View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6236_high_20 (Length: 236)

Name: NF6236_high_20
Description: NF6236
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6236_high_20
NF6236_high_20
[»] chr4 (13 HSPs)
chr4 (1-219)||(36407128-36407346)
chr4 (1-219)||(36429283-36429501)
chr4 (1-219)||(36399671-36399889)
chr4 (1-219)||(36376238-36376456)
chr4 (1-219)||(36435736-36435954)
chr4 (1-219)||(36419290-36419508)
chr4 (48-219)||(36370513-36370684)
chr4 (62-219)||(36412312-36412469)
chr4 (1-219)||(36389482-36389701)
chr4 (1-46)||(36370446-36370491)
chr4 (84-172)||(36437727-36437815)
chr4 (130-174)||(40823841-40823885)
chr4 (129-173)||(48476691-48476735)
[»] chr8 (4 HSPs)
chr8 (49-154)||(15697353-15697458)
chr8 (90-171)||(15799843-15799924)
chr8 (91-171)||(15722546-15722626)
chr8 (90-154)||(15805392-15805456)
[»] chr2 (2 HSPs)
chr2 (65-172)||(2662470-2662577)
chr2 (128-172)||(2682025-2682069)
[»] chr3 (1 HSPs)
chr3 (129-166)||(13855176-13855213)
[»] scaffold0090 (1 HSPs)
scaffold0090 (129-166)||(8284-8321)
[»] chr1 (2 HSPs)
chr1 (129-166)||(47607375-47607412)
chr1 (132-172)||(47287663-47287703)
[»] chr7 (6 HSPs)
chr7 (130-174)||(20168090-20168134)
chr7 (130-174)||(20231557-20231601)
chr7 (130-174)||(20243622-20243666)
chr7 (130-174)||(20264016-20264060)
chr7 (130-174)||(20279525-20279569)
chr7 (130-166)||(20289266-20289302)


