View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6236_high_16 (Length: 250)

Name: NF6236_high_16
Description: NF6236
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6236_high_16
NF6236_high_16
[»] chr3 (42 HSPs)
chr3 (72-250)||(26849319-26849493)
chr3 (78-247)||(43132333-43132498)
chr3 (68-250)||(8476481-8476660)
chr3 (68-250)||(53165898-53166076)
chr3 (172-250)||(19532964-19533042)
chr3 (68-250)||(26848741-26848920)
chr3 (73-250)||(33218086-33218260)
chr3 (73-250)||(1098923-1099096)
chr3 (73-250)||(10822891-10823064)
chr3 (78-250)||(31611158-31611327)
chr3 (67-250)||(44952026-44952206)
chr3 (78-250)||(47115030-47115199)
chr3 (73-250)||(24574291-24574465)
chr3 (73-250)||(6231674-6231848)
chr3 (73-250)||(11239293-11239467)
chr3 (73-250)||(20297517-20297691)
chr3 (68-250)||(20414638-20414817)
chr3 (73-153)||(40907990-40908070)
chr3 (73-153)||(46359676-46359756)
chr3 (69-250)||(29512320-29512498)
chr3 (73-250)||(48339930-48340104)
chr3 (73-137)||(31267630-31267694)
chr3 (73-153)||(32070994-32071074)
chr3 (78-149)||(6927820-6927891)
chr3 (78-153)||(49216029-49216104)
chr3 (78-250)||(28124609-28124778)
chr3 (76-160)||(38140628-38140712)
chr3 (78-153)||(43719192-43719267)
chr3 (73-150)||(9320719-9320796)
chr3 (72-149)||(12228525-12228602)
chr3 (78-137)||(18460582-18460641)
chr3 (172-231)||(32071266-32071325)
chr3 (78-149)||(33650285-33650356)
chr3 (64-153)||(6832189-6832278)
chr3 (78-111)||(13642828-13642861)
chr3 (78-149)||(24783938-24784009)
chr3 (73-160)||(28770469-28770556)
chr3 (172-249)||(9320622-9320700)
chr3 (73-115)||(27822995-27823037)
chr3 (71-160)||(31436182-31436271)
chr3 (89-153)||(27093769-27093833)
chr3 (172-208)||(43719141-43719177)
[»] chr8 (38 HSPs)
chr8 (100-250)||(6805796-6805946)
chr8 (78-153)||(41432468-41432543)
chr8 (72-250)||(18297835-18298010)
chr8 (73-250)||(25837635-25837809)
chr8 (73-250)||(38363805-38363979)
chr8 (73-250)||(3049733-3049907)
chr8 (73-250)||(26061868-26062042)
chr8 (73-250)||(37392719-37392893)
chr8 (73-250)||(38132911-38133085)
chr8 (78-250)||(10896389-10896558)
chr8 (73-153)||(16313774-16313854)
chr8 (73-249)||(18726794-18726967)
chr8 (73-248)||(31117699-31117873)
chr8 (68-250)||(7930958-7931137)
chr8 (73-250)||(35818597-35818771)
chr8 (73-250)||(12710369-12710543)
chr8 (68-250)||(32661107-32661286)
chr8 (78-250)||(40197226-40197395)
chr8 (78-250)||(42755596-42755765)
chr8 (78-250)||(5020666-5020833)
chr8 (172-250)||(7317196-7317273)
chr8 (65-250)||(26602110-26602292)
chr8 (73-147)||(34672085-34672161)
chr8 (73-153)||(43872232-43872312)
chr8 (172-250)||(41228886-41228965)
chr8 (69-153)||(37982054-37982138)
chr8 (73-149)||(25899383-25899459)
chr8 (78-250)||(21137305-21137472)
chr8 (73-153)||(15226690-15226770)
chr8 (87-153)||(1554621-1554688)
chr8 (73-152)||(33533660-33533739)
chr8 (68-231)||(16219134-16219293)
chr8 (172-231)||(19160933-19160992)
chr8 (70-149)||(37124070-37124149)
chr8 (176-250)||(29421662-29421736)
chr8 (73-248)||(33444798-33444969)
chr8 (172-242)||(35394210-35394280)
chr8 (73-137)||(19161024-19161088)
[»] chr5 (28 HSPs)
chr5 (69-250)||(27480731-27480908)
chr5 (73-250)||(12970703-12970877)
chr5 (72-250)||(555879-556054)
chr5 (68-153)||(8406613-8406698)
chr5 (73-250)||(22936085-22936259)
chr5 (73-250)||(28602280-28602454)
chr5 (73-250)||(29543188-29543362)
chr5 (78-250)||(11855828-11855997)
chr5 (66-250)||(18411926-18412107)
chr5 (73-153)||(26637288-26637368)
chr5 (78-250)||(1664460-1664628)
chr5 (73-250)||(32535661-32535835)
chr5 (78-250)||(19065678-19065847)
chr5 (78-250)||(27481086-27481255)
chr5 (68-250)||(4765733-4765912)
chr5 (172-250)||(14206994-14207073)
chr5 (78-145)||(20962289-20962356)
chr5 (73-152)||(28429452-28429531)
chr5 (73-250)||(6091439-6091613)
chr5 (73-206)||(6930366-6930495)
chr5 (78-157)||(31583322-31583401)
chr5 (172-250)||(36703693-36703772)
chr5 (78-153)||(8646657-8646732)
chr5 (78-145)||(42012459-42012526)
chr5 (100-149)||(35603045-35603094)
chr5 (83-148)||(35348797-35348862)
chr5 (73-153)||(14207088-14207168)
chr5 (73-137)||(43347177-43347241)
[»] chr7 (45 HSPs)
chr7 (78-250)||(30686165-30686333)
chr7 (72-250)||(27419397-27419572)
chr7 (78-250)||(45045355-45045524)
chr7 (68-250)||(44565764-44565943)
chr7 (73-250)||(45265221-45265395)
chr7 (73-250)||(33378558-33378732)
chr7 (78-250)||(37534276-37534444)
chr7 (70-250)||(34930640-34930817)
chr7 (73-247)||(9947166-9947338)
chr7 (73-250)||(35488362-35488536)
chr7 (87-151)||(45722897-45722961)
chr7 (73-250)||(27214028-27214202)
chr7 (78-250)||(39553911-39554081)
chr7 (79-250)||(43948975-43949143)
chr7 (73-250)||(48341088-48341261)
chr7 (73-250)||(11329717-11329891)
chr7 (78-250)||(44819983-44820152)
chr7 (73-149)||(48313846-48313922)
chr7 (78-153)||(31598452-31598527)
chr7 (87-250)||(38543932-38544092)
chr7 (73-250)||(48160746-48160920)
chr7 (78-250)||(25097797-25097967)
chr7 (73-250)||(28904359-28904533)
chr7 (78-160)||(22156438-22156520)
chr7 (78-160)||(22212353-22212435)
chr7 (109-250)||(8419762-8419900)
chr7 (73-157)||(17276422-17276506)
chr7 (78-250)||(27248022-27248191)
chr7 (73-250)||(25924810-25924984)
chr7 (172-249)||(43569859-43569936)
chr7 (73-250)||(45448666-45448840)
chr7 (181-249)||(45722978-45723046)
chr7 (172-250)||(9814387-9814466)
chr7 (78-133)||(24769243-24769298)
chr7 (172-250)||(40212708-40212787)
chr7 (172-249)||(41684196-41684273)
chr7 (73-149)||(5543401-5543477)
chr7 (78-149)||(18823891-18823962)
chr7 (172-250)||(38396539-38396618)
chr7 (172-250)||(41632537-41632616)
chr7 (172-250)||(6656644-6656722)
chr7 (185-250)||(16825527-16825593)
chr7 (189-250)||(6656396-6656457)
chr7 (87-148)||(40385899-40385960)
chr7 (73-153)||(38396633-38396712)
[»] chr2 (50 HSPs)
chr2 (78-250)||(3902186-3902354)
chr2 (78-250)||(28311870-28312038)
chr2 (78-250)||(37233159-37233327)
chr2 (73-250)||(20426656-20426829)
chr2 (68-250)||(11071324-11071503)
chr2 (73-250)||(17965707-17965881)
chr2 (73-250)||(41729303-41729477)
chr2 (73-153)||(2050590-2050670)
chr2 (73-250)||(7007309-7007482)
chr2 (78-250)||(9734019-9734188)
chr2 (67-250)||(346518-346698)
chr2 (68-250)||(6171510-6171689)
chr2 (78-250)||(21737581-21737750)
chr2 (73-250)||(638318-638492)
chr2 (73-250)||(4559283-4559457)
chr2 (73-250)||(14777671-14777845)
chr2 (73-250)||(37192246-37192420)
chr2 (73-250)||(42674834-42675008)
chr2 (78-250)||(13760696-13760865)
chr2 (79-250)||(27358136-27358303)
chr2 (73-250)||(5770283-5770457)
chr2 (73-147)||(14403477-14403553)
chr2 (79-249)||(45408981-45409147)
chr2 (78-250)||(26309996-26310165)
chr2 (78-149)||(13790019-13790090)
chr2 (66-153)||(5003102-5003189)
chr2 (172-250)||(39995312-39995391)
chr2 (66-153)||(40569735-40569822)
chr2 (78-250)||(40951032-40951201)
chr2 (108-250)||(2521434-2521573)
chr2 (74-152)||(4875501-4875579)
chr2 (96-250)||(41750276-41750427)
chr2 (78-208)||(3254308-3254434)
chr2 (68-153)||(37533672-37533757)
chr2 (79-148)||(41298186-41298255)
chr2 (79-152)||(45212662-45212735)
chr2 (73-250)||(23943887-23944061)
chr2 (81-148)||(25444932-25444999)
chr2 (78-133)||(25625054-25625109)
chr2 (78-153)||(45693918-45693993)
chr2 (87-153)||(11763667-11763733)
chr2 (72-150)||(39819413-39819491)
chr2 (73-157)||(18713919-18714003)
chr2 (78-157)||(14832540-14832619)
chr2 (172-250)||(34356872-34356951)
chr2 (172-250)||(1988131-1988209)
chr2 (78-148)||(14253255-14253325)
chr2 (175-250)||(1623206-1623281)
chr2 (79-149)||(13539399-13539469)
chr2 (78-115)||(36590878-36590915)
[»] chr1 (59 HSPs)
chr1 (71-250)||(1597515-1597691)
chr1 (72-250)||(32202486-32202661)
chr1 (80-250)||(4683546-4683713)
chr1 (87-250)||(35187195-35187355)
chr1 (78-250)||(48916195-48916364)
chr1 (73-250)||(14788448-14788622)
chr1 (73-250)||(25789488-25789662)
chr1 (73-250)||(8331739-8331913)
chr1 (73-250)||(37436793-37436966)
chr1 (79-250)||(48462263-48462429)
chr1 (73-250)||(29091397-29091570)
chr1 (73-250)||(20260259-20260433)
chr1 (73-249)||(5806450-5806623)
chr1 (78-250)||(9832043-9832212)
chr1 (73-250)||(6911210-6911384)
chr1 (67-250)||(47031578-47031758)
chr1 (76-250)||(13653579-13653750)
chr1 (73-250)||(9115562-9115736)
chr1 (73-250)||(39930182-39930356)
chr1 (73-250)||(52630498-52630672)
chr1 (65-250)||(5518677-5518858)
chr1 (73-145)||(9011437-9011509)
chr1 (73-153)||(38964946-38965026)
chr1 (73-157)||(47677369-47677453)
chr1 (172-250)||(1007591-1007669)
chr1 (68-250)||(46666428-46666607)
chr1 (73-250)||(12190350-12190524)
chr1 (73-250)||(32824646-32824820)
chr1 (79-152)||(52186265-52186338)
chr1 (73-157)||(19923726-19923810)
chr1 (67-247)||(36361502-36361679)
chr1 (78-250)||(51445252-51445421)
chr1 (78-153)||(13932139-13932214)
chr1 (73-152)||(25473980-25474059)
chr1 (78-148)||(49627304-49627374)
chr1 (172-250)||(2632673-2632752)
chr1 (172-250)||(3572738-3572817)
chr1 (172-250)||(6978590-6978669)
chr1 (73-160)||(24116594-24116681)
chr1 (78-149)||(31807018-31807089)
chr1 (172-250)||(39329428-39329507)
chr1 (78-152)||(1228147-1228221)
chr1 (87-148)||(45813666-45813727)
chr1 (73-133)||(3939226-3939286)
chr1 (73-157)||(46960353-46960437)
chr1 (78-153)||(2430227-2430302)
chr1 (172-231)||(30240831-30240890)
chr1 (78-129)||(47845422-47845473)
chr1 (87-153)||(52699732-52699798)
chr1 (78-115)||(11014842-11014879)
chr1 (173-250)||(37336617-37336694)
chr1 (79-151)||(2632584-2632656)
chr1 (78-231)||(38519253-38519402)
chr1 (78-149)||(37261549-37261620)
chr1 (172-250)||(50190937-50191016)
chr1 (73-148)||(50191036-50191111)
chr1 (172-249)||(49823070-49823148)
chr1 (73-153)||(17475576-17475656)
chr1 (190-250)||(52186202-52186262)
[»] chr4 (50 HSPs)
chr4 (72-250)||(40435627-40435802)
chr4 (73-250)||(39730466-39730640)
chr4 (73-250)||(31938043-31938216)
chr4 (73-250)||(25932169-25932343)
chr4 (73-250)||(45595996-45596170)
chr4 (73-250)||(55968173-55968347)
chr4 (73-250)||(43722992-43723166)
chr4 (73-250)||(18405406-18405580)
chr4 (78-153)||(18931486-18931561)
chr4 (66-153)||(23686508-23686595)
chr4 (73-250)||(13230162-13230336)
chr4 (73-250)||(27763072-27763246)
chr4 (73-250)||(39835480-39835654)
chr4 (78-250)||(35999419-35999588)
chr4 (73-250)||(45747969-45748142)
chr4 (79-250)||(50673078-50673245)
chr4 (67-250)||(48873743-48873923)
chr4 (67-250)||(48879047-48879227)
chr4 (73-250)||(47670090-47670264)
chr4 (73-250)||(935854-936028)
chr4 (70-250)||(41744394-41744571)
chr4 (73-250)||(6280094-6280268)
chr4 (68-250)||(8321968-8322147)
chr4 (73-250)||(41859219-41859393)
chr4 (73-153)||(7258692-7258772)
chr4 (78-250)||(42773681-42773850)
chr4 (78-250)||(48519064-48519233)
chr4 (78-153)||(32953256-32953331)
chr4 (79-250)||(34238127-34238295)
chr4 (78-148)||(14796296-14796366)
chr4 (73-138)||(18405131-18405196)
chr4 (73-153)||(27555155-27555235)
chr4 (173-249)||(38414032-38414108)
chr4 (78-157)||(52469430-52469510)
chr4 (78-160)||(10401040-10401122)
chr4 (73-149)||(36860027-36860103)
chr4 (172-250)||(25916206-25916285)
chr4 (78-153)||(38413909-38413984)
chr4 (176-250)||(39498652-39498727)
chr4 (176-250)||(39501991-39502066)
chr4 (79-157)||(37014646-37014724)
chr4 (172-250)||(27942560-27942639)
chr4 (73-152)||(30790276-30790354)
chr4 (172-250)||(34049770-34049849)
chr4 (79-157)||(12276173-12276250)
chr4 (172-250)||(36858230-36858308)
chr4 (189-249)||(30415743-30415803)
chr4 (73-153)||(38394635-38394715)
chr4 (81-137)||(44309497-44309553)
chr4 (173-249)||(52469523-52469599)
[»] chr6 (13 HSPs)
chr6 (68-250)||(16968644-16968823)
chr6 (73-250)||(8029027-8029201)
chr6 (68-250)||(7053751-7053930)
chr6 (78-250)||(14170744-14170913)
chr6 (68-250)||(10246289-10246468)
chr6 (73-250)||(18897645-18897819)
chr6 (73-153)||(2657424-2657504)
chr6 (78-153)||(21008246-21008321)
chr6 (73-250)||(1316743-1316917)
chr6 (78-149)||(6706023-6706094)
chr6 (77-157)||(8314622-8314702)
chr6 (83-149)||(7344765-7344831)
chr6 (187-250)||(7344256-7344320)
[»] scaffold0006 (2 HSPs)
scaffold0006 (76-250)||(143340-143511)
scaffold0006 (73-149)||(201650-201726)
[»] scaffold0238 (1 HSPs)
scaffold0238 (69-149)||(23604-23683)
[»] scaffold0005 (1 HSPs)
scaffold0005 (78-148)||(43365-43435)
[»] scaffold0189 (1 HSPs)
scaffold0189 (78-153)||(29219-29294)
[»] scaffold0702 (1 HSPs)
scaffold0702 (73-153)||(3832-3912)
[»] scaffold0662 (1 HSPs)
scaffold0662 (73-153)||(4190-4270)


Alignment Details
Target: chr3 (Bit Score: 94; Significance: 5e-46; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 72 - 250
Target Start/End: Complemental strand, 26849493 - 26849319
Alignment:
Q  72 aggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnn 171  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||     |||||            
T  26849493 aggtgtgtttgttttaagtttaccaaatttatttttaggaataatatttcttggaatataaagatggaaattttatttcaag----gtatttagaaaaaa 26849398  T
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    |||||||||||||||||||||||||| ||| |||||| ||| |||||||| ||||||||| ||||||||||||||||||    
T  26849397 tatgtttggttaactttataatattcataggaaccataaaaatagagattataataggtaactatttatgaatttattc 26849319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 78 - 247
Target Start/End: Complemental strand, 43132498 - 43132333
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| |||||||  ||||||||| |||||||||| ||| |||| ||||||||||||  |||||||||||||| |||    ||        ||||||    
T  43132498 gtttgtttcaagtttactaaatttattcttaggaataacattccttggaatataaagatgagaattttattccaaggtat----ttaggaaaaatatgtt 43132403  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaattta 247  Q
    |||||||||||||||||||| ||| |||||||||| ||| |||| ||||||||| |||||||||||||||    
T  43132402 tggttaactttataatattcctaggaaccatgaaaatagggattataataggtaactatttatgaattta 43132333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 250
Target Start/End: Complemental strand, 8476660 - 8476481
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||| ||||||||||| ||||||||| ||| |||| ||||||||||||||||||||||||||||      ||||        
T  8476660 cttagggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatggaaattttattccaag----gaatttagga 8476565  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
        |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  8476564 aaaatatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 8476481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 68 - 250
Target Start/End: Complemental strand, 53166076 - 53165898
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||||| ||||||||| || |||||| ||| ||||||||||||||||||  |||||||||||||     |||||        
T  53166076 cttagggtgtgtttgtttcaagtttatccaatttatttctaagaataacattccttgaaatataaagatgggtattttattccaag----gtatttagga 53165981  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
        |||||||||||||| ||||||||||| ||| || ||| ||| |||| ||| ||||||||| ||||||||||||||||||    
T  53165980 aaaatatgtttggttaaccttataatattcctaggaatcataaaaatagatattataataggtaactatttatgaatttattc 53165898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 19532964 - 19533042
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    |||||||||||||||||||||||||| ||| |||||||||| ||| |||| ||||||||| ||||||||||||||||||    
T  19532964 tatgtttggttaactttataatattcctaggaaccatgaaaatagggattataataggtaactatttatgaatttattc 19533042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 250
Target Start/End: Original strand, 26848741 - 26848920
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        
T  26848741 cttagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaat----ttagga 26848836  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
        |||||||||||||||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  26848837 aaaatatgtttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 26848920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 33218260 - 33218086
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        |    
T  33218260 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaat----ttaggaaaaat 33218165  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||||||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  33218164 atgtttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 33218086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 1098923 - 1099096
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| |||||||||| |||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |    
T  1098923 ggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaat 1099018  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    |||||||| || ||||||||||||  ||| |||||| ||| ||| |||| |||||||||  |||||||||||||||||    
T  1099019 atgtttggctagctttataatatttctaggaaccataaaaatagggattataataggtaaatatttatgaatttattc 1099096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 10823064 - 10822891
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||| ||||||||| ||| |||  ||||||||||||  ||||||||||||||     |||||        |    
T  10823064 ggtgtgtttgtttcaagtttagcaaatttatttctaggaataacattccttacaatataaagatgagaattttattccaag----gtatttaggaaaaat 10822969  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    ||||||||||||||||||||||||||||| ||||||  || ||| |||| | |||| || |||||||||| |||||||    
T  10822968 atgtttggttaactttataatattcttaggaaccatacaaatagggattattatagataactatttatgattttattc 10822891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 250
Target Start/End: Complemental strand, 31611327 - 31611158
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| |||||||||| ||| |||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        ||||||    
T  31611327 gtttgtttcaagtttaccaaatttattcttatgaataacattccttggaatataaagatgggaattttattccaag----gaatttagaaaaaatatgtt 31611232  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  31611231 tggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 31611158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 250
Target Start/End: Original strand, 44952026 - 44952206
Alignment:
Q  67 acttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnn 166  Q
    ||||| |||| |||||||| ||||||| |||||||||| |||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||       
T  44952026 acttagggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttattccaag----gaatttagg 44952121  T
Q  167 nnnnntatgtttggttaactttataatatt-cttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
         ||||||||||||||||||||||||| ||||| || ||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  44952122 aaaaatatgtttggttaactttataatattccttaggaa-cataaaaatagggattataataggtaaactatttatgaatttattc 44952206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 250
Target Start/End: Complemental strand, 47115199 - 47115030
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        ||||||    
T  47115199 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaatatgtt 47115104  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  47115103 tggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 47115030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 24574291 - 24574465
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||||||||||||||||  ||||||||||||||  || |||          |    
T  24574291 ggtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttgaaatataaagatgagaattttattccaaggaatttat----gaaaaat 24574386  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||  |||| |||||||| | ||||||||||||||||||    
T  24574387 atgtttggttagctttataatattcctaggaaccataaaaataaggattataataggtaaactatttatgaatttattc 24574465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 6231848 - 6231674
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||||||||||||||| | ||||||||||||||      ||||        |    
