (94-142)||(39466885-39466933)
chr5 (93-141)||(24565572-24565620)
chr5 (93-141)||(24606608-24606656)
chr5 (94-142)||(39937906-39937954)


Alignment Details
Target: chr8 (Bit Score: 111; Significance: 4e-56; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 94 - 249
Target Start/End: Complemental strand, 36403073 - 36402918
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 193  Q
    |||||||||||| |||| ||||||||||||||| ||||||||||||||||||       | |||||||||||||||||||||||||||||||||||||||    
T  36403073 ggtggattctagagtgagggtccaattaggtccctcaccggtggaccacgagaaaaacacagttagataaaatagatggttaagatttattcaaattaaa 36402974  T
Q  194 agtgagaacatatacaattactcacattcaatcctatcctaacattgtttccacct 249  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  36402973 agtgagaacatatacaattactcatattcaatcctatcctaacatggtttccacct 36402918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 94 - 213
Target Start/End: Complemental strand, 26132181 - 26132062
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 193  Q
    |||||||| || ||||| ||||||||||||||| |||| |||||||||||||       |||||||||||||||||||||||||||||||| ||||||||    
T  26132181 ggtggattttaaggtgagggtccaattaggtccctcactggtggaccacgagaaaaacaccgttagataaaatagatggttaagatttattgaaattaaa 26132082  T
Q  194 agtgagaacatatacaatta 213  Q
    ||||||||||||||||||||    
T  26132081 agtgagaacatatacaatta 26132062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 98 - 225
Target Start/End: Original strand, 10331470 - 10331596
Alignment:
Q  98 gattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaaagtg 197  Q
    |||| |||||||| ||||||||||||||  ||| ||||||||||||||       | ||||||| |||||||||||| |||||||||| |||||||| |     
T  10331470 gattatagggtgagggtccaattaggtctctcatcggtggaccacgagaaaaaaactgttagatgaaatagatggttcagatttattc-aattaaaaata 10331568  T
Q  198 agaacatatacaattactcacattcaat 225  Q
    ||||||| |||||||||| |||||||||    
T  10331569 agaacatgtacaattactgacattcaat 10331596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 232
Target Start/End: Complemental strand, 10333674 - 10333542
Alignment:
Q  99 attctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaaagtga 198  Q
    |||||| ||||| ||||||||||||||| ||||| ||||||||||||       | | || ||||||||||||||| ||||||||| ||||||||||||     
T  10333674 attctaaggtgagggtccaattaggtccctcaccagtggaccacgagaaaaca-cagctaaataaaatagatggtttagatttatttaaattaaaagtgg 10333576  T
Q  199 gaacatatacaattactcacattcaatcctatcc 232  Q
    ||| ||||||||  ||| ||||||||| ||||||    
T  10333575 gaatatatacaagcacttacattcaattctatcc 10333542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 5434032 - 5434082
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacga 144  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  5434032 ggtggattctagggtgagggtccaattaagtccttcaccggtggaccacga 5434082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 204
Target Start/End: Original strand, 44376641 - 44376752
Alignment:
Q  92 acggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaatta 191  Q
    |||||||||||||||| || |||||||||| |||| ||| |||||||||||||        ||  || || |||||||||||| ||||||||||||||||    
T  44376641 acggtggattctagggcgagggtccaattacgtccctcatcggtggaccacgaaaaaaataccaataaattaaatagatggttcagatttattcaaatta 44376740  T
Q  192 aaagtgagaacat 204  Q
    |||| ||||||||    
T  44376741 aaag-gagaacat 44376752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 36402201 - 36402251
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacga 144  Q
    |||||||| |||||||| |||||||||||||||  ||||||||||||||||    
T  36402201 ggtggattttagggtgagggtccaattaggtcccacaccggtggaccacga 36402251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 26847097 - 26847146
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacg 143  Q
    ||||||||||||||||| |||||||||| |||| ||||||||| ||||||    
T  26847097 ggtggattctagggtgagggtccaattaagtccctcaccggtgaaccacg 26847146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 4e-56; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 94 - 249
Target Start/End: Complemental strand, 13416383 - 13416228
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 193  Q
    ||||||||||||| ||| ||||||||||||||| || |||||||||||||||       ||||||||||||||||||||||||||| |||||||||||||    