Alignment Details
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 36407128 - 36407346
Alignment:
Q  1 tggattgggtaaagcgttttgaaatcatttgtgggattgctcgaggtgttttatatcttcaccaagattcaaggctgaaaataattcatagagatctaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36407128 tggattgggtaaagcgttttgaaatcatttgtgggattgctcgaggtgttttatatcttcaccaagattcaaggctgaaaataattcatagagatctaaa 36407227  T
Q  101 agccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttggagaagatgaaatccaagcaagaacaaaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36407228 agccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttggagaagatgaaatccaagcaagaacaaaa 36407327  T
Q  201 agagtggtcggaacatagt 219  Q
    |||||||||||||||||||    
T  36407328 agagtggtcggaacatagt 36407346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 36429283 - 36429501
Alignment:
Q  1 tggattgggtaaagcgttttgaaatcatttgtgggattgctcgaggtgttttatatcttcaccaagattcaaggctgaaaataattcatagagatctaaa 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36429283 tggattgggtaaagcgttttgaaattatttgtgggattgctcgaggtgttttatatcttcatcaagattcaaggctgaaaataattcatagagatctaaa 36429382  T
Q  101 agccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttggagaagatgaaatccaagcaagaacaaaa 200  Q
    ||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  36429383 agccagcaacgttctcctcgatgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttggagaagatgaaattcaagcaagaacaaaa 36429482  T
Q  201 agagtggtcggaacatagt 219  Q
    |||||||||||||||||||    
T  36429483 agagtggtcggaacatagt 36429501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 36399671 - 36399889
Alignment:
Q  1 tggattgggtaaagcgttttgaaatcatttgtgggattgctcgaggtgttttatatcttcaccaagattcaaggctgaaaataattcatagagatctaaa 100  Q
    |||||||||  |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36399671 tggattggggtaagcgttttgaaattatttgtggcattgctcgaggtgttttatatcttcaccaagattcaaggctgaaaataattcatagagatctaaa 36399770  T
Q  101 agccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttggagaagatgaaatccaagcaagaacaaaa 200  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36399771 agccagcaatgttctccttgatgctgaaatgaatcccaaaatctcagatttcggtatggctagaatatttggagaagatgaaatccaagcaagaacaaaa 36399870  T
Q  201 agagtggtcggaacatagt 219  Q
    |||||||||||||||||||    
T  36399871 agagtggtcggaacatagt 36399889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 36376238 - 36376456
Alignment:
Q  1 tggattgggtaaagcgttttgaaatcatttgtgggattgctcgaggtgttttatatcttcaccaagattcaaggctgaaaataattcatagagatctaaa 100  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36376238 tggattggggaaagcgttttgaaattatttgtgggattgctcgaggtgttttatatcttcatcaagattcaaggctgaaaataattcatagagatctaaa 36376337  T
Q  101 agccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttggagaagatgaaatccaagcaagaacaaaa 200  Q
    ||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  36376338 agccagcaacgttctcctcgatgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttggagaagatgaaatacaagcaagaacaaaa 36376437  T
Q  201 agagtggtcggaacatagt 219  Q
    |||||||| ||||||||||    
T  36376438 agagtggttggaacatagt 36376456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 36435736 - 36435954
Alignment:
Q  1 tggattgggtaaagcgttttgaaatcatttgtgggattgctcgaggtgttttatatcttcaccaagattcaaggctgaaaataattcatagagatctaaa 100  Q
    |||||||||  |||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36435736 tggattggggtaagcgttttgaaattatttgtggcattgctcgaggtgttttatatcttcatcaagattcaaggctgaaaataattcatagagatctaaa 36435835  T
Q  101 agccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttggagaagatgaaatccaagcaagaacaaaa 200  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  36435836 agccagcaatgttctccttgatgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttggagaagatgaaatacaagcaagaacaaaa 36435935  T
Q  201 agagtggtcggaacatagt 219  Q
    |||||||| ||||||||||    
T  36435936 agagtggttggaacatagt 36435954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 36419290 - 36419508
Alignment:
Q  1 tggattgggtaaagcgttttgaaatcatttgtgggattgctcgaggtgttttatatcttcaccaagattcaaggctgaaaataattcatagagatctaaa 100  Q
    |||||||||| | |||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  36419290 tggattgggttacgcgttttgaaattatttgtgggattgctcgaggtgtattatatcttcatcaagattcaaggctgaaaataatccatagagatctaaa 36419389  T
Q  101 agccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttggagaagatgaaatccaagcaagaacaaaa 200  Q
    ||||||||| ||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  36419390 agccagcaacgttctccttgatgctgtaatgaatcccaaaatctcggattttggtatggctagaatatttggagaagatgaaattcaagctagaacaaaa 36419489  T
Q  201 agagtggtcggaacatagt 219  Q
    ||||| || ||||||||||    
T  36419490 agagttgttggaacatagt 36419508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 48 - 219
Target Start/End: Original strand, 36370513 - 36370684
Alignment:
Q  48 gttttatatcttcaccaagattcaaggctgaaaataattcatagagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcag 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  36370513 gttttatatcttcaccaagattcaaggctgaaaataattcatagagatctaaaagccagcaatgttctccttgatgctgaaatgaatcccaaaatctcag 36370612  T
Q  148 attttggtatggctagaatatttggagaagatgaaatccaagcaagaacaaaaagagtggtcggaacatagt 219  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36370613 attttggtatggctagaatatttggagaagatgaaattcaagcaagaacaaaaagagtggtcggaacatagt 36370684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 62 - 219
Target Start/End: Original strand, 36412312 - 36412469
Alignment:
Q  62 ccaagattcaaggctgaaaataattcatagagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggct 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36412312 ccaagattcaaggctgaaaataattcatagagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggct 36412411  T