T  6231848 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttgaaatataaagataggaattttattccaag----gaatttaagaaaaat 6231753  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaatagg-tatctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||  |  |||||||||||||||||    
T  6231752 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggaaaattatttatgaatttattc 6231674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 11239467 - 11239293
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||      ||||        |    
T  11239467 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaag----gaatttaggaaaaat 11239372  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  11239371 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 11239293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 20297517 - 20297691
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||||||||||| |||||||||| |||||||||| |||  ||| ||||||||||||| ||||||||| ||||      ||||        |    
T  20297517 ggtgtgtttgttttaagtttaccaaatttattcttaggaataacattctttggaatataaagatgggaattttatttcaag----gaatttaggaaaaat 20297612  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||||| |||||||||||||| ||| |||||| ||| ||| |||| |||||||| |  |||||||||||||||||    
T  20297613 atgtttggttgactttataatattcctaggaaccataaaaatagggattataataggtaaattatttatgaatttattc 20297691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 250
Target Start/End: Complemental strand, 20414817 - 20414638
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    ||||||||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||| | |   ||||        
T  20414817 cttaaggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaa-aga---atttagga 20414722  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
        |||||||| ||| ||||||||||||| ||  |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  20414721 aaaatatgtttgattagctttataatattcctaagaaccataaaaatagggattataataggtaaactatttatgaatttattc 20414638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 40907990 - 40908070
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||||||||||||||||| ||||||||||||||    
T  40907990 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttgaaatataaagatgggaattttattccaag 40908070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 46359676 - 46359756
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||    
T  46359676 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag 46359756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 250
Target Start/End: Original strand, 29512320 - 29512498
Alignment:
Q  69 ttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnn 168  Q
    |||||||| |||||||| || |||| ||||||||||  ||||||||| ||| |||  ||||||||||||| ||||||||| ||||    | ||||         
T  29512320 ttaaggtgtgtttgtttcaaatttaccaaatttattcctaggaataacattccttagaatataaagatgggaattttatttcaag----aaatttaggaa 29512415  T
Q  169 nnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
       || ||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  29512416 aaatacgtttggttagctttataatattcataggaaccataaaaatagggattataataggtaaactatttatgaatttattc 29512498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 48340104 - 48339930
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||  ||||||||||||  ||||||||||||||  ||    ||        |    
T  48340104 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttagaatataaagatgagaattttattccaaggaat----ttaggaaaaat 48340009  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  48340008 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 48339930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 31267694 - 31267630
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatg 137  Q
    |||| ||||||||||||||||||  |||||||||||||||||| ||||||| |||||||||||||    
T  31267694 ggtgtgtttgttttaagtttatcggatttatttttaggaataacatttcttaaaatataaagatg 31267630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 32070994 - 32071074
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| ||||||||||| |||||||||||||||  || |||||| |||||||| ||||||||||||  ||||||||||||||    
T  32070994 ggtgggtttgttttaaatttatcaaatttattcctatgaataacatttcttggaatataaagatgagaattttattccaag 32071074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 6927820 - 6927891
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||||||||||||||||||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||    
T  6927820 gtttgttttaagtttatcaaatttattactaggaataacattccttggaatataaagatgagaattttattc 6927891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 49216029 - 49216104
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||||||||||||  |||| ||||| ||||||||||| || |||| ||||||||||||| ||||||||||||||    
T  49216029 gtttgttttaagttttccaaaattattcttaggaataatgttccttggaatataaagatgggaattttattccaag 49216104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 250
Target Start/End: Complemental strand, 28124778 - 28124609
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||||||||| ||| ||| |||| |||||||| |||  ||||||||||||||      ||||        ||||||    
T  28124778 gtttgtttcaagtttaccaaatttatttttaggattaacattccttggaatataaatatgagaattttattccaag----gaatttaggaaaaatatgtt 28124683  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||| ||||||||||||| ||  |||||| ||| ||| |||| ||||| || | ||||||||||||||||||    
T  28124682 tggttagctttataatattcctaagaaccataaaaatagggattataatatgtaaactatttatgaatttattc 28124609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 160
Target Start/End: Complemental strand, 38140712 - 38140628
Alignment:
Q  76 gcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatata 160  Q
    |||||||||| || ||||| |||||||||| ||||||||| ||| |||| ||||||||| ||  |||||||||||||| ||||||    
T  38140712 gcgtttgtttcaattttataaaatttatttctaggaataacattccttggaatataaaggtgtgaattttattccaaggtatata 38140628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 43719267 - 43719192
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||||| ||||||| ||||||||||| ||||||||| ||| |||| ||||||||| ||  ||||||||||||||    
T  43719267 gtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagttgagaattttattccaag 43719192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 9320796 - 9320719
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattcc 150  Q
    |||| |||||||| |||||||| |||||||||  ||||||||| ||| |||| ||||||||||||  |||||||||||    
T  9320796 ggtgtgtttgtttcaagtttatgaaatttattcataggaataacattccttggaatataaagatgagaattttattcc 9320719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 12228602 - 12228525
Alignment:
Q  72 aggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    ||||| |||||||  |||||||||||||||||| || ||||||| |||  ||||||||||||||||  ||||||||||    
T  12228602 aggtgtgtttgttacaagtttatcaaatttattcttgggaataacattatttgaaatataaagatgagaattttattc 12228525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 137
Target Start/End: Original strand, 18460582 - 18460641
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatg 137  Q
    |||||||| ||||||||||||||||||| || |||||| |||| | ||||||||||||||    
T  18460582 gtttgtttcaagtttatcaaatttatttctacgaataacatttttcgaaatataaagatg 18460641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 32071266 - 32071325
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggta 231  Q
    |||||||||||||||||||||||||| ||| |||||| ||| || ||||| |||||||||    
T  32071266 tatgtttggttaactttataatattcctaggaaccataaaaataaagattataataggta 32071325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 149
Target Start/End: Complemental strand, 33650356 - 33650285
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||||||| ||||||| |||||||||||||| |||||| |||  ||||||| ||||||||  ||||||||||    
T  33650356 gtttgtttcaagtttaccaaatttatttttatgaataacattatttgaaatctaaagatgagaattttattc 33650285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 153
Target Start/End: Complemental strand, 6832278 - 6832189
Alignment:
Q  64 agaacttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||| | |||| |||||||| || |||| ||||||||||  || |||||| ||| |||| ||||||||||||  ||||||||||||||    
T  6832278 agaactaagggtgtgtttgtttcaaatttaccaaatttattcctaagaataacattacttggaatataaagatgagaattttattccaag 6832189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 111
Target Start/End: Original strand, 13642828 - 13642861
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttagga 111  Q
    ||||||||||||||||||||||||||||||||||    
T  13642828 gtttgttttaagtttatcaaatttatttttagga 13642861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 24783938 - 24784009
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||||||| ||||||| ||||||||||  || |||||| ||| |||| ||||||||||||  ||||||||||    
T  24783938 gtttgtttcaagtttaccaaatttattcataagaataacattccttggaatataaagatgagaattttattc 24784009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 28770556 - 28770469
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatata 160  Q
    |||| |||||||| || |||| ||||||||||  ||||||||| ||| |||| || |||| ||||  |||||||||||||| ||||||    
T  28770556 ggtgtgtttgtttcaaatttaccaaatttattcctaggaataacattccttggaacataatgatgagaattttattccaaggtatata 28770469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 9320700 - 9320622
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttatt 249  Q
    |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||  ||||| || | |||||||||||||||||    
T  9320700 tatgtttggttagctttataatattcctaggaaccataaaaatagggatcataataagtaaactatttatgaatttatt 9320622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 115
Target Start/End: Original strand, 27822995 - 27823037
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataa 115  Q
    |||| |||||||| ||||||| |||||||||||||||||||||    
T  27822995 ggtgtgtttgtttcaagtttaccaaatttatttttaggaataa 27823037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 31436271 - 31436182
Alignment:
Q  71 aaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatata 160  Q
    |||||| |||||||| ||||||| ||||||||||  | | ||||| |||  ||  ||||||||||| | |||||||||||||| ||||||    
T  31436271 aaggtgtgtttgtttcaagtttaccaaatttattcctggaaataacattctttagaatataaagataggaattttattccaaggtatata 31436182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 153
Target Start/End: Original strand, 27093769 - 27093833
Alignment:
Q  89 gtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||||||||||||| |||  ||||||||| |||  ||||||||||||  ||||||||| ||||    
T  27093769 gtttatcaaatttattcttaaaaataatattccttagaatataaagatgtgaattttatttcaag 27093833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 43719177 - 43719141
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccat 208  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  43719177 tatgtttggttagctttataatattcttaggaaccat 43719141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 3e-44; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 100 - 250
Target Start/End: Complemental strand, 6805946 - 6805796
Alignment:
Q  100 ttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtttggttaactttataatattctt 199  Q
    ||||||||| |||||| ||| |||||||||||||||||| |||||||||||||| |||||||||        ||||||||||||||||||||||||||      
T  6805946 ttatttttaagaataacattccttgaaatataaagatgggaattttattccaaggtatatatttaggaaaaatatgtttggttaactttataatattccc 6805847  T
Q  200 agaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  6805846 aggaaccatgaaaatagagattttaataggtatctatttatgaatttattc 6805796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 41432468 - 41432543
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  41432468 gtttgttttaagtttatcaaatttatttttaggaataacatttcttgaaacataaagatggaaattttattccaag 41432543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 72 - 250
Target Start/End: Original strand, 18297835 - 18298010
Alignment:
Q  72 aggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnn 171  Q
    ||||| |||||||| ||||||||||||||||||| ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||            
T  18297835 aggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaa 18297930  T
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||||||| ||||||||||||  ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  18297931 tatgtttggttagctttataatatttctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 18298010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 25837635 - 25837809
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||||||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |    
T  25837635 ggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaat 25837730  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||  |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  25837731 atgtttggttagctttataatattcctatgaaccataaaaatagggattataataggtaaactatttatgaatttattc 25837809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 38363805 - 38363979
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |    
T  38363805 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaat 38363900  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  38363901 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 38363979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 3049733 - 3049907
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||||||||||||||||| |||||||||| |||      ||||        |    
T  3049733 ggtgtgtttgtttcaagtttatcaaatttattcataggaataacattccttgaaatataaagatgggaattttattcgaag----gaatttagaaaaaat 3049828  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| || ||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  3049829 atgtttggttatctttataatattcctaggaatcataaaaatagggattataataggtaaactatttatgaatttattc 3049907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 26061868 - 26062042
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||||||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||      ||||        |    
T  26061868 ggtgtgtttgttttaagtttaccaaatttattcctaggaataacattccttgtaatataaagatgagaattttattccaag----gaatttaggaaaaat 26061963  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||||||||||||||||| ||| |||||| ||| ||| |||| |||||||| |  |||||||||||||||||    
T  26061964 atgtttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaattatttatgaatttattc 26062042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 37392893 - 37392719
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |    
T  37392893 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaat 37392798  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  37392797 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 37392719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 38133085 - 38132911
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| |||||||||| |||||||||| ||| |||| ||||||||||||  ||||||||||||||      ||||        |    
T  38133085 ggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgagaattttattccaag----gaatttaggaaaaat 38132990  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  38132989 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 38132911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 250
Target Start/End: Complemental strand, 10896558 - 10896389
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        ||||||    
T  10896558 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaat----ttaggaaaaatatgtt 10896463  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||| ||||||||||||||||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  10896462 tggttagctttataatattcttaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 10896389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 16313854 - 16313774
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||||  ||||||||||||||    
T  16313854 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgagaattttattccaag 16313774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 249
Target Start/End: Complemental strand, 18726967 - 18726794
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||| ||||||||| |||  ||| |||||||||||| |||||||||||||||      ||||        |    
T  18726967 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattaattggaatataaagatgaaaattttattccaag----gaatttaggaaaaat 18726872  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttatt 249  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | |||||||||||||||||    
T  18726871 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttatt 18726794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 73 - 248
Target Start/End: Complemental strand, 31117873 - 31117699
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||| ||||||||||| |||  ||| ||||||||||||  ||||||||| |||  ||| ||           |    
T  31117873 ggtgtgtttgtttcaagtttatcaaatttatatttaggaataacattcattggaatataaagatgagaattttatttcaaagtatttaga-aaaaaatat 31117775  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttat 248  Q
    ||| ||||||||||||||||||||| ||| |||||| ||| |||| ||| ||||||||| ||||||||||||||||    
T  31117774 atgcttggttaactttataatattcctaggaaccataaaaatagatattataataggtaactatttatgaatttat 31117699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 250
Target Start/End: Original strand, 7930958 - 7931137
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||| ||||||||||| ||||||||| |||  ||| ||||||||||||  ||||||||||||||      ||||        
T  7930958 cttagggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattctttggaatataaagatgagaattttattccaag----gaatttagga 7931053  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
        |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  7931054 aaaatatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 7931137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 35818771 - 35818597
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||      ||||        |    
T  35818771 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaag----gaatttaggaaaaat 35818676  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  35818675 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 35818597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 12710369 - 12710543
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||| || ||           |    
T  12710369 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaagaaatgta----ggaaaaat 12710464  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||| |||| ||||||||||||| ||| |||||| ||| ||  |||| |||||||| | ||||||||||||||||||    
T  12710465 atgtttcgttagctttataatattcctaggaaccataaaaataaggattataataggtaaactatttatgaatttattc 12710543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 250
Target Start/End: Complemental strand, 32661286 - 32661107
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| |||||||  |||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  || |||          
T  32661286 cttagggtgtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttat----ga 32661191  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
        |||||||||||| ||||||||||||| ||  |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  32661190 aaaatatgtttggttagctttataatattcctaagaaccataaaaatagggattataataggtaaactatttatgaatttattc 32661107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 250
Target Start/End: Complemental strand, 40197395 - 40197226
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    ||||| || ||||||| ||||||||||  |||||||||||||  ||| ||||||||||||| |||||||||| |||  ||    ||        ||||||    
T  40197395 gtttgcttcaagtttaccaaatttattcctaggaataatattctttggaatataaagatgggaattttattctaaggaat----ttaggaaaaatatgtt 40197300  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  40197299 tggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 40197226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 250