T  13416383 ggtggattctaggatgagggtccaattaggtccctcgccggtggaccacgagaaaaacaccgttagataaaatagatggttaagatatattcaaattaaa 13416284  T
Q  194 agtgagaacatatacaattactcacattcaatcctatcctaacattgtttccacct 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13416283 agtgagaacatatacaattactcacattcaatcctatcctaacatggtttccacct 13416228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 92 - 249
Target Start/End: Original strand, 5490509 - 5490665
Alignment:
Q  92 acggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaatta 191  Q
    ||||||||||||||| ||| ||| ||||||||||  ||| ||||||||||||||       |||||| ||||||||||||||||||||||||||||||||    
T  5490509 acggtggattctagg-tgagggttcaattaggtctctcatcggtggaccacgagaaaaacaccgttaaataaaatagatggttaagatttattcaaatta 5490607  T
Q  192 aaagtgagaacatatacaattactcacattcaatcctatcctaacattgtttccacct 249  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5490608 aaagtaagaacatatacaattactcacattcaatcctatcctaacatggtttccacct 5490665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 226
Target Start/End: Original strand, 31109236 - 31109371
Alignment:
Q  91 tacggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaatt 190  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||| |||||       ||  ||||| ||| |  ||||| ||||||||| |||||    
T  31109236 tacggtggattctagggtgagggtccaattaggtccctcaccggtggactacgagaaaaataccaatagattaaacaagtggttcagatttatttaaatt 31109335  T
Q  191 aaaagtgagaacatatacaattactcacattcaatc 226  Q
    ||||||| |||||| || |  | |||||||||||||    
T  31109336 aaaagtgggaacatgtagagctgctcacattcaatc 31109371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 31116732 - 31116681
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgag 145  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| |||||    
T  31116732 ggtggattctagggtgagggtccaattaggtccctcaccggtggactacgag 31116681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 5491381 - 5491334
Alignment:
Q  97 ggattctagggtgaaggtccaattaggtccttcaccggtggaccacga 144  Q
    |||||||||| ||| ||||||||||||||| |||||||||||||||||    
T  5491381 ggattctaggatgagggtccaattaggtccctcaccggtggaccacga 5491334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 26240919 - 26240872
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggacca 141  Q
    ||||||||||||||||| ||| |||||| |||| ||||||||||||||    
T  26240919 ggtggattctagggtgagggttcaattaagtccctcaccggtggacca 26240872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 2e-51; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 94 - 249
Target Start/End: Complemental strand, 24874626 - 24874471
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 193  Q
    ||||||||||||||||| ||| ||||||||||| ||| ||||||||||||||       |||||||||||||||||||||||||||||||||||||||||    
T  24874626 ggtggattctagggtgagggttcaattaggtccctcatcggtggaccacgagaaaaataccgttagataaaatagatggttaagatttattcaaattaaa 24874527  T
Q  194 agtgagaacatatacaattactcacattcaatcctatcctaacattgtttccacct 249  Q
     ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||    
T  24874526 tgtgagaatatatacaattactcatattcaatcctatcctaacatggtttccacct 24874471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 91 - 233
Target Start/End: Original strand, 767133 - 767275
Alignment:
Q  91 tacggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaatt 190  Q
    |||||||||||||||||||| |||||||||| |||| ||||||||||| || ||        ||||||||| ||||| |||||| |||||||||| ||||    
T  767133 tacggtggattctagggtgagggtccaattaagtccctcaccggtggatcatgaaaaaaacaccgttagattaaatacatggttcagatttattcgaatt 767232  T
Q  191 aaaagtgagaacatatacaattactcacattcaatcctatcct 233  Q
    |||| ||  ||||||||||| ||||||||||||||||||||||    
T  767233 aaaaatggaaacatatacaactactcacattcaatcctatcct 767275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 233
Target Start/End: Complemental strand, 768014 - 767875
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 193  Q
    |||||||| |||||||| |||||||||| |||| |||||||||||||||||        |   |||||||||||||||| | || |||||| ||||||||    
T  768014 ggtggattttagggtgagggtccaattaagtccctcaccggtggaccacgaaaaaaatacaagtagataaaatagatggatcaggtttatttaaattaaa 767915  T
Q  194 agtgagaacatatacaattactcacattcaatcctatcct 233  Q
    | ||| ||||||||||| |||| ||||| |||| ||||||    
T  767914 aatgaaaacatatacaactacttacatttaatcttatcct 767875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 41965825 - 41965775