Q  162 agaatatttggagaagatgaaatccaagcaagaacaaaaagagtggtcggaacatagt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36412412 agaatatttggagaagatgaaatccaagcaagaacaaaaagagtggtcggaacatagt 36412469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 36389482 - 36389701
Alignment:
Q  1 tggattgggtaaagcgttttgaaatcatttgtgggattgctcgaggtgttttatatcttcaccaagattcaaggctgaaaataattcatagagatctaaa 100  Q
    |||||||||  || ||||||||||| ||  |||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||| |||||    
T  36389482 tggattggggcaaacgttttgaaattat--gtgggattgctcgaggcgttttatatcttcatcaagattcaaggctgaaaatcattcatagagacctaaa 36389579  T
Q  101 agccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttgga---gaagatgaaatccaagcaagaaca 197  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||   || |||||||||||||||| ||||    
T  36389580 agccagcaatgttctccttgacgctgcaatgaaccctaaaatctcagattttggtatggctagaatatttggagacgatgatgaaatccaagcaataaca 36389679  T
Q  198 aaaagagtggtcggaacatagt 219  Q
    ||||||||||| ||||||||||    
T  36389680 aaaagagtggttggaacatagt 36389701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 36370446 - 36370491
Alignment:
Q  1 tggattgggtaaagcgttttgaaatcatttgtgggattgctcgagg 46  Q
    |||||||||| |||||||||||||| ||||||| ||||||||||||    
T  36370446 tggattgggttaagcgttttgaaattatttgtgtgattgctcgagg 36370491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 36437815 - 36437727
Alignment:
Q  84 attcatagagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttgg 172  Q
    |||||||||||  |||| |||||||||||  |  | ||| ||||| |||| || |||||  |||||||||||||||||||||| |||||    
T  36437815 attcatagagacttaaaggccagcaatgtcttgttggacactgcattgaacccaaaaattgcagattttggtatggctagaatgtttgg 36437727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 40823885 - 40823841
Alignment:
Q  130 tgaatcccaaaatctcagattttggtatggctagaatatttggag 174  Q
    ||||||| ||||| ||||| ||||||||||||||||| |||||||    
T  40823885 tgaatccaaaaatatcagactttggtatggctagaatctttggag 40823841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 173
Target Start/End: Complemental strand, 48476735 - 48476691
Alignment:
Q  129 atgaatcccaaaatctcagattttggtatggctagaatatttgga 173  Q
    |||||||| || || ||||||||||||||||||||||| ||||||    
T  48476735 atgaatcctaagatttcagattttggtatggctagaatttttgga 48476691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 154
Target Start/End: Complemental strand, 15697458 - 15697353
Alignment:
Q  49 ttttatatcttcaccaagattcaaggctgaaaataattcatagagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcaga 148  Q
    ||||||| ||||||||||||||  | || | | | || ||||||||||| ||||||||||||||||| || || | || ||||||||| ||||| |||||    
T  15697458 ttttataccttcaccaagattctcgacttagagttatccatagagatctgaaagccagcaatgttcttctggatgatgaaatgaatccgaaaatatcaga 15697359  T
Q  149 ttttgg 154  Q
    ||||||    
T  15697358 ttttgg 15697353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 15799924 - 15799843
Alignment:
Q  90 agagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttg 171  Q
    |||||||| ||||||||||||||||| || || | || ||||||||| ||||| |||||||||||  |||| |||| |||||    
T  15799924 agagatctgaaagccagcaatgttcttctggatgatgaaatgaatccaaaaatatcagattttggattggcaagaacatttg 15799843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 15722626 - 15722546
Alignment:
Q  91 gagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctagaatatttg 171  Q
    ||||||| ||||||||||| ||||| || |||  || ||||||||| ||||| |||||||||||| |||| |||| |||||    
T  15722626 gagatctgaaagccagcaacgttcttctggacagtgaaatgaatccaaaaatatcagattttggtttggcaagaaaatttg 15722546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 15805456 - 15805392
Alignment:
Q  90 agagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttgg 154  Q
    |||||||| ||||||||||||||||| || || | || ||||||||| ||||| |||||||||||    
T  15805456 agagatctgaaagccagcaatgttcttctagatgatgaaatgaatccaaaaatatcagattttgg 15805392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 172
Target Start/End: Complemental strand, 2662577 - 2662470
Alignment:
Q  65 agattcaaggctgaaaataattcatagagatctaaaagccagcaatgttctccttgacgctgcaatgaatcccaaaatctcagattttggtatggctaga 164  Q
    ||||||||| || | |||||||||||||||||||||||| |||||||||||  | || |  | ||||||||| ||||| || || ||||| ||||| |||    
T  2662577 agattcaagactaagaataattcatagagatctaaaagcaagcaatgttcttttagatggcgaaatgaatccaaaaatttctgactttggaatggcaaga 2662478  T
Q  165 atatttgg 172  Q
    || |||||    
T  2662477 atgtttgg 2662470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 172
Target Start/End: Complemental strand, 2682069 - 2682025
Alignment:
Q  128 aatgaatcccaaaatctcagattttggtatggctagaatatttgg 172  Q
    ||||||||| ||||| ||||| ||||| |||||||||||||||||    
T  2682069 aatgaatccaaaaatatcagactttgggatggctagaatatttgg 2682025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 166
Target Start/End: Original strand, 13855176 - 13855213
Alignment:
Q  129 atgaatcccaaaatctcagattttggtatggctagaat 166  Q
    |||||||||||||| |||||||||||||||||||||||    
T  13855176 atgaatcccaaaatttcagattttggtatggctagaat 13855213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 166
Target Start/End: Complemental strand, 8321 - 8284
Alignment:
Q  129 atgaatcccaaaatctcagattttggtatggctagaat 166  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  8321 atgaatcccaaaatttcagattttggcatggctagaat 8284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 166
Target Start/End: Original strand, 47607375 - 47607412
Alignment:
Q  129 atgaatcccaaaatctcagattttggtatggctagaat 166  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  47607375 atgaatcctaaaatctcagattttggcatggctagaat 47607412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 47287663 - 47287703
Alignment:
Q  132 aatcccaaaatctcagattttggtatggctagaatatttgg 172  Q
    ||||||||||| ||||||||||| ||||| |||||||||||    
T  47287663 aatcccaaaatttcagattttgggatggcaagaatatttgg 47287703  T