Target Start/End: Original strand, 42755596 - 42755765
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||| ||||||| ||||||||||||||      ||||        ||| ||    
T  42755596 gtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatatgaagatgggaattttattccaag----gaatttaggaaaaatatatt 42755691  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  42755692 tggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 42755765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 250
Target Start/End: Complemental strand, 5020833 - 5020666
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||||||||||||||||||||||||| |||  ||| ||||||||||||  |||||||||| |||     |||||        ||||||    
T  5020833 gtttgtttcaagtttatcaaatttatttttaggaataacattctttggaatataaagatgataattttattctaag----gtatttaggaaaaatatgtt 5020738  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    |||||||||||||||||||| | | || ||| ||| ||  |||| ||||||||| ||| ||||||||||||||    
T  5020737 tggttaactttataatattc-tgggaatcataaaaatatggattataataggtaactacttatgaatttattc 5020666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 7317196 - 7317273
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    |||||||||||||||||||||||||| ||| |||||||||| ||| |||| ||||||||| ||||||| ||||||||||    
T  7317196 tatgtttggttaactttataatattcctag-aaccatgaaaatagggattataataggtaactatttacgaatttattc 7317273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 250
Target Start/End: Complemental strand, 26602292 - 26602110
Alignment:
Q  65 gaacttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttn 164  Q
    ||||||| |||| |||||||| ||||||| ||||||||||  ||| ||||| ||| ||||||| |||||||||| ||||||||||||||      ||||     
T  26602292 gaacttagggtgtgtttgtttcaagtttaccaaatttattgctagaaataacattccttgaaacataaagatgggaattttattccaag----gaattta 26602197  T
Q  165 nnnnnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
           |||||||||||| ||||||||||||| | | |||||| ||| ||| |||| |||||| | | ||||||||||||||||||    
T  26602196 ggaaaaatatgtttggttagctttataatattccttggaaccataaaaatagggattataatagctaaactatttatgaatttattc 26602110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 34672085 - 34672161
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatat--aaagatggaaattttat 147  Q
    |||| |||||||||||||||||||||||||||||||| ||||| | | ||||||||||  |||||||||||||||||    
T  34672085 ggtgtgtttgttttaagtttatcaaatttatttttagaaataacagtccttgaaatataaaaagatggaaattttat 34672161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 43872312 - 43872232
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||||||| ||||||  ||||||||||| ||||||||| ||| ||||||||||| ||||| |||||||||||||||    
T  43872312 ggtgtgtttgtttcaagtttgccaaatttatttctaggaataacattccttgaaatatatagatgtaaattttattccaag 43872232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 41228965 - 41228886
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||||||| ||||||||||||| |||||||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  41228965 tatgtttggttagctttataatattcctagaaaccataaaaatagggattataataggtaaactatttatgaatttattc 41228886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 37982138 - 37982054
Alignment:
Q  69 ttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatg-gaaattttattccaag 153  Q
    |||||||| |||||||| ||||||| ||||||||||||||||||||| ||| |||| || ||||||||| ||| ||||||||||||    
T  37982138 ttaaggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttg-aacataaagatgagaatttttattccaag 37982054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 25899383 - 25899459
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||| |||||||| |||| || ||||||||||||||||||||| ||| |||| ||||||||||| | ||||||||||    
T  25899383 ggtgtgtttgtttcaagtgtaacaaatttatttttaggaataacattccttggaatataaagataggaattttattc 25899459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 250
Target Start/End: Complemental strand, 21137472 - 21137305
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    ||||||||| |||||||||||||||||  ||| ||||| |||| ||| ||||||||||||  |||||||||  ||| |||    ||        ||||||    
T  21137472 gtttgtttttagtttatcaaatttattactag-aataacattttttggaatataaagatgagaattttattttaaggtat----ttaaaaaaaatatgtt 21137378  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    |||||||||||||||||||| ||| |||||| ||| ||  |||| ||||||||| |||  |||||||||||||    
T  21137377 tggttaactttataatattcctaggaaccataaaaatacggattataataggtaactacatatgaatttattc 21137305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 15226690 - 15226770
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    ||||||||||||| || |||| |||||||||| ||||||||||  || |||| ||||||||||||  ||||||||| ||||    
T  15226690 ggtgcgtttgtttcaattttaccaaatttattattaggaataactttccttggaatataaagatgagaattttatttcaag 15226770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 1554688 - 1554621
Alignment:
Q  87 aagtttatcaaatttatttttaggaataatatttcttgaaatataaa-gatggaaattttattccaag 153  Q
    ||||||| |||||||||| |||||||||| ||| |||| |||||||| ||||| ||||||||||||||    
T  1554688 aagtttaccaaatttattcttaggaataacattccttggaatataaaagatgggaattttattccaag 1554621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 152
Target Start/End: Complemental strand, 33533739 - 33533660
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaa 152  Q
    |||| |||||||| |||||| |||||||||||  |||||||| |||| |||  ||||||||||||  |||||||||||||    
T  33533739 ggtgtgtttgtttcaagtttgtcaaatttattcctaggaatattattcctttgaatataaagatgtgaattttattccaa 33533660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 231
Target Start/End: Complemental strand, 16219293 - 16219134
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||||||||||||| ||||||||  |||||||||  || |||| ||  ||||||||  ||||||||||||||     |||||        
T  16219293 cttagggtgtgtttgttttaagtttatccaatttattcctaggaataacgttccttggaacttaaagatgagaattttattccaag----gtatttagaa 16219198  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggta 231  Q
         ||||||||||||| ||||||||||||| | |||||||||| | | |||| |||||||||    
T  16219197 aaaagatgtttggttaacattataatattcttgggaaccatgaaaatggggattataataggta 16219134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 19160992 - 19160933
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggta 231  Q
    |||||||||||| | ||||||||||||||| |||||| ||| ||| |||| |||||||||    
T  19160992 tatgtttggttagcattataatattcttaggaaccataaaaatagggattataataggta 19160933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 149
Target Start/End: Original strand, 37124070 - 37124149
Alignment:
Q  70 taaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    ||||||| |||| |||||||||||||||||||||| |||  ||||| | |  ||| ||||||||||||  ||||||||||    
T  37124070 taaggtgtgtttattttaagtttatcaaatttattgttaaaaataacaatatttggaatataaagatgagaattttattc 37124149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 250
Target Start/End: Complemental strand, 29421736 - 29421662
Alignment:
Q  176 tttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    |||| ||||||||||||||||| ||| |||||| ||| ||| |||| ||||||||| |||  ||| |||||||||    
T  29421736 tttgattaactttataatattcctaggaaccataaaaatagggattataataggtaactacatataaatttattc 29421662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 248
Target Start/End: Complemental strand, 33444969 - 33444798
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| |||||||   ||||||||  || |||||| ||||| || |||||||||||| |||||||||| |||| |||    ||        |    
T  33444969 ggtgtgtttgtttcaagtttactgaatttattcataagaataacatttcatggaatataaagatgaaaattttatttcaaggtat----ttagaaaaaat 33444874  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttat 248  Q
    ||||||||||||||||||||||||| ||| || |||  || ||| |||| ||||||||| |||  |||||| ||||    
T  33444873 atgtttggttaactttataatattcctagcaatcatacaaatagtgattctaataggtaactacatatgaaattat 33444798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 35394210 - 35394280
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatga 242  Q
    |||||||||||||||||||||||||| ||  |||||| ||| ||  |||| ||||||||| |||| |||||    
T  35394210 tatgtttggttaactttataatattcctatgaaccataaaaataaggattataataggtaactatatatga 35394280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 19161088 - 19161024
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatg 137  Q
    |||| |||||||| |||||||||||||||||| | | |||||| |||  ||| ||||||||||||    
T  19161088 ggtgtgtttgtttcaagtttatcaaatttattctcaagaataacattctttggaatataaagatg 19161024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 69 - 250
Target Start/End: Original strand, 27480731 - 27480908
Alignment:
Q  69 ttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnn 168  Q
    |||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||     |||||         
T  27480731 ttaaggtgtgtttattttaagtttaccaaatttatttttaggaataatatttcttgaaatataaagatgagaattttatttcaag----gtatttagaaa 27480826  T
Q  169 nnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
       |||| ||||||||||||||||||||  ||  |||||| ||| |||| ||| ||||||||| ||||||||||||||||||    
T  27480827 aaatatgcttggttaactttataatatttctatgaaccataaaaatagaaattataataggtagctatttatgaatttattc 27480908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 12970877 - 12970703
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||| ||||||||| ||| |||| ||||||||||||  ||||||||||||||      ||||        |    
T  12970877 ggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgagaattttattccaag----gaatttaggaaaaat 12970782  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  12970781 atgtttggttagctttataatattcataggaaccataaaaatagggattgtaataggtaaactatttatgaatttattc 12970703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 250
Target Start/End: Complemental strand, 556054 - 555879
Alignment:
Q  72 aggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnn 171  Q
    ||||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||            
T  556054 aggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaa 555959  T
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  555958 tatgtttggttagctttataatattcctaggaaccatcaaattagggattataataggtaaactatttatgaatttattc 555879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 8406613 - 8406698
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||| |||||||| ||||||||||||||||||| ||||||||| ||| |||| ||||||||||||| ||||||||||||||    
T  8406613 cttagggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaag 8406698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 22936259 - 22936085
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |    
T  22936259 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaat 22936164  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  22936163 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 22936085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 28602280 - 28602454
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||||||||||||| ||| |||| ||||||||||| | ||||||||||||||      ||||        |    
T  28602280 ggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttggaatataaagataggaattttattccaag----gaatttaggaaaaat 28602375  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| ||||||  || ||| |||| |||||||| | ||||||||||||||||||    
T  28602376 atgtttggttagctttataatattcctaggaaccatacaaatagggattataataggtaaactatttatgaatttattc 28602454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 29543362 - 29543188
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |    
T  29543362 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttagaaaaaat 29543267  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  29543266 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 29543188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 250
Target Start/End: Complemental strand, 11855997 - 11855828
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        ||||||    
T  11855997 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaat----ttaggaaaaatatgtt 11855902  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  11855901 tggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 11855828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 250
Target Start/End: Original strand, 18411926 - 18412107
Alignment:
Q  66 aacttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnn 165  Q
    |||||| |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||      ||||      
T  18411926 aacttagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaag----gaatttag 18412021  T
Q  166 nnnnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
          |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  18412022 gaaaaatatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 18412107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 26637368 - 26637288
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||| ||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||||| ||||||||||||||    
T  26637368 ggtgtgtttatttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgggaattttattccaag 26637288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 78 - 250
Target Start/End: Original strand, 1664460 - 1664628
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  |  ||||||||||||||||||||||||||||  ||||||||| ||||     |||||        ||||||    
T  1664460 gtttgtttcaagtttaccaaatttattcctgagaataatatttcttgaaatataaagatgagaattttatttcaag----gtatttagaaaaaatatgtt 1664555  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    |||||||||||||||||||||||  |||||| ||| ||| |||| ||||||||| |||  ||| |||||||||    
T  1664556 tggttaactttataatattcttatgaaccataaaaatagggattataataggtaactacatataaatttattc 1664628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 32535661 - 32535835
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| |||||||||| |||||||||| ||| |||| ||||||||||||| ||||||| ||||||      ||||        |    
T  32535661 ggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttaatccaag----gaatttaggaaaaat 32535756  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| |||||||||||||| || |||||| ||| ||| | || |||||||| | ||||||||||||||||||    
T  32535757 atgtttggttagctttataatattctcaggaaccataaaaataggggttataataggtaaactatttatgaatttattc 32535835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 250
Target Start/End: Complemental strand, 19065847 - 19065678
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        ||||||    
T  19065847 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttagaaaatatatgtt 19065752  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||| ||||||||||||| ||| |||||| ||  ||| |||| |||||||| | ||||||||||||||||||    
T  19065751 tggttagctttataatattcctaggaaccataaatatagggattataataggtaaactatttatgaatttattc 19065678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 250
Target Start/End: Original strand, 27481086 - 27481255
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||      ||||        ||||||    
T  27481086 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaag----gaatttaggaaaaatatgtt 27481181  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||| ||||||||||||| ||| |||||| ||| |||||||| ||||| || | ||||||||||||||||||    
T  27481182 tggttagctttataatattcctaggaaccataaaaatagagattataatatgtaaactatttatgaatttattc 27481255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 250
Target Start/End: Complemental strand, 4765912 - 4765733
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  |||||||||| |||  ||    ||        
T  4765912 cttagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattctaaggaat----ttagga 4765817  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
        |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  4765816 aaaatatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 4765733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 14207073 - 14206994
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||||||||||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  14207073 tatgtttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 14206994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 145
Target Start/End: Original strand, 20962289 - 20962356
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaatttt 145  Q
    |||||||||||||||||||||||||||  ||||||||| ||| |||| || |||||||||||||||||    
T  20962289 gtttgttttaagtttatcaaatttattcataggaataacattccttggaacataaagatggaaatttt 20962356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 28429452 - 28429531
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaa 152  Q
    |||| |||||||| ||||||| ||||||||||| ||| ||||| ||| |||||||||||||||||  |||||||||||||    
T  28429452 ggtgtgtttgtttcaagtttaccaaatttatttctagaaataacattccttgaaatataaagatgtgaattttattccaa 28429531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 6091439 - 6091613
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||      ||||        |    
T  6091439 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaag----gaatttaggaaaaat 6091534  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| |||  ||| |||||||| |  |||||||||||||||||    
T  6091535 atgtttggttagctttataatattcctaggaaccataaaaataggaattataataggtaaattatttatgaatttattc 6091613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 206
Target Start/End: Original strand, 6930366 - 6930495
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||||||||||||||||||||||  || |||||| ||| |||||||||| ||||||  |||||||||  |||     |||||        |    
T  6930366 ggtgtgtttgttttaagtttatcaaatttattcatatgaataacattccttgaaatatcaagatgagaattttattttaag----gtatttaaaaaaaat 6930461  T
Q  173 atgtttggttaactttataatattcttagaaacc 206  Q
    ||||||||||||||||||||||||| ||||||||    
T  6930462 atgtttggttaactttataatattcctagaaacc 6930495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 31583401 - 31583322
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatat 157  Q
    ||||||||||||||||  |||||||||| || |||||| |||  |||||| |||||||||||||| ||||| ||||||||    
T  31583401 gtttgttttaagtttactaaatttatttctacgaataacattctttgaaacataaagatggaaatattatttcaagatat 31583322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 36703693 - 36703772
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  36703693 tatgtttggttagctttataatattcctaggaaccatcaaaatagggattataataggtaaactatttatgaatttattc 36703772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 8646732 - 8646657
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||||| |||||||  |||||||||  ||||||||| ||| |||| ||||||||||| | ||||||||||||||    
T  8646732 gtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagataggaattttattccaag 8646657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 145
Target Start/End: Complemental strand, 42012526 - 42012459
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaatttt 145  Q
    |||||||| |||||||  |||||||||||||||||||| |||| ||| |||| |||||||| ||||||    
T  42012526 gtttgtttcaagtttactaaatttatttttaggaataacattttttggaataaaaagatgggaatttt 42012459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 35603094 - 35603045
Alignment:
Q  100 ttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||||||||||||||| |||| ||| ||||||||||| ||||||||||||    
T  35603094 ttatttttaggaataacattttttggaatataaagatagaaattttattc 35603045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 35348862 - 35348797
Alignment:
Q  83 ttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttatt 148  Q
    |||||||||||||||||||||| ||| |||||| |||  ||| || |||||||||  |||||||||    
