View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6235_high_2 (Length: 239)
Name: NF6235_high_2
Description: NF6235
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6235_high_2 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 101 - 239
Target Start/End: Original strand, 28596682 - 28596820
Alignment:
| Q |
101 |
ggagaaaatatcaccttaaagtcccttccttttctttctctcaaacgctttaaattcatttccatcagttacattttcttttcaaaaccctttgacacac |
200 |
Q |
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| T |
28596682 |
ggagaaaatatcaccttaaagtcccttccttttctttctctcaaacgctttaaattcatttccatcagttacattttcttttcaaaaccctttgacacac |
28596781 |
T |
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| Q |
201 |
tcactcactcatcattcatcatatatataaatttatacc |
239 |
Q |
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| T |
28596782 |
tcactcactcatcattcatcatatatataaatttatacc |
28596820 |
T |
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