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Target: chr7 (Bit Score: 29; Significance: 0.0000003; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 20168134 - 20168090
Alignment:
Q  130 tgaatcccaaaatctcagattttggtatggctagaatatttggag 174  Q
    ||||||| ||||| ||||| ||||||||||||||||| |||||||    
T  20168134 tgaatccaaaaatatcagaatttggtatggctagaatctttggag 20168090  T

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Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 20231557 - 20231601
Alignment:
Q  130 tgaatcccaaaatctcagattttggtatggctagaatatttggag 174  Q
    ||||||| ||||| ||||| ||||||||||||||||| |||||||    
T  20231557 tgaatccaaaaatatcagactttggtatggctagaatctttggag 20231601  T

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Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 20243622 - 20243666
Alignment:
Q  130 tgaatcccaaaatctcagattttggtatggctagaatatttggag 174  Q
    ||||||| ||||| ||||| |||||| ||||||||||||||||||    
T  20243622 tgaatccaaaaatatcagactttggtctggctagaatatttggag 20243666  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 20264016 - 20264060
Alignment:
Q  130 tgaatcccaaaatctcagattttggtatggctagaatatttggag 174  Q
    ||||||| ||||| ||||| ||||||||||||||||| |||||||    
T  20264016 tgaatccaaaaatatcagactttggtatggctagaatctttggag 20264060  T

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Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 20279525 - 20279569
Alignment:
Q  130 tgaatcccaaaatctcagattttggtatggctagaatatttggag 174  Q
    ||||||| ||||| ||||| ||||||||||||||||| |||||||    
T  20279525 tgaatccaaaaatatcagactttggtatggctagaatctttggag 20279569  T

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Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 20289266 - 20289302
Alignment:
Q  130 tgaatcccaaaatctcagattttggtatggctagaat 166  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  20289266 tgaatcccaaaatatcagactttggtatggctagaat 20289302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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