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacga 144  Q
    ||||||||||||||||| |||||||||| |||| |||||||||||||||||    
T  41965825 ggtggattctagggtgagggtccaattaagtccctcaccggtggaccacga 41965775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 204
Target Start/End: Original strand, 24873751 - 24873861
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 193  Q
    ||||||||||||||||| ||||||||||||||| ||| | |||||||| ||        ||  ||||| |||||  ||||| ||||||||||||||||||    
T  24873751 ggtggattctagggtgagggtccaattaggtccctcatcagtggaccatgaaaaaaacaccaatagattaaataagtggtttagatttattcaaattaaa 24873850  T
Q  194 agtgagaacat 204  Q
    || ||||||||    
T  24873851 agggagaacat 24873861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 235
Target Start/End: Complemental strand, 27918660 - 27918516
Alignment:
Q  92 acggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnn-ccgttagataaaatagatggttaagatttattcaaatt 190  Q
    |||||| ||| |||| ||| ||||||||||||||| ||||||||||| |||||         ||  ||||| |||||||||||| | ||||||| |||      
T  27918660 acggtgaattttaggatgagggtccaattaggtccctcaccggtggatcacgaaaaaaaataccaatagattaaatagatggttcatatttattaaaagc 27918561  T
Q  191 aaaagtgagaacatatacaattactcacattcaatcctatcctaa 235  Q
    || ||||| || || ||||| ||||||||||||||||||||||||    
T  27918560 aatagtgaaaatatgtacaactactcacattcaatcctatcctaa 27918516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 27917764 - 27917834
Alignment:
Q  163 aaatagatggttaagatttattcaaattaaaagtgagaacatatacaattactcacattcaatcctatcct 233  Q
    ||||| ||| || ||||||||||||||||||| |  |||||||||||| || |||||||||||| ||||||    
T  27917764 aaatacatgcttcagatttattcaaattaaaaataggaacatatacaactattcacattcaatcttatcct 27917834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 174
Target Start/End: Original strand, 21975693 - 21975771
Alignment:
Q  96 tggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggtt 174  Q
    ||||||||| || || |||| |||||||||| ||||||||||||||| ||       ||||||||||||||||||||||    
T  21975693 tggattctatggcgagggtctaattaggtccctcaccggtggaccacaagaaaaacaccgttagataaaatagatggtt 21975771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 18569067 - 18569020
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggacca 141  Q
    ||||||||||||||||||||||| ||||  ||| ||||||||||||||    
T  18569067 ggtggattctagggtgaaggtcctattaaatccctcaccggtggacca 18569020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 18652891 - 18652938
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggacca 141  Q
    ||||||||||||||||||||||| ||||  ||| ||||||||||||||    
T  18652891 ggtggattctagggtgaaggtcctattaaatccctcaccggtggacca 18652938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 41965112 - 41965162
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacga 144  Q
    ||||||||||||||||| |||||||||| |||| |||  ||||||||||||    
T  41965112 ggtggattctagggtgagggtccaattaagtccctcattggtggaccacga 41965162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 42817798 - 42817846
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccac 142  Q
    |||| |||||||||||| |||||||||| |||| ||| |||||||||||    
T  42817798 ggtgaattctagggtgatggtccaattaagtccctcatcggtggaccac 42817846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 2e-51; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 94 - 249
Target Start/End: Complemental strand, 21281209 - 21281054
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 193  Q
    ||||||||||||||||| ||||||||||| ||| ||| ||||||||||||||       |||||||||||||||||||||||| ||||||||||||||||    
T  21281209 ggtggattctagggtgagggtccaattagatccctcatcggtggaccacgagaaaaacaccgttagataaaatagatggttaaaatttattcaaattaaa 21281110  T
Q  194 agtgagaacatatacaattactcacattcaatcctatcctaacattgtttccacct 249  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||    
T  21281109 agtgagaacatatacaattacacacattcaatcttatcctaacatggtttccacct 21281054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 94 - 244
Target Start/End: Original strand, 45140454 - 45140604
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 193  Q
    |||||||||||||||||||||||||| | |||||||| ||| |||| |||||       |   || || |||||||||||| ||||||||||||||||||    
T  45140454 ggtggattctagggtgaaggtccaatcaagtccttcatcggcggacaacgagaaaaacacttatatatgaaatagatggttcagatttattcaaattaaa 45140553  T