T  35348862 ttttaagtttatcaaatttattcttaagaataacattcattggaacataaagatgagaattttatt 35348797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 14207168 - 14207088
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||||||| |||||||  |||||||||  ||||||||| |||  ||| ||||||||||||  ||||||||| ||||    
T  14207168 ggtgtgtttgtttcaagtttacaaaatttattcctaggaataacattcattggaatataaagatgagaattttatttcaag 14207088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 43347241 - 43347177
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatg 137  Q
    |||| |||||||| ||||||   ||||||||| |||||||||| |||| ||| ||||||||||||    
T  43347241 ggtgtgtttgtttcaagttttcgaaatttattcttaggaataacatttattggaatataaagatg 43347177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 7e-33; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 78 - 250
Target Start/End: Complemental strand, 30686333 - 30686165
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||| |||||||||||| |||||||||| ||||     |||||        ||||||    
T  30686333 gtttgttttaagtttatcaaatttatttctaggaataacattccttggaatataaagatgaaaattttattgcaag----gtatttaggaaaaatatgtt 30686238  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    |||||||||||||||||||| ||| |||||| ||| ||| |||| ||||| ||| ||||||||||||||||||    
T  30686237 tggttaactttataatattcctaggaaccataaaaatagcgattataataagtaactatttatgaatttattc 30686165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 72 - 250
Target Start/End: Complemental strand, 27419572 - 27419397
Alignment:
Q  72 aggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnn 171  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||| | |   ||||            
T  27419572 aggtgtgtttgtttcaagtttaccaaatttatttttaggaataacatttcttggaatataaagatgggaattttattccaa-aga---atttagaaaaaa 27419477  T
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||||||| ||||||||||||| |||  ||||| ||| |||||||| |||||||| | ||||||||||||||||||    
T  27419476 tatgtttggttagctttataatattcctagggaccataaaaatagagattataataggtaaactatttatgaatttattc 27419397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 78 - 250
Target Start/End: Original strand, 45045355 - 45045524
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| |||||||||| |||||||||||||| |||| ||||||||||||| ||||||||||||||      ||||        ||||||    
T  45045355 gtttgtttcaagtttaccaaatttattcttaggaataatattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaatatgtt 45045450  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  45045451 tggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 45045524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 68 - 250
Target Start/End: Original strand, 44565764 - 44565943
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||||||||||||||||||||||||||      ||||        
T  44565764 cttagggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatggaaattttattccaag----gaatttagga 44565859  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
        |||||||||||| ||||||||||||| ||| |||||| ||| ||  |||| |||||||| | ||||||||||||||||||    
T  44565860 aaaatatgtttggttagctttataatattcctaggaaccataaaaatatggattataataggtaaactatttatgaatttattc 44565943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 45265395 - 45265221
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |    
T  45265395 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaat 45265300  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  45265299 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 45265221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 33378558 - 33378732
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  || |||          |    
T  33378558 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttat----gaaaaat 33378653  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  33378654 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 33378732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 250
Target Start/End: Complemental strand, 37534444 - 37534276
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||||||||||||||| ||| ||||| ||| |||| ||||||||||||  ||||||||| |||| |||    ||        ||||||    
T  37534444 gtttgtttcaagtttatcaaatttatttctagaaataacattccttggaatataaagatgagaattttatttcaaggtat----ttaggaaaaatatgtt 37534349  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    |||||||||||||||||||||||| ||| || | | ||| |||| ||||| ||| ||||||||||||||||||    
T  37534348 tggttaactttataatattcttaggaactataataatagggattataataagtaactatttatgaatttattc 37534276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 250
Target Start/End: Complemental strand, 34930817 - 34930640
Alignment:
Q  70 taaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnn 169  Q
    ||||||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  || |||            
T  34930817 taaggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttat----gaaa 34930722  T
Q  170 nntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
      |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||| | | ||||||||||||||||||    
T  34930721 aatatgtttggttagctttataatattcctaggaaccataaaaatagggattataatagataaactatttatgaatttattc 34930640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 247
Target Start/End: Complemental strand, 9947338 - 9947166
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||| ||||||||| ||| |||| ||||||||||||| ||||||||||||||  || ||           |    
T  9947338 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttgtaatataaagatgggaattttattccaaggaatgta---gaaaaaaat 9947242  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaattta 247  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | |||||||||||||||    
T  9947241 atgtttggttagctttataatattcataggaaccataaaaatagggattgtaataggtaaactatttatgaattta 9947166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 35488536 - 35488362
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |    
T  35488536 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaat 35488441  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  35488440 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 35488362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 45722897 - 45722961
Alignment:
Q  87 aagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattcca 151  Q
    ||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  45722897 aagtttaccaaatttatttttaggaataacattccttgaaatataaagatggaaattttattcca 45722961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 27214202 - 27214028
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  || |||          |    
T  27214202 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttat----gaaaaat 27214107  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| |||  || |||| |||||||| | ||||||||||||||||||    
T  27214106 atgtttggttagctttataatattcctaggaaccataaaaacagggattataataggtaaactatttatgaatttattc 27214028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 78 - 250
Target Start/End: Original strand, 39553911 - 39554081
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| |||||||||||||||||| |||| ||||| ||| |||| ||||||||||||| ||||||||||||||  ||   ||         ||| ||    
T  39553911 gtttgtttgaagtttatcaaatttattcttagtaataacattccttggaatataaagatgggaattttattccaaggaat---ttaggaaaaaatatttt 39554007  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  39554008 tggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 39554081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 79 - 250
Target Start/End: Original strand, 43948975 - 43949143
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgttt 178  Q
    ||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |||||||    
T  43948975 tttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaatatgttt 43949070  T
Q  179 ggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  43949071 ggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 43949143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 48341088 - 48341261
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| |||||||||| |||| ||||||||||||  || |||          |    
T  48341088 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagagggaa-ttttattccaaggaatttat----gaaaaat 48341182  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||||||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  48341183 atgtttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 48341261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 11329717 - 11329891
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||      ||||        |    
T  11329717 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaag----gaatttaggaaaaat 11329812  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  11329813 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 11329891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 250
Target Start/End: Original strand, 44819983 - 44820152
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||||||||||||| ||| ||| |||||||||||||  ||||||||||||||      ||||        ||| ||    
T  44819983 gtttgtttcaagtttaccaaatttatttttaggaataacattccttaaaatataaagatgagaattttattccaag----gaatttaggaaaaatatatt 44820078  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| || | |||||||| | ||||||||||||||||||    
T  44820079 tggttagctttataatattcctaggaaccataaaaatagggactataataggtaaactatttatgaatttattc 44820152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 48313846 - 48313922
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||| |||||||| ||||||||||||||||||| ||||||||| |||||||| ||||||||||||  ||||||||||    
T  48313846 ggtgtgtttgtttcaagtttatcaaatttatttctaggaataacatttcttggaatataaagatgagaattttattc 48313922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 31598452 - 31598527
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||| ||||||||||| | ||||||||| ||||    
T  31598452 gtttgttttaagtttaccaaatttatttttgggaataacatttcttggaatataaagataggaattttatttcaag 31598527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 250
Target Start/End: Original strand, 38543932 - 38544092
Alignment:
Q  87 aagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtttggttaact 186  Q
    |||||||  ||||||||| |||||||||| ||| |||| ||||||||||||  ||||||||||||||| ||    ||        |||||||||||| ||    
T  38543932 aagtttactaaatttattcttaggaataacattccttggaatataaagatgagaattttattccaagaaat----ttaggaaaaatatgtttggttagct 38544027  T
Q  187 ttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  38544028 ttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 38544092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 48160920 - 48160746
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| |||||||  |||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  || |||          |    
T  48160920 ggtgtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttat----gaaaaat 48160825  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| |  |||||||||||||||||    
T  48160824 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaattatttatgaatttattc 48160746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 250
Target Start/End: Original strand, 25097797 - 25097967
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataata-tttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgt 176  Q
    |||||||||||||||| ||||||||||  ||||||||||| ||| ||| ||||||||||||  ||||||||||||||      ||||        |||||    
T  25097797 gtttgttttaagtttaccaaatttattcctaggaataatatttttttggaatataaagatgagaattttattccaag----gaatttaggaaaaatatgt 25097892  T
Q  177 ttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||| ||||||||||||| ||| |||||| ||  ||| |||| |||||||| | ||||||||||||||||||    
T  25097893 ttggttagctttataatattcctaggaaccataaatatagggattataataggtaaactatttatgaatttattc 25097967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 28904533 - 28904359
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  |||||||||| |||  ||    ||        |    
T  28904533 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattctaaggaat----ttaggaaaaat 28904438  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||||||||||||||||| ||| |||||| ||| ||  |||| |||||||| | ||||||||||||||||||    
T  28904437 atgtttggttaactttataatattcctaggaaccataaaaatatggattataataggtaaactatttatgaatttattc 28904359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 22156520 - 22156438
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatata 160  Q
    |||||||| || |||||||||||||||||||||||||| |||| ||| |||||||||||   |||||||||| ||| ||||||    
T  22156520 gtttgtttcaaatttatcaaatttatttttaggaataacattttttggaatataaagataagaattttattctaaggtatata 22156438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 22212435 - 22212353
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatata 160  Q
    |||||||| || |||||||||||||||||||||||||| |||| ||| |||||||||||   |||||||||| ||| ||||||    
T  22212435 gtttgtttcaaatttatcaaatttatttttaggaataacattttttggaatataaagataagaattttattctaaggtatata 22212353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 250
Target Start/End: Complemental strand, 8419900 - 8419762
Alignment:
Q  109 ggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtttggttaactttataatattcttagaaaccat 208  Q
    ||||||| ||| |||| ||||||||||||| ||||||||||||||| ||    ||        |||||||||||| ||||||||||||| ||| ||||||    
T  8419900 ggaataacattccttggaatataaagatgggaattttattccaagaaat----ttaggaaaaatatgtttggttagctttataatattcctaggaaccat 8419805  T
Q  209 gaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
     ||| ||| |||| |||||||| | ||||||||||||||||||    
T  8419804 aaaaatagggattataataggtaaactatttatgaatttattc 8419762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 157
Target Start/End: Complemental strand, 17276506 - 17276422
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatat 157  Q
    |||| |||||||| || ||||  |||||||||| ||||||||| ||| |||| |||||| ||||| |||||||||||||||||||    
T  17276506 ggtgtgtttgtttcaattttacaaaatttatttctaggaataacattccttggaatatatagatgtaaattttattccaagatat 17276422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 250
Target Start/End: Original strand, 27248022 - 27248191
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  ||||||||| ||| |||  ||||||||||||| ||||||||||||||      ||||        ||||||    
T  27248022 gtttgtttcaagtttaccaaatttattcctaggaataacattccttagaatataaagatgggaattttattccaag----gaatttaggaaaaatatgtt 27248117  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||| ||||||||||||| ||  ||| || ||| ||| |||| |||||||| | ||||||||||||||||||    
T  27248118 tggttagctttataatattcctatgaactataaaaatagggattataataggtaaactatttatgaatttattc 27248191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 25924984 - 25924810
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| | ||||| ||||||||||  || |||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        |    
T  25924984 ggtgtgtttgtttcatgtttaccaaatttattcctaagaataacattccttggaatataaagatgagaattttattccaaggaat----ttaggaaaaat 25924889  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||  |||| |||||||| | ||||||||||||||||||    
T  25924888 atgtttggttagctttataatattcctaggaaccataaaaatatggattataataggtaaactatttatgaatttattc 25924810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 43569936 - 43569859
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttatt 249  Q
    |||||||| |||||||||||||||| ||||||| ||| ||| ||| |||| |||||| ||  ||||||||||||||||    
T  43569936 tatgtttgattaactttataatatttttagaaatcataaaaatagggattataatagataattatttatgaatttatt 43569859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 45448666 - 45448840
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  || |||||| ||| |||| ||||||||||||| |||||||||| ||   | | ||||        |    
T  45448666 ggtgtgtttgtttcaagtttaccaaatttattcctatgaataacattccttggaatataaagatgggaattttattctaa---aga-atttaggaaaaat 45448761  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||  |||| |||||| | | ||||||||||||||||||    
T  45448762 atgtttggttagctttataatattcctaggaaccataaaaataaggattataatagataaactatttatgaatttattc 45448840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 45722978 - 45723046
Alignment:
Q  181 ttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttatt 249  Q
    ||||||||||||||||| |||||| ||| ||| ||  |||| ||||||||| |||||||||||||||||    
T  45722978 ttaactttataatattcctagaaatcataaaaatatggattataataggtaactatttatgaatttatt 45723046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 9814466 - 9814387
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||| ||| ||||||||||||| ||| |||||| ||| |||||||| |||||| | | ||||||||||||||||||    
T  9814466 tatgtttgattagctttataatattcctaggaaccataaaaatagagattataatagataaactatttatgaatttattc 9814387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 133
Target Start/End: Original strand, 24769243 - 24769298
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaa 133  Q
    |||||||| || ||||||||||||||||||| ||||||||||| || |||||||||    
T  24769243 gtttgtttgaaatttatcaaatttatttttaagaataatattttttaaaatataaa 24769298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 40212708 - 40212787
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||| | | ||||||||||||||||||    
T  40212708 tatgtttggttagctttataatattcctaggaaccataaaaatagggattataatagataaactatttatgaatttattc 40212787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 41684273 - 41684196
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttatt 249  Q
    ||||||||||||| |||||||||||  ||| |||||| ||| |||||||| ||||||||| |||  ||| ||||||||    
T  41684273 tatgtttggttaattttataatatttataggaaccataaaaatagagattataataggtaactacatataaatttatt 41684196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 5543477 - 5543401
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||| |||||||||||||||| ||||||||||| || |||||  |||  |||||| |||||||||  ||||||||||    
T  5543477 ggtgtgtttgttttaagtttaccaaatttatttctaagaatatcattatttgaaacataaagatgagaattttattc 5543401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 18823891 - 18823962
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||||||| ||||||| ||||||||||  ||||||||| |||  ||| ||||||||||||  ||||||||||    
T  18823891 gtttgtttcaagtttaccaaatttattcctaggaataacattctttggaatataaagatgagaattttattc 18823962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 38396618 - 38396539
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaatagg-tatctatttatgaatttattc 250  Q
    |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||  |  |||||||||||||||||    
T  38396618 tatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggaaaattatttatgaatttattc 38396539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 41632616 - 41632537
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||||||| ||||||||||||| ||  |||||| ||| ||  |||| |||||||| | ||||||||||||||||||    
T  41632616 tatgtttggttagctttataatattcctatgaaccataaaaatatggattataataggtaaactatttatgaatttattc 41632537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 6656722 - 6656644
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    ||||||| |||||||||||||||||  ||  |||||  ||| || ||||| ||||||||| |||||||||| |||||||    
T  6656722 tatgttttgttaactttataatatttctaagaaccaaaaaaatatagattataataggtaactatttatgactttattc 6656644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 16825593 - 16825527
Alignment:
Q  185 ctttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  16825593 ctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 16825527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 250
Target Start/End: Complemental strand, 6656457 - 6656396
Alignment:
Q  189 ataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    ||||||||||||| |||||  ||| || ||||| ||||||||| |||||||||| |||||||    
