View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6233_high_8 (Length: 277)
Name: NF6233_high_8
Description: NF6233
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6233_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 11618975 - 11619246
Alignment:
| Q |
1 |
tagaggttgtactcatatttttgtagatgtgaggaattttaattttaagattttgccttttgtggttcaagggtatgttgcgactcgtggtaaaatgtcg |
100 |
Q |
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| T |
11618975 |
tagaggttgtactcatatttttgtagatgtgaggaattttaattttaagattttgccttttgtggttcaagggtatgttgcgactcgtggtaaaatgtcg |
11619074 |
T |
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| Q |
101 |
tagttttaatcaatgagattagcagaaggggccgatcttctacaatatggtgactcagggcttgaagttctgggagaggttccctctaacaagattattt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11619075 |
tagttttaatcaatgagattagcagaaggggccgatcttctacaatacggtgactcagggcttgaagttctgggagaggttccctctaacaagattattt |
11619174 |
T |
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| Q |
201 |
ccattaggagatcttgcgattttcgtcattagattgttccatggaatgcaatgatatgatgcaaatgatgat |
272 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
11619175 |
ccattaggagatcttgcgattttcgtcattagattgtttcatggaatgcaatgatatgatgcaaatgatgat |
11619246 |
T |
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