Q  194 agtgagaacatatacaattactcacattcaatcctatcctaacattgtttc 244  Q
    |||| |||||| ||||| |||||||||| ||||||||||||| || |||||    
T  45140554 agtgggaacatgtacaactactcacatttaatcctatcctaaaatggtttc 45140604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 225
Target Start/End: Complemental strand, 45141191 - 45141060
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 193  Q
    ||||||||||||||||| ||||||||||| ||| ||| || ||||||| |||        || ||||| |||||||||||| ||||||||||| ||||||    
T  45141191 ggtggattctagggtgagggtccaattagatccctcatcgatggaccatgagaaaaacaacgatagatgaaatagatggttcagatttattcagattaaa 45141092  T
Q  194 agtgagaacatatacaattactcacattcaat 225  Q
    || || ||||| | ||| |  |||||||||||    
T  45141091 agagataacatgtgcaacttttcacattcaat 45141060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 53778461 - 53778413
Alignment:
Q  96 tggattctagggtgaaggtccaattaggtccttcaccggtggaccacga 144  Q
    ||||||||||||||| |||||| ||| |||| |||||||||||||||||    
T  53778461 tggattctagggtgagggtccatttaagtccctcaccggtggaccacga 53778413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 42792775 - 42792819
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtgga 138  Q
    ||||||||||||||||| |||||||||| |||| |||||| ||||    
T  42792775 ggtggattctagggtgagggtccaattaagtccctcaccgatgga 42792819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 117 - 249
Target Start/End: Complemental strand, 286035 - 285903
Alignment:
Q  117 aattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaaagtgagaacatatacaattactc 216  Q
    |||||||||| | ||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  286035 aattaggtcccttaccggtggaccacgagaaaaacaccgttagataaaatagatggttaagatttattcaaattaaaagtgagaacatatacaattactc 285936  T
Q  217 acattcaatcctatcctaacattgtttccacct 249  Q
    |||||||||||||||||||||| ||||||||||    
T  285935 acattcaatcctatcctaacatggtttccacct 285903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 285183 - 285228
Alignment:
Q  99 attctagggtgaaggtccaattaggtccttcaccggtggaccacga 144  Q
    |||||||||||| ||||||||||||||| | |||||||||||||||    
T  285183 attctagggtgagggtccaattaggtcccttaccggtggaccacga 285228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 235
Target Start/End: Original strand, 10965230 - 10965371
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 193  Q
    |||||||| ||||||||||||||||||| |||  ||| |||||||||| |||       || |||||| |||||||||||| | ||||||| ||||||||    
T  10965230 ggtggattttagggtgaaggtccaattaagtctctcatcggtggaccatgagaaaaataccattagattaaatagatggttcaaatttatttaaattaaa 10965329  T
Q  194 agtgagaacatatacaattactcacattcaatcctatcctaa 235  Q
    ||||  ||||| ||||| ||||||||||||||||||||||||    
T  10965330 agtggaaacatgtacaactactcacattcaatcctatcctaa 10965371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 94 - 221
Target Start/End: Original strand, 2138477 - 2138603
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 193  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||||||||||       ||  || || |||||||||||| ||||||||||||||||||    
T  2138477 ggtgaattctagggtgagggtccaattaggtccctcaccggtggaccacgagaaaaataccaataaattaaatagatggttgagatttattcaaattaaa 2138576  T
Q  194 agtgagaacatatacaattactcacatt 221  Q
    ||||| ||||| ||||| ||||||||||    
T  2138577 agtga-aacatgtacaactactcacatt 2138603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 235
Target Start/End: Original strand, 709322 - 709462
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 193  Q
    |||| |||||||| ||| ||||||||||| ||| |||||| |||| ||||||       ||  ||||| |||||||||||| ||||||||||||||||||    
T  709322 ggtgaattctaggatgagggtccaattagatccctcaccgatggatcacgagaaaaataccaatagattaaatagatggttcagatttattcaaattaaa 709421  T
Q  194 agtgagaacatatacaattactcacattcaatcctatcctaa 235  Q
    | ||| || || ||||| ||||||||||||||||||||||||    
T  709422 aatga-aatatgtacaactactcacattcaatcctatcctaa 709462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 10966428 - 10966377
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgag 145  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10966428 ggtggattctagggtgaaggtccaattaggtccctcaccggtggaccacgag 10966377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 204
Target Start/End: Original strand, 8113373 - 8113482
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 193  Q