T  6656457 ataatattcttaggaaccaaaaaaatacagattataataggtaactatttatgattttattc 6656396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 40385960 - 40385899
Alignment:
Q  87 aagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttatt 148  Q
    |||| ||||||||||||| |||| ||||| |||| ||| ||||||||||||  |||||||||    
T  40385960 aagtgtatcaaatttattcttagtaataacattttttggaatataaagatgagaattttatt 40385899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 38396712 - 38396633
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||||||| ||||||||||||||||||  ||||||||  |||  ||| ||||| ||||| | ||||||||||||||    
T  38396712 ggtgtgtttgtttcaagtttatcaaatttattcctaggaatagcattcattggaatat-aagataggaattttattccaag 38396633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 7e-33; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 78 - 250
Target Start/End: Original strand, 3902186 - 3902354
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| || |||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||    ||||||        ||||||    
T  3902186 gtttgtttcaagtttaccatatttatttttaggaataacattccttgaaatataaagatgggaattttattccaag----atatttagaaaaaatatgtt 3902281  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    ||||||||||||||||||||  || |||||| ||| ||| |||| ||||||||| |||| |||||||||||||    
T  3902282 tggttaactttataatattcacaggaaccataaaaatagggattataataggtaactatatatgaatttattc 3902354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 78 - 250
Target Start/End: Complemental strand, 28312038 - 28311870
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| |||||||||||||| |||    ||        ||||||    
T  28312038 gtttgtttcaagtttaccaaatttattcataggaataacattccttggaatataaagatgggaattttattccaaggtat----ttaggaaaaatatgtt 28311943  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    |||||||||||||||||||| ||| |||||||||| ||| |||| ||||||||| ||||||||||||||||||    
T  28311942 tggttaactttataatattcctaggaaccatgaaaatagggattataataggtaactatttatgaatttattc 28311870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 250
Target Start/End: Original strand, 37233159 - 37233327
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| |||||||||||||| |||    ||        ||||||    
T  37233159 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggtat----ttaggaaaaatatgtt 37233254  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    |||||||||||||||||||| ||| |||||||||| ||  |||| ||||||||| ||||||||||||||||||    
T  37233255 tggttaactttataatattcctaggaaccatgaaaataaggattataataggtaactatttatgaatttattc 37233327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 20426829 - 20426656
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||| |||    | |||||        |    
T  20426829 ggtgtgtttgtttaaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttatttcaa----tgtatttagaaaaaat 20426734  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    ||||||||||||||||||||||||| ||  |||||| ||| |||||||| ||||||||| ||||||||||||||||||    
T  20426733 atgtttggttaactttataatattcctaccaaccataaaaatagagattataataggtaactatttatgaatttattc 20426656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 68 - 250
Target Start/End: Original strand, 11071324 - 11071503
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||||||||||||||||| ||||||||||||||      ||||        
T  11071324 cttagggtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttgaaatataaagatgggaattttattccaag----gaatttagga 11071419  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
        |||||||||||||||||||||||||| ||| |||||| ||| ||  |||| |||||||| | ||||||||||||||||||    
T  11071420 aaaatatgtttggttaactttataatattcctaggaaccataaaaatatggattataataggtaaactatttatgaatttattc 11071503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 17965707 - 17965881
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||| ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |    
T  17965707 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaat 17965802  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  17965803 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 17965881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 41729477 - 41729303
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| |||||||||| |||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |    
T  41729477 ggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaat 41729382  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  41729381 atgtttggttagctttataatattcctagtaaccataaaaatagggattataataggtaaactatttatgaatttattc 41729303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 2050590 - 2050670
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||||| ||||||||||||||    
T  2050590 ggtgtgtttgtttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgggaattttattccaag 2050670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 7007309 - 7007482
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||  |||||||||| |    |  |||||        |    
T  7007309 ggtgtgtttgttttaagtttaccaaatttattattaggaataacatttcttgaaatataaagatgagaattttattcta----aagtatttagaaaaaat 7007404  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    ||||||||||||||||||||||||| ||  |||||| ||| ||| || | ||||||||| |||  |||||||||||||    
T  7007405 atgtttggttaactttataatattcctaagaaccattaaaatagggagtataataggtaactacatatgaatttattc 7007482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 78 - 250
Target Start/End: Complemental strand, 9734188 - 9734019
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||||||||||| ||||||||||| ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        ||||||    
T  9734188 gtttgttttaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaatatgtt 9734093  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||  ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  9734092 tggttggctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 9734019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 67 - 250
Target Start/End: Complemental strand, 346698 - 346518
Alignment:
Q  67 acttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnn 166  Q
    ||||| |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||       
T  346698 acttagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttagg 346603  T
Q  167 nnnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
         |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  346602 aaaaatatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 346518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 250
Target Start/End: Original strand, 6171510 - 6171689
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        
T  6171510 cttagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttagga 6171605  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
        |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  6171606 aaaatatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 6171689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 78 - 250
Target Start/End: Complemental strand, 21737750 - 21737581
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| |||||||||| |||||||||| ||| |||| |||||||| |||| ||||||||||||||  || |||          ||||||    
T  21737750 gtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaatatgggaattttattccaaggaatttat----gaaaaatatgtt 21737655  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  21737654 tggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 21737581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 638318 - 638492
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| ||||| |||||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |    
T  638318 ggtgtgtttgatttaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaagaaaaat 638413  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  638414 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 638492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 4559283 - 4559457
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||| || |||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |    
T  4559283 ggtgtgtttgtttcaagtttaccaaatttatttctaagaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaat 4559378  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  4559379 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 4559457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 14777845 - 14777671
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |    
T  14777845 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaat 14777750  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| ||| || ||| ||| |||| |||||||| | ||||||||||||||||||    
T  14777749 atgtttggttagctttataatattcctaggaactataaaaatagggattataataggtaaactatttatgaatttattc 14777671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 37192246 - 37192420
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||| ||||||||| ||| |||| ||||||||||||  ||||||||||||||      ||||        |    
T  37192246 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgagaattttattccaag----gaatttaggaaaaat 37192341  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  37192342 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 37192420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 42675008 - 42674834
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| |||||||| ||||||||||| | ||||||||||||||      ||||        |    
T  42675008 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacatttcttggaatataaagataggaattttattccaag----gaatttaggaaaaat 42674913  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  42674912 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 42674834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 250
Target Start/End: Original strand, 13760696 - 13760865
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||  ||||||||||| ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        ||||||    
T  13760696 gtttgtttcaagtttgccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttagaaaaaatatgtt 13760791  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  13760792 tggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 13760865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 250
Target Start/End: Complemental strand, 27358303 - 27358136
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgttt 178  Q
    ||||||||||||||| ||||||||||  ||||||||| |||| ||| ||||||||||||  ||||||||| |||| |||    ||        |||||||    
T  27358303 tttgttttaagtttaccaaatttattcctaggaataacatttattggaatataaagatgagaattttatttcaaggtat----ttagcaaaaatatgttt 27358208  T
Q  179 ggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    | |||| |||||||||||| ||| |||||| ||| ||  |||| ||||||||| ||||||||||||||||||    
T  27358207 gattaaatttataatattcctaggaaccataaaaataaggattataataggtaactatttatgaatttattc 27358136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 5770457 - 5770283
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||| ||||||||| ||| |||| ||||||||||| | ||||||||||||||      ||||        |    
T  5770457 ggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagataggaattttattccaag----gaatttaagaaaaat 5770362  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaatagg-tatctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||  |  |||||||||||||||||    
T  5770361 atgtttggttagctttataatattcctagcaaccataaaaatagggattataataggaaaattatttatgaatttattc 5770283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 14403553 - 14403477
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatat--aaagatggaaattttat 147  Q
    |||| |||||||||||||||||||||||||||||||| ||||| | ||||||||||||  |||||||||||||||||    
T  14403553 ggtgagtttgttttaagtttatcaaatttatttttagaaataacagttcttgaaatataaaaagatggaaattttat 14403477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 249
Target Start/End: Original strand, 45408981 - 45409147
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgttt 178  Q
    ||||||||||||||| ||||||||||  ||||||||| |||| ||| ||||||||||||  ||||||||||||||     |||||        |||||||    
T  45408981 tttgttttaagtttaccaaatttattcctaggaataacatttattggaatataaagatgagaattttattccaag----gtatttagcaaaaatatgttt 45409076  T
Q  179 ggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttatt 249  Q
    | |||| |||||||||||  ||| |||||| ||| ||  |||| ||||||||| |||||||||||||||||    
T  45409077 gattaaatttataatatttctaggaaccataaaaataaggattataataggtaactatttatgaatttatt 45409147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 250
Target Start/End: Original strand, 26309996 - 26310165
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  ||||||||  ||| |||| ||||||||||||| ||||||||| ||||| ||    ||        |||| |    
T  26309996 gtttgtttcaagtttaccaaatttattcctaggaatagcattccttggaatataaagatgggaattttattacaagaaat----ttaggaaaaatatggt 26310091  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||| ||||||||||||||||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  26310092 tggttagctttataatattcttaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 26310165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 13790019 - 13790090
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||||||| ||||||||||||||||||| ||||||||| ||| ||||||||||| ||||| |||||||||||    
T  13790019 gtttgtttcaagtttatcaaatttatttgtaggaataacattccttgaaatatatagatgtaaattttattc 13790090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 153
Target Start/End: Complemental strand, 5003189 - 5003102
Alignment:
Q  66 aacttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||||| |||||||| || |||| ||||||||||| ||||||||| ||| |||| ||||||||||||  ||||||||||||||    
T  5003189 aactaaaggtgtgtttgtttaaaatttaccaaatttatttataggaataacattccttggaatataaagatgcgaattttattccaag 5003102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 39995391 - 39995312
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||||||||||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  39995391 tatgtttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 39995312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 153
Target Start/End: Original strand, 40569735 - 40569822
Alignment:
Q  66 aacttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||| |||| |||||||| ||||||| ||||||||||| ||||||||| ||| |||| |||||| | ||| |||||||||||||||    
T  40569735 aacttagggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatatatatatgtaaattttattccaag 40569822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 250
Target Start/End: Complemental strand, 40951201 - 40951032
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| || |||| ||||||||||  ||||||||| ||| |||| |||||||||||| |||||||||||||| | |   ||||        ||||||    
T  40951201 gtttgtttcaaatttaccaaatttattcctaggaataacattccttggaatataaagatgaaaattttattccaa-aga---atttaggaaaaatatgtt 40951106  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||| ||||||||||||| ||  |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  40951105 tggttagctttataatattcctaagaaccataaaaatagggattataataggtaaactatttatgaatttattc 40951032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 250
Target Start/End: Original strand, 2521434 - 2521573
Alignment:
Q  108 aggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtttggttaactttataatattcttagaaacca 207  Q
    |||||||| ||| |||| ||||||||||||||||||||||||||||  ||    ||        |||||||||||| ||||||||||||| ||| |||||    
T  2521434 aggaataacattccttggaatataaagatggaaattttattccaaggaat----ttaggaaaaatatgtttggttagctttataatattcctaggaacca 2521529  T
Q  208 tgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    | ||| ||| |||| |||||||| | ||||||||||||||||||    
T  2521530 taaaaatagggattataataggtaaactatttatgaatttattc 2521573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 152
Target Start/End: Original strand, 4875501 - 4875579
Alignment:
Q  74 gtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaa 152  Q
    |||| ||||||| |||||| ||||||||||| ||||||||||||||  ||| ||||||||||||  |||||||||||||    
T  4875501 gtgcatttgtttcaagtttgtcaaatttattcttaggaataatattctttggaatataaagatgtgaattttattccaa 4875579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 250
Target Start/End: Original strand, 41750276 - 41750427
Alignment:
Q  96 aaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtttggttaactttataatat 195  Q
    |||||||||  ||||||||| ||| |||||||||||||||||| ||||||||| ||||  ||    ||        ||||||||||||||||||||||||    
T  41750276 aaatttattcctaggaataacattccttgaaatataaagatgggaattttatttcaaggaat----ttaggaaaaatatgtttggttaactttataatat 41750371  T
Q  196 tcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    || ||  |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  41750372 tcctaagaaccataaaaatagggattataataggtaaactatttatgaatttattc 41750427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 208
Target Start/End: Complemental strand, 3254434 - 3254308
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||||||||||| ||||||||||||||||||||| |||  ||| |||||||| |||  |||||||||| |||     |||||        ||||||    
T  3254434 gtttgttttaagtttaccaaatttatttttaggaataacattctttggaatataaaaatgagaattttattctaag----gtatttagaaaaaatatgtt 3254339  T
Q  178 tggttaactttataatattcttagaaaccat 208  Q
    |||||||||| ||||||||| ||||||||||    
T  3254338 tggttaacttcataatattcctagaaaccat 3254308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 37533672 - 37533757
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||| |||||||| |||||||  |||||||||| ||||||||| ||| |||| |||| |||||||| ||||||||||||||    
T  37533672 cttagggtgtgtttgtttcaagtttactaaatttatttctaggaataacattccttggaataaaaagatgggaattttattccaag 37533757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 41298255 - 41298186
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttatt 148  Q
    |||||||||||| |||||||||||||||||||||||| |||  ||| ||||||||||||  |||||||||    
T  41298255 tttgttttaagtatatcaaatttatttttaggaataacattcattggaatataaagatgagaattttatt 41298186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 152
Target Start/End: Original strand, 45212662 - 45212735
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaa 152  Q
    |||||||||| |||||||||||||||||||||||| | |||  ||||||| ||||||||  |||||||||||||    
T  45212662 tttgttttaaatttatcaaatttatttttaggaattacattctttgaaatgtaaagatgagaattttattccaa 45212735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 23943887 - 23944061
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| |||||||||  || | |   ||||        |    
T  23943887 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattgtaa-aga---atttagaaaaaat 23943982  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| || ||||| |||||||| |  |||||||||||||||||    
T  23943983 atgtttggttacctttataatattcctaggaaccataaaaataaagattataataggtaaattatttatgaatttattc 23944061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 25444932 - 25444999
Alignment:
Q  81 tgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttatt 148  Q
    |||||||||||| ||||||||||||| |||||||| |||| ||| ||||||||||||  |||||||||    
T  25444932 tgttttaagtttgtcaaatttattttaaggaataacattttttggaatataaagatgataattttatt 25444999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 133
Target Start/End: Original strand, 25625054 - 25625109
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaa 133  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||| | |||||||    
T  25625054 gtttgttttaaatttatcaaatttatttttaggaataacatttcttaacatataaa 25625109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 45693918 - 45693993
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||||| ||||||| |||||||||| |||||||||| ||| |||| || |||||||||  ||||||||||||||    
T  45693918 gtttgtttcaagtttaccaaatttattcttaggaataacattccttggaacataaagatgagaattttattccaag 45693993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 11763733 - 11763667
Alignment:
Q  87 aagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    ||||||| |||||||||| |||||||||| ||| |||| ||||||||||||  ||||||||||||||    
T  11763733 aagtttaccaaatttattcttaggaataacattccttggaatataaagatgagaattttattccaag 11763667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 150
Target Start/End: Original strand, 39819413 - 39819491
Alignment:
Q  72 aggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattcc 150  Q
    ||||| |||||||| || |||| ||||||||||  ||||||||| |||  ||| |||||||||||||||||||||||||    
T  39819413 aggtgtgtttgtttcaaatttaccaaatttattcataggaataacattctttggaatataaagatggaaattttattcc 39819491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 157
Target Start/End: Complemental strand, 18714003 - 18713919
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatat 157  Q
    |||| ||||| || ||| ||| ||||||||||| ||||||||| ||| |||| ||||||||||||  ||| ||||||||||||||    
T  18714003 ggtgtgtttgattcaagcttaccaaatttatttataggaataacattccttggaatataaagatgagaatattattccaagatat 18713919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 14832540 - 14832619
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatat 157  Q
    |||||||| ||||||| |||||||||||  | |||||| ||| ||| |||||||||||||  ||||||||||| ||||||    
T  14832540 gtttgtttcaagtttaccaaatttatttccaagaataacattccttaaaatataaagatgataattttattcctagatat 14832619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 34356951 - 34356872
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaatagg-tatctatttatgaatttattc 250  Q
    |||||||||||| ||||||||||||| ||| |||||| ||| |||||||| |||||||  |  |||||||||||||||||    
T  34356951 tatgtttggttagctttataatattcctaggaaccataaaaatagagattataataggaaaattatttatgaatttattc 34356872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 1988131 - 1988209
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    |||||||||||||||||||||||||| | | |||||  ||| ||| |||| ||||||||| |||| || ||||||||||    
T  1988131 tatgtttggttaactttataatattccttggaaccaaaaaaatagggattataataggtaactatataagaatttattc 1988209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 14253255 - 14253325
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttatt 148  Q
    ||||||||||| |||| ||||||||||||||||||||| |||  ||| ||||||| ||||  |||||||||    
T  14253255 gtttgttttaaatttaccaaatttatttttaggaataacattctttggaatataaggatgagaattttatt 14253325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 1623206 - 1623281
Alignment:
Q  175 gtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    ||||| ||||||||||| ||||| ||| |||||| ||| |||||||| |||| |||| |||  |||||||||||||    
T  1623206 gtttgattaactttatattattcgtaggaaccataaaaatagagattataattggtaactacatatgaatttattc 1623281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 13539399 - 13539469
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    ||||||| ||||||| ||||||||||||| |  |||| |||||||| || |||||||||  ||||||||||    
T  13539399 tttgtttcaagtttaccaaatttatttttggtgataacatttcttggaacataaagatgagaattttattc 13539469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 115
Target Start/End: Complemental strand, 36590915 - 36590878
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataa 115  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  36590915 gtttgttttaagtttactaaatttatttttaggaataa 36590878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 7e-33; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 71 - 250
Target Start/End: Complemental strand, 1597691 - 1597515
Alignment:
Q  71 aaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnn 170  Q
    |||||| |||||||| ||||||| ||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||      ||||           
T  1597691 aaggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttgaaatataaagatgggaattttattccaag----gaatttaggaaaa 1597596  T
Q  171 ntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
     |||||||||||||||||||||||||||||| |||||| ||| ||  |||| |||||||| | ||||||||||||||||||    
T  1597595 atatgtttggttaactttataatattcttaggaaccataaaaatatggattataataggtaaactatttatgaatttattc 1597515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 72 - 250
Target Start/End: Complemental strand, 32202661 - 32202486
Alignment:
Q  72 aggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnn 171  Q
    ||||| |||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||||  ||||||||||||||    | ||||            
T  32202661 aggtgtgtttgtttcaagtttatcaaatttatttttaggaataacattccttggaatataaagatgagaattttattccaag----aaatttaggaaaaa 32202566  T
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  32202565 tatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 32202486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 80 - 250
Target Start/End: Complemental strand, 4683713 - 4683546
Alignment:
Q  80 ttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtttg 179  Q
    |||||| ||||||||||||||||||| || |||||| |||| ||| ||||||||||||| ||||||||||||||      ||||        ||||||||    
T  4683713 ttgtttcaagtttatcaaatttatttctaagaataacattttttggaatataaagatgggaattttattccaag----gaatttaggaaaaatatgtttg 4683618  T
Q  180 gttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||| ||||||||||||||||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  4683617 gttagctttataatattcttaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 4683546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 250
Target Start/End: Original strand, 35187195 - 35187355
Alignment:
Q  87 aagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtttggttaact 186  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| || | |   ||||        ||||||||||||  |    
T  35187195 aagtttaccaaatttattcttaggaataatatttcttgaaatataaagatggaaattttattctaa-aga---atttaggaaatatatgtttggttagtt 35187290  T
Q  187 ttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| |||||||||| ||| ||| |||| |||||||| | ||||||||||| ||||||    
T  35187291 ttataatattcctagaaaccataaaaatagggattataataggtaaactatttatgaacttattc 35187355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 78 - 250
Target Start/End: Complemental strand, 48916364 - 48916195
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| |||||||||||||||||| |||||||||| ||| |||  ||||||||||||  |||||||||||||| |||   ||         ||||||    
T  48916364 gtttgtttcaagtttatcaaatttattcttaggaataacattccttagaatataaagatgagaattttattccaaggtat---ttagaaaaaaatatgtt 48916268  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    |||||||||||||||||||| |||||||||| ||| ||| |||| ||||||| | |||  |||||||||||||    
T  48916267 tggttaactttataatattcctagaaaccataaaaatagggattataataggcaactacatatgaatttattc 48916195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 14788448 - 14788622
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||||||||||| |||||||||| |||||||||| ||| |||| ||||||||||||| ||||||||| ||||      ||||        |    
T  14788448 ggtgtgtttgttttaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttatttcaag----gaatttaggcaaaat 14788543  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  14788544 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 14788622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 25789488 - 25789662
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||| ||||||||| ||| |||| ||||||||||||  ||||||||||||||      ||||        |    
T  25789488 ggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattccttggaatataaagatgagaattttattccaag----gaatttaggaaaaat 25789583  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  25789584 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 25789662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 8331739 - 8331913
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||| | |   ||||        |    
T  8331739 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaa-aga---atttaggaaaaat 8331834  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  8331835 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 8331913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 37436966 - 37436793
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| |||||||||| ||| |||||| ||| |||| |||||||| |||||||||||||| |||| | |    ||        |    
T  37436966 ggtgtgtttgtttcaagtttaccaaatttattcttaagaataacattccttggaatataaatatggaaattttatttcaaggtgt----ttaggaaaaat 37436871  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    ||||||||||||||||||||||||||||| |||||| ||| ||  |||| |||||| || ||||||||||||||||||    
T  37436870 atgtttggttaactttataatattcttaggaaccataaaaataaggattataatagataactatttatgaatttattc 37436793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 250
Target Start/End: Original strand, 48462263 - 48462429
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgttt 178  Q
    |||||||||||||||||||||||||||||| |||||| |||  ||| | ||||||||||  |||| ||||||||     ||||||        |||||||    
T  48462263 tttgttttaagtttatcaaatttatttttatgaataacattctttggagtataaagatgagaattatattccaa-----atatttagaaaaaatatgttt 48462357  T
Q  179 ggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    ||||||||||||||||||  ||| |||||| ||| ||  |||| ||||||||| ||||||||||||||||||    
T  48462358 ggttaactttataatatttgtaggaaccataaaaataaggattataataggtaactatttatgaatttattc 48462429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 29091397 - 29091570
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| |||||||||| |||||||||| ||| ||| |||||||||||||| |||||||||||||| ||| |||          |    
T  29091397 ggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttaaaatataaagatgggaattttattccaaggtatttat----aaaaaat 29091492  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    ||||||||||||||||||||||||  ||| |||||| ||| ||| | || ||||||||| |||| | | |||||||||    
T  29091493 atgtttggttaactttataatattactaggaaccataaaaatagggtttataataggtaactatgtgtaaatttattc 29091570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 20260433 - 20260259
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||    | ||||        |    
T  20260433 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag----aaatttaggaaaaat 20260338  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||| ||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  20260337 atgtttgcttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 20260259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 249
Target Start/End: Complemental strand, 5806623 - 5806450
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |    
T  5806623 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaat 5806528  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttatt 249  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | |||||||||||||||||    
T  5806527 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttatt 5806450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 250
Target Start/End: Complemental strand, 9832212 - 9832043
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||||||||||||||  ||||||||| ||| || | ||||||||||||| ||||||||||||||      ||||        ||||||    
T  9832212 gtttgtttcaagtttatcaaatttattcctaggaataacattcctcggaatataaagatgggaattttattccaag----gaatttaagaaaaatatgtt 9832117  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  9832116 tggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 9832043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 6911210 - 6911384
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  || |||          |    
T  6911210 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaatttat----gaaaaat 6911305  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| |||| |||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  6911306 atgtttggttagctttttaatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 6911384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 67 - 250
Target Start/End: Original strand, 47031578 - 47031758
Alignment:
Q  67 acttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnn 166  Q
    ||||| |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||      ||||       
T  47031578 acttagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaag----gaatttagg 47031673  T
Q  167 nnnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
         |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  47031674 aaaaatatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 47031758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 76 - 250
Target Start/End: Original strand, 13653579 - 13653750
Alignment:
Q  76 gcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatg-gaaattttattccaagatatatatttnnnnnnnntat 174  Q
    |||||||||| ||||||| ||||||||||  ||||||||| ||| |||| |||||||||||| ||| ||||||| |||| |||    ||        |||    
T  13653579 gcgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaatttttatttcaaggtat----ttggaaaaaatat 13653674  T
Q  175 gtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    ||||||||||||||||||||||| ||| |||||| ||| ||| |||| ||||||||| |||  |||||||||||||    
T  13653675 gtttggttaactttataatattcctaggaaccataaaattagggattataataggtaactacatatgaatttattc 13653750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 9115562 - 9115736
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||      ||||        |    
T  9115562 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaag----gaatttaggaaaaat 9115657  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  9115658 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 9115736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 39930182 - 39930356
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| |||  ||| ||||||||||||| ||||||||||||||      ||||        |    
T  39930182 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattctttggaatataaagatgggaattttattccaag----gaatttaagaaaaat 39930277  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  39930278 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 39930356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 52630498 - 52630672
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||| ||||||||| ||| |||| ||||||||||||  ||||||||||||||      ||||        |    
T  52630498 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgagaattttattccaag----gaatttaggaaaaat 52630593  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| |||  ||| |||||||| | ||||||||||||||||||    
T  52630594 atgtttggttagctttataatattcctaggaaccataaaaataggaattataataggtaaactatttatgaatttattc 52630672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 65 - 250
Target Start/End: Complemental strand, 5518858 - 5518677
Alignment:
Q  65 gaacttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttn 164  Q
    ||||||| |||  |||||||| ||||||| ||||||||||  | ||||||| ||| |||| ||||||||||||| ||||||||||||||     |||||     
T  5518858 gaacttagggtctgtttgtttgaagtttaccaaatttattcattggaataacattccttggaatataaagatgggaattttattccaag----gtattta 5518763  T
Q  165 nnnnnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
           |||||| |||||||||||||| |||| ||| |||||| ||| ||| |||| ||||||||| |||| ||| |||||||||    
T  5518762 ggaaaaatatgttcggttaactttataacattcctaggaaccataaaaatagggattataataggtaactatatataaatttattc 5518677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 145
Target Start/End: Complemental strand, 9011509 - 9011437
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaatttt 145  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| || | || ||||||||| |||||||    
T  9011509 ggtgtgtttgttttaagtttatcaaatttatttttaggaataatattcctcggaacataaagatgaaaatttt 9011437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 38965026 - 38964946
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||||||||||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||    
T  38965026 ggtgtgtttgttttaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag 38964946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 157
Target Start/End: Original strand, 47677369 - 47677453
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatat 157  Q
    |||| |||| ||| |||||||| ||||||||| |||||||||| |||||||| ||||||||||||  ||||||||||||||||||    
T  47677369 ggtgtgtttatttaaagtttatgaaatttattcttaggaataaaatttcttggaatataaagatgagaattttattccaagatat 47677453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 1007591 - 1007669
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    |||||||| ||||||||||||||||||||| |||||| ||| ||  |||| ||||||||| ||||||||||||||||||    
T  1007591 tatgtttgattaactttataatattcttaggaaccataaaaatatggattataataggtaactatttatgaatttattc 1007669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 250
Target Start/End: Original strand, 46666428 - 46666607
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  |||||||||| |||  ||    ||        
T  46666428 cttagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattctaaggaat----ttagga 46666523  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
        |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  46666524 aaaatatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 46666607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 12190524 - 12190350
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||  || |||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |    
T  12190524 ggtgtgtttgtttcaagtttatcaaatttattcctaagaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaat 12190429  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaatagg-tatctatttatgaatttattc 250  Q
    ||||||||||| |||||||||||||  || |||||| ||| ||| |||| |||||||  | ||||||||||||||||||    
T  12190428 atgtttggttagctttataatattccaaggaaccataaaaatagggattataataggaaaactatttatgaatttattc 12190350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 32824646 - 32824820
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| || ||||  |||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||  ||    ||        |    
T  32824646 ggtgtgtttgtttcaaatttacgaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaaggaat----ttaagaaaaat 32824741  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  32824742 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 32824820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 52186338 - 52186265
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaa 152  Q
    ||||||||||||||| |||||||||||| |||||||| ||| |||| ||||||||||||  |||||||||||||    
T  52186338 tttgttttaagtttaccaaatttattttaaggaataacattccttggaatataaagatgagaattttattccaa 52186265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 73 - 157
Target Start/End: Complemental strand, 19923810 - 19923726
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatat 157  Q
    |||| |||||||||||||| ||||||||||||||||| ||||| |||||||  || |||||||||  |||||||||| |||||||    
T  19923810 ggtgtgtttgttttaagttcatcaaatttatttttagaaataacatttcttagaacataaagatgagaattttattctaagatat 19923726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 67 - 247
Target Start/End: Original strand, 36361502 - 36361679
Alignment:
Q  67 acttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnn 166  Q
    ||||| |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| |||||||| |||| ||||||||||||||      ||||       
T  36361502 acttagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaaaatgggaattttattccaag----gaatttagg 36361597  T
Q  167 nnnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaattta 247  Q
         |||||||||||| ||||||||||||| ||  |||||| ||| ||| |||| |||||||| | |||||||||||||||    