    |||||||||||||| || ||||||||||||||||||| | |||||||||||        ||  || || |||||||||||| | ||||||||||||||||    
T  8113373 ggtggattctagggcgagggtccaattaggtccttcatctgtggaccacgaaaataataccaataaattaaatagatggttcaaatttattcaaattaaa 8113472  T
Q  194 agtgagaacat 204  Q
    || ||||||||    
T  8113473 ag-gagaacat 8113482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 244
Target Start/End: Original strand, 43453439 - 43453589
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 193  Q
    ||||||||||||||||| ||||||||||  ||| |||||| |||||||||||       ||  ||||| |||||||||||| | ||||||| ||||||||    
T  43453439 ggtggattctagggtgagggtccaattaaatccctcaccgctggaccacgagaaaaataccaatagattaaatagatggttcaaatttatttaaattaaa 43453538  T
Q  194 agtgagaacatatacaattactcacattcaatcctatcctaacattgtttc 244  Q
    | || |||||| ||||| |||||||||||||| ||||||||| || |||||    
T  43453539 attgggaacatgtacaactactcacattcaattctatcctaaaatggtttc 43453589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 233
Target Start/End: Complemental strand, 14746949 - 14746811
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 193  Q
    ||||||||||||| ||| |||||||||| |||| ||| |||||||||||||        ||||||||| ||||| |||||| | |||||||| |||||||    
T  14746949 ggtggattctagg-tgagggtccaattaagtccctcatcggtggaccacgaaaaaaacaccgttagattaaatacatggttcaaatttattcgaattaaa 14746851  T
Q  194 agtgagaacatatacaattactcacattcaatcctatcct 233  Q
    | ||  ||||||||||| ||||||||||||||||||||||    
T  14746850 aatggaaacatatacaactactcacattcaatcctatcct 14746811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 93 - 201
Target Start/End: Complemental strand, 43454210 - 43454103
Alignment:
Q  93 cggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaa 192  Q
    |||||||||||||||||| ||||||||||||||| ||||| ||||||||||||       ||| | |||||||||||||||| ||||||||||||||| |    
T  43454210 cggtggattctagggtgagggtccaattaggtccctcacctgtggaccacgag-aaaacaccgatggataaaatagatggttcagatttattcaaattca 43454112  T
Q  193 aagtgagaa 201  Q
    ||| |||||    
T  43454111 aagagagaa 43454103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 235
Target Start/End: Complemental strand, 42020934 - 42020793
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 193  Q
    |||| |||||||||||| ||||||||||||||  || |||||||| |||||        ||  ||||| |||||||||||| ||||||||| |||  ||     
T  42020934 ggtgaattctagggtgagggtccaattaggtctctcgccggtggatcacgaaaaaaataccaatagattaaatagatggttcagatttattaaaagcaat 42020835  T
Q  194 agtgagaacatatacaattactcacattcaatcctatcctaa 235  Q
    ||||  ||||| ||||| ||||||||||||||||||||||||    
T  42020834 agtgtaaacatgtacaactactcacattcaatcctatcctaa 42020793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 54850568 - 54850612
Alignment:
Q  1 taatttgcgttccactatcaacaatctcaagcaagtttcacgttc 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  54850568 taatttgcgttccactatcaacaatctcaagcaagtttcacgttc 54850612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 233
Target Start/End: Original strand, 14746041 - 14746180
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 193  Q
    ||||||||||||||||| ||||||||||  ||| || ||||||||||||||        ||  ||||| |||||||||| | ||||||||| ||||||||    
T  14746041 ggtggattctagggtgagggtccaattaaatccctccccggtggaccacgaaaaaaacgccactagatgaaatagatggatcagatttatttaaattaaa 14746140  T
Q  194 agtgagaacatatacaattactcacattcaatcctatcct 233  Q
    | ||  |||||||||   |||||||||| |||| ||||||    
T  14746141 aatggaaacatatacggctactcacatttaatcttatcct 14746180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 35982554 - 35982627
Alignment:
Q  153 ccgttagataaaatagatggttaagatttattcaaattaaaagtgagaacatatacaattactcacattcaatc 226  Q
    ||||||||| ||||| |||||| |||||||||| |||||||| |   ||||||||||| |||||||||||||||    
T  35982554 ccgttagattaaatacatggttcagatttattcgaattaaaaatagaaacatatacaactactcacattcaatc 35982627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 15287567 - 15287615
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccac 142  Q
    ||||||||||||||||| |||||||||| |||| |||||||||||||||    
T  15287567 ggtggattctagggtgagggtccaattaagtccctcaccggtggaccac 15287615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 16076210 - 16076261
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgag 145  Q
    ||||||||||||||||| ||||||||||||||| |||||  |||||||||||    