T  36361598 aaaaatatgtttggttagctttataatattcctatgaaccataaaaatagggattataataggtaaactatttatgaattta 36361679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 78 - 250
Target Start/End: Complemental strand, 51445421 - 51445252
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  ||||||||| ||| |||| |||||| |||||  ||||||||||||||  ||    ||        ||||||    
T  51445421 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatatatagatgagaattttattccaaggaat----ttaggaaaaatatgtt 51445326  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  51445325 tggttacctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 51445252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 13932214 - 13932139
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||||| |||||||||||||||||||  |||||||| |||  |||||||||||||||||||| |||||| ||||    
T  13932214 gtttgtttcaagtttatcaaatttatttcaaggaataacattcattgaaatataaagatggaaactttatttcaag 13932139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 25473980 - 25474059
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaa 152  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||||||||||  |||||||||||||    
T  25473980 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaa 25474059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 49627304 - 49627374
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttatt 148  Q
    |||||||| || |||| |||||||||||||| |||||| |||||||| ||||||||||||| |||||||||    
T  49627304 gtttgtttcaaatttaccaaatttatttttaagaataacatttcttggaatataaagatgggaattttatt 49627374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 2632673 - 2632752
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||||||||||||||||||||  ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  2632673 tatgtttggttaactttataatatttctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 2632752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 3572817 - 3572738
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  3572817 tatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 3572738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 6978590 - 6978669
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  6978590 tatgtttggttagctttataatattcctaggaaccataaaattagggattataataggtaaactatttatgaatttattc 6978669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 24116681 - 24116594
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatata 160  Q
    |||| |||||||||||||||| |||||||||| ||| |||||| ||| |||  ||||||||||||  ||||||||| |||| ||||||    
T  24116681 ggtgtgtttgttttaagtttaacaaatttattcttaagaataacattccttagaatataaagatgagaattttatttcaaggtatata 24116594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 149
Target Start/End: Complemental strand, 31807089 - 31807018
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||| ||| ||||| ||||||||||||| || ||||||||||||||| || ||||||||| |||||||||||    
T  31807089 gtttatttcaagttgatcaaatttatttctaagaataatatttcttggaacataaagatgaaaattttattc 31807018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 39329428 - 39329507
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  39329428 tatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 39329507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 1228221 - 1228147
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaa 152  Q
    |||||||||||||||| ||||||||||| || ||||||  || |||| ||||||||||||  |||||||||||||    
T  1228221 gtttgttttaagtttaccaaatttatttctatgaataaccttccttggaatataaagatgagaattttattccaa 1228147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 45813727 - 45813666
Alignment:
Q  87 aagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttatt 148  Q
    |||||||||||||||||| |||||||||| |||  ||||||||||||||||  |||||||||    
T  45813727 aagtttatcaaatttattcttaggaataacattcattgaaatataaagatgtgaattttatt 45813666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 3939226 - 3939286
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaa 133  Q
    |||| |||||||||||||||||||||| ||||||||||||||| |||  ||| ||||||||    
T  3939226 ggtgtgtttgttttaagtttatcaaatatatttttaggaataacattctttggaatataaa 3939286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 157
Target Start/End: Original strand, 46960353 - 46960437
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatat 157  Q
    |||| |||||||| || |||||||||||||||  ||||||||| |||  ||| ||||||||||||  || |||||||||||||||    
T  46960353 ggtgtgtttgtttcaaatttatcaaatttattcctaggaataacattctttggaatataaagatgagaaatttattccaagatat 46960437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 2430227 - 2430302
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||||| |||||||  |||||||||  |||||||||  || |||| ||||||||||||| ||||||||||||||    
T  2430227 gtttgtttcaagtttactaaatttattcctaggaataacgttccttggaatataaagatgggaattttattccaag 2430302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 30240831 - 30240890
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggta 231  Q
    |||||||||||||||||||||||||| ||  |||||| ||||||| |||| |||||||||    
T  30240831 tatgtttggttaactttataatattcctaagaaccataaaagtagggattataataggta 30240890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 47845473 - 47845422
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaata 129  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||| ||||    
T  47845473 gtttgttttaactttatcaaatttatttttagcaataacatttcttggaata 47845422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 52699798 - 52699732
Alignment:
Q  87 aagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||    
T  52699798 aagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaag 52699732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 115
Target Start/End: Complemental strand, 11014879 - 11014842
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataa 115  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  11014879 gtttgttttaaatttatcaaatttatttttaggaataa 11014842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 37336694 - 37336617
Alignment:
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    ||||||||||||| || ||||||| | ||||||||| ||| |||||||| |||||||||  |||  ||||||||||||    
T  37336694 atgtttggttaacattttaatattttaagaaaccataaaaatagagattataataggtaattatacatgaatttattc 37336617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 151
Target Start/End: Original strand, 2632584 - 2632656
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattcca 151  Q
    ||||||| |||||||  |||||||||| ||||||||| ||| |||  |||||||| |||| ||||||||||||    
T  2632584 tttgtttcaagtttactaaatttatttctaggaataacattccttagaatataaatatgggaattttattcca 2632656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 231
Target Start/End: Complemental strand, 38519402 - 38519253
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| || |||| ||||||||||  ||||||||| |||| ||| || ||||| ||| ||||||||||||||    | |||||         |||||    
T  38519402 gtttgtttcaaatttaccaaatttattcgtaggaataacattttttggaacataaaaatgaaaattttattccaa----tgtatttagaaaaaagatgtt 38519307  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggta 231  Q
    || ||||| ||||||||||||| |||||||| ||| ||| |||| |||||||||    
T  38519306 tgtttaacattataatattcttggaaaccataaaaatagggattataataggta 38519253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 37261549 - 37261620
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||||||| |||||||||||||||||||||| || ||| |||  ||| |||||||| |||  ||||||||||    
T  37261549 gtttgtttcaagtttatcaaatttatttttatgattaacattcattggaatataaatatgtgaattttattc 37261620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 50191016 - 50190937
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||| ||| ||||||||||||| ||| || ||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  50191016 tatgtttgattagctttataatattcctaggaatcataaaaatagggattataataggtaaactatttatgaatttattc 50190937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 148
Target Start/End: Complemental strand, 50191111 - 50191036
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttatt 148  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||  ||||||||||||  |||||||||    
T  50191111 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttagaatataaagatgagaattttatt 50191036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 49823148 - 49823070
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttatt 249  Q
    ||||||||||||  |||||||||||| ||| |||||| ||| ||| |||| |||||||| |  ||||||||||||||||    
T  49823148 tatgtttggttaggtttataatattcctaggaaccataaaaatagggattataataggtaaattatttatgaatttatt 49823070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 17475656 - 17475576
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| ||| |||| ||||||||||||||||||  || |||||| |||   || || ||||| |||||||||||||||||||    
T  17475656 ggtgtgttcgtttcaagtttatcaaatttattcctaagaataacattctatggaaaataaaaatggaaattttattccaag 17475576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 250
Target Start/End: Complemental strand, 52186262 - 52186202
Alignment:
Q  190 taatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    ||||||||||||||||||| ||| |||| ||| ||||||||| |||| ||  |||||||||    
T  52186262 taatattcttagaaaccataaaaatagaaattataataggtaactatgtagaaatttattc 52186202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 250
Target Start/End: Original strand, 40435627 - 40435802
Alignment:
Q  72 aggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnn 171  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||            
T  40435627 aggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaa 40435722  T
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||||||||||||||||||||| ||| |||||| ||| |||||||| |||||||| | ||||||||||||||||||    
T  40435723 tatgtttggttaactttataatattcctaggaaccataaaaatagagattataataggtaaactatttatgaatttattc 40435802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 39730640 - 39730466
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||  ||    ||        |    
T  39730640 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgagaattttattccaaggaat----ttaggaaaaat 39730545  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||||||||||||||||| ||| |||||||||| ||| |||| |||||||| | ||||||||||||||||||    
T  39730544 atgtttggttaactttataatattcctaggaaccatgaaaatagggattataataggtaaactatttatgaatttattc 39730466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 31938216 - 31938043
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||| |||||||| |||||||||||||||     |||||        |    
T  31938216 ggtgtgtttgtttcaagtttatcaaatttattcataggaataacattccttggaatttaaagatgaaaattttattccaag----gtatttaggaaaaat 31938121  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    ||||||||||||||||||||||||| ||| |||||| ||| ||  |||| ||||||||| || |||||||||||||||    
T  31938120 atgtttggttaactttataatattcctaggaaccataaaaataaggattataataggtaactgtttatgaatttattc 31938043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 25932169 - 25932343
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||  ||||||||||  ||||||||| ||| |||||||||||||||||| ||||||||||||||      ||||        |    
T  25932169 ggtgtgtttgtttcaagtttcccaaatttattcctaggaataacattccttgaaatataaagatgggaattttattccaag----gaatttaggaaaaat 25932264  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||||||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  25932265 atgtttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 25932343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 45595996 - 45596170
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| |||||||||| |||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |    
T  45595996 ggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaat 45596091  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  45596092 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 45596170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 55968347 - 55968173
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |    
T  55968347 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttagaaaaaat 55968252  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||||||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  55968251 atgtttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 55968173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 43722992 - 43723166
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||| ||||||||| ||| |||| ||||||||||||| ||||||||||||| | |   ||||        |    
T  43722992 ggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaa-aga---atttaggaaaaat 43723087  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  43723088 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 43723166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 18405580 - 18405406
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc-caagatatatatttnnnnnnnn 171  Q
    |||| |||||||| ||||||| |||||||||| |||||||||| ||| |||| |||||||||||||||||||||||| || ||     ||||            
T  18405580 ggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaagatggaaattttattctcagga-----atttaggaaaaa 18405486  T
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  18405485 tatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 18405406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 18931486 - 18931561
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    ||||||||||||||||||||||||||| |||||||||| ||| |||| ||||||||||| ||||||||||||||||    
T  18931486 gtttgttttaagtttatcaaatttattcttaggaataacattccttggaatataaagatagaaattttattccaag 18931561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 153
Target Start/End: Original strand, 23686508 - 23686595
Alignment:
Q  66 aacttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||| |||| |||||||| ||||||| |||||||||| |||||||||| ||| |||||||||||||||||| ||||||||||||||    
T  23686508 aacttagggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttgaaatataaagatgggaattttattccaag 23686595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 13230336 - 13230162
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |    
T  13230336 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaat 13230241  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  13230240 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 13230162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 27763246 - 27763072
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||||||||| | ||||||||||||||      ||||        |    
T  27763246 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagataggaattttattccaag----gaatttaggaaaaat 27763151  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  27763150 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 27763072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 39835654 - 39835480
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||| || |||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |    
T  39835654 ggtgtgtttgtttcaagtttaccaaatttatttctatgaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaat 39835559  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||||||||||||||||| |||||| ||| ||| ||  |||| |||||||| | ||||||||||||||||||    
T  39835558 atgtttggttaactttataatattcctagaaatcataaaaataaggattataataggtaaactatttatgaatttattc 39835480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 250
Target Start/End: Original strand, 35999419 - 35999588
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| |||||||||| ||| |||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        ||||||    
T  35999419 gtttgtttcaagtttaccaaatttattcttaagaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaatatgtt 35999514  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  35999515 tggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 35999588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 45748142 - 45747969
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |    
T  45748142 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttagaaaaaat 45748047  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| |||||||| |||| |  | ||||||||||||||||||    
T  45748046 atgtttggttagctttataatattcctaggaaccataaaaatagagattataatggtaaactatttatgaatttattc 45747969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 79 - 250
Target Start/End: Complemental strand, 50673245 - 50673078
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgttt 178  Q
    ||||||| ||||||||||||||||||  ||||||||| ||| |||||||||||||||||  ||||||||||||||      ||||        |||||||    
T  50673245 tttgtttcaagtttatcaaatttattcctaggaataacattccttgaaatataaagatgagaattttattccaag----gaatttaggaaaaatatgttt 50673150  T
Q  179 ggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  50673149 ggttagctttataatattcctaggaaccat-aaaatagggattataataggtaaactatttatgaatttattc 50673078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 67 - 250
Target Start/End: Original strand, 48873743 - 48873923
Alignment:
Q  67 acttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnn 166  Q
    ||||| |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||| ||||||||||  || ||          
T  48873743 acttagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaatattattccaaggaatgta----gg 48873838  T
Q  167 nnnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
         |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  48873839 aaaaatatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 48873923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 67 - 250
Target Start/End: Original strand, 48879047 - 48879227
Alignment:
Q  67 acttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnn 166  Q
    ||||| |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||| ||||||||||  || ||          
T  48879047 acttagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaatattattccaaggaatgta----gg 48879142  T
Q  167 nnnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
         |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  48879143 aaaaatatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 48879227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 47670090 - 47670264
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |    
T  47670090 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaat 47670185  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    || |||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  47670186 atatttggttatctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 47670264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 935854 - 936028
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| |||||||||| ||| |||||| |||||||| ||||||||||| | ||||||||||||| | |   ||||        |    
T  935854 ggtgtgtttgtttcaagtttaccaaatttattcttaagaataacatttcttggaatataaagataggaattttattccaa-aga---atttaggaaaaat 935949  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| ||| || ||| ||| |||| |||||||| | ||||||||||||||||||    
T  935950 atgtttggttagctttataatattcctaggaactataaaaatagggattataataggtaaactatttatgaatttattc 936028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 250
Target Start/End: Complemental strand, 41744571 - 41744394
Alignment:
Q  70 taaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnn 169  Q
    ||||||| |||||||| ||||||| ||||||||||| ||||||||| |||  ||| ||||||||||||  ||||||||||||||      ||||          
T  41744571 taaggtgtgtttgtttcaagtttaccaaatttatttctaggaataacattcattggaatataaagatgagaattttattccaag----gaatttaggaaa 41744476  T
Q  170 nntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
      |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||| ||||||||||||||    
T  41744475 aatatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactaattatgaatttattc 41744394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 6280268 - 6280094
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| |||||||| || | ||||||||||||||  || |||          |    
T  6280268 ggtgtgtttgtttcaagtttaccaaatttattcataggaataacattccttggaatataaaaataggaattttattccaaggaatttat----gaaaaat 6280173  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    || |||||||||||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  6280172 atatttggttaactttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 6280094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 250
Target Start/End: Original strand, 8321968 - 8322147
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||| ||||||||||||||||||||| |||  ||| ||||||||||||  ||||||||| ||||      ||||        
T  8321968 cttagggtgtgtttgtttcaagtttaccaaatttatttttaggaataacattctttggaatataaagatgagaattttattacaag----gaatttagga 8322063  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
        |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| |  |||||||||||||||||    
T  8322064 aaaatatgtttggttagctttataatattcataggaaccataaaaatagggattataataggtaaattatttatgaatttattc 8322147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 41859393 - 41859219
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||| ||||  ||    ||        |    
T  41859393 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaattttatttcaaggaat----ttaggaaaaat 41859298  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  41859297 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 41859219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 7258692 - 7258772
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||||||| |||||||||||||||||| | |||||||| ||| |||| |||||||| |||| ||||||||||||||    
T  7258692 ggtgtgtttgtttcaagtttatcaaatttattctcaggaataacattccttggaatataaatatgggaattttattccaag 7258772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 78 - 250
Target Start/End: Original strand, 42773681 - 42773850
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  ||| ||||| ||| |||| | ||||||||||| ||||||||||||||  ||    ||        ||||||    
T  42773681 gtttgtttcaagtttaccaaatttattcctagaaataacattccttggagtataaagatgggaattttattccaaggaat----ttaggaaaaatatgtt 42773776  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  42773777 tggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 42773850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 78 - 250
Target Start/End: Complemental strand, 48519233 - 48519064
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||      ||||        ||||||    
T  48519233 gtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgtgaattttattccaag----gaatttaggaaaaatatgtt 48519138  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||| ||||||||||||| ||| |||||| ||| |||  ||| |||||||| | ||||||||||||||||||    
T  48519137 tggttagctttataatattcctaggaaccataaaaataggtattataataggtaaactatttatgaatttattc 48519064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 32953256 - 32953331
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||||| ||||||||| ||||||||| ||| |||||||||  ||| ||||||||||||| ||||||||||||||    
T  32953256 gtttgtttcaagtttatctaatttatttctagaaataatattcattggaatataaagatgggaattttattccaag 32953331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 79 - 250
Target Start/End: Complemental strand, 34238295 - 34238127
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgttt 178  Q
    ||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||||||||||  ||||||||||||||      ||||        |||||||    
T  34238295 tttgtttcaagtttatcaaatttattcataggaataacattccttggaatataaagatgagaattttattccaag----gaatttaagaaaaatatgttt 34238200  T
Q  179 ggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||| ||||||||||||| ||| ||| |  ||| ||| |||| |||||||| | ||||||||||||||||||    
T  34238199 ggttagctttataatattcctaggaacaaaaaaaatagggattataataggtaaactatttatgaatttattc 34238127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 14796296 - 14796366
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttatt 148  Q
    |||| |||||||||| ||||||||||||||||||||||||||| ||  ||||||||||||  |||||||||    
T  14796296 gtttattttaagtttgtcaaatttatttttaggaataatattttttagaatataaagatgtgaattttatt 14796366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 18405131 - 18405196
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatgg 138  Q
    |||| |||||||||||||||  |||||||||| |||||||||| ||| ||||||||||||||||||    
T  18405131 ggtgtgtttgttttaagtttgccaaatttattcttaggaataacattccttgaaatataaagatgg 18405196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 27555155 - 27555235
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||||||| |||||||  |||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||    
T  27555155 ggtgtgtttgtttcaagtttactaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag 27555235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 38414032 - 38414108
Alignment:
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttatt 249  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||  ||| ||||||||| |||  ||||||||||||    
T  38414032 atgtttgggtaactttataatattcttagaaaccataaaaataggaattataataggtaactacatatgaatttatt 38414108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 52469430 - 52469510
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttc-ttgaaatataaagatggaaattttattccaagatat 157  Q
    |||||||||||||| |||||||||||| |||||||||| ||| | ||| ||||||||||| |||||||||| |||| ||||    
T  52469430 gtttgttttaagttaatcaaatttattcttaggaataacattcctttggaatataaagattgaaattttataccaaaatat 52469510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 160
Target Start/End: Complemental strand, 10401122 - 10401040
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatata 160  Q
    |||||||||||||||| ||||||||||| | | ||||| |||  ||||| |||||| |||  |||||||||||||||||||||    
T  10401122 gtttgttttaagtttaccaaatttatttctggaaataacattctttgaagtataaaaatgagaattttattccaagatatata 10401040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 36860103 - 36860027
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| || ||||| |||||||||||||||    
T  36860103 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaacataaaaatggaaattttattc 36860027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 25916285 - 25916206
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||| ||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  25916285 tatgtttgattagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 25916206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 38413909 - 38413984
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||||| ||||||| |||||||| |||||| ||||| ||| |||| ||||||||||||  ||||| ||||||||    
T  38413909 gtttgtttcaagtttaccaaatttaattttagaaataacattccttggaatataaagatgagaatttaattccaag 38413984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 250
Target Start/End: Original strand, 39498652 - 39498727
Alignment:
Q  176 tttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  39498652 tttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 39498727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 250
Target Start/End: Original strand, 39501991 - 39502066
Alignment:
Q  176 tttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  39501991 tttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 39502066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 37014724 - 37014646
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatat 157  Q
    ||||||| |||||||  |||||||||  || ||||||||||| ||| ||||||||||||  |||||||||| |||||||    
T  37014724 tttgtttcaagtttacaaaatttattcctaagaataatattttttggaatataaagatgcgaattttattcgaagatat 37014646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 27942560 - 27942639
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||||||||| ||||||||||||| ||| |||||| ||| ||  |||| |||||||| |  |||||||||||||||||    
T  27942560 tatgtttggttagctttataatattcctaggaaccataaaaataaggattataataggtaaattatttatgaatttattc 27942639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 152
Target Start/End: Original strand, 30790276 - 30790354
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaa 152  Q
    |||| |||||||| ||||||| ||||||||||| ||||| ||| | |||||| ||||||||||||  || ||||||||||    
T  30790276 ggtgtgtttgtttcaagtttagcaaatttatttctaggagtaaca-ttcttggaatataaagatgagaaatttattccaa 30790354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 34049849 - 34049770
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaatagg-tatctatttatgaatttattc 250  Q
    |||||||||||| |||||||||||||  || |||||| ||| ||| |||| |||||||  | ||||||||||||||||||    
T  34049849 tatgtttggttagctttataatattccaaggaaccataaaaatagggattataataggaaaactatttatgaatttattc 34049770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 12276250 - 12276173
Alignment:
Q  79 tttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatat 157  Q
    ||||||| |||||||  |||||||||| ||||||||| |||| ||||| ||||||||||  ||||||||| ||| ||||    
T  12276250 tttgtttcaagtttactaaatttatttataggaataacattttttgaa-tataaagatgtgaattttatttcaaaatat 12276173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 36858230 - 36858308
Alignment:
Q  172 tatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    ||||||||| ||||||| |||||||| ||| |||||| ||| ||  |||| ||| ||||| |||| |||||||||||||    
T  36858230 tatgtttggataactttgtaatattcctaggaaccataaaaataaggattataacaggtaactatatatgaatttattc 36858308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 249
Target Start/End: Original strand, 30415743 - 30415803
Alignment:
Q  189 ataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttatt 249  Q
    ||||||||||||| |||||| ||| ||| |||| |||||||||  |||||||||| |||||    
T  30415743 ataatattcttaggaaccataaaaatagggattataataggtaattatttatgaaattatt 30415803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 38394635 - 38394715
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||||||| ||||||| ||||||||||| || || |||||||||||  || ||||| |||  ||||||||| ||||    
T  38394635 ggtgtgtttgtttcaagtttaccaaatttatttctaagactaatatttcttagaacataaatatgagaattttatttcaag 38394715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 44309497 - 44309553
Alignment:
Q  81 tgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatg 137  Q
    ||||| |||||||  ||||||||||||| ||||||||||||||  || |||||||||    
T  44309497 tgtttgaagtttactaaatttatttttaagaataatatttcttagaacataaagatg 44309553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 52469523 - 52469599
Alignment:
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttatt 249  Q
    ||||||||||| ||||||||||||| ||  |||||| ||  |||||||| ||||||||| |||| |  |||||||||    
T  52469523 atgtttggttagctttataatattcctatgaaccataaatatagagattataataggtaactatattggaatttatt 52469599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 250
Target Start/End: Original strand, 16968644 - 16968823
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||||||| |||  ||| ||||||||||||  ||||||||||||||      ||||        
T  16968644 cttaaggtgtgtttgtttcaagtttatcaaatttatttctaggaataacattctttggaatataaagatgagaattttattccaag----gaatttagga 16968739  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
        |||||||||||| ||||||||||||||||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  16968740 aaaatatgtttggttagctttataatattcttaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 16968823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 8029027 - 8029201
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||||||||||||||||||    | ||||        |    
T  8029027 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatggaaattttattccaag----aaatttaggaaaaat 8029122  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||  ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  8029123 atgtttggttggctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 8029201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 68 - 250
Target Start/End: Complemental strand, 7053930 - 7053751
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||| |||||||||| |||||||||| ||| |||| |||||||| |||| ||||||||||||||  || |||          
T  7053930 cttagggtgtgtttgtttcaagtttaccaaatttattcttaggaataacattccttggaatataaatatgggaattttattccaaggaatttat----ga 7053835  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
        |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  7053834 aaaatatgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 7053751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 78 - 250
Target Start/End: Original strand, 14170744 - 14170913
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnntatgtt 177  Q
    |||||||| ||||||| ||||||||||| ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        ||||||    
T  14170744 gtttgtttcaagtttaccaaatttatttctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaatatgtt 14170839  T
Q  178 tggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    |||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  14170840 tggttagctttataatattcctaggaaccataaaaatagggattgtaataggtaaactatttatgaatttattc 14170913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 250
Target Start/End: Complemental strand, 10246468 - 10246289
Alignment:
Q  68 cttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnn 167  Q
    |||| |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        
T  10246468 cttagggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttagga 10246373  T
Q  168 nnnntatgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
        |||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  10246372 aaaatatgtttggttagctttataatattcctaggaaccataaaattagggattataataggtaaactatttatgaatttattc 10246289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 18897645 - 18897819
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||      ||||        |    
T  18897645 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag----gaatttaggaaaaat 18897740  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| |||  ||| |||||||| | ||||||||||||||||||    
T  18897741 atgtttggttagctttataatattcctaggaaccataaaaataggaattataataggtaaactatttatgaatttattc 18897819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 2657424 - 2657504
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||||||| ||||||||||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||||||    
T  2657424 ggtgtgtttgtttcaagtttatcaaatttattcctaggaataacattccttggaatataaagatgggaattttattccaag 2657504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 21008321 - 21008246
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||||||| |||||||| ||||||||||||| |||||| |||||||| ||||||||||||  ||||||||||||||    
T  21008321 gtttgtttcaagtttattaaatttatttttatgaataacatttcttggaatataaagatgagaattttattccaag 21008246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 1316743 - 1316917
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatatatatttnnnnnnnnt 172  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| |||  ||| ||||||||||||  ||||||||||||||  ||    ||        |    
T  1316743 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattctttggaatataaagatgagaattttattccaaggaat----ttaggaaaaat 1316838  T
Q  173 atgtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  1316839 atgtttggttagctttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 1316917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 149
Target Start/End: Complemental strand, 6706094 - 6706023
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||||||| ||||||| ||| ||||||| ||||||||| ||| |||||||||||||||||  ||||||||||    
T  6706094 gtttgtttcaagtttaccaattttatttctaggaataacattccttgaaatataaagatgagaattttattc 6706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 157
Target Start/End: Original strand, 8314622 - 8314702
Alignment:
Q  77 cgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaagatat 157  Q
    ||||||||||||||||||||||||||||  ||| | ||| ||| |||| |||||| | ||| ||||||||||| |||||||    
T  8314622 cgtttgttttaagtttatcaaatttattcctagaattaacattacttgcaatatacacatgtaaattttattctaagatat 8314702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 149
Target Start/End: Complemental strand, 7344831 - 7344765
Alignment:
Q  83 ttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    ||||||||||||||||||||||  ||||||||| ||| |||| |||||||| |||  ||||||||||    
T  7344831 ttttaagtttatcaaatttattcctaggaataacattccttggaatataaatatgagaattttattc 7344765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 7344320 - 7344256
Alignment:
Q  187 ttataatattcttagaaaccatgaaagtagagattttaataggt-atctatttatgaatttattc 250  Q
    ||||||||||| ||| |||||| ||| ||| |||| |||||||| | ||||||||||||||||||    
T  7344320 ttataatattcctaggaaccataaaaatagggattataataggtaaactatttatgaatttattc 7344256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 76 - 250
Target Start/End: Original strand, 143340 - 143511
Alignment:
Q  76 gcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatg-gaaattttattccaagatatatatttnnnnnnnntat 174  Q
    |||||||||| ||||||| ||||||||||  ||||||||| ||| |||| |||||||||||| ||| ||||||| |||| |||    ||        |||    
T  143340 gcgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgagaatttttatttcaaggtat----ttggaaaaaatat 143435  T
Q  175 gtttggttaactttataatattcttagaaaccatgaaagtagagattttaataggtatctatttatgaatttattc 250  Q
    ||||||||||||||||||||||| ||| |||||| ||| ||| |||| ||||||||| |||  |||||||||||||    
T  143436 gtttggttaactttataatattcctaggaaccataaaattagggattataataggtaactacatatgaatttattc 143511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 201650 - 201726
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||| |||||||| ||||||| ||||||||||  ||||||||| ||| |||| ||||||||||||| ||||||||||    
T  201650 ggtgtgtttgtttcaagtttaccaaatttattcctaggaataacattccttggaatataaagatgggaattttattc 201726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 23683 - 23604
Alignment:
Q  69 ttaaggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattc 149  Q
    |||||||  |||| ||||||||||| |||||||||||||| ||||||||||||||| |||||||| |||| ||||||||||    
T  23683 ttaaggtttgtttattttaagtttaccaaatttatttttaagaataatatttcttggaatataaaaatgg-aattttattc 23604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 43435 - 43365
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttatt 148  Q
    |||| |||||||||| ||||||||||||||||||||||||||| ||  ||||||||||||  |||||||||    
T  43435 gtttattttaagtttgtcaaatttatttttaggaataatattttttagaatataaagatgtgaattttatt 43365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 29294 - 29219
Alignment:
Q  78 gtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| ||||||||||||||||||||||  || |||||| |||| ||| ||||||||||| | ||||||||||||||    
T  29294 gtttattttaagtttatcaaatttattcctatgaataacattttttggaatataaagataggaattttattccaag 29219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 3912 - 3832
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||||||| ||||  | ||||||||||  || |||||| ||| |||| ||||||||||| | ||||||||||||||    
T  3912 ggtgtgtttgtttcaagtgcaccaaatttattcctatgaataacattccttggaatataaagataggaattttattccaag 3832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 4190 - 4270
Alignment:
Q  73 ggtgcgtttgttttaagtttatcaaatttatttttaggaataatatttcttgaaatataaagatggaaattttattccaag 153  Q
    |||| |||||||| ||||  | ||||||||||  || |||||| ||| |||| ||||||||||| | ||||||||||||||    
T  4190 ggtgtgtttgtttcaagtgcaccaaatttattcctatgaataacattccttggaatataaagataggaattttattccaag 4270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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