T  16076210 ggtggattctagggtgagggtccaattaggtccctcaccaatggaccacgag 16076261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 41419667 - 41419617
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacga 144  Q
    |||||||||||| |||| || |||||||||||| |||||||||||||||||    
T  41419667 ggtggattctagtgtgaggggccaattaggtccctcaccggtggaccacga 41419617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 54308966 - 54309026
Alignment:
Q  184 tcaaattaaaagtgagaacatatacaattactcacattcaatcctatcctaacattgtttc 244  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||| |||| ||| || |||||    
T  54308966 tcaaattaaaattgagaacatgtacaactactcacattcaatcatatcttaaaatggtttc 54309026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 41418822 - 41418869
Alignment:
Q  156 ttagataaaatagatggttaagatttattcaaattaaaagtgagaacat 204  Q
    |||||| ||||| |||||| |||||||||||||||||||| ||||||||    
T  41418822 ttagattaaataaatggttcagatttattcaaattaaaag-gagaacat 41418869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 201
Target Start/End: Original strand, 7754012 - 7754119
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacgagnnnnnnnccgttagataaaatagatggttaagatttattcaaattaaa 193  Q
    ||||||||||||||||| ||||||||||||||| || |||||||| |||||        ||  || ||||||||||| ||| ||||||||||||||||||    
T  7754012 ggtggattctagggtgagggtccaattaggtccctccccggtggatcacgaaaaaaataccaataaataaaatagatagttcagatttattcaaattaaa 7754111  T
Q  194 agtgagaa 201  Q
    || |||||    
T  7754112 agggagaa 7754119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 7755015 - 7754968
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggacca 141  Q
    ||||||||||||||||| ||  |||||| |||||||||||||||||||    
T  7755015 ggtggattctagggtgagggatcaattaagtccttcaccggtggacca 7754968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 127783 - 127741
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtg 136  Q
    ||||||||||||||||| ||| |||||| ||||||||||||||    
T  127783 ggtggattctagggtgagggttcaattaagtccttcaccggtg 127741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 4716921 - 4716871
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacga 144  Q
    ||||||||||||||||| ||||||||||  | |||||| ||||||||||||    
T  4716921 ggtggattctagggtgagggtccaattaaattcttcactggtggaccacga 4716871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 44296860 - 44296908
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccac 142  Q
    |||| |||||||||||| |||||||||| |||| |||| ||||||||||    
T  44296860 ggtgaattctagggtgagggtccaattaagtccctcactggtggaccac 44296908  T

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Target: chr5 (Bit Score: 34; Significance: 0.0000000004; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 23253534 - 23253485
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccacg 143  Q
    ||||||||||||||||| |||||||||| |||| ||||||||| ||||||    
T  23253534 ggtggattctagggtgagggtccaattaagtccctcaccggtgaaccacg 23253485  T

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Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 39466885 - 39466933
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccac 142  Q
    |||| |||||||||||| |||||||||| |||| |||||||||||||||    
T  39466885 ggtgaattctagggtgagggtccaattaagtccctcaccggtggaccac 39466933  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 24565572 - 24565620
Alignment:
Q  93 cggtggattctagggtgaaggtccaattaggtccttcaccggtggacca 141  Q
    |||||||||||||||||| ||| ||||||  ||| ||||||||||||||    
T  24565572 cggtggattctagggtgagggttcaattaaatccctcaccggtggacca 24565620  T

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Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 24606608 - 24606656
Alignment:
Q  93 cggtggattctagggtgaaggtccaattaggtccttcaccggtggacca 141  Q
    |||||||||||||||||| ||| ||||||  ||| ||||||||||||||    
T  24606608 cggtggattctagggtgagggttcaattaaatccctcaccggtggacca 24606656  T

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Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 39937954 - 39937906
Alignment:
Q  94 ggtggattctagggtgaaggtccaattaggtccttcaccggtggaccac 142  Q
    ||||||||||||||||| ||| || ||| |||| |||||||||||||||    
T  39937954 ggtggattctagggtgagggttcagttaagtccctcaccggtggaccac 39937906  T

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